Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030130.t1 | XP_013458339.1 | 99.6 | 502 | 2 | 0 | 1 | 502 | 1 | 502 | 2.20E-278 | 967.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030130.t1 | P31023 | 96.4 | 502 | 17 | 1 | 1 | 502 | 1 | 501 | 4.1e-273 | 941.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030130.t1 | A0A072V2R0 | 99.6 | 502 | 2 | 0 | 1 | 502 | 1 | 502 | 1.6e-278 | 967.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030130 | MS.gene56014 | PPI |
| MS.gene030130 | MS.gene53350 | PPI |
| MS.gene030130 | MS.gene00186 | PPI |
| MS.gene74672 | MS.gene030130 | PPI |
| MS.gene011262 | MS.gene030130 | PPI |
| MS.gene030130 | MS.gene019928 | PPI |
| MS.gene030130 | MS.gene07846 | PPI |
| MS.gene030130 | MS.gene042299 | PPI |
| MS.gene042299 | MS.gene030130 | PPI |
| MS.gene052712 | MS.gene030130 | PPI |
| MS.gene030130 | MS.gene65292 | PPI |
| MS.gene68603 | MS.gene030130 | PPI |
| MS.gene030130 | MS.gene26810 | PPI |
| MS.gene030130 | MS.gene061224 | PPI |
| MS.gene030130 | MS.gene67036 | PPI |
| MS.gene058213 | MS.gene030130 | PPI |
| MS.gene030130 | MS.gene65554 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030130.t1 | MTR_4g123070 | 99.602 | 502 | 2 | 0 | 1 | 502 | 1 | 502 | 0.0 | 1015 |
| MS.gene030130.t1 | MTR_2g034580 | 35.892 | 482 | 286 | 11 | 26 | 490 | 72 | 547 | 7.23e-76 | 249 |
| MS.gene030130.t1 | MTR_4g121880 | 35.388 | 503 | 294 | 11 | 5 | 490 | 56 | 544 | 8.07e-76 | 249 |
| MS.gene030130.t1 | MTR_2g034580 | 35.892 | 482 | 286 | 11 | 26 | 490 | 72 | 547 | 1.76e-75 | 249 |
| MS.gene030130.t1 | MTR_6g033515 | 31.263 | 467 | 285 | 10 | 40 | 486 | 26 | 476 | 4.16e-61 | 208 |
| MS.gene030130.t1 | MTR_6g033515 | 30.417 | 480 | 284 | 12 | 40 | 486 | 26 | 488 | 1.61e-56 | 196 |
| MS.gene030130.t1 | MTR_1g070505 | 27.959 | 490 | 320 | 11 | 15 | 486 | 47 | 521 | 8.04e-49 | 176 |
| MS.gene030130.t1 | MTR_0644s0030 | 30.105 | 382 | 256 | 8 | 31 | 409 | 296 | 669 | 1.02e-36 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030130.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene030130.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene030130.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene030130.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene030130.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene030130.t1 | AT3G17240 | 85.630 | 508 | 66 | 3 | 1 | 502 | 1 | 507 | 0.0 | 872 |
| MS.gene030130.t1 | AT3G17240 | 85.630 | 508 | 66 | 3 | 1 | 502 | 1 | 507 | 0.0 | 872 |
| MS.gene030130.t1 | AT3G16950 | 34.989 | 463 | 257 | 11 | 55 | 490 | 103 | 548 | 6.73e-73 | 241 |
| MS.gene030130.t1 | AT4G16155 | 35.637 | 463 | 253 | 12 | 55 | 490 | 101 | 545 | 6.92e-73 | 241 |
| MS.gene030130.t1 | AT3G16950 | 34.989 | 463 | 257 | 11 | 55 | 490 | 103 | 548 | 2.05e-72 | 241 |
| MS.gene030130.t1 | AT3G24170 | 29.374 | 463 | 299 | 11 | 40 | 486 | 27 | 477 | 5.76e-53 | 187 |
| MS.gene030130.t1 | AT3G24170 | 29.374 | 463 | 299 | 11 | 40 | 486 | 27 | 477 | 5.76e-53 | 187 |
| MS.gene030130.t1 | AT3G24170 | 29.374 | 463 | 299 | 11 | 40 | 486 | 27 | 477 | 5.76e-53 | 187 |
| MS.gene030130.t1 | AT3G54660 | 27.400 | 500 | 323 | 11 | 9 | 486 | 53 | 534 | 4.14e-43 | 161 |
| MS.gene030130.t1 | AT3G17240 | 73.196 | 97 | 19 | 3 | 1 | 91 | 1 | 96 | 3.19e-32 | 120 |
Find 158 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCACTTCTGGACTTAATT+TGG | 0.142487 | 8.4:+11344022 | MS.gene030130:CDS |
| GTGGTTGGAGTTGATACTTC+TGG | 0.261463 | 8.4:+11343906 | MS.gene030130:CDS |
| CCCGATAACTACAAGCTTCT+TGG | 0.267642 | 8.4:-11343715 | None:intergenic |
| TGACAAGGTAGGACGCATTT+TGG | 0.289967 | 8.4:+11344064 | MS.gene030130:CDS |
| ACCAAGCTGAGCAGCTTTAA+TGG | 0.289980 | 8.4:-11342129 | None:intergenic |
| GGTAGGACTCCATTCACTTC+TGG | 0.310454 | 8.4:+11344011 | MS.gene030130:CDS |
| GACAACATCTGCTTCAATTA+TGG | 0.320224 | 8.4:-11343976 | None:intergenic |
| AAGAAAATTGTATCATCAAC+AGG | 0.323435 | 8.4:+11343669 | MS.gene030130:CDS |
| AGGTCAAGAGGTTTCGCTTC+CGG | 0.337458 | 8.4:+11342050 | MS.gene030130:CDS |
| TGTTGGGAAGTTCCCTTTCA+TGG | 0.353483 | 8.4:+11344322 | MS.gene030130:CDS |
| CCCAAGAAGCTTGTAGTTAT+CGG | 0.353692 | 8.4:+11343714 | MS.gene030130:CDS |
| AAAGGAGACGGACAAAATAT+TGG | 0.354741 | 8.4:+11344403 | MS.gene030130:CDS |
| GAGGAGCAGGTTAAGGAAAC+TGG | 0.355744 | 8.4:+11344287 | MS.gene030130:CDS |
| CAGGCTCTTCAAATGTGAAT+TGG | 0.356810 | 8.4:-11344584 | None:intergenic |
| AATTGCCTTCGCCCTGCTAT+TGG | 0.359778 | 8.4:-11344345 | None:intergenic |
| CCGATAACTACAAGCTTCTT+GGG | 0.373836 | 8.4:-11343714 | None:intergenic |
| TTAACAGCCTCACTCATTGT+TGG | 0.377486 | 8.4:-11344533 | None:intergenic |
| AAGGAGACGGACAAAATATT+GGG | 0.381037 | 8.4:+11344404 | MS.gene030130:CDS |
| GCAATTGGTGATGTAATTCC+CGG | 0.389033 | 8.4:+11344125 | MS.gene030130:CDS |
| ATGAATGAGTTCTCCTGCAT+TGG | 0.396625 | 8.4:-11344444 | None:intergenic |
| GGCTAGAGATGGGCTCTGTA+TGG | 0.404513 | 8.4:+11343751 | MS.gene030130:CDS |
| TCCCTTTCATGGCCAATAGC+AGG | 0.405072 | 8.4:+11344333 | MS.gene030130:CDS |
| TGTCAAGATAATTGCTGAAA+AGG | 0.408222 | 8.4:+11344385 | MS.gene030130:CDS |
| CCAAGAAGCTTGTAGTTATC+GGG | 0.414079 | 8.4:+11343715 | MS.gene030130:CDS |
| GGCTCTGTATGGGGACGAAT+TGG | 0.414655 | 8.4:+11343762 | MS.gene030130:CDS |
| TGGTTGGAGTTGATACTTCT+GGG | 0.417457 | 8.4:+11343907 | MS.gene030130:CDS |
| TCCGTTACACTTTCTCTCTA+AGG | 0.422319 | 8.4:+11342030 | MS.gene030130:CDS |
| GGACTTAATTTGGACAAGAT+AGG | 0.423938 | 8.4:+11344032 | MS.gene030130:CDS |
| GAAGACAGAGGAGCAGGTTA+AGG | 0.424716 | 8.4:+11344280 | MS.gene030130:CDS |
| GCTAGAGATGGGCTCTGTAT+GGG | 0.427257 | 8.4:+11343752 | MS.gene030130:CDS |
| GTCATCATCGGTGGTGGTCC+CGG | 0.435774 | 8.4:+11342092 | MS.gene030130:CDS |
| TGTTGAGTACTTAGCTGGTA+AGG | 0.436084 | 8.4:+11344190 | MS.gene030130:CDS |
| GCCATTAAAGCTGCTCAGCT+TGG | 0.436823 | 8.4:+11342128 | MS.gene030130:CDS |
| CTGGAGTTCAATACCGTGTT+GGG | 0.438229 | 8.4:+11344306 | MS.gene030130:CDS |
| AACGATGGCTATGGCGAACT+TGG | 0.445916 | 8.4:+11341965 | None:intergenic |
| GAGAACGCTGAAACTGCTTC+CGG | 0.449447 | 8.4:-11343845 | None:intergenic |
| AACATTCATTTGCCAACCAT+GGG | 0.450908 | 8.4:+11343385 | MS.gene030130:CDS |
| CTTCCGGATTTCTCCATCCA+TGG | 0.451603 | 8.4:-11343829 | None:intergenic |
| AATCGAAATGGAACCTTGGA+AGG | 0.456741 | 8.4:-11342218 | None:intergenic |
| GTCTGTTCACCACCAGCTGC+TGG | 0.459349 | 8.4:-11343954 | None:intergenic |
| AATCTGACCCGGGGTATTGA+AGG | 0.459866 | 8.4:+11343474 | MS.gene030130:CDS |
| TCTGCCTTGTGTGCCAACAT+TGG | 0.464020 | 8.4:-11344149 | None:intergenic |
| AGTACTTAGCTGGTAAGGTT+GGG | 0.465511 | 8.4:+11344195 | MS.gene030130:CDS |
| TTATCGGGGCAGGTTACATT+GGG | 0.466168 | 8.4:+11343730 | MS.gene030130:CDS |
| GCTTGTGTTGAGTACTTAGC+TGG | 0.469925 | 8.4:+11344185 | MS.gene030130:CDS |
| CGTTGGTTGCATCCCTTCCA+AGG | 0.471575 | 8.4:+11342205 | MS.gene030130:CDS |
| CATATTATGGCACCCAATGC+AGG | 0.471769 | 8.4:+11344431 | MS.gene030130:CDS |
| TTCCCTACAGAAGCAACCTC+GGG | 0.473270 | 8.4:-11344260 | None:intergenic |
| GGAGTTGATACTTCTGGGGA+TGG | 0.475245 | 8.4:+11343912 | MS.gene030130:CDS |
| CAAATGAATGTTTAGCCTCA+TGG | 0.478496 | 8.4:-11343374 | None:intergenic |
| TGAATGAGTTCTCCTGCATT+GGG | 0.481793 | 8.4:-11344443 | None:intergenic |
| GTTATCGGGGCAGGTTACAT+TGG | 0.485635 | 8.4:+11343729 | MS.gene030130:CDS |
| AGGTTACATTGGGCTAGAGA+TGG | 0.486720 | 8.4:+11343740 | MS.gene030130:CDS |
| GAGTACTTAGCTGGTAAGGT+TGG | 0.487434 | 8.4:+11344194 | MS.gene030130:CDS |
| CGGTCCAATGTTGGCACACA+AGG | 0.493606 | 8.4:+11344145 | MS.gene030130:CDS |
| GTCTCGGGTGTCTATGCAAT+TGG | 0.495457 | 8.4:+11344110 | MS.gene030130:CDS |
| GGCGAACTTGGCTCGTAGGA+AGG | 0.497240 | 8.4:+11341977 | MS.gene030130:CDS |
| CCCTGCTATTGGCCATGAAA+GGG | 0.502849 | 8.4:-11344334 | None:intergenic |
| ATCGAAAAGCGTGGTGCTCT+TGG | 0.503316 | 8.4:+11342167 | MS.gene030130:CDS |
| ATAGACACCCGAGACATTTG+TGG | 0.506046 | 8.4:-11344102 | None:intergenic |
| ACCCCGAGGTTGCTTCTGTA+GGG | 0.507942 | 8.4:+11344258 | MS.gene030130:CDS |
| TGTAGGGAAGACAGAGGAGC+AGG | 0.508653 | 8.4:+11344274 | MS.gene030130:CDS |
| GGGTTCCGCTCTTCTTTCAT+CGG | 0.511274 | 8.4:+11341998 | MS.gene030130:CDS |
| GATGTTGTCCTTGTATCTGC+TGG | 0.512028 | 8.4:+11343990 | MS.gene030130:CDS |
| GCCCTGCTATTGGCCATGAA+AGG | 0.515476 | 8.4:-11344335 | None:intergenic |
| CGGATTTCTCCATCCATGGA+TGG | 0.518110 | 8.4:-11343825 | None:intergenic |
| GAAAACGACGTCGTCATCAT+CGG | 0.520382 | 8.4:+11342080 | MS.gene030130:CDS |
| CTAGAGATGGGCTCTGTATG+GGG | 0.523383 | 8.4:+11343753 | MS.gene030130:CDS |
| CATCCATGGATGGAGAAATC+CGG | 0.523667 | 8.4:+11343826 | MS.gene030130:CDS |
| GTAACATATGTCAAAGGATA+CGG | 0.525267 | 8.4:+11343516 | MS.gene030130:CDS |
| CAGCGTTCTCTTGAAAAGCA+AGG | 0.526866 | 8.4:+11343858 | MS.gene030130:CDS |
| GCACACAAGGCAGAAGAAGA+TGG | 0.528923 | 8.4:+11344158 | MS.gene030130:CDS |
| CCCTTTCATGGCCAATAGCA+GGG | 0.531192 | 8.4:+11344334 | MS.gene030130:CDS |
| CATTTGAAACTTTGACCCCA+TGG | 0.533125 | 8.4:-11343401 | None:intergenic |
| GAAAAGCGTGGTGCTCTTGG+TGG | 0.534842 | 8.4:+11342170 | MS.gene030130:CDS |
| TGAAACTTTGACCCCATGGT+TGG | 0.535838 | 8.4:-11343397 | None:intergenic |
| AAGCTTGTAGTTATCGGGGC+AGG | 0.538965 | 8.4:+11343720 | MS.gene030130:CDS |
| ATCGCAGATTGTTCCATCCA+TGG | 0.542630 | 8.4:+11343812 | MS.gene030130:CDS |
| AGCTGGTAAGGTTGGGCATG+TGG | 0.543166 | 8.4:+11344202 | MS.gene030130:CDS |
| CTTCCCTACAGAAGCAACCT+CGG | 0.546875 | 8.4:-11344261 | None:intergenic |
| GGTTACATTGGGCTAGAGAT+GGG | 0.547643 | 8.4:+11343741 | MS.gene030130:CDS |
| AAAATTCCTTTCACCATCTG+AGG | 0.547911 | 8.4:+11343539 | MS.gene030130:CDS |
| AAACATTCATTTGCCAACCA+TGG | 0.549901 | 8.4:+11343384 | MS.gene030130:CDS |
| CTAACTGTTGAACCAGCAGC+TGG | 0.550199 | 8.4:+11343942 | MS.gene030130:CDS |
| AATGGCGGCGACGTAACCGC+CGG | 0.551240 | 8.4:-11342111 | None:intergenic |
| GATGCAACCAACGTTGAGAC+AGG | 0.551664 | 8.4:-11342195 | None:intergenic |
| AAGCTGTTTCTAATCTGACC+CGG | 0.552292 | 8.4:+11343463 | MS.gene030130:CDS |
| CTATGGCGAACTTGGCTCGT+AGG | 0.555334 | 8.4:+11341973 | MS.gene030130:CDS |
| GAGTCCTACCAGCAGATACA+AGG | 0.558562 | 8.4:-11343998 | None:intergenic |
| GTCTCTGTAGACACCGTTGA+AGG | 0.558670 | 8.4:+11343561 | MS.gene030130:CDS |
| AAGCTGAATACCAAGGTGGT+TGG | 0.558857 | 8.4:+11343891 | MS.gene030130:CDS |
| GCGAACTTGGCTCGTAGGAA+GGG | 0.560636 | 8.4:+11341978 | MS.gene030130:CDS |
| TTGTCCTTGTATCTGCTGGT+AGG | 0.563808 | 8.4:+11343994 | MS.gene030130:CDS |
| GATTGACTTAGCTGCCATGA+TGG | 0.564118 | 8.4:+11343428 | MS.gene030130:CDS |
| ATGGCGGCGACGTAACCGCC+GGG | 0.564412 | 8.4:-11342110 | None:intergenic |
| AACCCCGAGGTTGCTTCTGT+AGG | 0.567406 | 8.4:+11344257 | MS.gene030130:CDS |
| AAGAATCTTAACGATGGCTA+TGG | 0.567804 | 8.4:+11341956 | None:intergenic |
| AAATTAAGTCCAGAAGTGAA+TGG | 0.568714 | 8.4:-11344020 | None:intergenic |
| AAATAGGCCTTCAATACCCC+GGG | 0.569237 | 8.4:-11343481 | None:intergenic |
| TGTAATTCCCGGTCCAATGT+TGG | 0.569254 | 8.4:+11344136 | MS.gene030130:CDS |
| ACTTTCTCTCTAAGGTCAAG+AGG | 0.569811 | 8.4:+11342038 | MS.gene030130:CDS |
| GTTTAGCCTCATGGTACATG+TGG | 0.570391 | 8.4:-11343365 | None:intergenic |
| AGCTGTTTCTAATCTGACCC+GGG | 0.571089 | 8.4:+11343464 | MS.gene030130:CDS |
| TAAATAGGCCTTCAATACCC+CGG | 0.573925 | 8.4:-11343482 | None:intergenic |
| CAGATTGTTCCATCCATGGA+TGG | 0.574676 | 8.4:+11343816 | MS.gene030130:CDS |
| GGCTGTTAAAGAAGCCGCAA+TGG | 0.578312 | 8.4:+11344547 | MS.gene030130:CDS |
| GACGTCGTCATCATCGGTGG+TGG | 0.579886 | 8.4:+11342086 | MS.gene030130:CDS |
| CAGAGACCTCAGATGGTGAA+AGG | 0.580741 | 8.4:-11343545 | None:intergenic |
| CTTGTGTGCCAACATTGGAC+CGG | 0.581579 | 8.4:-11344144 | None:intergenic |
| ACTGGAGTTCAATACCGTGT+TGG | 0.590339 | 8.4:+11344305 | MS.gene030130:CDS |
| AACAAGGTAACATATGTCAA+AGG | 0.591345 | 8.4:+11343510 | MS.gene030130:CDS |
| AAGCATATCATTATAGCCAC+CGG | 0.595212 | 8.4:+11343606 | MS.gene030130:CDS |
| TTCCGCTCTTCTTTCATCGG+CGG | 0.602872 | 8.4:+11342001 | MS.gene030130:CDS |
| GTGAATTGGCTTGTCATAAG+TGG | 0.602908 | 8.4:-11344570 | None:intergenic |
| GTGGACTATGACAAAGTACC+AGG | 0.603832 | 8.4:+11344221 | MS.gene030130:CDS |
| GGTGAAAATACTGTTGTGAA+AGG | 0.605474 | 8.4:+11343582 | MS.gene030130:CDS |
| CATGGCCAATAGCAGGGCGA+AGG | 0.605899 | 8.4:+11344340 | MS.gene030130:CDS |
| CGATAACTACAAGCTTCTTG+GGG | 0.608524 | 8.4:-11343713 | None:intergenic |
| GGTTGGAGTTGATACTTCTG+GGG | 0.615833 | 8.4:+11343908 | MS.gene030130:CDS |
| GATAATTGCTGAAAAGGAGA+CGG | 0.617580 | 8.4:+11344391 | MS.gene030130:CDS |
| GGTGGTACCTGTCTCAACGT+TGG | 0.621896 | 8.4:+11342188 | MS.gene030130:CDS |
| AGTATCAACTCCAACCACCT+TGG | 0.623456 | 8.4:-11343901 | None:intergenic |
| ATGGGGACGAATTGGCTCTG+AGG | 0.627284 | 8.4:+11343770 | MS.gene030130:CDS |
| ACCTTAGAGAGAAAGTGTAA+CGG | 0.630266 | 8.4:-11342031 | None:intergenic |
| AAGGCAATTGATAACGCTGA+AGG | 0.632613 | 8.4:+11344359 | MS.gene030130:CDS |
| TTGTGTGCCAACATTGGACC+GGG | 0.636415 | 8.4:-11344143 | None:intergenic |
| GGAGTTGAAACTGACAAGGT+AGG | 0.637183 | 8.4:+11344053 | MS.gene030130:CDS |
| TGGGGTCAAAGTTTCAAATG+TGG | 0.638191 | 8.4:+11343404 | MS.gene030130:CDS |
| TCAGATGTAAAATCTCTACC+TGG | 0.641837 | 8.4:+11343630 | MS.gene030130:CDS |
| GGGTTTGTATAGACAACACC+TGG | 0.647094 | 8.4:-11344239 | None:intergenic |
| AGAAAATTGTATCATCAACA+GGG | 0.647191 | 8.4:+11343670 | MS.gene030130:CDS |
| GTGTCTACAGAGACCTCAGA+TGG | 0.651528 | 8.4:-11343552 | None:intergenic |
| CAAGAAGCTTGTAGTTATCG+GGG | 0.654159 | 8.4:+11343716 | MS.gene030130:CDS |
| AACGACGTCGTCATCATCGG+TGG | 0.658246 | 8.4:+11342083 | MS.gene030130:CDS |
| TGCACATCCAACAATGAGTG+AGG | 0.658611 | 8.4:+11344526 | MS.gene030130:CDS |
| TTTAGCCTCATGGTACATGT+GGG | 0.660235 | 8.4:-11343364 | None:intergenic |
| AGGAGACGGACAAAATATTG+GGG | 0.662760 | 8.4:+11344405 | MS.gene030130:CDS |
| GCAGTATGATGCATCAAGTG+AGG | 0.668547 | 8.4:+11344484 | MS.gene030130:CDS |
| GCTGTTTCTAATCTGACCCG+GGG | 0.668806 | 8.4:+11343465 | MS.gene030130:CDS |
| TGAAAGGGAACTTCCCAACA+CGG | 0.669482 | 8.4:-11344319 | None:intergenic |
| ATCGAAATGGAACCTTGGAA+GGG | 0.671194 | 8.4:-11342217 | None:intergenic |
| ACCACTTGCATCGAAAAGCG+TGG | 0.672031 | 8.4:+11342158 | MS.gene030130:CDS |
| CTCCGCCGATGAAAGAAGAG+CGG | 0.675152 | 8.4:-11342003 | None:intergenic |
| GAAATTCAAGCTGAATACCA+AGG | 0.679504 | 8.4:+11343884 | MS.gene030130:CDS |
| GAAAATTGTATCATCAACAG+GGG | 0.680955 | 8.4:+11343671 | MS.gene030130:CDS |
| GGAGACGGACAAAATATTGG+GGG | 0.685454 | 8.4:+11344406 | MS.gene030130:CDS |
| CTTGTCATAAGTGGCCATTG+CGG | 0.687064 | 8.4:-11344561 | None:intergenic |
| TGCATCATACTGCAATGCAA+TGG | 0.690908 | 8.4:-11344474 | None:intergenic |
| TCCCTACAGAAGCAACCTCG+GGG | 0.694823 | 8.4:-11344259 | None:intergenic |
| AAGCTGAGCAGCTTTAATGG+CGG | 0.697561 | 8.4:-11342126 | None:intergenic |
| ACTGTTGAACCAGCAGCTGG+TGG | 0.697745 | 8.4:+11343945 | MS.gene030130:CDS |
| ACATTCATTTGCCAACCATG+GGG | 0.697828 | 8.4:+11343386 | MS.gene030130:CDS |
| GATAGGAGTTGAAACTGACA+AGG | 0.698372 | 8.4:+11344049 | MS.gene030130:CDS |
| ATCATCGGTGGTGGTCCCGG+CGG | 0.698397 | 8.4:+11342095 | MS.gene030130:CDS |
| TGCTTCTGTAGGGAAGACAG+AGG | 0.698830 | 8.4:+11344268 | MS.gene030130:CDS |
| TTCTTCCCACATGTACCATG+AGG | 0.705759 | 8.4:+11343359 | MS.gene030130:CDS |
| ATTCAAGCTGAATACCAAGG+TGG | 0.721568 | 8.4:+11343887 | MS.gene030130:CDS |
| TGTTGTCTATACAAACCCCG+AGG | 0.780319 | 8.4:+11344244 | MS.gene030130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACTATTAAAATAATACA+TGG | - | chr8.4:11343300-11343319 | None:intergenic | 10.0% |
| !! | TTACTATTAAAATAATACAT+GGG | - | chr8.4:11343299-11343318 | None:intergenic | 10.0% |
| !! | AAATTGTATGTTAAATGATA+TGG | + | chr8.4:11343176-11343195 | MS.gene030130:intron | 15.0% |
| !! | AGCATATTATATTAAATCAT+TGG | + | chr8.4:11343109-11343128 | MS.gene030130:intron | 15.0% |
| !! | ATATCATTTAACATACAATT+TGG | - | chr8.4:11343177-11343196 | None:intergenic | 15.0% |
| !! | CTAAAACAAAAGATAAAATA+AGG | + | chr8.4:11342604-11342623 | MS.gene030130:intron | 15.0% |
| !! | TACTATTAAAATAATACATG+GGG | - | chr8.4:11343298-11343317 | None:intergenic | 15.0% |
| !!! | TTTTTAATTGATTAAGTTGA+AGG | + | chr8.4:11342328-11342347 | MS.gene030130:intron | 15.0% |
| !!! | TTTTTGTTATTTTCGATTTT+TGG | + | chr8.4:11342359-11342378 | MS.gene030130:intron | 15.0% |
| !! | AATTAAAAAATACTTGACAC+AGG | - | chr8.4:11343006-11343025 | None:intergenic | 20.0% |
| !! | CTATATGAGAAAAAATGAAT+AGG | - | chr8.4:11342260-11342279 | None:intergenic | 20.0% |
| !!! | TTACCTTGTTTTTCTTAAAT+AGG | - | chr8.4:11343500-11343519 | None:intergenic | 20.0% |
| ! | AAGAAAATTGTATCATCAAC+AGG | + | chr8.4:11343669-11343688 | MS.gene030130:CDS | 25.0% |
| ! | ACATTCAATTCGTTAATCAA+CGG | - | chr8.4:11343079-11343098 | None:intergenic | 25.0% |
| ! | AGAAAATTGTATCATCAACA+GGG | + | chr8.4:11343670-11343689 | MS.gene030130:CDS | 25.0% |
| ! | AGAGAGTAAACATATTGTTA+TGG | + | chr8.4:11343052-11343071 | MS.gene030130:intron | 25.0% |
| ! | ATTATTAGATTTAGCTGGAT+GGG | + | chr8.4:11342834-11342853 | MS.gene030130:intron | 25.0% |
| ! | TTCTCATATAGATATAGATG+TGG | + | chr8.4:11342269-11342288 | MS.gene030130:intron | 25.0% |
| !! | TGTTTATATTTCTGTGTCTT+TGG | + | chr8.4:11342443-11342462 | MS.gene030130:intron | 25.0% |
| AAATTAAGTCCAGAAGTGAA+TGG | - | chr8.4:11344023-11344042 | None:intergenic | 30.0% | |
| AACAAGGTAACATATGTCAA+AGG | + | chr8.4:11343510-11343529 | MS.gene030130:CDS | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | + | chr8.4:11342689-11342708 | MS.gene030130:intron | 30.0% | |
| AGGCCTATTTAAGAAAAACA+AGG | + | chr8.4:11343494-11343513 | MS.gene030130:CDS | 30.0% | |
| AGTAGAAAAGTGAATCGAAA+TGG | - | chr8.4:11342233-11342252 | None:intergenic | 30.0% | |
| ATGAATAGCGCTTATGTATA+AGG | + | chr8.4:11342576-11342595 | MS.gene030130:intron | 30.0% | |
| ATGTTTACTCTCTAACATCT+GGG | - | chr8.4:11343045-11343064 | None:intergenic | 30.0% | |
| ATTAAGCTGTTTATCCAAAC+AGG | - | chr8.4:11342539-11342558 | None:intergenic | 30.0% | |
| ATTCACTTCTGGACTTAATT+TGG | + | chr8.4:11344022-11344041 | MS.gene030130:CDS | 30.0% | |
| CTAAACTTGTATTAACCTCT+TGG | + | chr8.4:11342977-11342996 | MS.gene030130:intron | 30.0% | |
| GAAAATTGTATCATCAACAG+GGG | + | chr8.4:11343671-11343690 | MS.gene030130:CDS | 30.0% | |
| GATTATTAGATTTAGCTGGA+TGG | + | chr8.4:11342833-11342852 | MS.gene030130:intron | 30.0% | |
| GTAACATATGTCAAAGGATA+CGG | + | chr8.4:11343516-11343535 | MS.gene030130:CDS | 30.0% | |
| GTATGTTAAATGATATGGTC+TGG | + | chr8.4:11343181-11343200 | MS.gene030130:intron | 30.0% | |
| TATGTTTACTCTCTAACATC+TGG | - | chr8.4:11343046-11343065 | None:intergenic | 30.0% | |
| TCCAGCTAAATCTAATAATC+CGG | - | chr8.4:11342833-11342852 | None:intergenic | 30.0% | |
| TGTCAAGATAATTGCTGAAA+AGG | + | chr8.4:11344385-11344404 | MS.gene030130:CDS | 30.0% | |
| TTAAGCTGTTTATCCAAACA+GGG | - | chr8.4:11342538-11342557 | None:intergenic | 30.0% | |
| ! | AACAGTATTTTCACCTTCAA+CGG | - | chr8.4:11343577-11343596 | None:intergenic | 30.0% |
| ! | ACTCTTGATTTTCTCACTTT+AGG | + | chr8.4:11343147-11343166 | MS.gene030130:intron | 30.0% |
| ! | CTCTTGATTTTCTCACTTTA+GGG | + | chr8.4:11343148-11343167 | MS.gene030130:intron | 30.0% |
| ! | TAAATGATATGGTCTGGAAT+TGG | + | chr8.4:11343187-11343206 | MS.gene030130:intron | 30.0% |
| ! | TAACTTTTCGTAGAGTCATT+TGG | + | chr8.4:11342913-11342932 | MS.gene030130:intron | 30.0% |
| ! | TAGAGATTTTACATCTGAAC+CGG | - | chr8.4:11343628-11343647 | None:intergenic | 30.0% |
| ! | TCTTGATTTTCTCACTTTAG+GGG | + | chr8.4:11343149-11343168 | MS.gene030130:intron | 30.0% |
| !! | CTTTGATTTTGGATGAACAT+CGG | + | chr8.4:11342419-11342438 | MS.gene030130:intron | 30.0% |
| !!! | CTCTTTTTTAAAGTCTACTC+TGG | + | chr8.4:11342947-11342966 | MS.gene030130:intron | 30.0% |
| AAAACATTTGCGAGACTGTT+TGG | - | chr8.4:11342745-11342764 | None:intergenic | 35.0% | |
| AAAACCATATTCCACTAGGT+GGG | - | chr8.4:11343255-11343274 | None:intergenic | 35.0% | |
| AAAATTCCTTTCACCATCTG+AGG | + | chr8.4:11343539-11343558 | MS.gene030130:CDS | 35.0% | |
| AAACATTCATTTGCCAACCA+TGG | + | chr8.4:11343384-11343403 | MS.gene030130:CDS | 35.0% | |
| AAACATTTGCGAGACTGTTT+GGG | - | chr8.4:11342744-11342763 | None:intergenic | 35.0% | |
| AAAGGAGACGGACAAAATAT+TGG | + | chr8.4:11344403-11344422 | MS.gene030130:CDS | 35.0% | |
| AACATTCATTTGCCAACCAT+GGG | + | chr8.4:11343385-11343404 | MS.gene030130:CDS | 35.0% | |
| AACCAAAACCATATTCCACT+AGG | - | chr8.4:11343259-11343278 | None:intergenic | 35.0% | |
| AAGCATATCATTATAGCCAC+CGG | + | chr8.4:11343606-11343625 | MS.gene030130:CDS | 35.0% | |
| AAGGAGACGGACAAAATATT+GGG | + | chr8.4:11344404-11344423 | MS.gene030130:CDS | 35.0% | |
| ACCGGATTATTAGATTTAGC+TGG | + | chr8.4:11342829-11342848 | MS.gene030130:intron | 35.0% | |
| CAAATGAATGTTTAGCCTCA+TGG | - | chr8.4:11343377-11343396 | None:intergenic | 35.0% | |
| GAAATTCAAGCTGAATACCA+AGG | + | chr8.4:11343884-11343903 | MS.gene030130:CDS | 35.0% | |
| GACAACATCTGCTTCAATTA+TGG | - | chr8.4:11343979-11343998 | None:intergenic | 35.0% | |
| GATAATTGCTGAAAAGGAGA+CGG | + | chr8.4:11344391-11344410 | MS.gene030130:CDS | 35.0% | |
| GGTGAAAATACTGTTGTGAA+AGG | + | chr8.4:11343582-11343601 | MS.gene030130:CDS | 35.0% | |
| TCAGATGTAAAATCTCTACC+TGG | + | chr8.4:11343630-11343649 | MS.gene030130:CDS | 35.0% | |
| TCTTGATTTAATGCCCTGTT+TGG | + | chr8.4:11342522-11342541 | MS.gene030130:intron | 35.0% | |
| TTGTGTTGCCTTCATATTTC+AGG | + | chr8.4:11343326-11343345 | MS.gene030130:intron | 35.0% | |
| ! | AAGGTTTTCCACAAATGTCT+CGG | + | chr8.4:11344094-11344113 | MS.gene030130:CDS | 35.0% |
| ! | AATATTGGGGGTGCATATTA+TGG | + | chr8.4:11344418-11344437 | MS.gene030130:CDS | 35.0% |
| ! | ACCTTAGAGAGAAAGTGTAA+CGG | - | chr8.4:11342034-11342053 | None:intergenic | 35.0% |
| ! | GGACTTAATTTGGACAAGAT+AGG | + | chr8.4:11344032-11344051 | MS.gene030130:CDS | 35.0% |
| !! | GACGCATTTTGGTAAATGAA+AGG | + | chr8.4:11344075-11344094 | MS.gene030130:CDS | 35.0% |
| !!! | CAAGTTAGTTTTTTCTGCTG+AGG | + | chr8.4:11342387-11342406 | MS.gene030130:intron | 35.0% |
| AAACCATATTCCACTAGGTG+GGG | - | chr8.4:11343254-11343273 | None:intergenic | 40.0% | |
| AATCGAAATGGAACCTTGGA+AGG | - | chr8.4:11342221-11342240 | None:intergenic | 40.0% | |
| ACATTCATTTGCCAACCATG+GGG | + | chr8.4:11343386-11343405 | MS.gene030130:CDS | 40.0% | |
| AGGAGACGGACAAAATATTG+GGG | + | chr8.4:11344405-11344424 | MS.gene030130:CDS | 40.0% | |
| AGTACTTAGCTGGTAAGGTT+GGG | + | chr8.4:11344195-11344214 | MS.gene030130:CDS | 40.0% | |
| AGTGAATCGAAATGGAACCT+TGG | - | chr8.4:11342225-11342244 | None:intergenic | 40.0% | |
| ATCGAAATGGAACCTTGGAA+GGG | - | chr8.4:11342220-11342239 | None:intergenic | 40.0% | |
| ATGAATGAGTTCTCCTGCAT+TGG | - | chr8.4:11344447-11344466 | None:intergenic | 40.0% | |
| ATTCAAGCTGAATACCAAGG+TGG | + | chr8.4:11343887-11343906 | MS.gene030130:CDS | 40.0% | |
| CAAAACCATATTCCACTAGG+TGG | - | chr8.4:11343256-11343275 | None:intergenic | 40.0% | |
| CAAGAAGCTTGTAGTTATCG+GGG | + | chr8.4:11343716-11343735 | MS.gene030130:CDS | 40.0% | |
| CCAAGAAGCTTGTAGTTATC+GGG | + | chr8.4:11343715-11343734 | MS.gene030130:CDS | 40.0% | |
| CCCAAGAAGCTTGTAGTTAT+CGG | + | chr8.4:11343714-11343733 | MS.gene030130:CDS | 40.0% | |
| CCGATAACTACAAGCTTCTT+GGG | - | chr8.4:11343717-11343736 | None:intergenic | 40.0% | |
| CGATAACTACAAGCTTCTTG+GGG | - | chr8.4:11343716-11343735 | None:intergenic | 40.0% | |
| GATAGGAGTTGAAACTGACA+AGG | + | chr8.4:11344049-11344068 | MS.gene030130:CDS | 40.0% | |
| TAAATAGGCCTTCAATACCC+CGG | - | chr8.4:11343485-11343504 | None:intergenic | 40.0% | |
| TCCGTTACACTTTCTCTCTA+AGG | + | chr8.4:11342030-11342049 | MS.gene030130:CDS | 40.0% | |
| TGAATGAGTTCTCCTGCATT+GGG | - | chr8.4:11344446-11344465 | None:intergenic | 40.0% | |
| TGCATCATACTGCAATGCAA+TGG | - | chr8.4:11344477-11344496 | None:intergenic | 40.0% | |
| TGGGGTCAAAGTTTCAAATG+TGG | + | chr8.4:11343404-11343423 | MS.gene030130:CDS | 40.0% | |
| TGTTGAGTACTTAGCTGGTA+AGG | + | chr8.4:11344190-11344209 | MS.gene030130:CDS | 40.0% | |
| TTAACAGCCTCACTCATTGT+TGG | - | chr8.4:11344536-11344555 | None:intergenic | 40.0% | |
| TTTAGCCTCATGGTACATGT+GGG | - | chr8.4:11343367-11343386 | None:intergenic | 40.0% | |
| ! | AGATTTTACATCTGAACCGG+TGG | - | chr8.4:11343625-11343644 | None:intergenic | 40.0% |
| ! | AGGTTTTCCACAAATGTCTC+GGG | + | chr8.4:11344095-11344114 | MS.gene030130:CDS | 40.0% |
| ! | CACCTAGTGGAATATGGTTT+TGG | + | chr8.4:11343254-11343273 | MS.gene030130:intron | 40.0% |
| ! | CATTTGAAACTTTGACCCCA+TGG | - | chr8.4:11343404-11343423 | None:intergenic | 40.0% |
| ! | TTTGTCTTTTTGCGCCATCA+TGG | - | chr8.4:11343445-11343464 | None:intergenic | 40.0% |
| ! | TTTTCATCAATAGTGACGCC+AGG | - | chr8.4:11343651-11343670 | None:intergenic | 40.0% |
| !! | AAGCTGTTTCTAATCTGACC+CGG | + | chr8.4:11343463-11343482 | MS.gene030130:CDS | 40.0% |
| !! | AAGGCAATTGATAACGCTGA+AGG | + | chr8.4:11344359-11344378 | MS.gene030130:CDS | 40.0% |
| !! | ACTTTCTCTCTAAGGTCAAG+AGG | + | chr8.4:11342038-11342057 | MS.gene030130:CDS | 40.0% |
| !! | CAAAAGCGCCTGAAATATGA+AGG | - | chr8.4:11343337-11343356 | None:intergenic | 40.0% |
| !! | GCAATTGGTGATGTAATTCC+CGG | + | chr8.4:11344125-11344144 | MS.gene030130:CDS | 40.0% |
| !! | GTGAATTGGCTTGTCATAAG+TGG | - | chr8.4:11344573-11344592 | None:intergenic | 40.0% |
| !! | TGGTTGGAGTTGATACTTCT+GGG | + | chr8.4:11343907-11343926 | MS.gene030130:CDS | 40.0% |
| !!! | GGTGGAGAGTACTTTGATTT+TGG | + | chr8.4:11342408-11342427 | MS.gene030130:intron | 40.0% |
| !!! | GTTAGTTTTTTCTGCTGAGG+TGG | + | chr8.4:11342390-11342409 | MS.gene030130:intron | 40.0% |
| AAATAGGCCTTCAATACCCC+GGG | - | chr8.4:11343484-11343503 | None:intergenic | 45.0% | |
| AAGCTGAATACCAAGGTGGT+TGG | + | chr8.4:11343891-11343910 | MS.gene030130:CDS | 45.0% | |
| AAGCTGTCGTGGAGAACTTA+TGG | + | chr8.4:11342665-11342684 | MS.gene030130:intron | 45.0% | |
| ACTGGAGTTCAATACCGTGT+TGG | + | chr8.4:11344305-11344324 | MS.gene030130:CDS | 45.0% | |
| ACTTGACACAGGAAACCAAG+AGG | - | chr8.4:11342995-11343014 | None:intergenic | 45.0% | |
| AGACAAGCGCTTAGACATGA+AGG | - | chr8.4:11342807-11342826 | None:intergenic | 45.0% | |
| AGTATCAACTCCAACCACCT+TGG | - | chr8.4:11343904-11343923 | None:intergenic | 45.0% | |
| ATAGACACCCGAGACATTTG+TGG | - | chr8.4:11344105-11344124 | None:intergenic | 45.0% | |
| ATCGCAGATTGTTCCATCCA+TGG | + | chr8.4:11343812-11343831 | MS.gene030130:CDS | 45.0% | |
| CAGATTGTTCCATCCATGGA+TGG | + | chr8.4:11343816-11343835 | MS.gene030130:CDS | 45.0% | |
| CAGCGTTCTCTTGAAAAGCA+AGG | + | chr8.4:11343858-11343877 | MS.gene030130:CDS | 45.0% | |
| CATATTATGGCACCCAATGC+AGG | + | chr8.4:11344431-11344450 | MS.gene030130:CDS | 45.0% | |
| CATCCATGGATGGAGAAATC+CGG | + | chr8.4:11343826-11343845 | MS.gene030130:CDS | 45.0% | |
| CCCGATAACTACAAGCTTCT+TGG | - | chr8.4:11343718-11343737 | None:intergenic | 45.0% | |
| CTGGAGTTCAATACCGTGTT+GGG | + | chr8.4:11344306-11344325 | MS.gene030130:CDS | 45.0% | |
| CTTGTCATAAGTGGCCATTG+CGG | - | chr8.4:11344564-11344583 | None:intergenic | 45.0% | |
| GAAAACGACGTCGTCATCAT+CGG | + | chr8.4:11342080-11342099 | MS.gene030130:CDS | 45.0% | |
| GACAAGCGCTTAGACATGAA+GGG | - | chr8.4:11342806-11342825 | None:intergenic | 45.0% | |
| GAGTACTTAGCTGGTAAGGT+TGG | + | chr8.4:11344194-11344213 | MS.gene030130:CDS | 45.0% | |
| GATGTTGTCCTTGTATCTGC+TGG | + | chr8.4:11343990-11344009 | MS.gene030130:CDS | 45.0% | |
| GCAGTATGATGCATCAAGTG+AGG | + | chr8.4:11344484-11344503 | MS.gene030130:CDS | 45.0% | |
| GCTTGTGTTGAGTACTTAGC+TGG | + | chr8.4:11344185-11344204 | MS.gene030130:CDS | 45.0% | |
| GGAGACGGACAAAATATTGG+GGG | + | chr8.4:11344406-11344425 | MS.gene030130:CDS | 45.0% | |
| GGAGTTGAAACTGACAAGGT+AGG | + | chr8.4:11344053-11344072 | MS.gene030130:CDS | 45.0% | |
| GGGTTTGTATAGACAACACC+TGG | - | chr8.4:11344242-11344261 | None:intergenic | 45.0% | |
| GTCTAAGCGCTTGTCTTAAC+CGG | + | chr8.4:11342811-11342830 | MS.gene030130:intron | 45.0% | |
| GTTTAGCCTCATGGTACATG+TGG | - | chr8.4:11343368-11343387 | None:intergenic | 45.0% | |
| TGAAACTTTGACCCCATGGT+TGG | - | chr8.4:11343400-11343419 | None:intergenic | 45.0% | |
| TGAAAGGGAACTTCCCAACA+CGG | - | chr8.4:11344322-11344341 | None:intergenic | 45.0% | |
| TGCACATCCAACAATGAGTG+AGG | + | chr8.4:11344526-11344545 | MS.gene030130:CDS | 45.0% | |
| TGTAATTCCCGGTCCAATGT+TGG | + | chr8.4:11344136-11344155 | MS.gene030130:CDS | 45.0% | |
| TGTTGGGAAGTTCCCTTTCA+TGG | + | chr8.4:11344322-11344341 | MS.gene030130:CDS | 45.0% | |
| TGTTGTCTATACAAACCCCG+AGG | + | chr8.4:11344244-11344263 | MS.gene030130:CDS | 45.0% | |
| TTATCGGGGCAGGTTACATT+GGG | + | chr8.4:11343730-11343749 | MS.gene030130:CDS | 45.0% | |
| TTCTTCCCACATGTACCATG+AGG | + | chr8.4:11343359-11343378 | MS.gene030130:CDS | 45.0% | |
| TTGTCCTTGTATCTGCTGGT+AGG | + | chr8.4:11343994-11344013 | MS.gene030130:CDS | 45.0% | |
| ! | AAGCTGAGCAGCTTTAATGG+CGG | - | chr8.4:11342129-11342148 | None:intergenic | 45.0% |
| ! | ACCAAGCTGAGCAGCTTTAA+TGG | - | chr8.4:11342132-11342151 | None:intergenic | 45.0% |
| ! | AGGTTACATTGGGCTAGAGA+TGG | + | chr8.4:11343740-11343759 | MS.gene030130:CDS | 45.0% |
| ! | GATTGACTTAGCTGCCATGA+TGG | + | chr8.4:11343428-11343447 | MS.gene030130:CDS | 45.0% |
| ! | GGTTACATTGGGCTAGAGAT+GGG | + | chr8.4:11343741-11343760 | MS.gene030130:CDS | 45.0% |
| ! | GTGGACTATGACAAAGTACC+AGG | + | chr8.4:11344221-11344240 | MS.gene030130:CDS | 45.0% |
| ! | TGACAAGGTAGGACGCATTT+TGG | + | chr8.4:11344064-11344083 | MS.gene030130:CDS | 45.0% |
| !! | AGCTGTTTCTAATCTGACCC+GGG | + | chr8.4:11343464-11343483 | MS.gene030130:CDS | 45.0% |
| !! | GACGTCGTTTTCATCAGATC+CGG | - | chr8.4:11342072-11342091 | None:intergenic | 45.0% |
| !! | GCTGTTTTCTTAAGCTGTCG+TGG | + | chr8.4:11342654-11342673 | MS.gene030130:intron | 45.0% |
| !! | GGTTGGAGTTGATACTTCTG+GGG | + | chr8.4:11343908-11343927 | MS.gene030130:CDS | 45.0% |
| !! | GTGGTTGGAGTTGATACTTC+TGG | + | chr8.4:11343906-11343925 | MS.gene030130:CDS | 45.0% |
| AAGCTTGTAGTTATCGGGGC+AGG | + | chr8.4:11343720-11343739 | MS.gene030130:CDS | 50.0% | |
| AATTGCCTTCGCCCTGCTAT+TGG | - | chr8.4:11344348-11344367 | None:intergenic | 50.0% | |
| ACCACTTGCATCGAAAAGCG+TGG | + | chr8.4:11342158-11342177 | MS.gene030130:CDS | 50.0% | |
| AGGTCAAGAGGTTTCGCTTC+CGG | + | chr8.4:11342050-11342069 | MS.gene030130:CDS | 50.0% | |
| CACTAGGTGGGGTGACTATA+TGG | - | chr8.4:11343243-11343262 | None:intergenic | 50.0% | |
| CAGAGACCTCAGATGGTGAA+AGG | - | chr8.4:11343548-11343567 | None:intergenic | 50.0% | |
| CATATAGTCACCCCACCTAG+TGG | + | chr8.4:11343241-11343260 | MS.gene030130:intron | 50.0% | |
| CCCTGCTATTGGCCATGAAA+GGG | - | chr8.4:11344337-11344356 | None:intergenic | 50.0% | |
| CCCTTTCATGGCCAATAGCA+GGG | + | chr8.4:11344334-11344353 | MS.gene030130:CDS | 50.0% | |
| CGGATTTCTCCATCCATGGA+TGG | - | chr8.4:11343828-11343847 | None:intergenic | 50.0% | |
| CTAACTGTTGAACCAGCAGC+TGG | + | chr8.4:11343942-11343961 | MS.gene030130:CDS | 50.0% | |
| CTTCCCTACAGAAGCAACCT+CGG | - | chr8.4:11344264-11344283 | None:intergenic | 50.0% | |
| CTTCCGGATTTCTCCATCCA+TGG | - | chr8.4:11343832-11343851 | None:intergenic | 50.0% | |
| CTTGTGTGCCAACATTGGAC+CGG | - | chr8.4:11344147-11344166 | None:intergenic | 50.0% | |
| GAAGACAGAGGAGCAGGTTA+AGG | + | chr8.4:11344280-11344299 | MS.gene030130:CDS | 50.0% | |
| GAGAACGCTGAAACTGCTTC+CGG | - | chr8.4:11343848-11343867 | None:intergenic | 50.0% | |
| GAGGAGCAGGTTAAGGAAAC+TGG | + | chr8.4:11344287-11344306 | MS.gene030130:CDS | 50.0% | |
| GAGTCCTACCAGCAGATACA+AGG | - | chr8.4:11344001-11344020 | None:intergenic | 50.0% | |
| GATGCAACCAACGTTGAGAC+AGG | - | chr8.4:11342198-11342217 | None:intergenic | 50.0% | |
| GCACACAAGGCAGAAGAAGA+TGG | + | chr8.4:11344158-11344177 | MS.gene030130:CDS | 50.0% | |
| GCCATTAAAGCTGCTCAGCT+TGG | + | chr8.4:11342128-11342147 | MS.gene030130:CDS | 50.0% | |
| GGCTGTTAAAGAAGCCGCAA+TGG | + | chr8.4:11344547-11344566 | MS.gene030130:CDS | 50.0% | |
| GGGTTCCGCTCTTCTTTCAT+CGG | + | chr8.4:11341998-11342017 | MS.gene030130:CDS | 50.0% | |
| GGTAGGACTCCATTCACTTC+TGG | + | chr8.4:11344011-11344030 | MS.gene030130:CDS | 50.0% | |
| GTCTCGGGTGTCTATGCAAT+TGG | + | chr8.4:11344110-11344129 | MS.gene030130:CDS | 50.0% | |
| GTCTCTGTAGACACCGTTGA+AGG | + | chr8.4:11343561-11343580 | MS.gene030130:CDS | 50.0% | |
| GTGTCTACAGAGACCTCAGA+TGG | - | chr8.4:11343555-11343574 | None:intergenic | 50.0% | |
| GTTATCGGGGCAGGTTACAT+TGG | + | chr8.4:11343729-11343748 | MS.gene030130:CDS | 50.0% | |
| TCACCCCACCTAGTGGAATA+TGG | + | chr8.4:11343248-11343267 | MS.gene030130:intron | 50.0% | |
| TCCCTTTCATGGCCAATAGC+AGG | + | chr8.4:11344333-11344352 | MS.gene030130:CDS | 50.0% | |
| TCTGCCTTGTGTGCCAACAT+TGG | - | chr8.4:11344152-11344171 | None:intergenic | 50.0% | |
| TGCTTCTGTAGGGAAGACAG+AGG | + | chr8.4:11344268-11344287 | MS.gene030130:CDS | 50.0% | |
| TTCCCTACAGAAGCAACCTC+GGG | - | chr8.4:11344263-11344282 | None:intergenic | 50.0% | |
| TTCCGCTCTTCTTTCATCGG+CGG | + | chr8.4:11342001-11342020 | MS.gene030130:CDS | 50.0% | |
| TTGTGTGCCAACATTGGACC+GGG | - | chr8.4:11344146-11344165 | None:intergenic | 50.0% | |
| ! | ACCACGCTTTTCGATGCAAG+TGG | - | chr8.4:11342162-11342181 | None:intergenic | 50.0% |
| ! | ATCGAAAAGCGTGGTGCTCT+TGG | + | chr8.4:11342167-11342186 | MS.gene030130:CDS | 50.0% |
| ! | CTAGAGATGGGCTCTGTATG+GGG | + | chr8.4:11343753-11343772 | MS.gene030130:CDS | 50.0% |
| ! | GCTAGAGATGGGCTCTGTAT+GGG | + | chr8.4:11343752-11343771 | MS.gene030130:CDS | 50.0% |
| !! | AATCTGACCCGGGGTATTGA+AGG | + | chr8.4:11343474-11343493 | MS.gene030130:CDS | 50.0% |
| !! | GCTGTTTCTAATCTGACCCG+GGG | + | chr8.4:11343465-11343484 | MS.gene030130:CDS | 50.0% |
| !! | GGAGTTGATACTTCTGGGGA+TGG | + | chr8.4:11343912-11343931 | MS.gene030130:CDS | 50.0% |
| AACCCCGAGGTTGCTTCTGT+AGG | + | chr8.4:11344257-11344276 | MS.gene030130:CDS | 55.0% | |
| AACGACGTCGTCATCATCGG+TGG | + | chr8.4:11342083-11342102 | MS.gene030130:CDS | 55.0% | |
| ACCCCGAGGTTGCTTCTGTA+GGG | + | chr8.4:11344258-11344277 | MS.gene030130:CDS | 55.0% | |
| ACTGTTGAACCAGCAGCTGG+TGG | + | chr8.4:11343945-11343964 | MS.gene030130:CDS | 55.0% | |
| AGCTGGTAAGGTTGGGCATG+TGG | + | chr8.4:11344202-11344221 | MS.gene030130:CDS | 55.0% | |
| CGGTCCAATGTTGGCACACA+AGG | + | chr8.4:11344145-11344164 | MS.gene030130:CDS | 55.0% | |
| CTCCGCCGATGAAAGAAGAG+CGG | - | chr8.4:11342006-11342025 | None:intergenic | 55.0% | |
| GCCCTGCTATTGGCCATGAA+AGG | - | chr8.4:11344338-11344357 | None:intergenic | 55.0% | |
| GGCTCTGTATGGGGACGAAT+TGG | + | chr8.4:11343762-11343781 | MS.gene030130:CDS | 55.0% | |
| GGTGGTACCTGTCTCAACGT+TGG | + | chr8.4:11342188-11342207 | MS.gene030130:CDS | 55.0% | |
| TCCCTACAGAAGCAACCTCG+GGG | - | chr8.4:11344262-11344281 | None:intergenic | 55.0% | |
| TGTAGGGAAGACAGAGGAGC+AGG | + | chr8.4:11344274-11344293 | MS.gene030130:CDS | 55.0% | |
| ! | CGTTGGTTGCATCCCTTCCA+AGG | + | chr8.4:11342205-11342224 | MS.gene030130:CDS | 55.0% |
| ! | CTATGGCGAACTTGGCTCGT+AGG | + | chr8.4:11341973-11341992 | MS.gene030130:CDS | 55.0% |
| ! | GAAAAGCGTGGTGCTCTTGG+TGG | + | chr8.4:11342170-11342189 | MS.gene030130:CDS | 55.0% |
| ! | GCGAACTTGGCTCGTAGGAA+GGG | + | chr8.4:11341978-11341997 | MS.gene030130:CDS | 55.0% |
| ! | GGCTAGAGATGGGCTCTGTA+TGG | + | chr8.4:11343751-11343770 | MS.gene030130:CDS | 55.0% |
| !! | ATGGGGACGAATTGGCTCTG+AGG | + | chr8.4:11343770-11343789 | MS.gene030130:CDS | 55.0% |
| CATGGCCAATAGCAGGGCGA+AGG | + | chr8.4:11344340-11344359 | MS.gene030130:CDS | 60.0% | |
| GACGTCGTCATCATCGGTGG+TGG | + | chr8.4:11342086-11342105 | MS.gene030130:CDS | 60.0% | |
| GTCTGTTCACCACCAGCTGC+TGG | - | chr8.4:11343957-11343976 | None:intergenic | 60.0% | |
| ! | GGCGAACTTGGCTCGTAGGA+AGG | + | chr8.4:11341977-11341996 | MS.gene030130:CDS | 60.0% |
| ! | GTCATCATCGGTGGTGGTCC+CGG | + | chr8.4:11342092-11342111 | MS.gene030130:CDS | 60.0% |
| AATGGCGGCGACGTAACCGC+CGG | - | chr8.4:11342114-11342133 | None:intergenic | 65.0% | |
| ! | ATCATCGGTGGTGGTCCCGG+CGG | + | chr8.4:11342095-11342114 | MS.gene030130:CDS | 65.0% |
| ATGGCGGCGACGTAACCGCC+GGG | - | chr8.4:11342113-11342132 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 11341969 | 11344598 | 11341969 | ID=MS.gene030130 |
| chr8.4 | mRNA | 11341969 | 11344598 | 11341969 | ID=MS.gene030130.t1;Parent=MS.gene030130 |
| chr8.4 | exon | 11341969 | 11342226 | 11341969 | ID=MS.gene030130.t1.exon1;Parent=MS.gene030130.t1 |
| chr8.4 | CDS | 11341969 | 11342226 | 11341969 | ID=cds.MS.gene030130.t1;Parent=MS.gene030130.t1 |
| chr8.4 | exon | 11343348 | 11344598 | 11343348 | ID=MS.gene030130.t1.exon2;Parent=MS.gene030130.t1 |
| chr8.4 | CDS | 11343348 | 11344598 | 11343348 | ID=cds.MS.gene030130.t1;Parent=MS.gene030130.t1 |
| Gene Sequence |
| Protein sequence |
