Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74672.t1 | XP_013451659.1 | 99.6 | 498 | 2 | 0 | 1 | 498 | 1 | 498 | 4.40E-287 | 996.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74672.t1 | Q43621 | 90.8 | 498 | 46 | 0 | 1 | 498 | 1 | 498 | 1.8e-265 | 916.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74672.t1 | I3TAS1 | 99.6 | 498 | 2 | 0 | 1 | 498 | 1 | 498 | 3.2e-287 | 996.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053058 | MS.gene74672 | 0.819286 | 1.26E-52 | -1.69E-46 |
| MS.gene05344 | MS.gene74672 | -0.800486 | 1.41E-48 | -1.69E-46 |
| MS.gene056975 | MS.gene74672 | 0.81035 | 1.20E-50 | -1.69E-46 |
| MS.gene056992 | MS.gene74672 | 0.816954 | 4.24E-52 | -1.69E-46 |
| MS.gene057234 | MS.gene74672 | 0.817699 | 2.88E-52 | -1.69E-46 |
| MS.gene05781 | MS.gene74672 | 0.811393 | 7.16E-51 | -1.69E-46 |
| MS.gene057999 | MS.gene74672 | 0.832933 | 7.13E-56 | -1.69E-46 |
| MS.gene058054 | MS.gene74672 | 0.824014 | 1.02E-53 | -1.69E-46 |
| MS.gene058055 | MS.gene74672 | 0.826862 | 2.15E-54 | -1.69E-46 |
| MS.gene06118 | MS.gene74672 | 0.8087 | 2.72E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72691 | MS.gene74672 | PPI |
| MS.gene74672 | MS.gene042299 | PPI |
| MS.gene74672 | MS.gene030130 | PPI |
| MS.gene74672 | MS.gene49348 | PPI |
| MS.gene74672 | MS.gene39910 | PPI |
| MS.gene74672 | MS.gene65292 | PPI |
| MS.gene74672 | MS.gene50577 | PPI |
| MS.gene74672 | MS.gene86513 | PPI |
| MS.gene74672 | MS.gene26810 | PPI |
| MS.gene68603 | MS.gene74672 | PPI |
| MS.gene74672 | MS.gene061224 | PPI |
| MS.gene74672 | MS.gene82505 | PPI |
| MS.gene74672 | MS.gene036155 | PPI |
| MS.gene70673 | MS.gene74672 | PPI |
| MS.gene88347 | MS.gene74672 | PPI |
| MS.gene74672 | MS.gene56912 | PPI |
| MS.gene74672 | MS.gene058213 | PPI |
| MS.gene74672 | MS.gene56014 | PPI |
| MS.gene011327 | MS.gene74672 | PPI |
| MS.gene74672 | MS.gene00186 | PPI |
| MS.gene74672 | MS.gene48333 | PPI |
| MS.gene74672 | MS.gene033288 | PPI |
| MS.gene74672 | MS.gene24749 | PPI |
| MS.gene74672 | MS.gene022347 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74672.t1 | MTR_6g033515 | 99.598 | 498 | 2 | 0 | 1 | 498 | 1 | 498 | 0.0 | 1020 |
| MS.gene74672.t1 | MTR_6g033515 | 97.255 | 510 | 2 | 1 | 1 | 498 | 1 | 510 | 0.0 | 1011 |
| MS.gene74672.t1 | MTR_1g070505 | 52.830 | 477 | 218 | 5 | 16 | 491 | 66 | 536 | 4.26e-173 | 499 |
| MS.gene74672.t1 | MTR_4g123070 | 30.787 | 445 | 281 | 9 | 48 | 476 | 53 | 486 | 2.68e-58 | 201 |
| MS.gene74672.t1 | MTR_2g034580 | 28.838 | 482 | 296 | 13 | 22 | 476 | 82 | 543 | 2.74e-41 | 156 |
| MS.gene74672.t1 | MTR_2g034580 | 28.838 | 482 | 296 | 13 | 22 | 476 | 82 | 543 | 8.56e-41 | 155 |
| MS.gene74672.t1 | MTR_0644s0030 | 30.890 | 382 | 245 | 9 | 16 | 392 | 296 | 663 | 3.77e-39 | 152 |
| MS.gene74672.t1 | MTR_4g121880 | 28.986 | 483 | 294 | 14 | 22 | 476 | 79 | 540 | 7.44e-39 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74672.t1 | AT3G24170 | 78.758 | 499 | 105 | 1 | 1 | 498 | 1 | 499 | 0.0 | 832 |
| MS.gene74672.t1 | AT3G24170 | 78.758 | 499 | 105 | 1 | 1 | 498 | 1 | 499 | 0.0 | 832 |
| MS.gene74672.t1 | AT3G24170 | 78.758 | 499 | 105 | 1 | 1 | 498 | 1 | 499 | 0.0 | 832 |
| MS.gene74672.t1 | AT3G54660 | 53.053 | 475 | 216 | 4 | 14 | 487 | 77 | 545 | 1.63e-176 | 508 |
| MS.gene74672.t1 | AT1G48030 | 30.822 | 438 | 290 | 9 | 48 | 476 | 58 | 491 | 1.24e-54 | 191 |
| MS.gene74672.t1 | AT1G48030 | 30.822 | 438 | 290 | 9 | 48 | 476 | 58 | 491 | 1.24e-54 | 191 |
| MS.gene74672.t1 | AT1G48030 | 30.822 | 438 | 290 | 9 | 48 | 476 | 58 | 491 | 1.24e-54 | 191 |
| MS.gene74672.t1 | AT1G48030 | 30.822 | 438 | 290 | 9 | 48 | 476 | 58 | 491 | 1.24e-54 | 191 |
| MS.gene74672.t1 | AT1G48030 | 30.822 | 438 | 290 | 9 | 48 | 476 | 58 | 491 | 1.24e-54 | 191 |
| MS.gene74672.t1 | AT3G17240 | 30.543 | 442 | 286 | 9 | 48 | 476 | 58 | 491 | 9.11e-54 | 189 |
| MS.gene74672.t1 | AT3G17240 | 30.543 | 442 | 286 | 9 | 48 | 476 | 58 | 491 | 9.11e-54 | 189 |
| MS.gene74672.t1 | AT3G16950 | 29.297 | 512 | 302 | 16 | 22 | 497 | 84 | 571 | 5.08e-38 | 147 |
| MS.gene74672.t1 | AT3G16950 | 29.193 | 483 | 292 | 14 | 22 | 476 | 84 | 544 | 1.10e-37 | 145 |
| MS.gene74672.t1 | AT4G16155 | 27.349 | 479 | 305 | 13 | 22 | 476 | 82 | 541 | 4.53e-34 | 135 |
Find 132 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACTTTGACTTGTTTATTAT+TGG | 0.132102 | 6.3:+23172841 | MS.gene74672:CDS |
| ACTTTGACTTGTTTATTATT+GGG | 0.203664 | 6.3:+23172842 | MS.gene74672:CDS |
| TGATAGGATGCTAGAAATTT+TGG | 0.205462 | 6.3:+23174929 | MS.gene74672:intron |
| CAAACCTGGCCAGGAATATT+TGG | 0.211690 | 6.3:-23176866 | None:intergenic |
| AAATTTAACCTCTTAGAATT+AGG | 0.230809 | 6.3:-23180091 | None:intergenic |
| GATGAAATTAACAGATTAAA+TGG | 0.233774 | 6.3:+23176683 | MS.gene74672:CDS |
| GCAAACAAACGGCGATTTAT+TGG | 0.239901 | 6.3:+23182058 | MS.gene74672:CDS |
| AATAGTACCTGAACAATTTC+AGG | 0.254273 | 6.3:-23183229 | None:intergenic |
| CAAAATATGCTTTGCCGAAT+AGG | 0.271504 | 6.3:-23176816 | None:intergenic |
| TATATGCAGAACACAGTATT+TGG | 0.297384 | 6.3:+23181785 | MS.gene74672:intron |
| CCTAAACGTGTTGTGATTCT+TGG | 0.305529 | 6.3:+23178586 | MS.gene74672:CDS |
| TTGGTCTATGGAGCATCTTA+TGG | 0.308485 | 6.3:+23173337 | MS.gene74672:CDS |
| TGGTCTATGGAGCATCTTAT+GGG | 0.314587 | 6.3:+23173338 | MS.gene74672:CDS |
| TCTGCACCTTTGTTCAAATC+AGG | 0.328073 | 6.3:-23172802 | None:intergenic |
| AAACACAGAAGCCAGATTAT+AGG | 0.330345 | 6.3:+23181813 | MS.gene74672:CDS |
| CAGTTGAGTTTGCATCTATA+TGG | 0.333704 | 6.3:+23178706 | MS.gene74672:CDS |
| AATTAATTCCCCTGCCTTCA+AGG | 0.347785 | 6.3:-23179319 | None:intergenic |
| CCAAGAATCACAACACGTTT+AGG | 0.350302 | 6.3:-23178586 | None:intergenic |
| TCTTACCCCGGTGGCCTTGA+TGG | 0.374242 | 6.3:+23181623 | MS.gene74672:CDS |
| GCTCAGACAGATAAAGTTCT+TGG | 0.374279 | 6.3:+23183181 | MS.gene74672:CDS |
| AACACAGAAGCCAGATTATA+GGG | 0.379325 | 6.3:+23181814 | MS.gene74672:CDS |
| TCAGTGACAAGGCGTGTTAC+CGG | 0.395787 | 6.3:+23185644 | MS.gene74672:CDS |
| GTGAGAATATTGACTTCAAT+TGG | 0.403072 | 6.3:+23174963 | MS.gene74672:CDS |
| TTTATTATTGGGGCTGGAAG+TGG | 0.403148 | 6.3:+23172853 | MS.gene74672:CDS |
| TGTGTTTACAAATTCGTCTT+GGG | 0.405610 | 6.3:-23185677 | None:intergenic |
| GCACCAACATCCCAAGCATA+TGG | 0.406887 | 6.3:+23181571 | MS.gene74672:CDS |
| ATATTCCATACGCAGTGTTC+AGG | 0.409922 | 6.3:+23181837 | MS.gene74672:CDS |
| CGATGCACCTGAAATTGTTC+AGG | 0.411857 | 6.3:+23183222 | MS.gene74672:CDS |
| TGGTACTAAATTGTCCTATT+CGG | 0.417841 | 6.3:+23176802 | MS.gene74672:CDS |
| TGATGAGGCTCTAAGTTTAG+AGG | 0.418556 | 6.3:+23178558 | MS.gene74672:CDS |
| GCTCAACGTCCAAATATTCC+TGG | 0.419464 | 6.3:+23176857 | MS.gene74672:CDS |
| ATTCCACCACTTTCAGTAGT+TGG | 0.422213 | 6.3:+23182011 | MS.gene74672:CDS |
| CTTTGACTTGTTTATTATTG+GGG | 0.447524 | 6.3:+23172843 | MS.gene74672:CDS |
| TATGGAATATCCCTATAATC+TGG | 0.448617 | 6.3:-23181824 | None:intergenic |
| AAGCGGTTGTTATCCAATGC+TGG | 0.450658 | 6.3:+23176713 | MS.gene74672:CDS |
| CGTCTTGGGCTTCGCACTAC+CGG | 0.451109 | 6.3:-23185663 | None:intergenic |
| CCAATCGTTTCTGAGCTAAT+CGG | 0.458626 | 6.3:-23173174 | None:intergenic |
| TGCATCTATATGGCGCGGGA+TGG | 0.460255 | 6.3:+23178716 | MS.gene74672:CDS |
| ATGTGTTTACAAATTCGTCT+TGG | 0.463351 | 6.3:-23185678 | None:intergenic |
| ACGTCCAAATATTCCTGGCC+AGG | 0.467131 | 6.3:+23176862 | MS.gene74672:CDS |
| GCTGGGGTTAAACTATTTGA+AGG | 0.468149 | 6.3:+23176731 | MS.gene74672:CDS |
| AAATAGTTTAACCCCAGCAT+TGG | 0.469001 | 6.3:-23176726 | None:intergenic |
| CTATACCTGAACACTGCGTA+TGG | 0.472477 | 6.3:-23181842 | None:intergenic |
| GCATCTATATGGCGCGGGAT+GGG | 0.473469 | 6.3:+23178717 | MS.gene74672:CDS |
| ATTATTGGGGCTGGAAGTGG+TGG | 0.473961 | 6.3:+23172856 | MS.gene74672:CDS |
| AGCCCATATGCTTGGGATGT+TGG | 0.474739 | 6.3:-23181574 | None:intergenic |
| GACGCTTCCATCAAGGCCAC+CGG | 0.478307 | 6.3:-23181630 | None:intergenic |
| TCACCCACAGCCCATATGCT+TGG | 0.479565 | 6.3:-23181582 | None:intergenic |
| TGAACAATTTCAGGTGCATC+GGG | 0.483749 | 6.3:-23183220 | None:intergenic |
| AGCGGTTGTTATCCAATGCT+GGG | 0.485898 | 6.3:+23176714 | MS.gene74672:CDS |
| CACCCACAGCCCATATGCTT+GGG | 0.486272 | 6.3:-23181581 | None:intergenic |
| TCTGAGCTAATCGGATGAAA+AGG | 0.487124 | 6.3:-23173165 | None:intergenic |
| GACTTGTTTATTATTGGGGC+TGG | 0.489300 | 6.3:+23172847 | MS.gene74672:CDS |
| ACCTGTGTCAAATTTGTCCT+TGG | 0.492284 | 6.3:-23179347 | None:intergenic |
| TTGAACAAAGGTGCAGAAGA+AGG | 0.495116 | 6.3:+23172808 | MS.gene74672:CDS |
| TTTCAAAGGTGTGTCATTCG+TGG | 0.497091 | 6.3:+23173295 | MS.gene74672:intron |
| GCTAGATTCTCATCTAATCA+TGG | 0.501677 | 6.3:+23172889 | MS.gene74672:CDS |
| CCACCGGGGTAAGATTCATT+CGG | 0.502568 | 6.3:-23181614 | None:intergenic |
| TGATAAGACAGGAGCAATAG+TGG | 0.502695 | 6.3:+23180135 | MS.gene74672:CDS |
| TGCAAGAAACCTTGAAGGCA+GGG | 0.503594 | 6.3:+23179310 | MS.gene74672:CDS |
| GTAGTTGCAAGAAACCTTGA+AGG | 0.510124 | 6.3:+23179305 | MS.gene74672:CDS |
| CACCAACATCCCAAGCATAT+GGG | 0.511222 | 6.3:+23181572 | MS.gene74672:CDS |
| CATCCCAAGCATATGGGCTG+TGG | 0.512330 | 6.3:+23181578 | MS.gene74672:CDS |
| ACAAGAAAACAAACCTGGCC+AGG | 0.514533 | 6.3:-23176875 | None:intergenic |
| CTCATCTAATCATGGAGCTA+AGG | 0.514793 | 6.3:+23172897 | MS.gene74672:CDS |
| TCTGAAAACAAGATTGACAT+TGG | 0.515323 | 6.3:-23178742 | None:intergenic |
| CTGAACAATTTCAGGTGCAT+CGG | 0.517509 | 6.3:-23183221 | None:intergenic |
| TTGCAAGAAACCTTGAAGGC+AGG | 0.517629 | 6.3:+23179309 | MS.gene74672:CDS |
| ACGCTTCCATCAAGGCCACC+GGG | 0.517872 | 6.3:-23181629 | None:intergenic |
| AAACGTGTTGTGATTCTTGG+TGG | 0.520608 | 6.3:+23178589 | MS.gene74672:CDS |
| GGCGTAGAGGTTGATAAGAC+AGG | 0.522960 | 6.3:+23180124 | MS.gene74672:CDS |
| GGTCTATGGAGCATCTTATG+GGG | 0.528009 | 6.3:+23173339 | MS.gene74672:CDS |
| GGGGAATTAATTTGCATCCA+AGG | 0.528009 | 6.3:+23179330 | MS.gene74672:CDS |
| ATTTCAAAGCCACACCTCAA+TGG | 0.533543 | 6.3:-23178774 | None:intergenic |
| AGTTGGTCTAAGTGAGGAGG+AGG | 0.534996 | 6.3:+23182028 | MS.gene74672:CDS |
| CGGGGTAAGATTCATTCGGT+TGG | 0.544946 | 6.3:-23181610 | None:intergenic |
| CCGATTAGCTCAGAAACGAT+TGG | 0.549146 | 6.3:+23173174 | MS.gene74672:CDS |
| CTTAGACCAACTACTGAAAG+TGG | 0.550462 | 6.3:-23182017 | None:intergenic |
| GTTAAACTATTTGAAGGTGA+GGG | 0.554309 | 6.3:+23176737 | MS.gene74672:CDS |
| TTCTTGGAGCATCTATGTGT+GGG | 0.554752 | 6.3:+23183197 | MS.gene74672:CDS |
| GATGGCTAGAAAGATGCTTA+AGG | 0.555131 | 6.3:+23172771 | None:intergenic |
| ACAAATTCTTCTGCAGCCGA+TGG | 0.561656 | 6.3:-23185611 | None:intergenic |
| GAAGGTGAGGGTAAGATAGC+GGG | 0.562962 | 6.3:+23176749 | MS.gene74672:CDS |
| TAGTTGGTCAAAACAGAGGA+TGG | 0.573245 | 6.3:+23179473 | MS.gene74672:intron |
| GAAGGGCTCCTAATTCTAAG+AGG | 0.574025 | 6.3:+23180083 | MS.gene74672:CDS |
| GTTCTTGGAGCATCTATGTG+TGG | 0.574988 | 6.3:+23183196 | MS.gene74672:CDS |
| GAAGAAGCTCTTGCAAAAGA+AGG | 0.576475 | 6.3:+23174985 | MS.gene74672:CDS |
| GTCTATGGAGCATCTTATGG+GGG | 0.576831 | 6.3:+23173340 | MS.gene74672:CDS |
| CGTGTTGTGATTCTTGGTGG+AGG | 0.578229 | 6.3:+23178592 | MS.gene74672:CDS |
| GATGTTGTGCTATTTGCCAC+TGG | 0.578774 | 6.3:+23179536 | MS.gene74672:CDS |
| ATCCCAAGCATATGGGCTGT+GGG | 0.579689 | 6.3:+23181579 | MS.gene74672:CDS |
| GGTTAAACTATTTGAAGGTG+AGG | 0.581246 | 6.3:+23176736 | MS.gene74672:CDS |
| ATGCAGAACACAGTATTTGG+TGG | 0.584173 | 6.3:+23181788 | MS.gene74672:intron |
| TGAACAAAGGTGCAGAAGAA+GGG | 0.584787 | 6.3:+23172809 | MS.gene74672:CDS |
| TCAGAAAGGAACTTCCATTG+AGG | 0.585951 | 6.3:+23178760 | MS.gene74672:CDS |
| ACGCCTTGTCACTGAGCGCA+TGG | 0.587436 | 6.3:-23185636 | None:intergenic |
| AGTTTGCATCTATATGGCGC+GGG | 0.587881 | 6.3:+23178712 | MS.gene74672:CDS |
| TGACCATGCGCTCAGTGACA+AGG | 0.588484 | 6.3:+23185633 | MS.gene74672:CDS |
| TGCAGAACACAGTATTTGGT+GGG | 0.592588 | 6.3:+23181789 | MS.gene74672:intron |
| TAAAGCACAGTTTGATAGCA+CGG | 0.594753 | 6.3:+23184916 | MS.gene74672:CDS |
| TTTGATTGCAACTGGCAGCA+GGG | 0.595631 | 6.3:+23176835 | MS.gene74672:CDS |
| CTTCTAGTTGGTCAAAACAG+AGG | 0.596121 | 6.3:+23179469 | MS.gene74672:intron |
| ATTAAAGTTACTACAGATCA+CGG | 0.596617 | 6.3:+23179497 | MS.gene74672:CDS |
| AGCGGGTCCACATGAAGTTG+AGG | 0.599121 | 6.3:+23176766 | MS.gene74672:CDS |
| GAGGCAATAGAGCAAACAAA+CGG | 0.599903 | 6.3:+23182047 | MS.gene74672:CDS |
| GCAAGAAACCTTGAAGGCAG+GGG | 0.599907 | 6.3:+23179311 | MS.gene74672:CDS |
| TGTGTCACCTCAACTTCATG+TGG | 0.600483 | 6.3:-23176773 | None:intergenic |
| GAGTTTGCATCTATATGGCG+CGG | 0.600824 | 6.3:+23178711 | MS.gene74672:CDS |
| TTCAGTAGTTGGTCTAAGTG+AGG | 0.600847 | 6.3:+23182022 | MS.gene74672:CDS |
| AAAGTGTGACGCTTCCATCA+AGG | 0.603206 | 6.3:-23181637 | None:intergenic |
| TCAGAAACGATTGGAGGAGT+CGG | 0.606991 | 6.3:+23173183 | MS.gene74672:CDS |
| GAAACGATTGGAGGAGTCGG+TGG | 0.611745 | 6.3:+23173186 | MS.gene74672:CDS |
| AGTAGTTGGTCTAAGTGAGG+AGG | 0.616299 | 6.3:+23182025 | MS.gene74672:CDS |
| CAACCGAATGAATCTTACCC+CGG | 0.621840 | 6.3:+23181611 | MS.gene74672:CDS |
| ATTAGCTCAGAAACGATTGG+AGG | 0.635464 | 6.3:+23173177 | MS.gene74672:CDS |
| GATTAAATGGAATTTACAAG+CGG | 0.641435 | 6.3:+23176696 | MS.gene74672:CDS |
| GTTGGGTATAACATCTGATG+AGG | 0.641780 | 6.3:+23178543 | MS.gene74672:CDS |
| GCGGTTGTTATCCAATGCTG+GGG | 0.642376 | 6.3:+23176715 | MS.gene74672:CDS |
| TGAAGTTGAGGTGACACAGT+TGG | 0.642411 | 6.3:+23176778 | MS.gene74672:CDS |
| GGTGAACCTGATTTGAACAA+AGG | 0.648232 | 6.3:+23172796 | MS.gene74672:CDS |
| GTGTTGTGATTCTTGGTGGA+GGG | 0.649427 | 6.3:+23178593 | MS.gene74672:CDS |
| ATTGCTATTGCATTGAAGTG+TGG | 0.651076 | 6.3:+23184887 | MS.gene74672:CDS |
| TCACGGTGAGGAGTTGATTG+CGG | 0.658352 | 6.3:+23179514 | MS.gene74672:CDS |
| GTAGGTGGGAATACATCCAT+CGG | 0.660503 | 6.3:+23185595 | MS.gene74672:intron |
| TGAAGGTGAGGGTAAGATAG+CGG | 0.661127 | 6.3:+23176748 | MS.gene74672:CDS |
| TCCAAGGACAAATTTGACAC+AGG | 0.672447 | 6.3:+23179346 | MS.gene74672:CDS |
| GCTAGAAAGATGCTTAAGGA+CGG | 0.674786 | 6.3:+23172775 | MS.gene74672:CDS |
| GTTGAGGTGACACAGTTGGA+TGG | 0.675416 | 6.3:+23176782 | MS.gene74672:CDS |
| AGACCAACTACTGAAAGTGG+TGG | 0.682450 | 6.3:-23182014 | None:intergenic |
| CGCTTCCATCAAGGCCACCG+GGG | 0.707640 | 6.3:-23181628 | None:intergenic |
| CCGAATGAATCTTACCCCGG+TGG | 0.721442 | 6.3:+23181614 | MS.gene74672:CDS |
| AGTTACTACAGATCACGGTG+AGG | 0.773233 | 6.3:+23179502 | MS.gene74672:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 23172772 | 23185694 | 23172772 | ID=MS.gene74672 |
| chr6.3 | mRNA | 23172772 | 23185694 | 23172772 | ID=MS.gene74672.t1;Parent=MS.gene74672 |
| chr6.3 | exon | 23172772 | 23172918 | 23172772 | ID=MS.gene74672.t1.exon1;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23172772 | 23172918 | 23172772 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| chr6.3 | exon | 23173147 | 23173211 | 23173147 | ID=MS.gene74672.t1.exon2;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23173147 | 23173211 | 23173147 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| chr6.3 | exon | 23173303 | 23173372 | 23173303 | ID=MS.gene74672.t1.exon3;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23173303 | 23173372 | 23173303 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| chr6.3 | exon | 23174935 | 23175006 | 23174935 | ID=MS.gene74672.t1.exon4;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23174935 | 23175006 | 23174935 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| chr6.3 | exon | 23176680 | 23176883 | 23176680 | ID=MS.gene74672.t1.exon5;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23176680 | 23176883 | 23176680 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| chr6.3 | exon | 23178541 | 23178614 | 23178541 | ID=MS.gene74672.t1.exon6;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23178541 | 23178614 | 23178541 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| chr6.3 | exon | 23178698 | 23178781 | 23178698 | ID=MS.gene74672.t1.exon7;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23178698 | 23178781 | 23178698 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| chr6.3 | exon | 23179280 | 23179367 | 23179280 | ID=MS.gene74672.t1.exon8;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23179280 | 23179367 | 23179280 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| chr6.3 | exon | 23179476 | 23179557 | 23179476 | ID=MS.gene74672.t1.exon9;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23179476 | 23179557 | 23179476 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| chr6.3 | exon | 23180083 | 23180156 | 23180083 | ID=MS.gene74672.t1.exon10;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23180083 | 23180156 | 23180083 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| chr6.3 | exon | 23181555 | 23181662 | 23181555 | ID=MS.gene74672.t1.exon11;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23181555 | 23181662 | 23181555 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| chr6.3 | exon | 23181794 | 23181858 | 23181794 | ID=MS.gene74672.t1.exon12;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23181794 | 23181858 | 23181794 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| chr6.3 | exon | 23182010 | 23182123 | 23182010 | ID=MS.gene74672.t1.exon13;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23182010 | 23182123 | 23182010 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| chr6.3 | exon | 23183144 | 23183243 | 23183144 | ID=MS.gene74672.t1.exon14;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23183144 | 23183243 | 23183144 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| chr6.3 | exon | 23184884 | 23184937 | 23184884 | ID=MS.gene74672.t1.exon15;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23184884 | 23184937 | 23184884 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| chr6.3 | exon | 23185599 | 23185694 | 23185599 | ID=MS.gene74672.t1.exon16;Parent=MS.gene74672.t1 |
| chr6.3 | CDS | 23185599 | 23185694 | 23185599 | ID=cds.MS.gene74672.t1;Parent=MS.gene74672.t1 |
| Gene Sequence |
| Protein sequence |
