Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68603.t1 | XP_013458339.1 | 99.6 | 502 | 2 | 0 | 1 | 502 | 1 | 502 | 2.20E-278 | 967.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68603.t1 | P31023 | 96.4 | 502 | 17 | 1 | 1 | 502 | 1 | 501 | 4.1e-273 | 941.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68603.t1 | A0A072V2R0 | 99.6 | 502 | 2 | 0 | 1 | 502 | 1 | 502 | 1.6e-278 | 967.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene061224 | MS.gene68603 | 0.806826 | 6.81E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene68603 | MS.gene058213 | PPI |
| MS.gene68603 | MS.gene65554 | PPI |
| MS.gene68603 | MS.gene56014 | PPI |
| MS.gene68603 | MS.gene011262 | PPI |
| MS.gene68603 | MS.gene53350 | PPI |
| MS.gene68603 | MS.gene00186 | PPI |
| MS.gene68603 | MS.gene74672 | PPI |
| MS.gene68603 | MS.gene052712 | PPI |
| MS.gene68603 | MS.gene019928 | PPI |
| MS.gene68603 | MS.gene07846 | PPI |
| MS.gene68603 | MS.gene042299 | PPI |
| MS.gene68603 | MS.gene030130 | PPI |
| MS.gene68603 | MS.gene65292 | PPI |
| MS.gene68603 | MS.gene26810 | PPI |
| MS.gene68603 | MS.gene061224 | PPI |
| MS.gene68603 | MS.gene67036 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68603.t1 | MTR_4g123070 | 99.602 | 502 | 2 | 0 | 1 | 502 | 1 | 502 | 0.0 | 1015 |
| MS.gene68603.t1 | MTR_2g034580 | 35.892 | 482 | 286 | 11 | 26 | 490 | 72 | 547 | 7.23e-76 | 249 |
| MS.gene68603.t1 | MTR_4g121880 | 35.388 | 503 | 294 | 11 | 5 | 490 | 56 | 544 | 8.07e-76 | 249 |
| MS.gene68603.t1 | MTR_2g034580 | 35.892 | 482 | 286 | 11 | 26 | 490 | 72 | 547 | 1.76e-75 | 249 |
| MS.gene68603.t1 | MTR_6g033515 | 31.263 | 467 | 285 | 10 | 40 | 486 | 26 | 476 | 4.16e-61 | 208 |
| MS.gene68603.t1 | MTR_6g033515 | 30.417 | 480 | 284 | 12 | 40 | 486 | 26 | 488 | 1.61e-56 | 196 |
| MS.gene68603.t1 | MTR_1g070505 | 27.959 | 490 | 320 | 11 | 15 | 486 | 47 | 521 | 8.04e-49 | 176 |
| MS.gene68603.t1 | MTR_0644s0030 | 30.105 | 382 | 256 | 8 | 31 | 409 | 296 | 669 | 1.02e-36 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68603.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene68603.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene68603.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene68603.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene68603.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene68603.t1 | AT3G17240 | 85.630 | 508 | 66 | 3 | 1 | 502 | 1 | 507 | 0.0 | 872 |
| MS.gene68603.t1 | AT3G17240 | 85.630 | 508 | 66 | 3 | 1 | 502 | 1 | 507 | 0.0 | 872 |
| MS.gene68603.t1 | AT3G16950 | 34.989 | 463 | 257 | 11 | 55 | 490 | 103 | 548 | 6.73e-73 | 241 |
| MS.gene68603.t1 | AT4G16155 | 35.637 | 463 | 253 | 12 | 55 | 490 | 101 | 545 | 6.92e-73 | 241 |
| MS.gene68603.t1 | AT3G16950 | 34.989 | 463 | 257 | 11 | 55 | 490 | 103 | 548 | 2.05e-72 | 241 |
| MS.gene68603.t1 | AT3G24170 | 29.374 | 463 | 299 | 11 | 40 | 486 | 27 | 477 | 5.76e-53 | 187 |
| MS.gene68603.t1 | AT3G24170 | 29.374 | 463 | 299 | 11 | 40 | 486 | 27 | 477 | 5.76e-53 | 187 |
| MS.gene68603.t1 | AT3G24170 | 29.374 | 463 | 299 | 11 | 40 | 486 | 27 | 477 | 5.76e-53 | 187 |
| MS.gene68603.t1 | AT3G54660 | 27.400 | 500 | 323 | 11 | 9 | 486 | 53 | 534 | 4.14e-43 | 161 |
| MS.gene68603.t1 | AT3G17240 | 73.196 | 97 | 19 | 3 | 1 | 91 | 1 | 96 | 3.19e-32 | 120 |
Find 157 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCACTTCTGGACTTAATT+TGG | 0.142487 | 8.1:+7873541 | MS.gene68603:CDS |
| CCCAAGAAGCTTGTAGTTAT+TGG | 0.185023 | 8.1:+7873233 | MS.gene68603:CDS |
| CCCAATAACTACAAGCTTCT+TGG | 0.257682 | 8.1:-7873234 | None:intergenic |
| GTGGTTGGAGTTGATACTTC+TGG | 0.261463 | 8.1:+7873425 | MS.gene68603:CDS |
| CCAAGAAGCTTGTAGTTATT+GGG | 0.265755 | 8.1:+7873234 | MS.gene68603:CDS |
| TGACAAGGTAGGACGCATTT+TGG | 0.289967 | 8.1:+7873583 | MS.gene68603:CDS |
| ACCAAGCTGAGCAGCTTTAA+TGG | 0.289980 | 8.1:-7871645 | None:intergenic |
| GGTAGGACTCCATTCACTTC+TGG | 0.310454 | 8.1:+7873530 | MS.gene68603:CDS |
| ATCGCAGATTGTTCCATCTA+TGG | 0.318072 | 8.1:+7873331 | MS.gene68603:CDS |
| GACAACATCTGCTTCAATTA+TGG | 0.320224 | 8.1:-7873495 | None:intergenic |
| AAGAAAATTGTATCATCAAC+AGG | 0.323435 | 8.1:+7873188 | MS.gene68603:CDS |
| AGGTCAAGAGGTTTCGCTTC+CGG | 0.337458 | 8.1:+7871566 | MS.gene68603:CDS |
| CGGATTTCTCCATCCATAGA+TGG | 0.346076 | 8.1:-7873344 | None:intergenic |
| AAGGAGACAGACAAAATATT+GGG | 0.348798 | 8.1:+7873923 | MS.gene68603:CDS |
| TGTTGGGAAGTTCCCTTTCA+TGG | 0.353483 | 8.1:+7873841 | MS.gene68603:CDS |
| GAGGAGCAGGTTAAGGAAAC+TGG | 0.355744 | 8.1:+7873806 | MS.gene68603:CDS |
| CAGGCTCTTCAAATGTGAAT+TGG | 0.356810 | 8.1:-7874103 | None:intergenic |
| AAAGGAGACAGACAAAATAT+TGG | 0.357543 | 8.1:+7873922 | MS.gene68603:CDS |
| AATTGCCTTCGCCCTGCTAT+TGG | 0.359778 | 8.1:-7873864 | None:intergenic |
| CCAATAACTACAAGCTTCTT+GGG | 0.362478 | 8.1:-7873233 | None:intergenic |
| TTAACAGCCTCACTCATTGT+TGG | 0.377486 | 8.1:-7874052 | None:intergenic |
| GCAATTGGTGATGTAATTCC+CGG | 0.389033 | 8.1:+7873644 | MS.gene68603:CDS |
| ATGAATGAGTTCTCCTGCAT+TGG | 0.396625 | 8.1:-7873963 | None:intergenic |
| GGCTAGAGATGGGCTCTGTA+TGG | 0.404513 | 8.1:+7873270 | MS.gene68603:CDS |
| TCCCTTTCATGGCCAATAGC+AGG | 0.405072 | 8.1:+7873852 | MS.gene68603:CDS |
| TGTCAAGATAATTGCTGAAA+AGG | 0.408222 | 8.1:+7873904 | MS.gene68603:CDS |
| GGCTCTGTATGGGGACGAAT+TGG | 0.414655 | 8.1:+7873281 | MS.gene68603:CDS |
| TGGTTGGAGTTGATACTTCT+GGG | 0.417457 | 8.1:+7873426 | MS.gene68603:CDS |
| TCCGTTACACTTTCTCTCTA+AGG | 0.422319 | 8.1:+7871546 | MS.gene68603:CDS |
| GGACTTAATTTGGACAAGAT+AGG | 0.423938 | 8.1:+7873551 | MS.gene68603:CDS |
| GAAGACAGAGGAGCAGGTTA+AGG | 0.424716 | 8.1:+7873799 | MS.gene68603:CDS |
| GCTAGAGATGGGCTCTGTAT+GGG | 0.427257 | 8.1:+7873271 | MS.gene68603:CDS |
| GTCATCATCGGTGGTGGTCC+CGG | 0.435774 | 8.1:+7871608 | MS.gene68603:CDS |
| TGTTGAGTACTTAGCTGGTA+AGG | 0.436084 | 8.1:+7873709 | MS.gene68603:CDS |
| GCCATTAAAGCTGCTCAGCT+TGG | 0.436823 | 8.1:+7871644 | MS.gene68603:CDS |
| GTTATTGGGGCAGGTTACAT+TGG | 0.436835 | 8.1:+7873248 | MS.gene68603:CDS |
| CTGGAGTTCAATACCGTGTT+GGG | 0.438229 | 8.1:+7873825 | MS.gene68603:CDS |
| AACGATGGCTATGGCGAACT+TGG | 0.445916 | 8.1:+7871481 | None:intergenic |
| GAGAACGCTGAAACTGCTTC+CGG | 0.449447 | 8.1:-7873364 | None:intergenic |
| AACATTCATTTGCCAACCAT+GGG | 0.450908 | 8.1:+7872904 | MS.gene68603:CDS |
| AATCGAAATGGAACCTTGGA+AGG | 0.456741 | 8.1:-7871734 | None:intergenic |
| GTCTGTTCACCACCAGCTGC+TGG | 0.459349 | 8.1:-7873473 | None:intergenic |
| AATCTGACCCGGGGTATTGA+AGG | 0.459866 | 8.1:+7872993 | MS.gene68603:CDS |
| TCTGCCTTGTGTGCCAACAT+TGG | 0.464020 | 8.1:-7873668 | None:intergenic |
| AGTACTTAGCTGGTAAGGTT+GGG | 0.465511 | 8.1:+7873714 | MS.gene68603:CDS |
| GCTTGTGTTGAGTACTTAGC+TGG | 0.469925 | 8.1:+7873704 | MS.gene68603:CDS |
| TTATTGGGGCAGGTTACATT+GGG | 0.471150 | 8.1:+7873249 | MS.gene68603:CDS |
| CGTTGGTTGCATCCCTTCCA+AGG | 0.471575 | 8.1:+7871721 | MS.gene68603:CDS |
| CATATTATGGCACCCAATGC+AGG | 0.471769 | 8.1:+7873950 | MS.gene68603:CDS |
| TTCCCTACAGAAGCAACCTC+GGG | 0.473270 | 8.1:-7873779 | None:intergenic |
| GGAGTTGATACTTCTGGGGA+TGG | 0.475245 | 8.1:+7873431 | MS.gene68603:CDS |
| CAAATGAATGTTTAGCCTCA+TGG | 0.478496 | 8.1:-7872893 | None:intergenic |
| TGAATGAGTTCTCCTGCATT+GGG | 0.481793 | 8.1:-7873962 | None:intergenic |
| AGGTTACATTGGGCTAGAGA+TGG | 0.486720 | 8.1:+7873259 | MS.gene68603:CDS |
| GAGTACTTAGCTGGTAAGGT+TGG | 0.487434 | 8.1:+7873713 | MS.gene68603:CDS |
| CGGTCCAATGTTGGCACACA+AGG | 0.493606 | 8.1:+7873664 | MS.gene68603:CDS |
| GTCTCGGGTGTCTATGCAAT+TGG | 0.495457 | 8.1:+7873629 | MS.gene68603:CDS |
| GGCGAACTTGGCTCGTAGGA+AGG | 0.497240 | 8.1:+7871493 | MS.gene68603:CDS |
| CCCTGCTATTGGCCATGAAA+GGG | 0.502849 | 8.1:-7873853 | None:intergenic |
| ATCGAAAAGCGTGGTGCTCT+TGG | 0.503316 | 8.1:+7871683 | MS.gene68603:CDS |
| ATAGACACCCGAGACATTTG+TGG | 0.506046 | 8.1:-7873621 | None:intergenic |
| ACCCCGAGGTTGCTTCTGTA+GGG | 0.507942 | 8.1:+7873777 | MS.gene68603:CDS |
| TGTAGGGAAGACAGAGGAGC+AGG | 0.508653 | 8.1:+7873793 | MS.gene68603:CDS |
| GGGTTCCGCTCTTCTTTCAT+CGG | 0.511274 | 8.1:+7871514 | MS.gene68603:CDS |
| GATGTTGTCCTTGTATCTGC+TGG | 0.512028 | 8.1:+7873509 | MS.gene68603:CDS |
| GCCCTGCTATTGGCCATGAA+AGG | 0.515476 | 8.1:-7873854 | None:intergenic |
| GAAAACGACGTCGTCATCAT+CGG | 0.520382 | 8.1:+7871596 | MS.gene68603:CDS |
| CTAGAGATGGGCTCTGTATG+GGG | 0.523383 | 8.1:+7873272 | MS.gene68603:CDS |
| GTAACATATGTCAAAGGATA+CGG | 0.525267 | 8.1:+7873035 | MS.gene68603:CDS |
| CAGCGTTCTCTTGAAAAGCA+AGG | 0.526866 | 8.1:+7873377 | MS.gene68603:CDS |
| CATCTATGGATGGAGAAATC+CGG | 0.528587 | 8.1:+7873345 | MS.gene68603:CDS |
| GCACACAAGGCAGAAGAAGA+TGG | 0.528923 | 8.1:+7873677 | MS.gene68603:CDS |
| CCCTTTCATGGCCAATAGCA+GGG | 0.531192 | 8.1:+7873853 | MS.gene68603:CDS |
| CATTTGAAACTTTGACCCCA+TGG | 0.533125 | 8.1:-7872920 | None:intergenic |
| GAAAAGCGTGGTGCTCTTGG+TGG | 0.534842 | 8.1:+7871686 | MS.gene68603:CDS |
| TGAAACTTTGACCCCATGGT+TGG | 0.535838 | 8.1:-7872916 | None:intergenic |
| AGCTGGTAAGGTTGGGCATG+TGG | 0.543166 | 8.1:+7873721 | MS.gene68603:CDS |
| AAGCTTGTAGTTATTGGGGC+AGG | 0.545180 | 8.1:+7873239 | MS.gene68603:CDS |
| CTTCCCTACAGAAGCAACCT+CGG | 0.546875 | 8.1:-7873780 | None:intergenic |
| GGTTACATTGGGCTAGAGAT+GGG | 0.547643 | 8.1:+7873260 | MS.gene68603:CDS |
| AAAATTCCTTTCACCATCTG+AGG | 0.547911 | 8.1:+7873058 | MS.gene68603:CDS |
| AAACATTCATTTGCCAACCA+TGG | 0.549901 | 8.1:+7872903 | MS.gene68603:CDS |
| CTAACTGTTGAACCAGCAGC+TGG | 0.550199 | 8.1:+7873461 | MS.gene68603:CDS |
| AATGGCGGCGACGTAACCGC+CGG | 0.551240 | 8.1:-7871627 | None:intergenic |
| GATGCAACCAACGTTGAGAC+AGG | 0.551664 | 8.1:-7871711 | None:intergenic |
| AAGCTGTTTCTAATCTGACC+CGG | 0.552292 | 8.1:+7872982 | MS.gene68603:CDS |
| CTATGGCGAACTTGGCTCGT+AGG | 0.555334 | 8.1:+7871489 | MS.gene68603:CDS |
| GAGTCCTACCAGCAGATACA+AGG | 0.558562 | 8.1:-7873517 | None:intergenic |
| GTCTCTGTAGACACCGTTGA+AGG | 0.558670 | 8.1:+7873080 | MS.gene68603:CDS |
| AAGCTGAATACCAAGGTGGT+TGG | 0.558857 | 8.1:+7873410 | MS.gene68603:CDS |
| GCGAACTTGGCTCGTAGGAA+GGG | 0.560636 | 8.1:+7871494 | MS.gene68603:CDS |
| TTGTCCTTGTATCTGCTGGT+AGG | 0.563808 | 8.1:+7873513 | MS.gene68603:CDS |
| GATTGACTTAGCTGCCATGA+TGG | 0.564118 | 8.1:+7872947 | MS.gene68603:CDS |
| ATGGCGGCGACGTAACCGCC+GGG | 0.564412 | 8.1:-7871626 | None:intergenic |
| AACCCCGAGGTTGCTTCTGT+AGG | 0.567406 | 8.1:+7873776 | MS.gene68603:CDS |
| AAGAATCTTAACGATGGCTA+TGG | 0.567804 | 8.1:+7871472 | None:intergenic |
| AAATTAAGTCCAGAAGTGAA+TGG | 0.568714 | 8.1:-7873539 | None:intergenic |
| AAATAGGCCTTCAATACCCC+GGG | 0.569237 | 8.1:-7873000 | None:intergenic |
| TGTAATTCCCGGTCCAATGT+TGG | 0.569254 | 8.1:+7873655 | MS.gene68603:CDS |
| ACTTTCTCTCTAAGGTCAAG+AGG | 0.569811 | 8.1:+7871554 | MS.gene68603:CDS |
| GTTTAGCCTCATGGTACATG+TGG | 0.570391 | 8.1:-7872884 | None:intergenic |
| CAAGAAGCTTGTAGTTATTG+GGG | 0.570780 | 8.1:+7873235 | MS.gene68603:CDS |
| AGCTGTTTCTAATCTGACCC+GGG | 0.571089 | 8.1:+7872983 | MS.gene68603:CDS |
| TGTGGACTATGACAAAGTAC+CGG | 0.573601 | 8.1:+7873739 | MS.gene68603:CDS |
| TAAATAGGCCTTCAATACCC+CGG | 0.573925 | 8.1:-7873001 | None:intergenic |
| GGCTGTTAAAGAAGCCGCAA+TGG | 0.578312 | 8.1:+7874066 | MS.gene68603:CDS |
| GACGTCGTCATCATCGGTGG+TGG | 0.579886 | 8.1:+7871602 | MS.gene68603:CDS |
| CAGAGACCTCAGATGGTGAA+AGG | 0.580741 | 8.1:-7873064 | None:intergenic |
| CTTGTGTGCCAACATTGGAC+CGG | 0.581579 | 8.1:-7873663 | None:intergenic |
| CAGATTGTTCCATCTATGGA+TGG | 0.587721 | 8.1:+7873335 | MS.gene68603:CDS |
| ACTGGAGTTCAATACCGTGT+TGG | 0.590339 | 8.1:+7873824 | MS.gene68603:CDS |
| AACAAGGTAACATATGTCAA+AGG | 0.591345 | 8.1:+7873029 | MS.gene68603:CDS |
| AAGCATATCATTATAGCCAC+CGG | 0.595212 | 8.1:+7873125 | MS.gene68603:CDS |
| TTCCGCTCTTCTTTCATCGG+CGG | 0.602872 | 8.1:+7871517 | MS.gene68603:CDS |
| GTGAATTGGCTTGTCATAAG+TGG | 0.602908 | 8.1:-7874089 | None:intergenic |
| GGTGAAAATACTGTTGTGAA+AGG | 0.605474 | 8.1:+7873101 | MS.gene68603:CDS |
| CATGGCCAATAGCAGGGCGA+AGG | 0.605899 | 8.1:+7873859 | MS.gene68603:CDS |
| GGTTGGAGTTGATACTTCTG+GGG | 0.615833 | 8.1:+7873427 | MS.gene68603:CDS |
| CAATAACTACAAGCTTCTTG+GGG | 0.618034 | 8.1:-7873232 | None:intergenic |
| GGTGGTACCTGTCTCAACGT+TGG | 0.621896 | 8.1:+7871704 | MS.gene68603:CDS |
| AGTATCAACTCCAACCACCT+TGG | 0.623456 | 8.1:-7873420 | None:intergenic |
| ATGGGGACGAATTGGCTCTG+AGG | 0.627284 | 8.1:+7873289 | MS.gene68603:CDS |
| GTGGACTATGACAAAGTACC+GGG | 0.627905 | 8.1:+7873740 | MS.gene68603:CDS |
| ACCTTAGAGAGAAAGTGTAA+CGG | 0.630266 | 8.1:-7871547 | None:intergenic |
| AAGGCAATTGATAACGCTGA+AGG | 0.632613 | 8.1:+7873878 | MS.gene68603:CDS |
| TTGTGTGCCAACATTGGACC+GGG | 0.636415 | 8.1:-7873662 | None:intergenic |
| GGAGTTGAAACTGACAAGGT+AGG | 0.637183 | 8.1:+7873572 | MS.gene68603:CDS |
| TGGGGTCAAAGTTTCAAATG+TGG | 0.638191 | 8.1:+7872923 | MS.gene68603:CDS |
| TCAGATGTAAAATCTCTACC+TGG | 0.641837 | 8.1:+7873149 | MS.gene68603:CDS |
| AGGAGACAGACAAAATATTG+GGG | 0.643071 | 8.1:+7873924 | MS.gene68603:CDS |
| AGAAAATTGTATCATCAACA+GGG | 0.647191 | 8.1:+7873189 | MS.gene68603:CDS |
| GTGTCTACAGAGACCTCAGA+TGG | 0.651528 | 8.1:-7873071 | None:intergenic |
| AACGACGTCGTCATCATCGG+TGG | 0.658246 | 8.1:+7871599 | MS.gene68603:CDS |
| TGCACATCCAACAATGAGTG+AGG | 0.658611 | 8.1:+7874045 | MS.gene68603:CDS |
| TTTAGCCTCATGGTACATGT+GGG | 0.660235 | 8.1:-7872883 | None:intergenic |
| GCAGTATGATGCATCAAGTG+AGG | 0.668547 | 8.1:+7874003 | MS.gene68603:CDS |
| GCTGTTTCTAATCTGACCCG+GGG | 0.668806 | 8.1:+7872984 | MS.gene68603:CDS |
| TGAAAGGGAACTTCCCAACA+CGG | 0.669482 | 8.1:-7873838 | None:intergenic |
| GGGTTTGTATAGACAACACC+CGG | 0.670467 | 8.1:-7873758 | None:intergenic |
| ATCGAAATGGAACCTTGGAA+GGG | 0.671194 | 8.1:-7871733 | None:intergenic |
| ACCACTTGCATCGAAAAGCG+TGG | 0.672031 | 8.1:+7871674 | MS.gene68603:CDS |
| CTCCGCCGATGAAAGAAGAG+CGG | 0.675152 | 8.1:-7871519 | None:intergenic |
| GAAATTCAAGCTGAATACCA+AGG | 0.679504 | 8.1:+7873403 | MS.gene68603:CDS |
| GAAAATTGTATCATCAACAG+GGG | 0.680955 | 8.1:+7873190 | MS.gene68603:CDS |
| CTTGTCATAAGTGGCCATTG+CGG | 0.687064 | 8.1:-7874080 | None:intergenic |
| TGCATCATACTGCAATGCAA+TGG | 0.690908 | 8.1:-7873993 | None:intergenic |
| TCCCTACAGAAGCAACCTCG+GGG | 0.694823 | 8.1:-7873778 | None:intergenic |
| AAGCTGAGCAGCTTTAATGG+CGG | 0.697561 | 8.1:-7871642 | None:intergenic |
| ACTGTTGAACCAGCAGCTGG+TGG | 0.697745 | 8.1:+7873464 | MS.gene68603:CDS |
| ACATTCATTTGCCAACCATG+GGG | 0.697828 | 8.1:+7872905 | MS.gene68603:CDS |
| GATAGGAGTTGAAACTGACA+AGG | 0.698372 | 8.1:+7873568 | MS.gene68603:CDS |
| ATCATCGGTGGTGGTCCCGG+CGG | 0.698397 | 8.1:+7871611 | MS.gene68603:CDS |
| TGCTTCTGTAGGGAAGACAG+AGG | 0.698830 | 8.1:+7873787 | MS.gene68603:CDS |
| TTCTTCCCACATGTACCATG+AGG | 0.705759 | 8.1:+7872878 | MS.gene68603:CDS |
| GGAGACAGACAAAATATTGG+GGG | 0.714541 | 8.1:+7873925 | MS.gene68603:CDS |
| ATTCAAGCTGAATACCAAGG+TGG | 0.721568 | 8.1:+7873406 | MS.gene68603:CDS |
| TGTTGTCTATACAAACCCCG+AGG | 0.774648 | 8.1:+7873763 | MS.gene68603:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACTATTAAAATAATACA+TGG | - | chr8.1:7872819-7872838 | None:intergenic | 10.0% |
| !! | TTACTATTAAAATAATACAT+GGG | - | chr8.1:7872818-7872837 | None:intergenic | 10.0% |
| !! | AAATTGTATGTTAAATGATA+TGG | + | chr8.1:7872695-7872714 | MS.gene68603:intron | 15.0% |
| !! | AGCATATTATATTAAATCAT+TGG | + | chr8.1:7872625-7872644 | MS.gene68603:intron | 15.0% |
| !! | ATATCATTTAACATACAATT+TGG | - | chr8.1:7872696-7872715 | None:intergenic | 15.0% |
| !! | CTAAAACAAAAGATAAAATA+AGG | + | chr8.1:7872120-7872139 | MS.gene68603:intron | 15.0% |
| !! | TACTATTAAAATAATACATG+GGG | - | chr8.1:7872817-7872836 | None:intergenic | 15.0% |
| !!! | TTTTTAATTGATTAAGTTCA+AGG | + | chr8.1:7871844-7871863 | MS.gene68603:intron | 15.0% |
| !!! | TTTTTGTTATTTTCGATTTT+TGG | + | chr8.1:7871875-7871894 | MS.gene68603:intron | 15.0% |
| !! | AATTAAAAAATACTTGACAC+AGG | - | chr8.1:7872522-7872541 | None:intergenic | 20.0% |
| !! | CTATATGAGAAAAAATGAAT+AGG | - | chr8.1:7871776-7871795 | None:intergenic | 20.0% |
| !!! | TTACCTTGTTTTTCTTAAAT+AGG | - | chr8.1:7873019-7873038 | None:intergenic | 20.0% |
| ! | AAGAAAATTGTATCATCAAC+AGG | + | chr8.1:7873188-7873207 | MS.gene68603:CDS | 25.0% |
| ! | ACATTCAATTCGTTAATCAA+CGG | - | chr8.1:7872595-7872614 | None:intergenic | 25.0% |
| ! | AGAAAATTGTATCATCAACA+GGG | + | chr8.1:7873189-7873208 | MS.gene68603:CDS | 25.0% |
| ! | AGAGAGTAAACATATTGTTA+TGG | + | chr8.1:7872568-7872587 | MS.gene68603:intron | 25.0% |
| ! | ATTATTAGATTTAGCTGGAT+GGG | + | chr8.1:7872350-7872369 | MS.gene68603:intron | 25.0% |
| ! | TTCTCATATAGATATAGATG+TGG | + | chr8.1:7871785-7871804 | MS.gene68603:intron | 25.0% |
| !! | TGTTTATATTTCTGTGTCTT+TGG | + | chr8.1:7871959-7871978 | MS.gene68603:intron | 25.0% |
| AAAGGAGACAGACAAAATAT+TGG | + | chr8.1:7873922-7873941 | MS.gene68603:CDS | 30.0% | |
| AAATTAAGTCCAGAAGTGAA+TGG | - | chr8.1:7873542-7873561 | None:intergenic | 30.0% | |
| AACAAGGTAACATATGTCAA+AGG | + | chr8.1:7873029-7873048 | MS.gene68603:CDS | 30.0% | |
| AAGGAGACAGACAAAATATT+GGG | + | chr8.1:7873923-7873942 | MS.gene68603:CDS | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | + | chr8.1:7872205-7872224 | MS.gene68603:intron | 30.0% | |
| AGGCCTATTTAAGAAAAACA+AGG | + | chr8.1:7873013-7873032 | MS.gene68603:CDS | 30.0% | |
| AGTAGAAAAGTGAATCGAAA+TGG | - | chr8.1:7871749-7871768 | None:intergenic | 30.0% | |
| ATGAATAGCGCTTATGTATA+AGG | + | chr8.1:7872092-7872111 | MS.gene68603:intron | 30.0% | |
| ATGTTTACTCTCTAACATCT+GGG | - | chr8.1:7872561-7872580 | None:intergenic | 30.0% | |
| ATTAAGCTGTTTATCCAAAC+AGG | - | chr8.1:7872055-7872074 | None:intergenic | 30.0% | |
| ATTCACTTCTGGACTTAATT+TGG | + | chr8.1:7873541-7873560 | MS.gene68603:CDS | 30.0% | |
| CTAAACTTGTATTAACCTCT+TGG | + | chr8.1:7872493-7872512 | MS.gene68603:intron | 30.0% | |
| GAAAATTGTATCATCAACAG+GGG | + | chr8.1:7873190-7873209 | MS.gene68603:CDS | 30.0% | |
| GATTATTAGATTTAGCTGGA+TGG | + | chr8.1:7872349-7872368 | MS.gene68603:intron | 30.0% | |
| GTAACATATGTCAAAGGATA+CGG | + | chr8.1:7873035-7873054 | MS.gene68603:CDS | 30.0% | |
| GTATGTTAAATGATATGGTC+TGG | + | chr8.1:7872700-7872719 | MS.gene68603:intron | 30.0% | |
| TATGTTTACTCTCTAACATC+TGG | - | chr8.1:7872562-7872581 | None:intergenic | 30.0% | |
| TCCAGCTAAATCTAATAATC+CGG | - | chr8.1:7872349-7872368 | None:intergenic | 30.0% | |
| TGTCAAGATAATTGCTGAAA+AGG | + | chr8.1:7873904-7873923 | MS.gene68603:CDS | 30.0% | |
| TTAAGCTGTTTATCCAAACA+GGG | - | chr8.1:7872054-7872073 | None:intergenic | 30.0% | |
| ! | AACAGTATTTTCACCTTCAA+CGG | - | chr8.1:7873096-7873115 | None:intergenic | 30.0% |
| ! | ACTCTTGATTTTCTCACTTT+AGG | + | chr8.1:7872666-7872685 | MS.gene68603:intron | 30.0% |
| ! | CTCTTGATTTTCTCACTTTA+GGG | + | chr8.1:7872667-7872686 | MS.gene68603:intron | 30.0% |
| ! | TAAATGATATGGTCTGGAAT+TGG | + | chr8.1:7872706-7872725 | MS.gene68603:intron | 30.0% |
| ! | TAACTTTTCGTAGAGTCATT+TGG | + | chr8.1:7872429-7872448 | MS.gene68603:intron | 30.0% |
| ! | TAGAGATTTTACATCTGAAC+CGG | - | chr8.1:7873147-7873166 | None:intergenic | 30.0% |
| ! | TCTTGATTTTCTCACTTTAG+GGG | + | chr8.1:7872668-7872687 | MS.gene68603:intron | 30.0% |
| !! | CTTTGATTTTGGATGAACAT+CGG | + | chr8.1:7871935-7871954 | MS.gene68603:intron | 30.0% |
| !!! | CTCTTTTTTAAAGTCTACTC+TGG | + | chr8.1:7872463-7872482 | MS.gene68603:intron | 30.0% |
| AAAACCATATTCCACTAGGT+GGG | - | chr8.1:7872774-7872793 | None:intergenic | 35.0% | |
| AAAATTCCTTTCACCATCTG+AGG | + | chr8.1:7873058-7873077 | MS.gene68603:CDS | 35.0% | |
| AAACATTCATTTGCCAACCA+TGG | + | chr8.1:7872903-7872922 | MS.gene68603:CDS | 35.0% | |
| AACATTCATTTGCCAACCAT+GGG | + | chr8.1:7872904-7872923 | MS.gene68603:CDS | 35.0% | |
| AACCAAAACCATATTCCACT+AGG | - | chr8.1:7872778-7872797 | None:intergenic | 35.0% | |
| AAGCATATCATTATAGCCAC+CGG | + | chr8.1:7873125-7873144 | MS.gene68603:CDS | 35.0% | |
| ACCGGATTATTAGATTTAGC+TGG | + | chr8.1:7872345-7872364 | MS.gene68603:intron | 35.0% | |
| AGGAGACAGACAAAATATTG+GGG | + | chr8.1:7873924-7873943 | MS.gene68603:CDS | 35.0% | |
| CAAATGAATGTTTAGCCTCA+TGG | - | chr8.1:7872896-7872915 | None:intergenic | 35.0% | |
| CAAGAAGCTTGTAGTTATTG+GGG | + | chr8.1:7873235-7873254 | MS.gene68603:CDS | 35.0% | |
| CAATAACTACAAGCTTCTTG+GGG | - | chr8.1:7873235-7873254 | None:intergenic | 35.0% | |
| CCAAGAAGCTTGTAGTTATT+GGG | + | chr8.1:7873234-7873253 | MS.gene68603:CDS | 35.0% | |
| CCAATAACTACAAGCTTCTT+GGG | - | chr8.1:7873236-7873255 | None:intergenic | 35.0% | |
| GAAATTCAAGCTGAATACCA+AGG | + | chr8.1:7873403-7873422 | MS.gene68603:CDS | 35.0% | |
| GACAACATCTGCTTCAATTA+TGG | - | chr8.1:7873498-7873517 | None:intergenic | 35.0% | |
| GGTGAAAATACTGTTGTGAA+AGG | + | chr8.1:7873101-7873120 | MS.gene68603:CDS | 35.0% | |
| TCAGATGTAAAATCTCTACC+TGG | + | chr8.1:7873149-7873168 | MS.gene68603:CDS | 35.0% | |
| TCTTGATTTAATGCCCTGTT+TGG | + | chr8.1:7872038-7872057 | MS.gene68603:intron | 35.0% | |
| TTGTGTTGCCTTCATATTTC+AGG | + | chr8.1:7872845-7872864 | MS.gene68603:intron | 35.0% | |
| ! | AAGGTTTTCCACAAATGTCT+CGG | + | chr8.1:7873613-7873632 | MS.gene68603:CDS | 35.0% |
| ! | AATATTGGGGGTGCATATTA+TGG | + | chr8.1:7873937-7873956 | MS.gene68603:CDS | 35.0% |
| ! | ACCTTAGAGAGAAAGTGTAA+CGG | - | chr8.1:7871550-7871569 | None:intergenic | 35.0% |
| ! | GGACTTAATTTGGACAAGAT+AGG | + | chr8.1:7873551-7873570 | MS.gene68603:CDS | 35.0% |
| !! | GACGCATTTTGGTAAATGAA+AGG | + | chr8.1:7873594-7873613 | MS.gene68603:CDS | 35.0% |
| !!! | CAAGTTAGTTTTTTCTGCTG+AGG | + | chr8.1:7871903-7871922 | MS.gene68603:intron | 35.0% |
| AAAACACTTGCGAGACTGTT+TGG | - | chr8.1:7872261-7872280 | None:intergenic | 40.0% | |
| AAACACTTGCGAGACTGTTT+GGG | - | chr8.1:7872260-7872279 | None:intergenic | 40.0% | |
| AAACCATATTCCACTAGGTG+GGG | - | chr8.1:7872773-7872792 | None:intergenic | 40.0% | |
| AAGCTGTCATGGAGAACTTA+TGG | + | chr8.1:7872181-7872200 | MS.gene68603:intron | 40.0% | |
| AATCGAAATGGAACCTTGGA+AGG | - | chr8.1:7871737-7871756 | None:intergenic | 40.0% | |
| ACATTCATTTGCCAACCATG+GGG | + | chr8.1:7872905-7872924 | MS.gene68603:CDS | 40.0% | |
| AGTACTTAGCTGGTAAGGTT+GGG | + | chr8.1:7873714-7873733 | MS.gene68603:CDS | 40.0% | |
| AGTGAATCGAAATGGAACCT+TGG | - | chr8.1:7871741-7871760 | None:intergenic | 40.0% | |
| ATCGAAATGGAACCTTGGAA+GGG | - | chr8.1:7871736-7871755 | None:intergenic | 40.0% | |
| ATCGCAGATTGTTCCATCTA+TGG | + | chr8.1:7873331-7873350 | MS.gene68603:CDS | 40.0% | |
| ATGAATGAGTTCTCCTGCAT+TGG | - | chr8.1:7873966-7873985 | None:intergenic | 40.0% | |
| ATTCAAGCTGAATACCAAGG+TGG | + | chr8.1:7873406-7873425 | MS.gene68603:CDS | 40.0% | |
| CAAAACCATATTCCACTAGG+TGG | - | chr8.1:7872775-7872794 | None:intergenic | 40.0% | |
| CAGATTGTTCCATCTATGGA+TGG | + | chr8.1:7873335-7873354 | MS.gene68603:CDS | 40.0% | |
| CATCTATGGATGGAGAAATC+CGG | + | chr8.1:7873345-7873364 | MS.gene68603:CDS | 40.0% | |
| CCCAAGAAGCTTGTAGTTAT+TGG | + | chr8.1:7873233-7873252 | MS.gene68603:CDS | 40.0% | |
| CCCAATAACTACAAGCTTCT+TGG | - | chr8.1:7873237-7873256 | None:intergenic | 40.0% | |
| GATAGGAGTTGAAACTGACA+AGG | + | chr8.1:7873568-7873587 | MS.gene68603:CDS | 40.0% | |
| GGAGACAGACAAAATATTGG+GGG | + | chr8.1:7873925-7873944 | MS.gene68603:CDS | 40.0% | |
| TAAATAGGCCTTCAATACCC+CGG | - | chr8.1:7873004-7873023 | None:intergenic | 40.0% | |
| TCCGTTACACTTTCTCTCTA+AGG | + | chr8.1:7871546-7871565 | MS.gene68603:CDS | 40.0% | |
| TGAATGAGTTCTCCTGCATT+GGG | - | chr8.1:7873965-7873984 | None:intergenic | 40.0% | |
| TGCATCATACTGCAATGCAA+TGG | - | chr8.1:7873996-7874015 | None:intergenic | 40.0% | |
| TGGGGTCAAAGTTTCAAATG+TGG | + | chr8.1:7872923-7872942 | MS.gene68603:CDS | 40.0% | |
| TGTTGAGTACTTAGCTGGTA+AGG | + | chr8.1:7873709-7873728 | MS.gene68603:CDS | 40.0% | |
| TTAACAGCCTCACTCATTGT+TGG | - | chr8.1:7874055-7874074 | None:intergenic | 40.0% | |
| TTATTGGGGCAGGTTACATT+GGG | + | chr8.1:7873249-7873268 | MS.gene68603:CDS | 40.0% | |
| TTTAGCCTCATGGTACATGT+GGG | - | chr8.1:7872886-7872905 | None:intergenic | 40.0% | |
| ! | AGATTTTACATCTGAACCGG+TGG | - | chr8.1:7873144-7873163 | None:intergenic | 40.0% |
| ! | AGGTTTTCCACAAATGTCTC+GGG | + | chr8.1:7873614-7873633 | MS.gene68603:CDS | 40.0% |
| ! | CACCTAGTGGAATATGGTTT+TGG | + | chr8.1:7872773-7872792 | MS.gene68603:intron | 40.0% |
| ! | CATTTGAAACTTTGACCCCA+TGG | - | chr8.1:7872923-7872942 | None:intergenic | 40.0% |
| ! | TGTGGACTATGACAAAGTAC+CGG | + | chr8.1:7873739-7873758 | MS.gene68603:CDS | 40.0% |
| ! | TTTGTCTTTTTGCGCCATCA+TGG | - | chr8.1:7872964-7872983 | None:intergenic | 40.0% |
| ! | TTTTCATCAATAGTGACGCC+AGG | - | chr8.1:7873170-7873189 | None:intergenic | 40.0% |
| !! | AAGCTGTTTCTAATCTGACC+CGG | + | chr8.1:7872982-7873001 | MS.gene68603:CDS | 40.0% |
| !! | AAGGCAATTGATAACGCTGA+AGG | + | chr8.1:7873878-7873897 | MS.gene68603:CDS | 40.0% |
| !! | ACTTTCTCTCTAAGGTCAAG+AGG | + | chr8.1:7871554-7871573 | MS.gene68603:CDS | 40.0% |
| !! | CAAAAGCGCCTGAAATATGA+AGG | - | chr8.1:7872856-7872875 | None:intergenic | 40.0% |
| !! | GCAATTGGTGATGTAATTCC+CGG | + | chr8.1:7873644-7873663 | MS.gene68603:CDS | 40.0% |
| !! | GCTGTTTTCTTAAGCTGTCA+TGG | + | chr8.1:7872170-7872189 | MS.gene68603:intron | 40.0% |
| !! | GTGAATTGGCTTGTCATAAG+TGG | - | chr8.1:7874092-7874111 | None:intergenic | 40.0% |
| !! | TGGTTGGAGTTGATACTTCT+GGG | + | chr8.1:7873426-7873445 | MS.gene68603:CDS | 40.0% |
| !!! | GGTGGAGAGTACTTTGATTT+TGG | + | chr8.1:7871924-7871943 | MS.gene68603:intron | 40.0% |
| !!! | GTTAGTTTTTTCTGCTGAGG+TGG | + | chr8.1:7871906-7871925 | MS.gene68603:intron | 40.0% |
| AAATAGGCCTTCAATACCCC+GGG | - | chr8.1:7873003-7873022 | None:intergenic | 45.0% | |
| AAGCTGAATACCAAGGTGGT+TGG | + | chr8.1:7873410-7873429 | MS.gene68603:CDS | 45.0% | |
| AAGCTTGTAGTTATTGGGGC+AGG | + | chr8.1:7873239-7873258 | MS.gene68603:CDS | 45.0% | |
| ACTGGAGTTCAATACCGTGT+TGG | + | chr8.1:7873824-7873843 | MS.gene68603:CDS | 45.0% | |
| ACTTGACACAGGAAACCAAG+AGG | - | chr8.1:7872511-7872530 | None:intergenic | 45.0% | |
| AGACAAGCGCTTAGACATGA+AGG | - | chr8.1:7872323-7872342 | None:intergenic | 45.0% | |
| AGTATCAACTCCAACCACCT+TGG | - | chr8.1:7873423-7873442 | None:intergenic | 45.0% | |
| ATAGACACCCGAGACATTTG+TGG | - | chr8.1:7873624-7873643 | None:intergenic | 45.0% | |
| CAGCGTTCTCTTGAAAAGCA+AGG | + | chr8.1:7873377-7873396 | MS.gene68603:CDS | 45.0% | |
| CATATTATGGCACCCAATGC+AGG | + | chr8.1:7873950-7873969 | MS.gene68603:CDS | 45.0% | |
| CGGATTTCTCCATCCATAGA+TGG | - | chr8.1:7873347-7873366 | None:intergenic | 45.0% | |
| CTGGAGTTCAATACCGTGTT+GGG | + | chr8.1:7873825-7873844 | MS.gene68603:CDS | 45.0% | |
| CTTGTCATAAGTGGCCATTG+CGG | - | chr8.1:7874083-7874102 | None:intergenic | 45.0% | |
| GAAAACGACGTCGTCATCAT+CGG | + | chr8.1:7871596-7871615 | MS.gene68603:CDS | 45.0% | |
| GACAAGCGCTTAGACATGAA+GGG | - | chr8.1:7872322-7872341 | None:intergenic | 45.0% | |
| GAGTACTTAGCTGGTAAGGT+TGG | + | chr8.1:7873713-7873732 | MS.gene68603:CDS | 45.0% | |
| GATGTTGTCCTTGTATCTGC+TGG | + | chr8.1:7873509-7873528 | MS.gene68603:CDS | 45.0% | |
| GCAGTATGATGCATCAAGTG+AGG | + | chr8.1:7874003-7874022 | MS.gene68603:CDS | 45.0% | |
| GCTTGTGTTGAGTACTTAGC+TGG | + | chr8.1:7873704-7873723 | MS.gene68603:CDS | 45.0% | |
| GGAGTTGAAACTGACAAGGT+AGG | + | chr8.1:7873572-7873591 | MS.gene68603:CDS | 45.0% | |
| GGGTTTGTATAGACAACACC+CGG | - | chr8.1:7873761-7873780 | None:intergenic | 45.0% | |
| GTCTAAGCGCTTGTCTTAAC+CGG | + | chr8.1:7872327-7872346 | MS.gene68603:intron | 45.0% | |
| GTTATTGGGGCAGGTTACAT+TGG | + | chr8.1:7873248-7873267 | MS.gene68603:CDS | 45.0% | |
| GTTTAGCCTCATGGTACATG+TGG | - | chr8.1:7872887-7872906 | None:intergenic | 45.0% | |
| TGAAACTTTGACCCCATGGT+TGG | - | chr8.1:7872919-7872938 | None:intergenic | 45.0% | |
| TGAAAGGGAACTTCCCAACA+CGG | - | chr8.1:7873841-7873860 | None:intergenic | 45.0% | |
| TGCACATCCAACAATGAGTG+AGG | + | chr8.1:7874045-7874064 | MS.gene68603:CDS | 45.0% | |
| TGTAATTCCCGGTCCAATGT+TGG | + | chr8.1:7873655-7873674 | MS.gene68603:CDS | 45.0% | |
| TGTTGGGAAGTTCCCTTTCA+TGG | + | chr8.1:7873841-7873860 | MS.gene68603:CDS | 45.0% | |
| TGTTGTCTATACAAACCCCG+AGG | + | chr8.1:7873763-7873782 | MS.gene68603:CDS | 45.0% | |
| TTCTTCCCACATGTACCATG+AGG | + | chr8.1:7872878-7872897 | MS.gene68603:CDS | 45.0% | |
| TTGTCCTTGTATCTGCTGGT+AGG | + | chr8.1:7873513-7873532 | MS.gene68603:CDS | 45.0% | |
| ! | AAGCTGAGCAGCTTTAATGG+CGG | - | chr8.1:7871645-7871664 | None:intergenic | 45.0% |
| ! | ACCAAGCTGAGCAGCTTTAA+TGG | - | chr8.1:7871648-7871667 | None:intergenic | 45.0% |
| ! | AGGTTACATTGGGCTAGAGA+TGG | + | chr8.1:7873259-7873278 | MS.gene68603:CDS | 45.0% |
| ! | GATTGACTTAGCTGCCATGA+TGG | + | chr8.1:7872947-7872966 | MS.gene68603:CDS | 45.0% |
| ! | GGTTACATTGGGCTAGAGAT+GGG | + | chr8.1:7873260-7873279 | MS.gene68603:CDS | 45.0% |
| ! | GTGGACTATGACAAAGTACC+GGG | + | chr8.1:7873740-7873759 | MS.gene68603:CDS | 45.0% |
| ! | TGACAAGGTAGGACGCATTT+TGG | + | chr8.1:7873583-7873602 | MS.gene68603:CDS | 45.0% |
| !! | AGCTGTTTCTAATCTGACCC+GGG | + | chr8.1:7872983-7873002 | MS.gene68603:CDS | 45.0% |
| !! | GACGTCGTTTTCATCAGATC+CGG | - | chr8.1:7871588-7871607 | None:intergenic | 45.0% |
| !! | GGTTGGAGTTGATACTTCTG+GGG | + | chr8.1:7873427-7873446 | MS.gene68603:CDS | 45.0% |
| !! | GTGGTTGGAGTTGATACTTC+TGG | + | chr8.1:7873425-7873444 | MS.gene68603:CDS | 45.0% |
| AATTGCCTTCGCCCTGCTAT+TGG | - | chr8.1:7873867-7873886 | None:intergenic | 50.0% | |
| ACCACTTGCATCGAAAAGCG+TGG | + | chr8.1:7871674-7871693 | MS.gene68603:CDS | 50.0% | |
| AGGTCAAGAGGTTTCGCTTC+CGG | + | chr8.1:7871566-7871585 | MS.gene68603:CDS | 50.0% | |
| CACTAGGTGGGGTGACTATA+TGG | - | chr8.1:7872762-7872781 | None:intergenic | 50.0% | |
| CAGAGACCTCAGATGGTGAA+AGG | - | chr8.1:7873067-7873086 | None:intergenic | 50.0% | |
| CATATAGTCACCCCACCTAG+TGG | + | chr8.1:7872760-7872779 | MS.gene68603:intron | 50.0% | |
| CCCTGCTATTGGCCATGAAA+GGG | - | chr8.1:7873856-7873875 | None:intergenic | 50.0% | |
| CCCTTTCATGGCCAATAGCA+GGG | + | chr8.1:7873853-7873872 | MS.gene68603:CDS | 50.0% | |
| CTAACTGTTGAACCAGCAGC+TGG | + | chr8.1:7873461-7873480 | MS.gene68603:CDS | 50.0% | |
| CTTCCCTACAGAAGCAACCT+CGG | - | chr8.1:7873783-7873802 | None:intergenic | 50.0% | |
| CTTGTGTGCCAACATTGGAC+CGG | - | chr8.1:7873666-7873685 | None:intergenic | 50.0% | |
| GAAGACAGAGGAGCAGGTTA+AGG | + | chr8.1:7873799-7873818 | MS.gene68603:CDS | 50.0% | |
| GAGAACGCTGAAACTGCTTC+CGG | - | chr8.1:7873367-7873386 | None:intergenic | 50.0% | |
| GAGGAGCAGGTTAAGGAAAC+TGG | + | chr8.1:7873806-7873825 | MS.gene68603:CDS | 50.0% | |
| GAGTCCTACCAGCAGATACA+AGG | - | chr8.1:7873520-7873539 | None:intergenic | 50.0% | |
| GATGCAACCAACGTTGAGAC+AGG | - | chr8.1:7871714-7871733 | None:intergenic | 50.0% | |
| GCACACAAGGCAGAAGAAGA+TGG | + | chr8.1:7873677-7873696 | MS.gene68603:CDS | 50.0% | |
| GCCATTAAAGCTGCTCAGCT+TGG | + | chr8.1:7871644-7871663 | MS.gene68603:CDS | 50.0% | |
| GGCTGTTAAAGAAGCCGCAA+TGG | + | chr8.1:7874066-7874085 | MS.gene68603:CDS | 50.0% | |
| GGGTTCCGCTCTTCTTTCAT+CGG | + | chr8.1:7871514-7871533 | MS.gene68603:CDS | 50.0% | |
| GGTAGGACTCCATTCACTTC+TGG | + | chr8.1:7873530-7873549 | MS.gene68603:CDS | 50.0% | |
| GTCTCGGGTGTCTATGCAAT+TGG | + | chr8.1:7873629-7873648 | MS.gene68603:CDS | 50.0% | |
| GTCTCTGTAGACACCGTTGA+AGG | + | chr8.1:7873080-7873099 | MS.gene68603:CDS | 50.0% | |
| GTGTCTACAGAGACCTCAGA+TGG | - | chr8.1:7873074-7873093 | None:intergenic | 50.0% | |
| TCACCCCACCTAGTGGAATA+TGG | + | chr8.1:7872767-7872786 | MS.gene68603:intron | 50.0% | |
| TCCCTTTCATGGCCAATAGC+AGG | + | chr8.1:7873852-7873871 | MS.gene68603:CDS | 50.0% | |
| TCTGCCTTGTGTGCCAACAT+TGG | - | chr8.1:7873671-7873690 | None:intergenic | 50.0% | |
| TGCTTCTGTAGGGAAGACAG+AGG | + | chr8.1:7873787-7873806 | MS.gene68603:CDS | 50.0% | |
| TTCCCTACAGAAGCAACCTC+GGG | - | chr8.1:7873782-7873801 | None:intergenic | 50.0% | |
| TTCCGCTCTTCTTTCATCGG+CGG | + | chr8.1:7871517-7871536 | MS.gene68603:CDS | 50.0% | |
| TTGTGTGCCAACATTGGACC+GGG | - | chr8.1:7873665-7873684 | None:intergenic | 50.0% | |
| ! | ACCACGCTTTTCGATGCAAG+TGG | - | chr8.1:7871678-7871697 | None:intergenic | 50.0% |
| ! | ATCGAAAAGCGTGGTGCTCT+TGG | + | chr8.1:7871683-7871702 | MS.gene68603:CDS | 50.0% |
| ! | CTAGAGATGGGCTCTGTATG+GGG | + | chr8.1:7873272-7873291 | MS.gene68603:CDS | 50.0% |
| ! | GCTAGAGATGGGCTCTGTAT+GGG | + | chr8.1:7873271-7873290 | MS.gene68603:CDS | 50.0% |
| !! | AATCTGACCCGGGGTATTGA+AGG | + | chr8.1:7872993-7873012 | MS.gene68603:CDS | 50.0% |
| !! | GCTGTTTCTAATCTGACCCG+GGG | + | chr8.1:7872984-7873003 | MS.gene68603:CDS | 50.0% |
| !! | GGAGTTGATACTTCTGGGGA+TGG | + | chr8.1:7873431-7873450 | MS.gene68603:CDS | 50.0% |
| AACCCCGAGGTTGCTTCTGT+AGG | + | chr8.1:7873776-7873795 | MS.gene68603:CDS | 55.0% | |
| AACGACGTCGTCATCATCGG+TGG | + | chr8.1:7871599-7871618 | MS.gene68603:CDS | 55.0% | |
| ACCCCGAGGTTGCTTCTGTA+GGG | + | chr8.1:7873777-7873796 | MS.gene68603:CDS | 55.0% | |
| ACTGTTGAACCAGCAGCTGG+TGG | + | chr8.1:7873464-7873483 | MS.gene68603:CDS | 55.0% | |
| AGCTGGTAAGGTTGGGCATG+TGG | + | chr8.1:7873721-7873740 | MS.gene68603:CDS | 55.0% | |
| CGGTCCAATGTTGGCACACA+AGG | + | chr8.1:7873664-7873683 | MS.gene68603:CDS | 55.0% | |
| CTCCGCCGATGAAAGAAGAG+CGG | - | chr8.1:7871522-7871541 | None:intergenic | 55.0% | |
| GCCCTGCTATTGGCCATGAA+AGG | - | chr8.1:7873857-7873876 | None:intergenic | 55.0% | |
| GGCTCTGTATGGGGACGAAT+TGG | + | chr8.1:7873281-7873300 | MS.gene68603:CDS | 55.0% | |
| GGTGGTACCTGTCTCAACGT+TGG | + | chr8.1:7871704-7871723 | MS.gene68603:CDS | 55.0% | |
| TCCCTACAGAAGCAACCTCG+GGG | - | chr8.1:7873781-7873800 | None:intergenic | 55.0% | |
| TGTAGGGAAGACAGAGGAGC+AGG | + | chr8.1:7873793-7873812 | MS.gene68603:CDS | 55.0% | |
| ! | CGTTGGTTGCATCCCTTCCA+AGG | + | chr8.1:7871721-7871740 | MS.gene68603:CDS | 55.0% |
| ! | CTATGGCGAACTTGGCTCGT+AGG | + | chr8.1:7871489-7871508 | MS.gene68603:CDS | 55.0% |
| ! | GAAAAGCGTGGTGCTCTTGG+TGG | + | chr8.1:7871686-7871705 | MS.gene68603:CDS | 55.0% |
| ! | GCGAACTTGGCTCGTAGGAA+GGG | + | chr8.1:7871494-7871513 | MS.gene68603:CDS | 55.0% |
| ! | GGCTAGAGATGGGCTCTGTA+TGG | + | chr8.1:7873270-7873289 | MS.gene68603:CDS | 55.0% |
| !! | ATGGGGACGAATTGGCTCTG+AGG | + | chr8.1:7873289-7873308 | MS.gene68603:CDS | 55.0% |
| CATGGCCAATAGCAGGGCGA+AGG | + | chr8.1:7873859-7873878 | MS.gene68603:CDS | 60.0% | |
| GACGTCGTCATCATCGGTGG+TGG | + | chr8.1:7871602-7871621 | MS.gene68603:CDS | 60.0% | |
| GTCTGTTCACCACCAGCTGC+TGG | - | chr8.1:7873476-7873495 | None:intergenic | 60.0% | |
| ! | GGCGAACTTGGCTCGTAGGA+AGG | + | chr8.1:7871493-7871512 | MS.gene68603:CDS | 60.0% |
| ! | GTCATCATCGGTGGTGGTCC+CGG | + | chr8.1:7871608-7871627 | MS.gene68603:CDS | 60.0% |
| AATGGCGGCGACGTAACCGC+CGG | - | chr8.1:7871630-7871649 | None:intergenic | 65.0% | |
| ! | ATCATCGGTGGTGGTCCCGG+CGG | + | chr8.1:7871611-7871630 | MS.gene68603:CDS | 65.0% |
| ATGGCGGCGACGTAACCGCC+GGG | - | chr8.1:7871629-7871648 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 7871485 | 7874117 | 7871485 | ID=MS.gene68603 |
| chr8.1 | mRNA | 7871485 | 7874117 | 7871485 | ID=MS.gene68603.t1;Parent=MS.gene68603 |
| chr8.1 | exon | 7871485 | 7871742 | 7871485 | ID=MS.gene68603.t1.exon1;Parent=MS.gene68603.t1 |
| chr8.1 | CDS | 7871485 | 7871742 | 7871485 | ID=cds.MS.gene68603.t1;Parent=MS.gene68603.t1 |
| chr8.1 | exon | 7872867 | 7874117 | 7872867 | ID=MS.gene68603.t1.exon2;Parent=MS.gene68603.t1 |
| chr8.1 | CDS | 7872867 | 7874117 | 7872867 | ID=cds.MS.gene68603.t1;Parent=MS.gene68603.t1 |
| Gene Sequence |
| Protein sequence |
