Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93105.t1 | XP_013470408.1 | 97.1 | 378 | 11 | 0 | 1 | 378 | 107 | 484 | 7.20E-213 | 749.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93105.t1 | Q9LHE3 | 73.7 | 384 | 95 | 1 | 1 | 378 | 85 | 468 | 2.6e-171 | 602.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93105.t1 | A0A072VS01 | 97.1 | 378 | 11 | 0 | 1 | 378 | 107 | 484 | 5.2e-213 | 749.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049298 | MS.gene93105 | 0.826587 | 2.50E-54 | -1.69E-46 |
MS.gene04932 | MS.gene93105 | 0.81591 | 7.26E-52 | -1.69E-46 |
MS.gene050170 | MS.gene93105 | -0.832024 | 1.20E-55 | -1.69E-46 |
MS.gene050326 | MS.gene93105 | 0.822881 | 1.87E-53 | -1.69E-46 |
MS.gene050328 | MS.gene93105 | 0.812349 | 4.43E-51 | -1.69E-46 |
MS.gene050338 | MS.gene93105 | 0.851943 | 6.38E-61 | -1.69E-46 |
MS.gene050710 | MS.gene93105 | 0.847878 | 8.75E-60 | -1.69E-46 |
MS.gene05081 | MS.gene93105 | -0.805188 | 1.51E-49 | -1.69E-46 |
MS.gene051439 | MS.gene93105 | 0.851203 | 1.03E-60 | -1.69E-46 |
MS.gene051517 | MS.gene93105 | 0.804945 | 1.69E-49 | -1.69E-46 |
MS.gene051651 | MS.gene93105 | 0.8066 | 7.60E-50 | -1.69E-46 |
MS.gene051838 | MS.gene93105 | -0.830957 | 2.19E-55 | -1.69E-46 |
MS.gene052383 | MS.gene93105 | 0.80378 | 2.96E-49 | -1.69E-46 |
MS.gene052503 | MS.gene93105 | -0.802217 | 6.23E-49 | -1.69E-46 |
MS.gene052606 | MS.gene93105 | 0.833205 | 6.10E-56 | -1.69E-46 |
MS.gene052823 | MS.gene93105 | -0.803972 | 2.70E-49 | -1.69E-46 |
MS.gene052825 | MS.gene93105 | -0.805817 | 1.11E-49 | -1.69E-46 |
MS.gene053108 | MS.gene93105 | 0.814409 | 1.56E-51 | -1.69E-46 |
MS.gene053479 | MS.gene93105 | -0.811559 | 6.59E-51 | -1.69E-46 |
MS.gene053480 | MS.gene93105 | -0.803907 | 2.79E-49 | -1.69E-46 |
MS.gene053776 | MS.gene93105 | 0.801401 | 9.16E-49 | -1.69E-46 |
MS.gene054270 | MS.gene93105 | 0.804772 | 1.84E-49 | -1.69E-46 |
MS.gene054343 | MS.gene93105 | -0.812406 | 4.31E-51 | -1.69E-46 |
MS.gene054344 | MS.gene93105 | -0.831566 | 1.55E-55 | -1.69E-46 |
MS.gene054706 | MS.gene93105 | 0.811841 | 5.72E-51 | -1.69E-46 |
MS.gene05470 | MS.gene93105 | -0.81949 | 1.13E-52 | -1.69E-46 |
MS.gene054884 | MS.gene93105 | 0.827794 | 1.28E-54 | -1.69E-46 |
MS.gene054941 | MS.gene93105 | 0.849178 | 3.82E-60 | -1.69E-46 |
MS.gene055731 | MS.gene93105 | 0.808945 | 2.41E-50 | -1.69E-46 |
MS.gene055858 | MS.gene93105 | 0.808985 | 2.37E-50 | -1.69E-46 |
MS.gene05589 | MS.gene93105 | -0.834148 | 3.54E-56 | -1.69E-46 |
MS.gene056198 | MS.gene93105 | 0.801438 | 9.00E-49 | -1.69E-46 |
MS.gene056387 | MS.gene93105 | -0.865326 | 6.41E-65 | -1.69E-46 |
MS.gene05652 | MS.gene93105 | 0.835091 | 2.05E-56 | -1.69E-46 |
MS.gene056590 | MS.gene93105 | 0.808824 | 2.56E-50 | -1.69E-46 |
MS.gene056591 | MS.gene93105 | 0.805315 | 1.42E-49 | -1.69E-46 |
MS.gene056618 | MS.gene93105 | 0.849935 | 2.35E-60 | -1.69E-46 |
MS.gene056678 | MS.gene93105 | 0.808814 | 2.57E-50 | -1.69E-46 |
MS.gene056688 | MS.gene93105 | 0.823761 | 1.16E-53 | -1.69E-46 |
MS.gene056694 | MS.gene93105 | 0.827411 | 1.59E-54 | -1.69E-46 |
MS.gene056697 | MS.gene93105 | 0.846805 | 1.72E-59 | -1.69E-46 |
MS.gene057658 | MS.gene93105 | -0.813523 | 2.45E-51 | -1.69E-46 |
MS.gene057669 | MS.gene93105 | 0.813489 | 2.49E-51 | -1.69E-46 |
MS.gene057717 | MS.gene93105 | 0.862202 | 5.99E-64 | -1.69E-46 |
MS.gene058334 | MS.gene93105 | 0.803729 | 3.03E-49 | -1.69E-46 |
MS.gene058382 | MS.gene93105 | 0.831428 | 1.68E-55 | -1.69E-46 |
MS.gene058418 | MS.gene93105 | 0.818644 | 1.76E-52 | -1.69E-46 |
MS.gene058452 | MS.gene93105 | 0.830155 | 3.44E-55 | -1.69E-46 |
MS.gene058838 | MS.gene93105 | -0.818946 | 1.50E-52 | -1.69E-46 |
MS.gene059023 | MS.gene93105 | -0.801782 | 7.65E-49 | -1.69E-46 |
MS.gene05914 | MS.gene93105 | -0.813366 | 2.65E-51 | -1.69E-46 |
MS.gene05926 | MS.gene93105 | 0.868581 | 5.87E-66 | -1.69E-46 |
MS.gene059512 | MS.gene93105 | -0.805777 | 1.13E-49 | -1.69E-46 |
MS.gene05960 | MS.gene93105 | 0.870625 | 1.27E-66 | -1.69E-46 |
MS.gene060405 | MS.gene93105 | 0.865923 | 4.15E-65 | -1.69E-46 |
MS.gene061044 | MS.gene93105 | 0.832923 | 7.17E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene93105 | MS.gene029370 | PPI |
MS.gene029371 | MS.gene93105 | PPI |
MS.gene93105 | MS.gene071433 | PPI |
MS.gene93105 | MS.gene065102 | PPI |
MS.gene93105 | MS.gene76272 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93105.t1 | MTR_1g115210 | 97.090 | 378 | 11 | 0 | 1 | 378 | 107 | 484 | 0.0 | 750 |
MS.gene93105.t1 | MTR_1g039270 | 71.948 | 385 | 101 | 2 | 1 | 378 | 83 | 467 | 0.0 | 554 |
MS.gene93105.t1 | MTR_1g111350 | 50.789 | 380 | 177 | 4 | 1 | 378 | 94 | 465 | 5.07e-131 | 384 |
MS.gene93105.t1 | MTR_7g117430 | 49.608 | 383 | 187 | 5 | 1 | 378 | 101 | 482 | 5.83e-122 | 361 |
MS.gene93105.t1 | MTR_6g085010 | 44.924 | 394 | 196 | 6 | 1 | 380 | 104 | 490 | 7.85e-110 | 330 |
MS.gene93105.t1 | MTR_8g103880 | 38.547 | 358 | 211 | 6 | 20 | 373 | 96 | 448 | 4.75e-89 | 276 |
MS.gene93105.t1 | MTR_3g097150 | 38.381 | 383 | 212 | 10 | 6 | 377 | 74 | 443 | 3.34e-82 | 258 |
MS.gene93105.t1 | MTR_4g007740 | 36.776 | 397 | 219 | 10 | 4 | 379 | 91 | 476 | 5.17e-73 | 235 |
MS.gene93105.t1 | MTR_3g053710 | 39.106 | 358 | 195 | 10 | 37 | 378 | 114 | 464 | 8.13e-72 | 232 |
MS.gene93105.t1 | MTR_5g044770 | 36.932 | 352 | 202 | 11 | 39 | 379 | 85 | 427 | 1.66e-69 | 225 |
MS.gene93105.t1 | MTR_3g046300 | 36.000 | 375 | 203 | 7 | 32 | 377 | 89 | 455 | 2.76e-69 | 225 |
MS.gene93105.t1 | MTR_8g096990 | 34.026 | 385 | 235 | 11 | 6 | 379 | 52 | 428 | 9.23e-67 | 218 |
MS.gene93105.t1 | MTR_2g028190 | 33.251 | 406 | 225 | 14 | 3 | 377 | 58 | 448 | 1.18e-66 | 218 |
MS.gene93105.t1 | MTR_3g053980 | 39.944 | 358 | 196 | 8 | 32 | 378 | 134 | 483 | 1.18e-66 | 219 |
MS.gene93105.t1 | MTR_5g080890 | 35.537 | 363 | 195 | 11 | 39 | 379 | 85 | 430 | 2.90e-65 | 214 |
MS.gene93105.t1 | MTR_5g080960 | 35.813 | 363 | 194 | 11 | 39 | 379 | 85 | 430 | 2.21e-64 | 212 |
MS.gene93105.t1 | MTR_5g091130 | 33.661 | 407 | 239 | 10 | 1 | 377 | 145 | 550 | 3.78e-64 | 214 |
MS.gene93105.t1 | MTR_8g038280 | 34.551 | 356 | 210 | 11 | 39 | 379 | 85 | 432 | 1.17e-61 | 204 |
MS.gene93105.t1 | MTR_2g059460 | 32.990 | 388 | 225 | 12 | 10 | 379 | 33 | 403 | 7.50e-58 | 194 |
MS.gene93105.t1 | MTR_6g090290 | 34.197 | 386 | 234 | 9 | 8 | 379 | 54 | 433 | 3.53e-57 | 193 |
MS.gene93105.t1 | MTR_2g059490 | 34.637 | 358 | 214 | 12 | 40 | 382 | 58 | 410 | 6.21e-56 | 190 |
MS.gene93105.t1 | MTR_0036s0110 | 29.902 | 408 | 234 | 15 | 3 | 383 | 61 | 443 | 4.94e-55 | 187 |
MS.gene93105.t1 | MTR_2g067830 | 33.333 | 393 | 234 | 16 | 6 | 379 | 20 | 403 | 1.13e-54 | 186 |
MS.gene93105.t1 | MTR_5g038360 | 32.316 | 393 | 242 | 13 | 1 | 379 | 51 | 433 | 3.00e-54 | 185 |
MS.gene93105.t1 | MTR_0036s0070 | 30.909 | 385 | 233 | 12 | 10 | 379 | 57 | 423 | 4.33e-53 | 182 |
MS.gene93105.t1 | MTR_8g038310 | 32.134 | 389 | 227 | 12 | 2 | 379 | 48 | 410 | 4.48e-53 | 181 |
MS.gene93105.t1 | MTR_3g028120 | 33.799 | 358 | 213 | 12 | 38 | 379 | 86 | 435 | 4.53e-53 | 182 |
MS.gene93105.t1 | MTR_6g088760 | 32.425 | 367 | 220 | 12 | 1 | 347 | 46 | 404 | 1.05e-52 | 183 |
MS.gene93105.t1 | MTR_4g109760 | 33.994 | 353 | 206 | 11 | 41 | 379 | 56 | 395 | 3.18e-52 | 179 |
MS.gene93105.t1 | MTR_5g008150 | 32.376 | 383 | 236 | 11 | 12 | 379 | 35 | 409 | 3.16e-51 | 177 |
MS.gene93105.t1 | MTR_5g008070 | 33.518 | 361 | 215 | 10 | 37 | 383 | 78 | 427 | 4.69e-51 | 176 |
MS.gene93105.t1 | MTR_5g008110 | 32.958 | 355 | 216 | 11 | 39 | 379 | 66 | 412 | 1.91e-50 | 174 |
MS.gene93105.t1 | MTR_8g038250 | 32.670 | 352 | 202 | 9 | 39 | 379 | 85 | 412 | 7.56e-50 | 173 |
MS.gene93105.t1 | MTR_0036s0050 | 30.326 | 399 | 234 | 12 | 10 | 383 | 57 | 436 | 1.23e-49 | 173 |
MS.gene93105.t1 | MTR_0024s0040 | 32.295 | 353 | 216 | 12 | 41 | 379 | 64 | 407 | 3.82e-49 | 171 |
MS.gene93105.t1 | MTR_1g037630 | 34.971 | 346 | 207 | 9 | 38 | 376 | 90 | 424 | 3.15e-48 | 169 |
MS.gene93105.t1 | MTR_3g014290 | 34.971 | 346 | 207 | 9 | 38 | 376 | 78 | 412 | 4.44e-48 | 168 |
MS.gene93105.t1 | MTR_2g105300 | 31.552 | 393 | 219 | 17 | 6 | 379 | 20 | 381 | 5.61e-48 | 167 |
MS.gene93105.t1 | MTR_5g044570 | 31.486 | 397 | 219 | 18 | 2 | 379 | 46 | 408 | 6.06e-46 | 162 |
MS.gene93105.t1 | MTR_4g045857 | 40.092 | 217 | 117 | 6 | 40 | 243 | 58 | 274 | 8.19e-45 | 156 |
MS.gene93105.t1 | MTR_8g039540 | 35.652 | 345 | 207 | 10 | 38 | 376 | 94 | 429 | 2.87e-44 | 159 |
MS.gene93105.t1 | MTR_2g055840 | 31.180 | 356 | 213 | 10 | 41 | 370 | 14 | 363 | 1.14e-42 | 153 |
MS.gene93105.t1 | MTR_3g100500 | 32.584 | 356 | 222 | 9 | 30 | 376 | 87 | 433 | 4.02e-42 | 153 |
MS.gene93105.t1 | MTR_2g070430 | 29.396 | 381 | 219 | 12 | 38 | 380 | 85 | 453 | 4.34e-38 | 142 |
MS.gene93105.t1 | MTR_1g060750 | 26.650 | 394 | 235 | 15 | 7 | 383 | 21 | 377 | 1.40e-37 | 139 |
MS.gene93105.t1 | MTR_7g102750 | 28.019 | 414 | 253 | 14 | 1 | 379 | 36 | 439 | 2.72e-33 | 130 |
MS.gene93105.t1 | MTR_3g068000 | 29.491 | 373 | 213 | 17 | 43 | 376 | 76 | 437 | 8.87e-33 | 128 |
MS.gene93105.t1 | MTR_7g102750 | 28.462 | 390 | 234 | 14 | 1 | 355 | 36 | 415 | 5.83e-32 | 125 |
MS.gene93105.t1 | MTR_4g100990 | 28.000 | 400 | 218 | 16 | 40 | 376 | 74 | 466 | 7.47e-32 | 125 |
MS.gene93105.t1 | MTR_7g062360 | 30.667 | 375 | 204 | 18 | 43 | 376 | 62 | 421 | 5.97e-31 | 122 |
MS.gene93105.t1 | MTR_5g012490 | 26.434 | 401 | 228 | 15 | 40 | 379 | 74 | 468 | 8.47e-31 | 122 |
MS.gene93105.t1 | MTR_7g105850 | 28.608 | 388 | 214 | 14 | 39 | 377 | 89 | 462 | 3.41e-30 | 121 |
MS.gene93105.t1 | MTR_2g063110 | 25.850 | 441 | 257 | 14 | 1 | 377 | 71 | 505 | 1.27e-29 | 120 |
MS.gene93105.t1 | MTR_2g084550 | 28.852 | 357 | 198 | 16 | 39 | 357 | 76 | 414 | 5.38e-29 | 117 |
MS.gene93105.t1 | MTR_4g056420 | 27.419 | 372 | 229 | 15 | 38 | 379 | 75 | 435 | 2.15e-28 | 116 |
MS.gene93105.t1 | MTR_4g095270 | 26.722 | 363 | 232 | 12 | 38 | 384 | 78 | 422 | 2.95e-28 | 116 |
MS.gene93105.t1 | MTR_3g065160 | 27.198 | 364 | 223 | 15 | 43 | 379 | 77 | 425 | 3.28e-28 | 115 |
MS.gene93105.t1 | MTR_1g061940 | 27.845 | 413 | 254 | 14 | 1 | 379 | 41 | 443 | 3.96e-28 | 115 |
MS.gene93105.t1 | MTR_4g095270 | 26.722 | 363 | 232 | 12 | 38 | 384 | 78 | 422 | 4.82e-28 | 116 |
MS.gene93105.t1 | MTR_5g016260 | 26.039 | 361 | 237 | 11 | 38 | 384 | 86 | 430 | 1.21e-27 | 114 |
MS.gene93105.t1 | MTR_5g077850 | 27.273 | 363 | 228 | 15 | 43 | 379 | 84 | 436 | 1.28e-27 | 113 |
MS.gene93105.t1 | MTR_5g016260 | 25.762 | 361 | 238 | 11 | 38 | 384 | 86 | 430 | 2.33e-27 | 114 |
MS.gene93105.t1 | MTR_7g021510 | 25.526 | 380 | 232 | 13 | 32 | 375 | 64 | 428 | 7.48e-27 | 111 |
MS.gene93105.t1 | MTR_5g008090 | 29.967 | 307 | 184 | 11 | 92 | 379 | 17 | 311 | 1.41e-26 | 108 |
MS.gene93105.t1 | MTR_1g078240 | 25.995 | 377 | 234 | 14 | 32 | 375 | 61 | 425 | 1.30e-25 | 108 |
MS.gene93105.t1 | MTR_7g080230 | 25.532 | 376 | 235 | 14 | 32 | 375 | 63 | 425 | 2.88e-25 | 107 |
MS.gene93105.t1 | MTR_1g078240 | 28.308 | 325 | 198 | 13 | 32 | 331 | 61 | 375 | 6.39e-25 | 105 |
MS.gene93105.t1 | MTR_1g078240 | 25.995 | 377 | 233 | 15 | 32 | 375 | 61 | 424 | 1.63e-24 | 105 |
MS.gene93105.t1 | MTR_5g022880 | 26.110 | 383 | 212 | 16 | 41 | 383 | 113 | 464 | 1.77e-22 | 99.4 |
MS.gene93105.t1 | MTR_8g094590 | 24.798 | 371 | 230 | 15 | 39 | 379 | 72 | 423 | 1.65e-21 | 95.9 |
MS.gene93105.t1 | MTR_6g084710 | 25.238 | 420 | 249 | 20 | 2 | 375 | 145 | 545 | 1.82e-21 | 96.7 |
MS.gene93105.t1 | MTR_8g075010 | 26.133 | 375 | 220 | 14 | 41 | 382 | 101 | 451 | 2.34e-21 | 95.9 |
MS.gene93105.t1 | MTR_5g077920 | 26.625 | 323 | 206 | 13 | 43 | 342 | 71 | 385 | 2.39e-20 | 92.4 |
MS.gene93105.t1 | MTR_6g084710 | 26.871 | 294 | 183 | 12 | 2 | 273 | 145 | 428 | 2.49e-20 | 92.8 |
MS.gene93105.t1 | MTR_3g096930 | 25.067 | 375 | 223 | 15 | 39 | 379 | 83 | 433 | 3.53e-20 | 92.0 |
MS.gene93105.t1 | MTR_8g075090 | 27.446 | 368 | 208 | 20 | 41 | 375 | 113 | 454 | 4.86e-20 | 92.0 |
MS.gene93105.t1 | MTR_8g075090 | 27.446 | 368 | 208 | 20 | 41 | 375 | 113 | 454 | 5.34e-20 | 91.7 |
MS.gene93105.t1 | MTR_8g094590 | 28.175 | 252 | 149 | 10 | 39 | 276 | 72 | 305 | 9.83e-20 | 89.4 |
MS.gene93105.t1 | MTR_5g061690 | 25.564 | 399 | 250 | 14 | 1 | 375 | 69 | 444 | 1.46e-19 | 90.5 |
MS.gene93105.t1 | MTR_8g094590 | 28.175 | 252 | 149 | 10 | 39 | 276 | 72 | 305 | 2.20e-19 | 89.4 |
MS.gene93105.t1 | MTR_8g075090 | 27.597 | 308 | 174 | 16 | 41 | 320 | 113 | 399 | 2.74e-18 | 86.7 |
MS.gene93105.t1 | MTR_2g022450 | 24.747 | 396 | 223 | 16 | 35 | 375 | 35 | 410 | 8.71e-18 | 84.7 |
MS.gene93105.t1 | MTR_4g023650 | 25.581 | 387 | 224 | 19 | 31 | 376 | 52 | 415 | 4.22e-17 | 82.8 |
MS.gene93105.t1 | MTR_1g029810 | 25.203 | 369 | 224 | 15 | 39 | 375 | 56 | 404 | 5.10e-17 | 82.4 |
MS.gene93105.t1 | MTR_1g029810 | 25.203 | 369 | 224 | 15 | 39 | 375 | 56 | 404 | 6.09e-17 | 82.4 |
MS.gene93105.t1 | MTR_3g006820 | 23.575 | 386 | 245 | 17 | 26 | 379 | 44 | 411 | 2.82e-16 | 80.1 |
MS.gene93105.t1 | MTR_3g087780 | 24.654 | 361 | 231 | 11 | 41 | 375 | 100 | 445 | 4.23e-16 | 80.1 |
MS.gene93105.t1 | MTR_4g023630 | 24.416 | 385 | 231 | 17 | 31 | 376 | 52 | 415 | 6.72e-16 | 79.3 |
MS.gene93105.t1 | MTR_4g117090 | 23.342 | 407 | 223 | 17 | 40 | 375 | 49 | 437 | 8.27e-13 | 69.7 |
MS.gene93105.t1 | MTR_7g080230 | 23.256 | 344 | 213 | 15 | 72 | 383 | 33 | 357 | 4.20e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93105.t1 | AT3G20015 | 73.698 | 384 | 95 | 1 | 1 | 378 | 85 | 468 | 0.0 | 557 |
MS.gene93105.t1 | AT3G18490 | 50.505 | 396 | 175 | 4 | 1 | 378 | 106 | 498 | 2.08e-132 | 389 |
MS.gene93105.t1 | AT1G25510 | 47.837 | 393 | 186 | 4 | 1 | 378 | 93 | 481 | 7.98e-127 | 374 |
MS.gene93105.t1 | AT1G01300 | 49.096 | 387 | 186 | 5 | 1 | 377 | 96 | 481 | 3.53e-120 | 357 |
MS.gene93105.t1 | AT3G61820 | 47.074 | 393 | 189 | 6 | 1 | 375 | 87 | 478 | 3.90e-116 | 347 |
MS.gene93105.t1 | AT5G10770 | 39.130 | 391 | 218 | 9 | 1 | 378 | 88 | 471 | 4.20e-85 | 266 |
MS.gene93105.t1 | AT5G10760 | 38.120 | 383 | 223 | 7 | 1 | 378 | 89 | 462 | 1.90e-73 | 236 |
MS.gene93105.t1 | AT2G03200 | 36.944 | 360 | 205 | 10 | 37 | 379 | 103 | 457 | 2.82e-73 | 236 |
MS.gene93105.t1 | AT5G33340 | 35.623 | 393 | 231 | 12 | 1 | 379 | 49 | 433 | 2.36e-66 | 217 |
MS.gene93105.t1 | AT1G79720 | 35.279 | 394 | 223 | 7 | 4 | 375 | 94 | 477 | 6.81e-66 | 217 |
MS.gene93105.t1 | AT1G64830 | 35.115 | 393 | 230 | 13 | 2 | 379 | 45 | 427 | 1.47e-63 | 209 |
MS.gene93105.t1 | AT3G25700 | 33.867 | 375 | 220 | 11 | 28 | 375 | 71 | 444 | 9.80e-61 | 202 |
MS.gene93105.t1 | AT3G59080 | 32.000 | 400 | 247 | 7 | 2 | 377 | 131 | 529 | 4.22e-58 | 198 |
MS.gene93105.t1 | AT2G42980 | 33.085 | 402 | 241 | 11 | 2 | 377 | 122 | 521 | 2.69e-57 | 196 |
MS.gene93105.t1 | AT1G09750 | 33.247 | 385 | 236 | 10 | 4 | 377 | 71 | 445 | 1.13e-56 | 192 |
MS.gene93105.t1 | AT2G28040 | 32.303 | 356 | 204 | 9 | 40 | 382 | 55 | 386 | 7.80e-55 | 185 |
MS.gene93105.t1 | AT2G28040 | 32.303 | 356 | 204 | 9 | 40 | 382 | 64 | 395 | 1.15e-54 | 185 |
MS.gene93105.t1 | AT3G54400 | 33.913 | 345 | 213 | 8 | 38 | 376 | 85 | 420 | 4.10e-54 | 184 |
MS.gene93105.t1 | AT2G28010 | 31.218 | 394 | 227 | 10 | 1 | 382 | 35 | 396 | 4.17e-52 | 179 |
MS.gene93105.t1 | AT2G28030 | 32.203 | 354 | 206 | 9 | 41 | 382 | 61 | 392 | 1.70e-51 | 177 |
MS.gene93105.t1 | AT3G59080 | 31.139 | 395 | 221 | 8 | 2 | 377 | 131 | 493 | 3.44e-50 | 176 |
MS.gene93105.t1 | AT1G31450 | 29.923 | 391 | 246 | 12 | 10 | 379 | 57 | 440 | 1.51e-47 | 167 |
MS.gene93105.t1 | AT2G28220 | 31.198 | 359 | 207 | 12 | 41 | 382 | 67 | 402 | 3.88e-46 | 163 |
MS.gene93105.t1 | AT2G35615 | 28.753 | 393 | 253 | 13 | 10 | 379 | 54 | 442 | 4.95e-45 | 161 |
MS.gene93105.t1 | AT5G07030 | 33.238 | 349 | 213 | 9 | 38 | 376 | 112 | 450 | 5.18e-45 | 161 |
MS.gene93105.t1 | AT4G30040 | 31.503 | 346 | 207 | 11 | 41 | 367 | 85 | 419 | 2.00e-41 | 151 |
MS.gene93105.t1 | AT2G28225 | 29.096 | 354 | 212 | 11 | 41 | 379 | 67 | 396 | 2.39e-41 | 150 |
MS.gene93105.t1 | AT2G23945 | 31.073 | 354 | 203 | 15 | 41 | 367 | 96 | 435 | 9.63e-39 | 144 |
MS.gene93105.t1 | AT3G12700 | 28.354 | 395 | 253 | 13 | 4 | 378 | 74 | 458 | 1.47e-34 | 133 |
MS.gene93105.t1 | AT3G02740 | 28.532 | 361 | 221 | 14 | 41 | 375 | 10 | 359 | 3.21e-34 | 131 |
MS.gene93105.t1 | AT3G02740 | 28.650 | 363 | 222 | 14 | 39 | 375 | 83 | 434 | 3.52e-34 | 132 |
MS.gene93105.t1 | AT4G30030 | 30.612 | 343 | 202 | 14 | 41 | 364 | 78 | 403 | 4.30e-34 | 131 |
MS.gene93105.t1 | AT2G36670 | 30.649 | 385 | 223 | 15 | 29 | 379 | 82 | 456 | 8.23e-34 | 131 |
MS.gene93105.t1 | AT2G36670 | 30.245 | 367 | 218 | 14 | 41 | 379 | 34 | 390 | 2.23e-33 | 129 |
MS.gene93105.t1 | AT2G36670 | 30.245 | 367 | 218 | 14 | 41 | 379 | 34 | 390 | 2.23e-33 | 129 |
MS.gene93105.t1 | AT2G36670 | 30.245 | 367 | 218 | 14 | 41 | 379 | 105 | 461 | 2.82e-33 | 130 |
MS.gene93105.t1 | AT2G39710 | 29.867 | 375 | 211 | 17 | 43 | 378 | 67 | 428 | 3.97e-33 | 129 |
MS.gene93105.t1 | AT5G43100 | 28.291 | 357 | 220 | 13 | 38 | 375 | 73 | 412 | 3.16e-32 | 127 |
MS.gene93105.t1 | AT5G43100 | 28.291 | 357 | 220 | 13 | 38 | 375 | 73 | 412 | 4.05e-32 | 128 |
MS.gene93105.t1 | AT5G36260 | 27.660 | 329 | 202 | 12 | 39 | 344 | 76 | 391 | 1.91e-30 | 122 |
MS.gene93105.t1 | AT1G66180 | 27.596 | 366 | 232 | 13 | 38 | 379 | 69 | 425 | 6.12e-30 | 119 |
MS.gene93105.t1 | AT5G22850 | 28.312 | 385 | 230 | 18 | 3 | 357 | 49 | 417 | 3.01e-29 | 119 |
MS.gene93105.t1 | AT5G02190 | 29.491 | 373 | 203 | 19 | 50 | 377 | 82 | 439 | 2.44e-28 | 115 |
MS.gene93105.t1 | AT1G05840 | 27.493 | 371 | 220 | 15 | 39 | 375 | 78 | 433 | 2.80e-28 | 115 |
MS.gene93105.t1 | AT5G37540 | 27.222 | 360 | 227 | 13 | 43 | 375 | 82 | 433 | 9.86e-28 | 114 |
MS.gene93105.t1 | AT3G50050 | 27.297 | 370 | 222 | 13 | 38 | 384 | 90 | 435 | 1.11e-26 | 112 |
MS.gene93105.t1 | AT1G65240 | 26.444 | 329 | 203 | 13 | 39 | 344 | 72 | 384 | 3.37e-26 | 109 |
MS.gene93105.t1 | AT5G45120 | 24.939 | 413 | 240 | 16 | 30 | 379 | 72 | 477 | 1.76e-25 | 107 |
MS.gene93105.t1 | AT1G49050 | 25.416 | 421 | 241 | 19 | 7 | 379 | 172 | 567 | 2.38e-24 | 105 |
MS.gene93105.t1 | AT1G49050 | 28.146 | 302 | 181 | 13 | 7 | 287 | 172 | 458 | 3.31e-24 | 103 |
MS.gene93105.t1 | AT3G25700 | 38.926 | 149 | 77 | 4 | 28 | 162 | 71 | 219 | 3.88e-24 | 102 |
MS.gene93105.t1 | AT1G08210 | 27.642 | 369 | 228 | 14 | 39 | 379 | 82 | 439 | 6.87e-24 | 103 |
MS.gene93105.t1 | AT1G77480 | 27.805 | 410 | 231 | 20 | 5 | 379 | 39 | 418 | 7.89e-24 | 102 |
MS.gene93105.t1 | AT1G08210 | 27.642 | 369 | 228 | 14 | 39 | 379 | 116 | 473 | 7.90e-24 | 103 |
MS.gene93105.t1 | AT3G52500 | 27.202 | 386 | 223 | 15 | 39 | 376 | 88 | 463 | 9.32e-24 | 102 |
MS.gene93105.t1 | AT1G77480 | 27.805 | 410 | 231 | 20 | 5 | 379 | 39 | 418 | 1.16e-23 | 102 |
MS.gene93105.t1 | AT1G08210 | 27.642 | 369 | 228 | 14 | 39 | 379 | 130 | 487 | 1.32e-23 | 102 |
MS.gene93105.t1 | AT1G49050 | 25.065 | 387 | 220 | 18 | 41 | 379 | 30 | 394 | 1.39e-23 | 101 |
MS.gene93105.t1 | AT4G12920 | 26.425 | 386 | 227 | 12 | 6 | 367 | 22 | 374 | 6.69e-23 | 99.4 |
MS.gene93105.t1 | AT1G08210 | 28.829 | 333 | 199 | 13 | 39 | 344 | 82 | 403 | 7.74e-23 | 100 |
MS.gene93105.t1 | AT3G51350 | 26.301 | 365 | 207 | 15 | 41 | 375 | 102 | 434 | 3.34e-21 | 95.5 |
MS.gene93105.t1 | AT2G17760 | 25.824 | 364 | 226 | 15 | 41 | 379 | 104 | 448 | 4.19e-20 | 92.4 |
MS.gene93105.t1 | AT3G51340 | 28.065 | 367 | 205 | 18 | 41 | 375 | 103 | 442 | 1.38e-19 | 90.9 |
MS.gene93105.t1 | AT4G35880 | 24.595 | 370 | 228 | 13 | 41 | 382 | 107 | 453 | 1.70e-19 | 90.5 |
MS.gene93105.t1 | AT4G16563 | 26.952 | 397 | 203 | 17 | 58 | 376 | 100 | 487 | 3.76e-19 | 89.4 |
MS.gene93105.t1 | AT4G35880 | 25.656 | 343 | 204 | 13 | 41 | 355 | 107 | 426 | 1.80e-18 | 87.0 |
MS.gene93105.t1 | AT1G44130 | 26.247 | 381 | 212 | 18 | 39 | 379 | 47 | 398 | 3.76e-18 | 85.9 |
MS.gene93105.t1 | AT4G33490 | 25.266 | 376 | 223 | 15 | 39 | 379 | 58 | 410 | 4.19e-18 | 85.9 |
MS.gene93105.t1 | AT3G51340 | 27.707 | 314 | 174 | 14 | 41 | 325 | 103 | 392 | 1.15e-17 | 84.3 |
MS.gene93105.t1 | AT4G33490 | 29.930 | 284 | 156 | 13 | 13 | 275 | 27 | 288 | 2.83e-17 | 83.2 |
MS.gene93105.t1 | AT3G42550 | 23.810 | 378 | 213 | 16 | 1 | 357 | 43 | 366 | 1.07e-16 | 81.6 |
MS.gene93105.t1 | AT5G10080 | 24.129 | 402 | 251 | 15 | 13 | 378 | 68 | 451 | 1.64e-16 | 81.6 |
MS.gene93105.t1 | AT3G51360 | 23.925 | 372 | 236 | 14 | 35 | 379 | 93 | 444 | 6.72e-16 | 79.7 |
MS.gene93105.t1 | AT3G51360 | 23.873 | 377 | 240 | 14 | 35 | 384 | 83 | 439 | 7.86e-16 | 79.3 |
MS.gene93105.t1 | AT3G51360 | 24.713 | 348 | 215 | 14 | 35 | 355 | 93 | 420 | 1.19e-15 | 78.6 |
MS.gene93105.t1 | AT3G51360 | 24.839 | 310 | 189 | 12 | 35 | 320 | 93 | 382 | 1.54e-15 | 78.2 |
MS.gene93105.t1 | AT3G51360 | 24.713 | 348 | 215 | 14 | 35 | 355 | 83 | 410 | 1.89e-15 | 77.8 |
MS.gene93105.t1 | AT3G51360 | 23.720 | 371 | 236 | 14 | 41 | 384 | 5 | 355 | 1.97e-15 | 77.8 |
MS.gene93105.t1 | AT3G51340 | 26.804 | 291 | 163 | 13 | 41 | 302 | 103 | 372 | 2.21e-15 | 77.4 |
MS.gene93105.t1 | AT3G51360 | 24.839 | 310 | 189 | 12 | 35 | 320 | 83 | 372 | 2.30e-15 | 77.4 |
MS.gene93105.t1 | AT3G51340 | 26.804 | 291 | 163 | 13 | 41 | 302 | 103 | 372 | 2.69e-15 | 77.8 |
MS.gene93105.t1 | AT3G51360 | 25.000 | 264 | 156 | 10 | 35 | 276 | 93 | 336 | 3.13e-13 | 70.5 |
MS.gene93105.t1 | AT5G48430 | 28.448 | 232 | 147 | 7 | 159 | 375 | 161 | 388 | 7.56e-13 | 69.7 |
Find 154 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTCGGGCAGTGACATTATT+TGG | 0.112279 | 1.1:+80748598 | MS.gene93105:CDS |
GGCTTTCGGGTCTTGGAGTT+GGG | 0.185714 | 1.1:+80749108 | MS.gene93105:CDS |
TTCGGGTCGGGTGTGGTTTC+GGG | 0.195700 | 1.1:+80748498 | MS.gene93105:CDS |
GCATTTGCTCCTTCTTCTTC+AGG | 0.218132 | 1.1:+80749449 | MS.gene93105:CDS |
AATGGATACTCCTGATGTTT+TGG | 0.222815 | 1.1:-80749285 | None:intergenic |
GTTCGGGTCGGGTGTGGTTT+CGG | 0.228106 | 1.1:+80748497 | MS.gene93105:CDS |
GCCGGCTTACAATGCATTTC+GGG | 0.244466 | 1.1:+80749232 | MS.gene93105:CDS |
GGTATGTTTGTTGGAGCAGC+TGG | 0.262458 | 1.1:+80748885 | MS.gene93105:CDS |
TCATCTGGGTCGCTAGAATT+TGG | 0.263511 | 1.1:+80749008 | MS.gene93105:CDS |
TGCCGTTATGAGGTTTCTTA+TGG | 0.268217 | 1.1:+80748762 | MS.gene93105:CDS |
CGCCGGCTTACAATGCATTT+CGG | 0.291370 | 1.1:+80749231 | MS.gene93105:CDS |
GGATGGAGCTAATGGGTATA+TGG | 0.294523 | 1.1:+80749520 | MS.gene93105:CDS |
TATATCGGGCTTTCGGGTCT+TGG | 0.310043 | 1.1:+80749101 | MS.gene93105:CDS |
ATCGTACTATATAGGATAAA+TGG | 0.314844 | 1.1:+80749701 | MS.gene93105:intron |
GGGCTTTCGGGTCTTGGAGT+TGG | 0.316663 | 1.1:+80749107 | MS.gene93105:CDS |
CGCCAGTCTGACCACCTAAT+TGG | 0.318952 | 1.1:-80748947 | None:intergenic |
GCAGCTGGGTTGTTGGGTCT+TGG | 0.325606 | 1.1:+80748900 | MS.gene93105:CDS |
TCTTCAGGACTTTCCATCAT+AGG | 0.325784 | 1.1:+80749464 | MS.gene93105:CDS |
AAACGGGTTTGTGACGGTTC+GGG | 0.329915 | 1.1:+80749328 | MS.gene93105:CDS |
AAATTTCAATCCCTTCTTGC+TGG | 0.331540 | 1.1:-80749493 | None:intergenic |
GAATGGAGAGAGATTCTAAA+AGG | 0.332342 | 1.1:+80748421 | None:intergenic |
TTGCTGGATGTTTCCTATGA+TGG | 0.341457 | 1.1:-80749477 | None:intergenic |
AAATGAATTGGGTGAGGGAG+GGG | 0.345584 | 1.1:+80749169 | MS.gene93105:CDS |
ACCCGAGAAATAAAATGATA+TGG | 0.346874 | 1.1:-80749357 | None:intergenic |
GCTTTCGGGTCTTGGAGTTG+GGG | 0.348212 | 1.1:+80749109 | MS.gene93105:CDS |
CCAATACGTGGTTATTGATT+CGG | 0.350961 | 1.1:+80748581 | MS.gene93105:CDS |
ATTTCAGTGGATGGAGCTAA+TGG | 0.353637 | 1.1:+80749512 | MS.gene93105:CDS |
GCTAATGGGTATATGGGATT+TGG | 0.357251 | 1.1:+80749527 | MS.gene93105:CDS |
GGGTTGTTGGGTCTTGGAAG+TGG | 0.359095 | 1.1:+80748906 | MS.gene93105:CDS |
CTTTCGGGTCTTGGAGTTGG+GGG | 0.359398 | 1.1:+80749110 | MS.gene93105:CDS |
GACACATGTTATGATTTAAA+CGG | 0.361043 | 1.1:+80749311 | MS.gene93105:CDS |
GAGCCCGTGGGTTATGAATC+AGG | 0.367672 | 1.1:-80749067 | None:intergenic |
TTCGGGCAGTGACATTATTT+GGG | 0.368954 | 1.1:+80748599 | MS.gene93105:CDS |
TAGTTATTGTTTAGTGAGTC+GGG | 0.376613 | 1.1:+80748977 | MS.gene93105:CDS |
CAATACGTGGTTATTGATTC+GGG | 0.383620 | 1.1:+80748582 | MS.gene93105:CDS |
GTCGGGTGTGGTTTCGGGTA+TGG | 0.397951 | 1.1:+80748503 | MS.gene93105:CDS |
GGTTGTTGGGTCTTGGAAGT+GGG | 0.398428 | 1.1:+80748907 | MS.gene93105:CDS |
TAAACGGGTTTGTGACGGTT+CGG | 0.403107 | 1.1:+80749327 | MS.gene93105:CDS |
GCCGTTATGAGGTTTCTTAT+GGG | 0.404335 | 1.1:+80748763 | MS.gene93105:CDS |
AGTCGGGGCACTGAATCATC+TGG | 0.406241 | 1.1:+80748993 | MS.gene93105:CDS |
ACACATGTTATGATTTAAAC+GGG | 0.407880 | 1.1:+80749312 | MS.gene93105:CDS |
GTTGGAGCAGCTGGGTTGTT+GGG | 0.408232 | 1.1:+80748894 | MS.gene93105:CDS |
GGGGTTGAGGGTTCCTATAT+CGG | 0.418943 | 1.1:+80749130 | MS.gene93105:CDS |
TGTTGGAGCAGCTGGGTTGT+TGG | 0.420595 | 1.1:+80748893 | MS.gene93105:CDS |
TGCCCTTGAGACTGTTACAT+TGG | 0.427294 | 1.1:+80748812 | MS.gene93105:CDS |
GGTATGAAACAGAGGAGTTC+GGG | 0.428364 | 1.1:+80748481 | MS.gene93105:CDS |
GGAGAGTATTTCGTAAGAAT+AGG | 0.441186 | 1.1:+80748537 | MS.gene93105:CDS |
AGGAACCAGGGTATGTTTGT+TGG | 0.444845 | 1.1:+80748876 | MS.gene93105:CDS |
CGGGTGTGGGCATAGGAACC+AGG | 0.446262 | 1.1:+80748863 | MS.gene93105:CDS |
TTAGTTATTGTTTAGTGAGT+CGG | 0.448984 | 1.1:+80748976 | MS.gene93105:CDS |
CGGCGAATCGCCGGTAGCGT+CGG | 0.452344 | 1.1:+80748459 | MS.gene93105:CDS |
TATGAGGTTTCTTATGGGGA+TGG | 0.454223 | 1.1:+80748768 | MS.gene93105:CDS |
GTGATCCGAAACGTGGCTAT+CGG | 0.454470 | 1.1:+80748843 | MS.gene93105:CDS |
CGGTGCCTGTGGGTGCTTCG+TGG | 0.456663 | 1.1:+80749039 | MS.gene93105:CDS |
GCCCTTGAGACTGTTACATT+GGG | 0.458217 | 1.1:+80748813 | MS.gene93105:CDS |
CGAAACGTGGCTATCGGGTG+TGG | 0.461598 | 1.1:+80748849 | MS.gene93105:CDS |
CCGAATCAATAACCACGTAT+TGG | 0.463017 | 1.1:-80748581 | None:intergenic |
GCCGTTGTGCGGCGAATCGC+CGG | 0.464829 | 1.1:+80748450 | MS.gene93105:CDS |
GGGGATTCTTCATCTTATGC+TGG | 0.467858 | 1.1:+80748678 | MS.gene93105:CDS |
GCTAGAATTTGGACGAGAAT+CGG | 0.468088 | 1.1:+80749019 | MS.gene93105:CDS |
GGGTATGAAACAGAGGAGTT+CGG | 0.473494 | 1.1:+80748480 | MS.gene93105:CDS |
TGATCCGAAACGTGGCTATC+GGG | 0.475223 | 1.1:+80748844 | MS.gene93105:CDS |
GTCGGATTGGTGATAACATT+GGG | 0.477208 | 1.1:-80748640 | None:intergenic |
GGCGAATCGCCGGTAGCGTC+GGG | 0.478355 | 1.1:+80748460 | MS.gene93105:CDS |
ATGAGGTTTCTTATGGGGAT+GGG | 0.479148 | 1.1:+80748769 | MS.gene93105:CDS |
GATGGAGCTAATGGGTATAT+GGG | 0.482882 | 1.1:+80749521 | MS.gene93105:CDS |
TGAAGGGAGGTGCCGTTATG+AGG | 0.492322 | 1.1:+80748752 | MS.gene93105:CDS |
TAAATGAATTGGGTGAGGGA+GGG | 0.493214 | 1.1:+80749168 | MS.gene93105:CDS |
TGGCTATCGGGTGTGGGCAT+AGG | 0.493489 | 1.1:+80748856 | MS.gene93105:CDS |
TTTCGGGTCTTGGAGTTGGG+GGG | 0.497028 | 1.1:+80749111 | MS.gene93105:CDS |
GGTGCCTGTGGGTGCTTCGT+GGG | 0.499303 | 1.1:+80749040 | MS.gene93105:CDS |
TGGTGATAACATTGGGTACA+TGG | 0.501291 | 1.1:-80748633 | None:intergenic |
TTTCAGTGGATGGAGCTAAT+GGG | 0.503081 | 1.1:+80749513 | MS.gene93105:CDS |
GAAACAGAGGAGTTCGGGTC+GGG | 0.503157 | 1.1:+80748486 | MS.gene93105:CDS |
GGGATTGAAATTTCAGTGGA+TGG | 0.503329 | 1.1:+80749503 | MS.gene93105:CDS |
CTAGCTGGAAGGGTCAATAT+AGG | 0.505927 | 1.1:-80749383 | None:intergenic |
TATTTCGTAAGAATAGGAGT+TGG | 0.506635 | 1.1:+80748543 | MS.gene93105:CDS |
AGAGGAGTTCGGGTCGGGTG+TGG | 0.509324 | 1.1:+80748491 | MS.gene93105:CDS |
GGCCAATTAGGTGGTCAGAC+TGG | 0.513423 | 1.1:+80748945 | MS.gene93105:CDS |
GGAGGGGTGGTCATGGACAC+CGG | 0.514573 | 1.1:+80749185 | MS.gene93105:CDS |
CACACCCGATAGCCACGTTT+CGG | 0.514707 | 1.1:-80748848 | None:intergenic |
GGGTGAGGGAGGGGTGGTCA+TGG | 0.515063 | 1.1:+80749178 | MS.gene93105:CDS |
TCGGTTAAATGAATTGGGTG+AGG | 0.515639 | 1.1:+80749163 | MS.gene93105:CDS |
TTAAATGAATTGGGTGAGGG+AGG | 0.517316 | 1.1:+80749167 | MS.gene93105:CDS |
GGAATTAAGAAGTTCCTAGC+TGG | 0.517708 | 1.1:-80749398 | None:intergenic |
GCATAAGATGAAGAATCCCC+CGG | 0.520903 | 1.1:-80748675 | None:intergenic |
GAGAAATAAAATGATATGGT+TGG | 0.523017 | 1.1:-80749353 | None:intergenic |
GGGATGGGTCCTATACTAAA+GGG | 0.523693 | 1.1:+80748784 | MS.gene93105:CDS |
CCGTTATGAGGTTTCTTATG+GGG | 0.528759 | 1.1:+80748764 | MS.gene93105:CDS |
TGTAGCCGTGTGGAGAATGC+AGG | 0.531669 | 1.1:+80748723 | MS.gene93105:CDS |
CGGTTAAATGAATTGGGTGA+GGG | 0.533268 | 1.1:+80749164 | MS.gene93105:CDS |
TCCCGAAATGCATTGTAAGC+CGG | 0.534505 | 1.1:-80749233 | None:intergenic |
TAACCTCGTCACGGCAGTGC+CGG | 0.534510 | 1.1:-80749204 | None:intergenic |
TTTCCCTGATTCATAACCCA+CGG | 0.537283 | 1.1:+80749063 | MS.gene93105:CDS |
TGAATTGGGTGAGGGAGGGG+TGG | 0.537828 | 1.1:+80749172 | MS.gene93105:CDS |
GGGGATGGGTCCTATACTAA+AGG | 0.538590 | 1.1:+80748783 | MS.gene93105:CDS |
GGCAAGTGTCCCTTTAGTAT+AGG | 0.540324 | 1.1:-80748793 | None:intergenic |
CTTGAGACTGTTACATTGGG+AGG | 0.541400 | 1.1:+80748816 | MS.gene93105:CDS |
TCGGGTATGGAGCAAGGAAG+TGG | 0.542447 | 1.1:+80748516 | MS.gene93105:CDS |
ACCGGCGATTCGCCGCACAA+CGG | 0.545210 | 1.1:-80748451 | None:intergenic |
ACAAACCTACCCAAAACATC+AGG | 0.549290 | 1.1:+80749275 | MS.gene93105:CDS |
TAGGAAACATCCAGCAAGAA+GGG | 0.550149 | 1.1:+80749483 | MS.gene93105:CDS |
GAAACCCACGAAGCACCCAC+AGG | 0.551071 | 1.1:-80749044 | None:intergenic |
GGTCGGATTGGTGATAACAT+TGG | 0.551981 | 1.1:-80748641 | None:intergenic |
CTTAATTCCAGTGGATAGTG+TGG | 0.552435 | 1.1:+80749412 | MS.gene93105:CDS |
GTGGTTTCGGGTATGGAGCA+AGG | 0.556095 | 1.1:+80748510 | MS.gene93105:CDS |
TCTTATGCTGGTGTGTCTTG+CGG | 0.561796 | 1.1:+80748690 | MS.gene93105:CDS |
TTAAGAAGTTCCTAGCTGGA+AGG | 0.562288 | 1.1:-80749394 | None:intergenic |
TTCCCTGATTCATAACCCAC+GGG | 0.562661 | 1.1:+80749064 | MS.gene93105:CDS |
CTCCCAATGTAACAGTCTCA+AGG | 0.565490 | 1.1:-80748815 | None:intergenic |
ATGGAAAGTCCTGAAGAAGA+AGG | 0.565827 | 1.1:-80749458 | None:intergenic |
CTATATTGACCCTTCCAGCT+AGG | 0.565963 | 1.1:+80749384 | MS.gene93105:CDS |
AATGGAGAGAGATTCTAAAA+GGG | 0.567636 | 1.1:+80748422 | None:intergenic |
ATTGGGTACATGGTTGACAC+TGG | 0.572469 | 1.1:-80748623 | None:intergenic |
GAGAATGCAGGGTGTCATGA+AGG | 0.574020 | 1.1:+80748735 | MS.gene93105:CDS |
ATAGGAAACATCCAGCAAGA+AGG | 0.574037 | 1.1:+80749482 | MS.gene93105:CDS |
AGCCCGTGGGTTATGAATCA+GGG | 0.574204 | 1.1:-80749066 | None:intergenic |
GTCGGGGCACTGAATCATCT+GGG | 0.576511 | 1.1:+80748994 | MS.gene93105:CDS |
TTAATTCCAGTGGATAGTGT+GGG | 0.577939 | 1.1:+80749413 | MS.gene93105:CDS |
AAAGTTCCCACACTATCCAC+TGG | 0.580370 | 1.1:-80749419 | None:intergenic |
ATTCTCCACACGGCTACATA+CGG | 0.584742 | 1.1:-80748718 | None:intergenic |
AATGCATTGTAAGCCGGCGT+AGG | 0.585492 | 1.1:-80749227 | None:intergenic |
AGAAGGGATTGAAATTTCAG+TGG | 0.588453 | 1.1:+80749499 | MS.gene93105:CDS |
TGATTTAAACGGGTTTGTGA+CGG | 0.594090 | 1.1:+80749322 | MS.gene93105:CDS |
TGGACGAGAATCGGTGCCTG+TGG | 0.598034 | 1.1:+80749028 | MS.gene93105:CDS |
AAAGGGTCACCGCCGTTGTG+CGG | 0.600828 | 1.1:+80748439 | MS.gene93105:CDS |
GGCGATTCGCCGCACAACGG+CGG | 0.601835 | 1.1:-80748448 | None:intergenic |
GAAACGTGGCTATCGGGTGT+GGG | 0.602041 | 1.1:+80748850 | MS.gene93105:CDS |
GTATGTTTGTTGGAGCAGCT+GGG | 0.602077 | 1.1:+80748886 | MS.gene93105:CDS |
TCCCAATGTAACAGTCTCAA+GGG | 0.603717 | 1.1:-80748814 | None:intergenic |
TGTTTCATACCCGACGCTAC+CGG | 0.608322 | 1.1:-80748469 | None:intergenic |
TAATTGGCCTACAAAAGACA+TGG | 0.608647 | 1.1:-80748931 | None:intergenic |
TAGGAACTTCTTAATTCCAG+TGG | 0.615344 | 1.1:+80749403 | MS.gene93105:CDS |
ATGTTATCACCAATCCGACC+CGG | 0.616285 | 1.1:+80748644 | MS.gene93105:CDS |
CCCCATAAGAAACCTCATAA+CGG | 0.617736 | 1.1:-80748764 | None:intergenic |
TGAAACAGAGGAGTTCGGGT+CGG | 0.622350 | 1.1:+80748485 | MS.gene93105:CDS |
TAAGAAGTTCCTAGCTGGAA+GGG | 0.625100 | 1.1:-80749393 | None:intergenic |
AGAATGCAGGGTGTCATGAA+GGG | 0.627661 | 1.1:+80748736 | MS.gene93105:CDS |
CTGCTCCAACAAACATACCC+TGG | 0.630612 | 1.1:-80748881 | None:intergenic |
AGTTATTGTTTAGTGAGTCG+GGG | 0.632837 | 1.1:+80748978 | MS.gene93105:CDS |
GACACCCTGCATTCTCCACA+CGG | 0.638693 | 1.1:-80748728 | None:intergenic |
ACACCGGCACTGCCGTGACG+AGG | 0.644153 | 1.1:+80749201 | MS.gene93105:CDS |
GGACGAGAATCGGTGCCTGT+GGG | 0.648473 | 1.1:+80749029 | MS.gene93105:CDS |
CGGCGTAGGTAACCTCGTCA+CGG | 0.668982 | 1.1:-80749213 | None:intergenic |
CAATTAGGTGGTCAGACTGG+CGG | 0.669034 | 1.1:+80748948 | MS.gene93105:CDS |
AGGAACTGTGATCCGAAACG+TGG | 0.669373 | 1.1:+80748836 | MS.gene93105:CDS |
GGGTGTGGGCATAGGAACCA+GGG | 0.673291 | 1.1:+80748864 | MS.gene93105:CDS |
CTCCACACGGCTACATACGG+TGG | 0.673617 | 1.1:-80748715 | None:intergenic |
TAGCGTCGGGTATGAAACAG+AGG | 0.673926 | 1.1:+80748473 | MS.gene93105:CDS |
ATGCAGGGTGTCATGAAGGG+AGG | 0.676996 | 1.1:+80748739 | MS.gene93105:CDS |
TTCCACCGTATGTAGCCGTG+TGG | 0.688346 | 1.1:+80748713 | MS.gene93105:CDS |
AATTGGCCTACAAAAGACAT+GGG | 0.692119 | 1.1:-80748930 | None:intergenic |
GTAGCCGTGTGGAGAATGCA+GGG | 0.695428 | 1.1:+80748724 | MS.gene93105:CDS |
CGTGACGAGGTTACCTACGC+CGG | 0.710425 | 1.1:+80749214 | MS.gene93105:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACATAATAATCGTACTATAT+AGG | + | chr1.1:80749693-80749712 | MS.gene93105:intron | 20.0% |
!!! | AACCATATCATTTTATTTCT+CGG | + | chr1.1:80749355-80749374 | MS.gene93105:CDS | 20.0% |
! | ACACATGTTATGATTTAAAC+GGG | + | chr1.1:80749312-80749331 | MS.gene93105:CDS | 25.0% |
! | ATCATAACATGTGTCAAAAA+TGG | - | chr1.1:80749306-80749325 | None:intergenic | 25.0% |
! | ATCGTACTATATAGGATAAA+TGG | + | chr1.1:80749701-80749720 | MS.gene93105:intron | 25.0% |
! | GACACATGTTATGATTTAAA+CGG | + | chr1.1:80749311-80749330 | MS.gene93105:CDS | 25.0% |
! | GAGAAATAAAATGATATGGT+TGG | - | chr1.1:80749356-80749375 | None:intergenic | 25.0% |
! | TTAGTTATTGTTTAGTGAGT+CGG | + | chr1.1:80748976-80748995 | MS.gene93105:CDS | 25.0% |
!! | TTTTTATTATATCGGGCTTT+CGG | + | chr1.1:80749094-80749113 | MS.gene93105:CDS | 25.0% |
!!! | ACCATATCATTTTATTTCTC+GGG | + | chr1.1:80749356-80749375 | MS.gene93105:CDS | 25.0% |
!!! | GTTTTTCGGTTAAATGAATT+GGG | + | chr1.1:80749158-80749177 | MS.gene93105:CDS | 25.0% |
!!! | TGTTTTTCGGTTAAATGAAT+TGG | + | chr1.1:80749157-80749176 | MS.gene93105:CDS | 25.0% |
ACCCGAGAAATAAAATGATA+TGG | - | chr1.1:80749360-80749379 | None:intergenic | 30.0% | |
AGCCCGATATAATAAAAACT+CGG | - | chr1.1:80749092-80749111 | None:intergenic | 30.0% | |
CACATGACTTAACATACATT+GGG | - | chr1.1:80749554-80749573 | None:intergenic | 30.0% | |
TAGTTATTGTTTAGTGAGTC+GGG | + | chr1.1:80748977-80748996 | MS.gene93105:CDS | 30.0% | |
TATTTCGTAAGAATAGGAGT+TGG | + | chr1.1:80748543-80748562 | MS.gene93105:CDS | 30.0% | |
TCACATGACTTAACATACAT+TGG | - | chr1.1:80749555-80749574 | None:intergenic | 30.0% | |
! | CTATATCGGAAGATGTTTTT+CGG | + | chr1.1:80749144-80749163 | MS.gene93105:CDS | 30.0% |
! | CTCCGAGTTTTTATTATATC+GGG | + | chr1.1:80749087-80749106 | MS.gene93105:CDS | 30.0% |
! | GCTCCGAGTTTTTATTATAT+CGG | + | chr1.1:80749086-80749105 | MS.gene93105:CDS | 30.0% |
! | TTTTATTATATCGGGCTTTC+GGG | + | chr1.1:80749095-80749114 | MS.gene93105:CDS | 30.0% |
!! | ATATCATTTTATTTCTCGGG+TGG | + | chr1.1:80749359-80749378 | MS.gene93105:CDS | 30.0% |
!! | CTTGACATATATTAGCTTTG+AGG | - | chr1.1:80749613-80749632 | None:intergenic | 30.0% |
!! | TATCATTTTATTTCTCGGGT+GGG | + | chr1.1:80749360-80749379 | MS.gene93105:CDS | 30.0% |
!!! | ATAACCACGTATTGGTTTTT+TGG | - | chr1.1:80748576-80748595 | None:intergenic | 30.0% |
AAATTTCAATCCCTTCTTGC+TGG | - | chr1.1:80749496-80749515 | None:intergenic | 35.0% | |
AGAAGGGATTGAAATTTCAG+TGG | + | chr1.1:80749499-80749518 | MS.gene93105:CDS | 35.0% | |
AGTTATTGTTTAGTGAGTCG+GGG | + | chr1.1:80748978-80748997 | MS.gene93105:CDS | 35.0% | |
CGAAAAACATCTTCCGATAT+AGG | - | chr1.1:80749146-80749165 | None:intergenic | 35.0% | |
GTATGTTAAGTCATGTGAGT+TGG | + | chr1.1:80749557-80749576 | MS.gene93105:intron | 35.0% | |
TAGGAACTTCTTAATTCCAG+TGG | + | chr1.1:80749403-80749422 | MS.gene93105:CDS | 35.0% | |
TTAATTCCAGTGGATAGTGT+GGG | + | chr1.1:80749413-80749432 | MS.gene93105:CDS | 35.0% | |
! | AATGGATACTCCTGATGTTT+TGG | - | chr1.1:80749288-80749307 | None:intergenic | 35.0% |
! | AATTGGCCTACAAAAGACAT+GGG | - | chr1.1:80748933-80748952 | None:intergenic | 35.0% |
! | ATGGATACTCCTGATGTTTT+GGG | - | chr1.1:80749287-80749306 | None:intergenic | 35.0% |
! | ATGTCTTTTGTAGGCCAATT+AGG | + | chr1.1:80748933-80748952 | MS.gene93105:CDS | 35.0% |
! | CCAATACGTGGTTATTGATT+CGG | + | chr1.1:80748581-80748600 | MS.gene93105:CDS | 35.0% |
! | TAATTGGCCTACAAAAGACA+TGG | - | chr1.1:80748934-80748953 | None:intergenic | 35.0% |
! | TGATTTAAACGGGTTTGTGA+CGG | + | chr1.1:80749322-80749341 | MS.gene93105:CDS | 35.0% |
!! | CAATACGTGGTTATTGATTC+GGG | + | chr1.1:80748582-80748601 | MS.gene93105:CDS | 35.0% |
!! | GGAGAGTATTTCGTAAGAAT+AGG | + | chr1.1:80748537-80748556 | MS.gene93105:CDS | 35.0% |
ACAAACCTACCCAAAACATC+AGG | + | chr1.1:80749275-80749294 | MS.gene93105:CDS | 40.0% | |
ATAGGAAACATCCAGCAAGA+AGG | + | chr1.1:80749482-80749501 | MS.gene93105:CDS | 40.0% | |
ATGAGGTTTCTTATGGGGAT+GGG | + | chr1.1:80748769-80748788 | MS.gene93105:CDS | 40.0% | |
ATGGAAAGTCCTGAAGAAGA+AGG | - | chr1.1:80749461-80749480 | None:intergenic | 40.0% | |
ATTCGGGCAGTGACATTATT+TGG | + | chr1.1:80748598-80748617 | MS.gene93105:CDS | 40.0% | |
ATTTCAGTGGATGGAGCTAA+TGG | + | chr1.1:80749512-80749531 | MS.gene93105:CDS | 40.0% | |
CCCCATAAGAAACCTCATAA+CGG | - | chr1.1:80748767-80748786 | None:intergenic | 40.0% | |
CCGAATCAATAACCACGTAT+TGG | - | chr1.1:80748584-80748603 | None:intergenic | 40.0% | |
CCGTTATGAGGTTTCTTATG+GGG | + | chr1.1:80748764-80748783 | MS.gene93105:CDS | 40.0% | |
CGGTTAAATGAATTGGGTGA+GGG | + | chr1.1:80749164-80749183 | MS.gene93105:CDS | 40.0% | |
CTTAATTCCAGTGGATAGTG+TGG | + | chr1.1:80749412-80749431 | MS.gene93105:CDS | 40.0% | |
GCCGTTATGAGGTTTCTTAT+GGG | + | chr1.1:80748763-80748782 | MS.gene93105:CDS | 40.0% | |
GCTAGAATTTGGACGAGAAT+CGG | + | chr1.1:80749019-80749038 | MS.gene93105:CDS | 40.0% | |
GGAATTAAGAAGTTCCTAGC+TGG | - | chr1.1:80749401-80749420 | None:intergenic | 40.0% | |
GGGATTGAAATTTCAGTGGA+TGG | + | chr1.1:80749503-80749522 | MS.gene93105:CDS | 40.0% | |
TAAATGAATTGGGTGAGGGA+GGG | + | chr1.1:80749168-80749187 | MS.gene93105:CDS | 40.0% | |
TAAGAAGTTCCTAGCTGGAA+GGG | - | chr1.1:80749396-80749415 | None:intergenic | 40.0% | |
TAGGAAACATCCAGCAAGAA+GGG | + | chr1.1:80749483-80749502 | MS.gene93105:CDS | 40.0% | |
TATGAGGTTTCTTATGGGGA+TGG | + | chr1.1:80748768-80748787 | MS.gene93105:CDS | 40.0% | |
TCCACCAAAAAACCAATACG+TGG | + | chr1.1:80748569-80748588 | MS.gene93105:CDS | 40.0% | |
TCCCAATGTAACAGTCTCAA+GGG | - | chr1.1:80748817-80748836 | None:intergenic | 40.0% | |
TCGGTTAAATGAATTGGGTG+AGG | + | chr1.1:80749163-80749182 | MS.gene93105:CDS | 40.0% | |
TCTTCAGGACTTTCCATCAT+AGG | + | chr1.1:80749464-80749483 | MS.gene93105:CDS | 40.0% | |
TGCCGTTATGAGGTTTCTTA+TGG | + | chr1.1:80748762-80748781 | MS.gene93105:CDS | 40.0% | |
TGGTGATAACATTGGGTACA+TGG | - | chr1.1:80748636-80748655 | None:intergenic | 40.0% | |
TTAAATGAATTGGGTGAGGG+AGG | + | chr1.1:80749167-80749186 | MS.gene93105:CDS | 40.0% | |
TTAAGAAGTTCCTAGCTGGA+AGG | - | chr1.1:80749397-80749416 | None:intergenic | 40.0% | |
TTCGGGCAGTGACATTATTT+GGG | + | chr1.1:80748599-80748618 | MS.gene93105:CDS | 40.0% | |
TTGCTGGATGTTTCCTATGA+TGG | - | chr1.1:80749480-80749499 | None:intergenic | 40.0% | |
TTTCAGTGGATGGAGCTAAT+GGG | + | chr1.1:80749513-80749532 | MS.gene93105:CDS | 40.0% | |
TTTCCCTGATTCATAACCCA+CGG | + | chr1.1:80749063-80749082 | MS.gene93105:CDS | 40.0% | |
! | GATGGAGCTAATGGGTATAT+GGG | + | chr1.1:80749521-80749540 | MS.gene93105:CDS | 40.0% |
! | GCTAATGGGTATATGGGATT+TGG | + | chr1.1:80749527-80749546 | MS.gene93105:CDS | 40.0% |
! | TCTTTTGTAGGCCAATTAGG+TGG | + | chr1.1:80748936-80748955 | MS.gene93105:CDS | 40.0% |
!! | ATACTCCTGATGTTTTGGGT+AGG | - | chr1.1:80749283-80749302 | None:intergenic | 40.0% |
!! | GTCGGATTGGTGATAACATT+GGG | - | chr1.1:80748643-80748662 | None:intergenic | 40.0% |
!! | GTTGGATTTTAGAAGCTCGT+CGG | + | chr1.1:80749575-80749594 | MS.gene93105:intron | 40.0% |
!! | TTGGATTTTAGAAGCTCGTC+GGG | + | chr1.1:80749576-80749595 | MS.gene93105:intron | 40.0% |
!!! | ACCACGTATTGGTTTTTTGG+TGG | - | chr1.1:80748573-80748592 | None:intergenic | 40.0% |
AAAGTTCCCACACTATCCAC+TGG | - | chr1.1:80749422-80749441 | None:intergenic | 45.0% | |
AAATGAATTGGGTGAGGGAG+GGG | + | chr1.1:80749169-80749188 | MS.gene93105:CDS | 45.0% | |
AATAAAAACTCGGAGCCCGT+GGG | - | chr1.1:80749082-80749101 | None:intergenic | 45.0% | |
AGGAACCAGGGTATGTTTGT+TGG | + | chr1.1:80748876-80748895 | MS.gene93105:CDS | 45.0% | |
ATGTTATCACCAATCCGACC+CGG | + | chr1.1:80748644-80748663 | MS.gene93105:CDS | 45.0% | |
ATTCTCCACACGGCTACATA+CGG | - | chr1.1:80748721-80748740 | None:intergenic | 45.0% | |
ATTGGGTACATGGTTGACAC+TGG | - | chr1.1:80748626-80748645 | None:intergenic | 45.0% | |
CATAAGATGAAGAATCCCCC+GGG | - | chr1.1:80748677-80748696 | None:intergenic | 45.0% | |
CTAGCTGGAAGGGTCAATAT+AGG | - | chr1.1:80749386-80749405 | None:intergenic | 45.0% | |
CTATATTGACCCTTCCAGCT+AGG | + | chr1.1:80749384-80749403 | MS.gene93105:CDS | 45.0% | |
CTCCCAATGTAACAGTCTCA+AGG | - | chr1.1:80748818-80748837 | None:intergenic | 45.0% | |
CTTGAGACTGTTACATTGGG+AGG | + | chr1.1:80748816-80748835 | MS.gene93105:CDS | 45.0% | |
GCATAAGATGAAGAATCCCC+CGG | - | chr1.1:80748678-80748697 | None:intergenic | 45.0% | |
GCATTTGCTCCTTCTTCTTC+AGG | + | chr1.1:80749449-80749468 | MS.gene93105:CDS | 45.0% | |
GCCCTTGAGACTGTTACATT+GGG | + | chr1.1:80748813-80748832 | MS.gene93105:CDS | 45.0% | |
GGCAAGTGTCCCTTTAGTAT+AGG | - | chr1.1:80748796-80748815 | None:intergenic | 45.0% | |
GGGATGGGTCCTATACTAAA+GGG | + | chr1.1:80748784-80748803 | MS.gene93105:CDS | 45.0% | |
GGGGATTCTTCATCTTATGC+TGG | + | chr1.1:80748678-80748697 | MS.gene93105:CDS | 45.0% | |
GGGTATGAAACAGAGGAGTT+CGG | + | chr1.1:80748480-80748499 | MS.gene93105:CDS | 45.0% | |
GGTATGAAACAGAGGAGTTC+GGG | + | chr1.1:80748481-80748500 | MS.gene93105:CDS | 45.0% | |
TAATAAAAACTCGGAGCCCG+TGG | - | chr1.1:80749083-80749102 | None:intergenic | 45.0% | |
TCATCTGGGTCGCTAGAATT+TGG | + | chr1.1:80749008-80749027 | MS.gene93105:CDS | 45.0% | |
TCCCGAAATGCATTGTAAGC+CGG | - | chr1.1:80749236-80749255 | None:intergenic | 45.0% | |
TCTTATGCTGGTGTGTCTTG+CGG | + | chr1.1:80748690-80748709 | MS.gene93105:CDS | 45.0% | |
TGCCCTTGAGACTGTTACAT+TGG | + | chr1.1:80748812-80748831 | MS.gene93105:CDS | 45.0% | |
TTCCCTGATTCATAACCCAC+GGG | + | chr1.1:80749064-80749083 | MS.gene93105:CDS | 45.0% | |
! | AGAATGCAGGGTGTCATGAA+GGG | + | chr1.1:80748736-80748755 | MS.gene93105:CDS | 45.0% |
! | GGATGGAGCTAATGGGTATA+TGG | + | chr1.1:80749520-80749539 | MS.gene93105:CDS | 45.0% |
! | GTATGTTTGTTGGAGCAGCT+GGG | + | chr1.1:80748886-80748905 | MS.gene93105:CDS | 45.0% |
! | TAAACGGGTTTGTGACGGTT+CGG | + | chr1.1:80749327-80749346 | MS.gene93105:CDS | 45.0% |
!! | GGTCGGATTGGTGATAACAT+TGG | - | chr1.1:80748644-80748663 | None:intergenic | 45.0% |
!! | TGGATTTTAGAAGCTCGTCG+GGG | + | chr1.1:80749577-80749596 | MS.gene93105:intron | 45.0% |
AATCCCCCGGGTTAAAAACC+GGG | - | chr1.1:80748665-80748684 | None:intergenic | 50.0% | |
AATGCATTGTAAGCCGGCGT+AGG | - | chr1.1:80749230-80749249 | None:intergenic | 50.0% | |
AGGAACTGTGATCCGAAACG+TGG | + | chr1.1:80748836-80748855 | MS.gene93105:CDS | 50.0% | |
CAATTAGGTGGTCAGACTGG+CGG | + | chr1.1:80748948-80748967 | MS.gene93105:CDS | 50.0% | |
CTGCTCCAACAAACATACCC+TGG | - | chr1.1:80748884-80748903 | None:intergenic | 50.0% | |
GAATCCCCCGGGTTAAAAAC+CGG | - | chr1.1:80748666-80748685 | None:intergenic | 50.0% | |
GGGGATGGGTCCTATACTAA+AGG | + | chr1.1:80748783-80748802 | MS.gene93105:CDS | 50.0% | |
GGGGTTGAGGGTTCCTATAT+CGG | + | chr1.1:80749130-80749149 | MS.gene93105:CDS | 50.0% | |
GGTTAAAAACCGGGTCGGAT+TGG | - | chr1.1:80748656-80748675 | None:intergenic | 50.0% | |
GGTTGTTGGGTCTTGGAAGT+GGG | + | chr1.1:80748907-80748926 | MS.gene93105:CDS | 50.0% | |
GTGATCCGAAACGTGGCTAT+CGG | + | chr1.1:80748843-80748862 | MS.gene93105:CDS | 50.0% | |
TGAAACAGAGGAGTTCGGGT+CGG | + | chr1.1:80748485-80748504 | MS.gene93105:CDS | 50.0% | |
TGATCCGAAACGTGGCTATC+GGG | + | chr1.1:80748844-80748863 | MS.gene93105:CDS | 50.0% | |
TGTTTCATACCCGACGCTAC+CGG | - | chr1.1:80748472-80748491 | None:intergenic | 50.0% | |
! | AAACGGGTTTGTGACGGTTC+GGG | + | chr1.1:80749328-80749347 | MS.gene93105:CDS | 50.0% |
! | AGCCCGTGGGTTATGAATCA+GGG | - | chr1.1:80749069-80749088 | None:intergenic | 50.0% |
! | AGTGGGCCCATGTCTTTTGT+AGG | + | chr1.1:80748924-80748943 | MS.gene93105:CDS | 50.0% |
! | ATCCGACCCGGTTTTTAACC+CGG | + | chr1.1:80748656-80748675 | MS.gene93105:CDS | 50.0% |
! | GAGAATGCAGGGTGTCATGA+AGG | + | chr1.1:80748735-80748754 | MS.gene93105:CDS | 50.0% |
! | GCCGGCTTACAATGCATTTC+GGG | + | chr1.1:80749232-80749251 | MS.gene93105:CDS | 50.0% |
! | GGTATGTTTGTTGGAGCAGC+TGG | + | chr1.1:80748885-80748904 | MS.gene93105:CDS | 50.0% |
! | TAGCGTCGGGTATGAAACAG+AGG | + | chr1.1:80748473-80748492 | MS.gene93105:CDS | 50.0% |
! | TATATCGGGCTTTCGGGTCT+TGG | + | chr1.1:80749101-80749120 | MS.gene93105:CDS | 50.0% |
!! | CGCCGGCTTACAATGCATTT+CGG | + | chr1.1:80749231-80749250 | MS.gene93105:CDS | 50.0% |
CACACCCGATAGCCACGTTT+CGG | - | chr1.1:80748851-80748870 | None:intergenic | 55.0% | |
CGCCAGTCTGACCACCTAAT+TGG | - | chr1.1:80748950-80748969 | None:intergenic | 55.0% | |
GAAACAGAGGAGTTCGGGTC+GGG | + | chr1.1:80748486-80748505 | MS.gene93105:CDS | 55.0% | |
GAAACGTGGCTATCGGGTGT+GGG | + | chr1.1:80748850-80748869 | MS.gene93105:CDS | 55.0% | |
GACACCCTGCATTCTCCACA+CGG | - | chr1.1:80748731-80748750 | None:intergenic | 55.0% | |
GGCCAATTAGGTGGTCAGAC+TGG | + | chr1.1:80748945-80748964 | MS.gene93105:CDS | 55.0% | |
GGGTTGTTGGGTCTTGGAAG+TGG | + | chr1.1:80748906-80748925 | MS.gene93105:CDS | 55.0% | |
GTAGCCGTGTGGAGAATGCA+GGG | + | chr1.1:80748724-80748743 | MS.gene93105:CDS | 55.0% | |
GTTGGAGCAGCTGGGTTGTT+GGG | + | chr1.1:80748894-80748913 | MS.gene93105:CDS | 55.0% | |
TCGGGTATGGAGCAAGGAAG+TGG | + | chr1.1:80748516-80748535 | MS.gene93105:CDS | 55.0% | |
TCTTGGAGTTGGGGGGTTGA+GGG | + | chr1.1:80749118-80749137 | MS.gene93105:CDS | 55.0% | |
TGTAGCCGTGTGGAGAATGC+AGG | + | chr1.1:80748723-80748742 | MS.gene93105:CDS | 55.0% | |
TGTTGGAGCAGCTGGGTTGT+TGG | + | chr1.1:80748893-80748912 | MS.gene93105:CDS | 55.0% | |
TTCCACCGTATGTAGCCGTG+TGG | + | chr1.1:80748713-80748732 | MS.gene93105:CDS | 55.0% | |
! | ATGCAGGGTGTCATGAAGGG+AGG | + | chr1.1:80748739-80748758 | MS.gene93105:CDS | 55.0% |
! | CTTTCGGGTCTTGGAGTTGG+GGG | + | chr1.1:80749110-80749129 | MS.gene93105:CDS | 55.0% |
! | GAGCCCGTGGGTTATGAATC+AGG | - | chr1.1:80749070-80749089 | None:intergenic | 55.0% |
! | GCTTTCGGGTCTTGGAGTTG+GGG | + | chr1.1:80749109-80749128 | MS.gene93105:CDS | 55.0% |
! | GGCTTTCGGGTCTTGGAGTT+GGG | + | chr1.1:80749108-80749127 | MS.gene93105:CDS | 55.0% |
! | GTGGTTTCGGGTATGGAGCA+AGG | + | chr1.1:80748510-80748529 | MS.gene93105:CDS | 55.0% |
! | TCCGACCCGGTTTTTAACCC+GGG | + | chr1.1:80748657-80748676 | MS.gene93105:CDS | 55.0% |
! | TTTCGGGTCTTGGAGTTGGG+GGG | + | chr1.1:80749111-80749130 | MS.gene93105:CDS | 55.0% |
!! | AGTCGGGGCACTGAATCATC+TGG | + | chr1.1:80748993-80749012 | MS.gene93105:CDS | 55.0% |
!! | GTCGGGGCACTGAATCATCT+GGG | + | chr1.1:80748994-80749013 | MS.gene93105:CDS | 55.0% |
!! | TGAAGGGAGGTGCCGTTATG+AGG | + | chr1.1:80748752-80748771 | MS.gene93105:CDS | 55.0% |
AAAGGGTCACCGCCGTTGTG+CGG | + | chr1.1:80748439-80748458 | MS.gene93105:CDS | 60.0% | |
CCCCGGGTTAAAAACCGGGT+CGG | - | chr1.1:80748661-80748680 | None:intergenic | 60.0% | |
CGAAACGTGGCTATCGGGTG+TGG | + | chr1.1:80748849-80748868 | MS.gene93105:CDS | 60.0% | |
CGGCGTAGGTAACCTCGTCA+CGG | - | chr1.1:80749216-80749235 | None:intergenic | 60.0% | |
CGTGACGAGGTTACCTACGC+CGG | + | chr1.1:80749214-80749233 | MS.gene93105:CDS | 60.0% | |
CTCCACACGGCTACATACGG+TGG | - | chr1.1:80748718-80748737 | None:intergenic | 60.0% | |
GCAGCTGGGTTGTTGGGTCT+TGG | + | chr1.1:80748900-80748919 | MS.gene93105:CDS | 60.0% | |
GGGTGTGGGCATAGGAACCA+GGG | + | chr1.1:80748864-80748883 | MS.gene93105:CDS | 60.0% | |
GTCTTGGAGTTGGGGGGTTG+AGG | + | chr1.1:80749117-80749136 | MS.gene93105:CDS | 60.0% | |
GTTCGGGTCGGGTGTGGTTT+CGG | + | chr1.1:80748497-80748516 | MS.gene93105:CDS | 60.0% | |
TAACCTCGTCACGGCAGTGC+CGG | - | chr1.1:80749207-80749226 | None:intergenic | 60.0% | |
TGAATTGGGTGAGGGAGGGG+TGG | + | chr1.1:80749172-80749191 | MS.gene93105:CDS | 60.0% | |
TGGCTATCGGGTGTGGGCAT+AGG | + | chr1.1:80748856-80748875 | MS.gene93105:CDS | 60.0% | |
TTCGGGTCGGGTGTGGTTTC+GGG | + | chr1.1:80748498-80748517 | MS.gene93105:CDS | 60.0% | |
! | CCGACCCGGTTTTTAACCCG+GGG | + | chr1.1:80748658-80748677 | MS.gene93105:CDS | 60.0% |
! | CGACCCGGTTTTTAACCCGG+GGG | + | chr1.1:80748659-80748678 | MS.gene93105:CDS | 60.0% |
! | GAAACCCACGAAGCACCCAC+AGG | - | chr1.1:80749047-80749066 | None:intergenic | 60.0% |
! | GGACGAGAATCGGTGCCTGT+GGG | + | chr1.1:80749029-80749048 | MS.gene93105:CDS | 60.0% |
! | GGGCTTTCGGGTCTTGGAGT+TGG | + | chr1.1:80749107-80749126 | MS.gene93105:CDS | 60.0% |
! | GTCGGGTGTGGTTTCGGGTA+TGG | + | chr1.1:80748503-80748522 | MS.gene93105:CDS | 60.0% |
! | TGGACGAGAATCGGTGCCTG+TGG | + | chr1.1:80749028-80749047 | MS.gene93105:CDS | 60.0% |
ACCGGCGATTCGCCGCACAA+CGG | - | chr1.1:80748454-80748473 | None:intergenic | 65.0% | |
AGAGGAGTTCGGGTCGGGTG+TGG | + | chr1.1:80748491-80748510 | MS.gene93105:CDS | 65.0% | |
CGGGTGTGGGCATAGGAACC+AGG | + | chr1.1:80748863-80748882 | MS.gene93105:CDS | 65.0% | |
GGAGGGGTGGTCATGGACAC+CGG | + | chr1.1:80749185-80749204 | MS.gene93105:CDS | 65.0% | |
GGTGCCTGTGGGTGCTTCGT+GGG | + | chr1.1:80749040-80749059 | MS.gene93105:CDS | 65.0% | |
ACACCGGCACTGCCGTGACG+AGG | + | chr1.1:80749201-80749220 | MS.gene93105:CDS | 70.0% | |
CGGCGAATCGCCGGTAGCGT+CGG | + | chr1.1:80748459-80748478 | MS.gene93105:CDS | 70.0% | |
CGGTGCCTGTGGGTGCTTCG+TGG | + | chr1.1:80749039-80749058 | MS.gene93105:CDS | 70.0% | |
GCCGTTGTGCGGCGAATCGC+CGG | + | chr1.1:80748450-80748469 | MS.gene93105:CDS | 70.0% | |
GGCGAATCGCCGGTAGCGTC+GGG | + | chr1.1:80748460-80748479 | MS.gene93105:CDS | 70.0% | |
GGCGATTCGCCGCACAACGG+CGG | - | chr1.1:80748451-80748470 | None:intergenic | 70.0% | |
GGGTGAGGGAGGGGTGGTCA+TGG | + | chr1.1:80749178-80749197 | MS.gene93105:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 80748423 | 80749735 | 80748423 | ID=MS.gene93105 |
chr1.1 | mRNA | 80748423 | 80749735 | 80748423 | ID=MS.gene93105.t1;Parent=MS.gene93105 |
chr1.1 | exon | 80748423 | 80749556 | 80748423 | ID=MS.gene93105.t1.exon1;Parent=MS.gene93105.t1 |
chr1.1 | CDS | 80748423 | 80749556 | 80748423 | ID=cds.MS.gene93105.t1;Parent=MS.gene93105.t1 |
chr1.1 | exon | 80749715 | 80749735 | 80749715 | ID=MS.gene93105.t1.exon2;Parent=MS.gene93105.t1 |
chr1.1 | CDS | 80749715 | 80749735 | 80749715 | ID=cds.MS.gene93105.t1;Parent=MS.gene93105.t1 |
Gene Sequence |
Protein sequence |