Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26810.t1 | XP_013458339.1 | 99.6 | 502 | 2 | 0 | 1 | 502 | 1 | 502 | 2.20E-278 | 967.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26810.t1 | P31023 | 96.4 | 502 | 17 | 1 | 1 | 502 | 1 | 501 | 4.1e-273 | 941.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26810.t1 | A0A072V2R0 | 99.6 | 502 | 2 | 0 | 1 | 502 | 1 | 502 | 1.6e-278 | 967.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057668 | MS.gene26810 | 0.814957 | 1.18E-51 | -1.69E-46 |
| MS.gene061224 | MS.gene26810 | 0.998606 | 2.96E-270 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene26810 | MS.gene65292 | PPI |
| MS.gene26810 | MS.gene67036 | PPI |
| MS.gene058213 | MS.gene26810 | PPI |
| MS.gene74672 | MS.gene26810 | PPI |
| MS.gene26810 | MS.gene061224 | PPI |
| MS.gene26810 | MS.gene65554 | PPI |
| MS.gene011262 | MS.gene26810 | PPI |
| MS.gene030130 | MS.gene26810 | PPI |
| MS.gene26810 | MS.gene53350 | PPI |
| MS.gene042299 | MS.gene26810 | PPI |
| MS.gene26810 | MS.gene00186 | PPI |
| MS.gene052712 | MS.gene26810 | PPI |
| MS.gene68603 | MS.gene26810 | PPI |
| MS.gene26810 | MS.gene56014 | PPI |
| MS.gene26810 | MS.gene019928 | PPI |
| MS.gene26810 | MS.gene07846 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26810.t1 | MTR_4g123070 | 99.602 | 502 | 2 | 0 | 1 | 502 | 1 | 502 | 0.0 | 1015 |
| MS.gene26810.t1 | MTR_2g034580 | 35.892 | 482 | 286 | 11 | 26 | 490 | 72 | 547 | 7.23e-76 | 249 |
| MS.gene26810.t1 | MTR_4g121880 | 35.388 | 503 | 294 | 11 | 5 | 490 | 56 | 544 | 8.07e-76 | 249 |
| MS.gene26810.t1 | MTR_2g034580 | 35.892 | 482 | 286 | 11 | 26 | 490 | 72 | 547 | 1.76e-75 | 249 |
| MS.gene26810.t1 | MTR_6g033515 | 31.263 | 467 | 285 | 10 | 40 | 486 | 26 | 476 | 4.16e-61 | 208 |
| MS.gene26810.t1 | MTR_6g033515 | 30.417 | 480 | 284 | 12 | 40 | 486 | 26 | 488 | 1.61e-56 | 196 |
| MS.gene26810.t1 | MTR_1g070505 | 27.959 | 490 | 320 | 11 | 15 | 486 | 47 | 521 | 8.04e-49 | 176 |
| MS.gene26810.t1 | MTR_0644s0030 | 30.105 | 382 | 256 | 8 | 31 | 409 | 296 | 669 | 1.02e-36 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26810.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene26810.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene26810.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene26810.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene26810.t1 | AT1G48030 | 85.827 | 508 | 65 | 4 | 1 | 502 | 1 | 507 | 0.0 | 874 |
| MS.gene26810.t1 | AT3G17240 | 85.630 | 508 | 66 | 3 | 1 | 502 | 1 | 507 | 0.0 | 872 |
| MS.gene26810.t1 | AT3G17240 | 85.630 | 508 | 66 | 3 | 1 | 502 | 1 | 507 | 0.0 | 872 |
| MS.gene26810.t1 | AT3G16950 | 34.989 | 463 | 257 | 11 | 55 | 490 | 103 | 548 | 6.73e-73 | 241 |
| MS.gene26810.t1 | AT4G16155 | 35.637 | 463 | 253 | 12 | 55 | 490 | 101 | 545 | 6.92e-73 | 241 |
| MS.gene26810.t1 | AT3G16950 | 34.989 | 463 | 257 | 11 | 55 | 490 | 103 | 548 | 2.05e-72 | 241 |
| MS.gene26810.t1 | AT3G24170 | 29.374 | 463 | 299 | 11 | 40 | 486 | 27 | 477 | 5.76e-53 | 187 |
| MS.gene26810.t1 | AT3G24170 | 29.374 | 463 | 299 | 11 | 40 | 486 | 27 | 477 | 5.76e-53 | 187 |
| MS.gene26810.t1 | AT3G24170 | 29.374 | 463 | 299 | 11 | 40 | 486 | 27 | 477 | 5.76e-53 | 187 |
| MS.gene26810.t1 | AT3G54660 | 27.400 | 500 | 323 | 11 | 9 | 486 | 53 | 534 | 4.14e-43 | 161 |
| MS.gene26810.t1 | AT3G17240 | 73.196 | 97 | 19 | 3 | 1 | 91 | 1 | 96 | 3.19e-32 | 120 |
Find 158 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCACTTCTGGACTTAATT+TGG | 0.142487 | 8.2:+10644865 | MS.gene26810:CDS |
| GTGGTTGGAGTTGATACTTC+TGG | 0.261463 | 8.2:+10644749 | MS.gene26810:CDS |
| CCCGATAACTACAAGCTTCT+TGG | 0.267642 | 8.2:-10644558 | None:intergenic |
| TGACAAGGTAGGACGCATTT+TGG | 0.289967 | 8.2:+10644907 | MS.gene26810:CDS |
| ACCAAGCTGAGCAGCTTTAA+TGG | 0.289980 | 8.2:-10642972 | None:intergenic |
| GGTAGGACTCCATTCACTTC+TGG | 0.310454 | 8.2:+10644854 | MS.gene26810:CDS |
| GACAACATCTGCTTCAATTA+TGG | 0.320224 | 8.2:-10644819 | None:intergenic |
| AAGAAAATTGTATCATCAAC+AGG | 0.323435 | 8.2:+10644512 | MS.gene26810:CDS |
| AGGTCAAGAGGTTTCGCTTC+CGG | 0.337458 | 8.2:+10642893 | MS.gene26810:CDS |
| TGTTGGGAAGTTCCCTTTCA+TGG | 0.353483 | 8.2:+10645165 | MS.gene26810:CDS |
| CCCAAGAAGCTTGTAGTTAT+CGG | 0.353692 | 8.2:+10644557 | MS.gene26810:CDS |
| AAAGGAGACGGACAAAATAT+TGG | 0.354741 | 8.2:+10645246 | MS.gene26810:CDS |
| GAGGAGCAGGTTAAGGAAAC+TGG | 0.355744 | 8.2:+10645130 | MS.gene26810:CDS |
| CAGGCTCTTCAAATGTGAAT+TGG | 0.356810 | 8.2:-10645427 | None:intergenic |
| AATTGCCTTCGCCCTGCTAT+TGG | 0.359778 | 8.2:-10645188 | None:intergenic |
| CCGATAACTACAAGCTTCTT+GGG | 0.373836 | 8.2:-10644557 | None:intergenic |
| TTAACAGCCTCACTCATTGT+TGG | 0.377486 | 8.2:-10645376 | None:intergenic |
| AAGGAGACGGACAAAATATT+GGG | 0.381037 | 8.2:+10645247 | MS.gene26810:CDS |
| GCAATTGGTGATGTAATTCC+CGG | 0.389033 | 8.2:+10644968 | MS.gene26810:CDS |
| ATGAATGAGTTCTCCTGCAT+TGG | 0.396625 | 8.2:-10645287 | None:intergenic |
| GGCTAGAGATGGGCTCTGTA+TGG | 0.404513 | 8.2:+10644594 | MS.gene26810:CDS |
| TCCCTTTCATGGCCAATAGC+AGG | 0.405072 | 8.2:+10645176 | MS.gene26810:CDS |
| TGTCAAGATAATTGCTGAAA+AGG | 0.408222 | 8.2:+10645228 | MS.gene26810:CDS |
| CCAAGAAGCTTGTAGTTATC+GGG | 0.414079 | 8.2:+10644558 | MS.gene26810:CDS |
| GGCTCTGTATGGGGACGAAT+TGG | 0.414655 | 8.2:+10644605 | MS.gene26810:CDS |
| TGGTTGGAGTTGATACTTCT+GGG | 0.417457 | 8.2:+10644750 | MS.gene26810:CDS |
| TCCGTTACACTTTCTCTCTA+AGG | 0.422319 | 8.2:+10642873 | MS.gene26810:CDS |
| GGACTTAATTTGGACAAGAT+AGG | 0.423938 | 8.2:+10644875 | MS.gene26810:CDS |
| GAAGACAGAGGAGCAGGTTA+AGG | 0.424716 | 8.2:+10645123 | MS.gene26810:CDS |
| GCTAGAGATGGGCTCTGTAT+GGG | 0.427257 | 8.2:+10644595 | MS.gene26810:CDS |
| GTCATCATCGGTGGTGGTCC+CGG | 0.435774 | 8.2:+10642935 | MS.gene26810:CDS |
| TGTTGAGTACTTAGCTGGTA+AGG | 0.436084 | 8.2:+10645033 | MS.gene26810:CDS |
| GCCATTAAAGCTGCTCAGCT+TGG | 0.436823 | 8.2:+10642971 | MS.gene26810:CDS |
| CTGGAGTTCAATACCGTGTT+GGG | 0.438229 | 8.2:+10645149 | MS.gene26810:CDS |
| AACGATGGCTATGGCGAACT+TGG | 0.445916 | 8.2:+10642808 | None:intergenic |
| GAGAACGCTGAAACTGCTTC+CGG | 0.449447 | 8.2:-10644688 | None:intergenic |
| AACATTCATTTGCCAACCAT+GGG | 0.450908 | 8.2:+10644228 | MS.gene26810:CDS |
| CTTCCGGATTTCTCCATCCA+TGG | 0.451603 | 8.2:-10644672 | None:intergenic |
| AATCGAAATGGAACCTTGGA+AGG | 0.456741 | 8.2:-10643061 | None:intergenic |
| GTCTGTTCACCACCAGCTGC+TGG | 0.459349 | 8.2:-10644797 | None:intergenic |
| AATCTGACCCGGGGTATTGA+AGG | 0.459866 | 8.2:+10644317 | MS.gene26810:CDS |
| TCTGCCTTGTGTGCCAACAT+TGG | 0.464020 | 8.2:-10644992 | None:intergenic |
| AGTACTTAGCTGGTAAGGTT+GGG | 0.465511 | 8.2:+10645038 | MS.gene26810:CDS |
| TTATCGGGGCAGGTTACATT+GGG | 0.466168 | 8.2:+10644573 | MS.gene26810:CDS |
| GCTTGTGTTGAGTACTTAGC+TGG | 0.469925 | 8.2:+10645028 | MS.gene26810:CDS |
| CGTTGGTTGCATCCCTTCCA+AGG | 0.471575 | 8.2:+10643048 | MS.gene26810:CDS |
| CATATTATGGCACCCAATGC+AGG | 0.471769 | 8.2:+10645274 | MS.gene26810:CDS |
| TTCCCTACAGAAGCAACCTC+GGG | 0.473270 | 8.2:-10645103 | None:intergenic |
| GGAGTTGATACTTCTGGGGA+TGG | 0.475245 | 8.2:+10644755 | MS.gene26810:CDS |
| CAAATGAATGTTTAGCCTCA+TGG | 0.478496 | 8.2:-10644217 | None:intergenic |
| TGAATGAGTTCTCCTGCATT+GGG | 0.481793 | 8.2:-10645286 | None:intergenic |
| GTTATCGGGGCAGGTTACAT+TGG | 0.485635 | 8.2:+10644572 | MS.gene26810:CDS |
| AGGTTACATTGGGCTAGAGA+TGG | 0.486720 | 8.2:+10644583 | MS.gene26810:CDS |
| GAGTACTTAGCTGGTAAGGT+TGG | 0.487434 | 8.2:+10645037 | MS.gene26810:CDS |
| CGGTCCAATGTTGGCACACA+AGG | 0.493606 | 8.2:+10644988 | MS.gene26810:CDS |
| GTCTCGGGTGTCTATGCAAT+TGG | 0.495457 | 8.2:+10644953 | MS.gene26810:CDS |
| GGCGAACTTGGCTCGTAGGA+AGG | 0.497240 | 8.2:+10642820 | MS.gene26810:CDS |
| CCCTGCTATTGGCCATGAAA+GGG | 0.502849 | 8.2:-10645177 | None:intergenic |
| ATCGAAAAGCGTGGTGCTCT+TGG | 0.503316 | 8.2:+10643010 | MS.gene26810:CDS |
| ATAGACACCCGAGACATTTG+TGG | 0.506046 | 8.2:-10644945 | None:intergenic |
| ACCCCGAGGTTGCTTCTGTA+GGG | 0.507942 | 8.2:+10645101 | MS.gene26810:CDS |
| TGTAGGGAAGACAGAGGAGC+AGG | 0.508653 | 8.2:+10645117 | MS.gene26810:CDS |
| GGGTTCCGCTCTTCTTTCAT+CGG | 0.511274 | 8.2:+10642841 | MS.gene26810:CDS |
| GATGTTGTCCTTGTATCTGC+TGG | 0.512028 | 8.2:+10644833 | MS.gene26810:CDS |
| GCCCTGCTATTGGCCATGAA+AGG | 0.515476 | 8.2:-10645178 | None:intergenic |
| CGGATTTCTCCATCCATGGA+TGG | 0.518110 | 8.2:-10644668 | None:intergenic |
| GAAAACGACGTCGTCATCAT+CGG | 0.520382 | 8.2:+10642923 | MS.gene26810:CDS |
| CTAGAGATGGGCTCTGTATG+GGG | 0.523383 | 8.2:+10644596 | MS.gene26810:CDS |
| CATCCATGGATGGAGAAATC+CGG | 0.523667 | 8.2:+10644669 | MS.gene26810:CDS |
| GTAACATATGTCAAAGGATA+CGG | 0.525267 | 8.2:+10644359 | MS.gene26810:CDS |
| CAGCGTTCTCTTGAAAAGCA+AGG | 0.526866 | 8.2:+10644701 | MS.gene26810:CDS |
| GCACACAAGGCAGAAGAAGA+TGG | 0.528923 | 8.2:+10645001 | MS.gene26810:CDS |
| CCCTTTCATGGCCAATAGCA+GGG | 0.531192 | 8.2:+10645177 | MS.gene26810:CDS |
| CATTTGAAACTTTGACCCCA+TGG | 0.533125 | 8.2:-10644244 | None:intergenic |
| GAAAAGCGTGGTGCTCTTGG+TGG | 0.534842 | 8.2:+10643013 | MS.gene26810:CDS |
| TGAAACTTTGACCCCATGGT+TGG | 0.535838 | 8.2:-10644240 | None:intergenic |
| AAGCTTGTAGTTATCGGGGC+AGG | 0.538965 | 8.2:+10644563 | MS.gene26810:CDS |
| ATCGCAGATTGTTCCATCCA+TGG | 0.542630 | 8.2:+10644655 | MS.gene26810:CDS |
| AGCTGGTAAGGTTGGGCATG+TGG | 0.543166 | 8.2:+10645045 | MS.gene26810:CDS |
| CTTCCCTACAGAAGCAACCT+CGG | 0.546875 | 8.2:-10645104 | None:intergenic |
| GGTTACATTGGGCTAGAGAT+GGG | 0.547643 | 8.2:+10644584 | MS.gene26810:CDS |
| AAAATTCCTTTCACCATCTG+AGG | 0.547911 | 8.2:+10644382 | MS.gene26810:CDS |
| AAACATTCATTTGCCAACCA+TGG | 0.549901 | 8.2:+10644227 | MS.gene26810:CDS |
| CTAACTGTTGAACCAGCAGC+TGG | 0.550199 | 8.2:+10644785 | MS.gene26810:CDS |
| AATGGCGGCGACGTAACCGC+CGG | 0.551240 | 8.2:-10642954 | None:intergenic |
| GATGCAACCAACGTTGAGAC+AGG | 0.551664 | 8.2:-10643038 | None:intergenic |
| AAGCTGTTTCTAATCTGACC+CGG | 0.552292 | 8.2:+10644306 | MS.gene26810:CDS |
| CTATGGCGAACTTGGCTCGT+AGG | 0.555334 | 8.2:+10642816 | MS.gene26810:CDS |
| GAGTCCTACCAGCAGATACA+AGG | 0.558562 | 8.2:-10644841 | None:intergenic |
| GTCTCTGTAGACACCGTTGA+AGG | 0.558670 | 8.2:+10644404 | MS.gene26810:CDS |
| AAGCTGAATACCAAGGTGGT+TGG | 0.558857 | 8.2:+10644734 | MS.gene26810:CDS |
| GCGAACTTGGCTCGTAGGAA+GGG | 0.560636 | 8.2:+10642821 | MS.gene26810:CDS |
| TTGTCCTTGTATCTGCTGGT+AGG | 0.563808 | 8.2:+10644837 | MS.gene26810:CDS |
| GATTGACTTAGCTGCCATGA+TGG | 0.564118 | 8.2:+10644271 | MS.gene26810:CDS |
| ATGGCGGCGACGTAACCGCC+GGG | 0.564412 | 8.2:-10642953 | None:intergenic |
| AACCCCGAGGTTGCTTCTGT+AGG | 0.567406 | 8.2:+10645100 | MS.gene26810:CDS |
| AAGAATCTTAACGATGGCTA+TGG | 0.567804 | 8.2:+10642799 | None:intergenic |
| AAATTAAGTCCAGAAGTGAA+TGG | 0.568714 | 8.2:-10644863 | None:intergenic |
| AAATAGGCCTTCAATACCCC+GGG | 0.569237 | 8.2:-10644324 | None:intergenic |
| TGTAATTCCCGGTCCAATGT+TGG | 0.569254 | 8.2:+10644979 | MS.gene26810:CDS |
| ACTTTCTCTCTAAGGTCAAG+AGG | 0.569811 | 8.2:+10642881 | MS.gene26810:CDS |
| GTTTAGCCTCATGGTACATG+TGG | 0.570391 | 8.2:-10644208 | None:intergenic |
| AGCTGTTTCTAATCTGACCC+GGG | 0.571089 | 8.2:+10644307 | MS.gene26810:CDS |
| TAAATAGGCCTTCAATACCC+CGG | 0.573925 | 8.2:-10644325 | None:intergenic |
| CAGATTGTTCCATCCATGGA+TGG | 0.574676 | 8.2:+10644659 | MS.gene26810:CDS |
| GGCTGTTAAAGAAGCCGCAA+TGG | 0.578312 | 8.2:+10645390 | MS.gene26810:CDS |
| GACGTCGTCATCATCGGTGG+TGG | 0.579886 | 8.2:+10642929 | MS.gene26810:CDS |
| CAGAGACCTCAGATGGTGAA+AGG | 0.580741 | 8.2:-10644388 | None:intergenic |
| CTTGTGTGCCAACATTGGAC+CGG | 0.581579 | 8.2:-10644987 | None:intergenic |
| ACTGGAGTTCAATACCGTGT+TGG | 0.590339 | 8.2:+10645148 | MS.gene26810:CDS |
| AACAAGGTAACATATGTCAA+AGG | 0.591345 | 8.2:+10644353 | MS.gene26810:CDS |
| AAGCATATCATTATAGCCAC+CGG | 0.595212 | 8.2:+10644449 | MS.gene26810:CDS |
| TTCCGCTCTTCTTTCATCGG+CGG | 0.602872 | 8.2:+10642844 | MS.gene26810:CDS |
| GTGAATTGGCTTGTCATAAG+TGG | 0.602908 | 8.2:-10645413 | None:intergenic |
| GTGGACTATGACAAAGTACC+AGG | 0.603832 | 8.2:+10645064 | MS.gene26810:CDS |
| GGTGAAAATACTGTTGTGAA+AGG | 0.605474 | 8.2:+10644425 | MS.gene26810:CDS |
| CATGGCCAATAGCAGGGCGA+AGG | 0.605899 | 8.2:+10645183 | MS.gene26810:CDS |
| CGATAACTACAAGCTTCTTG+GGG | 0.608524 | 8.2:-10644556 | None:intergenic |
| GGTTGGAGTTGATACTTCTG+GGG | 0.615833 | 8.2:+10644751 | MS.gene26810:CDS |
| GATAATTGCTGAAAAGGAGA+CGG | 0.617580 | 8.2:+10645234 | MS.gene26810:CDS |
| GGTGGTACCTGTCTCAACGT+TGG | 0.621896 | 8.2:+10643031 | MS.gene26810:CDS |
| AGTATCAACTCCAACCACCT+TGG | 0.623456 | 8.2:-10644744 | None:intergenic |
| ATGGGGACGAATTGGCTCTG+AGG | 0.627284 | 8.2:+10644613 | MS.gene26810:CDS |
| ACCTTAGAGAGAAAGTGTAA+CGG | 0.630266 | 8.2:-10642874 | None:intergenic |
| AAGGCAATTGATAACGCTGA+AGG | 0.632613 | 8.2:+10645202 | MS.gene26810:CDS |
| TTGTGTGCCAACATTGGACC+GGG | 0.636415 | 8.2:-10644986 | None:intergenic |
| GGAGTTGAAACTGACAAGGT+AGG | 0.637183 | 8.2:+10644896 | MS.gene26810:CDS |
| TGGGGTCAAAGTTTCAAATG+TGG | 0.638191 | 8.2:+10644247 | MS.gene26810:CDS |
| TCAGATGTAAAATCTCTACC+TGG | 0.641837 | 8.2:+10644473 | MS.gene26810:CDS |
| GGGTTTGTATAGACAACACC+TGG | 0.647094 | 8.2:-10645082 | None:intergenic |
| AGAAAATTGTATCATCAACA+GGG | 0.647191 | 8.2:+10644513 | MS.gene26810:CDS |
| GTGTCTACAGAGACCTCAGA+TGG | 0.651528 | 8.2:-10644395 | None:intergenic |
| CAAGAAGCTTGTAGTTATCG+GGG | 0.654159 | 8.2:+10644559 | MS.gene26810:CDS |
| AACGACGTCGTCATCATCGG+TGG | 0.658246 | 8.2:+10642926 | MS.gene26810:CDS |
| TGCACATCCAACAATGAGTG+AGG | 0.658611 | 8.2:+10645369 | MS.gene26810:CDS |
| TTTAGCCTCATGGTACATGT+GGG | 0.660235 | 8.2:-10644207 | None:intergenic |
| AGGAGACGGACAAAATATTG+GGG | 0.662760 | 8.2:+10645248 | MS.gene26810:CDS |
| GCAGTATGATGCATCAAGTG+AGG | 0.668547 | 8.2:+10645327 | MS.gene26810:CDS |
| GCTGTTTCTAATCTGACCCG+GGG | 0.668806 | 8.2:+10644308 | MS.gene26810:CDS |
| TGAAAGGGAACTTCCCAACA+CGG | 0.669482 | 8.2:-10645162 | None:intergenic |
| ATCGAAATGGAACCTTGGAA+GGG | 0.671194 | 8.2:-10643060 | None:intergenic |
| ACCACTTGCATCGAAAAGCG+TGG | 0.672031 | 8.2:+10643001 | MS.gene26810:CDS |
| CTCCGCCGATGAAAGAAGAG+CGG | 0.675152 | 8.2:-10642846 | None:intergenic |
| GAAATTCAAGCTGAATACCA+AGG | 0.679504 | 8.2:+10644727 | MS.gene26810:CDS |
| GAAAATTGTATCATCAACAG+GGG | 0.680955 | 8.2:+10644514 | MS.gene26810:CDS |
| GGAGACGGACAAAATATTGG+GGG | 0.685454 | 8.2:+10645249 | MS.gene26810:CDS |
| CTTGTCATAAGTGGCCATTG+CGG | 0.687064 | 8.2:-10645404 | None:intergenic |
| TGCATCATACTGCAATGCAA+TGG | 0.690908 | 8.2:-10645317 | None:intergenic |
| TCCCTACAGAAGCAACCTCG+GGG | 0.694823 | 8.2:-10645102 | None:intergenic |
| AAGCTGAGCAGCTTTAATGG+CGG | 0.697561 | 8.2:-10642969 | None:intergenic |
| ACTGTTGAACCAGCAGCTGG+TGG | 0.697745 | 8.2:+10644788 | MS.gene26810:CDS |
| ACATTCATTTGCCAACCATG+GGG | 0.697828 | 8.2:+10644229 | MS.gene26810:CDS |
| GATAGGAGTTGAAACTGACA+AGG | 0.698372 | 8.2:+10644892 | MS.gene26810:CDS |
| ATCATCGGTGGTGGTCCCGG+CGG | 0.698397 | 8.2:+10642938 | MS.gene26810:CDS |
| TGCTTCTGTAGGGAAGACAG+AGG | 0.698830 | 8.2:+10645111 | MS.gene26810:CDS |
| TTCTTCCCACATGTACCATG+AGG | 0.705759 | 8.2:+10644202 | MS.gene26810:CDS |
| ATTCAAGCTGAATACCAAGG+TGG | 0.721568 | 8.2:+10644730 | MS.gene26810:CDS |
| TGTTGTCTATACAAACCCCG+AGG | 0.780319 | 8.2:+10645087 | MS.gene26810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTACTATTAAAATAATACA+TGG | - | chr8.2:10644143-10644162 | None:intergenic | 10.0% |
| !! | TTACTATTAAAATAATACAT+GGG | - | chr8.2:10644142-10644161 | None:intergenic | 10.0% |
| !! | AAATTGTATGTTAAATGATA+TGG | + | chr8.2:10644019-10644038 | MS.gene26810:intron | 15.0% |
| !! | AGCATATTATATTAAATCAT+TGG | + | chr8.2:10643952-10643971 | MS.gene26810:intron | 15.0% |
| !! | ATATCATTTAACATACAATT+TGG | - | chr8.2:10644020-10644039 | None:intergenic | 15.0% |
| !! | CTAAAACAAAAGATAAAATA+AGG | + | chr8.2:10643447-10643466 | MS.gene26810:intron | 15.0% |
| !! | TACTATTAAAATAATACATG+GGG | - | chr8.2:10644141-10644160 | None:intergenic | 15.0% |
| !!! | TTTTTAATTGATTAAGTTGA+AGG | + | chr8.2:10643171-10643190 | MS.gene26810:intron | 15.0% |
| !!! | TTTTTGTTATTTTCGATTTT+TGG | + | chr8.2:10643202-10643221 | MS.gene26810:intron | 15.0% |
| !! | AATTAAAAAATACTTGACAC+AGG | - | chr8.2:10643849-10643868 | None:intergenic | 20.0% |
| !! | CTATATGAGAAAAAATGAAT+AGG | - | chr8.2:10643103-10643122 | None:intergenic | 20.0% |
| !!! | TTACCTTGTTTTTCTTAAAT+AGG | - | chr8.2:10644343-10644362 | None:intergenic | 20.0% |
| ! | AAGAAAATTGTATCATCAAC+AGG | + | chr8.2:10644512-10644531 | MS.gene26810:CDS | 25.0% |
| ! | ACATTCAATTCGTTAATCAA+CGG | - | chr8.2:10643922-10643941 | None:intergenic | 25.0% |
| ! | AGAAAATTGTATCATCAACA+GGG | + | chr8.2:10644513-10644532 | MS.gene26810:CDS | 25.0% |
| ! | AGAGAGTAAACATATTGTTA+TGG | + | chr8.2:10643895-10643914 | MS.gene26810:intron | 25.0% |
| ! | ATTATTAGATTTAGCTGGAT+GGG | + | chr8.2:10643677-10643696 | MS.gene26810:intron | 25.0% |
| ! | TTCTCATATAGATATAGATG+TGG | + | chr8.2:10643112-10643131 | MS.gene26810:intron | 25.0% |
| !! | TGTTTATATTTCTGTGTCTT+TGG | + | chr8.2:10643286-10643305 | MS.gene26810:intron | 25.0% |
| AAATTAAGTCCAGAAGTGAA+TGG | - | chr8.2:10644866-10644885 | None:intergenic | 30.0% | |
| AACAAGGTAACATATGTCAA+AGG | + | chr8.2:10644353-10644372 | MS.gene26810:CDS | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | + | chr8.2:10643532-10643551 | MS.gene26810:intron | 30.0% | |
| AGGCCTATTTAAGAAAAACA+AGG | + | chr8.2:10644337-10644356 | MS.gene26810:CDS | 30.0% | |
| AGTAGAAAAGTGAATCGAAA+TGG | - | chr8.2:10643076-10643095 | None:intergenic | 30.0% | |
| ATGAATAGCGCTTATGTATA+AGG | + | chr8.2:10643419-10643438 | MS.gene26810:intron | 30.0% | |
| ATGTTTACTCTCTAACATCT+GGG | - | chr8.2:10643888-10643907 | None:intergenic | 30.0% | |
| ATTAAGCTGTTTATCCAAAC+AGG | - | chr8.2:10643382-10643401 | None:intergenic | 30.0% | |
| ATTCACTTCTGGACTTAATT+TGG | + | chr8.2:10644865-10644884 | MS.gene26810:CDS | 30.0% | |
| CTAAACTTGTATTAACCTCT+TGG | + | chr8.2:10643820-10643839 | MS.gene26810:intron | 30.0% | |
| GAAAATTGTATCATCAACAG+GGG | + | chr8.2:10644514-10644533 | MS.gene26810:CDS | 30.0% | |
| GATTATTAGATTTAGCTGGA+TGG | + | chr8.2:10643676-10643695 | MS.gene26810:intron | 30.0% | |
| GTAACATATGTCAAAGGATA+CGG | + | chr8.2:10644359-10644378 | MS.gene26810:CDS | 30.0% | |
| GTATGTTAAATGATATGGTC+TGG | + | chr8.2:10644024-10644043 | MS.gene26810:intron | 30.0% | |
| TATGTTTACTCTCTAACATC+TGG | - | chr8.2:10643889-10643908 | None:intergenic | 30.0% | |
| TCCAGCTAAATCTAATAATC+CGG | - | chr8.2:10643676-10643695 | None:intergenic | 30.0% | |
| TGTCAAGATAATTGCTGAAA+AGG | + | chr8.2:10645228-10645247 | MS.gene26810:CDS | 30.0% | |
| TTAAGCTGTTTATCCAAACA+GGG | - | chr8.2:10643381-10643400 | None:intergenic | 30.0% | |
| ! | AACAGTATTTTCACCTTCAA+CGG | - | chr8.2:10644420-10644439 | None:intergenic | 30.0% |
| ! | ACTCTTGATTTTCTCACTTT+AGG | + | chr8.2:10643990-10644009 | MS.gene26810:intron | 30.0% |
| ! | CTCTTGATTTTCTCACTTTA+GGG | + | chr8.2:10643991-10644010 | MS.gene26810:intron | 30.0% |
| ! | TAAATGATATGGTCTGGAAT+TGG | + | chr8.2:10644030-10644049 | MS.gene26810:intron | 30.0% |
| ! | TAACTTTTCGTAGAGTCATT+TGG | + | chr8.2:10643756-10643775 | MS.gene26810:intron | 30.0% |
| ! | TAGAGATTTTACATCTGAAC+CGG | - | chr8.2:10644471-10644490 | None:intergenic | 30.0% |
| ! | TCTTGATTTTCTCACTTTAG+GGG | + | chr8.2:10643992-10644011 | MS.gene26810:intron | 30.0% |
| !! | CTTTGATTTTGGATGAACAT+CGG | + | chr8.2:10643262-10643281 | MS.gene26810:intron | 30.0% |
| !!! | CTCTTTTTTAAAGTCTACTC+TGG | + | chr8.2:10643790-10643809 | MS.gene26810:intron | 30.0% |
| AAAACCATATTCCACTAGGT+GGG | - | chr8.2:10644098-10644117 | None:intergenic | 35.0% | |
| AAAATTCCTTTCACCATCTG+AGG | + | chr8.2:10644382-10644401 | MS.gene26810:CDS | 35.0% | |
| AAACATTCATTTGCCAACCA+TGG | + | chr8.2:10644227-10644246 | MS.gene26810:CDS | 35.0% | |
| AAAGGAGACGGACAAAATAT+TGG | + | chr8.2:10645246-10645265 | MS.gene26810:CDS | 35.0% | |
| AACATTCATTTGCCAACCAT+GGG | + | chr8.2:10644228-10644247 | MS.gene26810:CDS | 35.0% | |
| AACCAAAACCATATTCCACT+AGG | - | chr8.2:10644102-10644121 | None:intergenic | 35.0% | |
| AAGCATATCATTATAGCCAC+CGG | + | chr8.2:10644449-10644468 | MS.gene26810:CDS | 35.0% | |
| AAGGAGACGGACAAAATATT+GGG | + | chr8.2:10645247-10645266 | MS.gene26810:CDS | 35.0% | |
| ACCGGATTATTAGATTTAGC+TGG | + | chr8.2:10643672-10643691 | MS.gene26810:intron | 35.0% | |
| CAAATGAATGTTTAGCCTCA+TGG | - | chr8.2:10644220-10644239 | None:intergenic | 35.0% | |
| GAAATTCAAGCTGAATACCA+AGG | + | chr8.2:10644727-10644746 | MS.gene26810:CDS | 35.0% | |
| GACAACATCTGCTTCAATTA+TGG | - | chr8.2:10644822-10644841 | None:intergenic | 35.0% | |
| GATAATTGCTGAAAAGGAGA+CGG | + | chr8.2:10645234-10645253 | MS.gene26810:CDS | 35.0% | |
| GGTGAAAATACTGTTGTGAA+AGG | + | chr8.2:10644425-10644444 | MS.gene26810:CDS | 35.0% | |
| TCAGATGTAAAATCTCTACC+TGG | + | chr8.2:10644473-10644492 | MS.gene26810:CDS | 35.0% | |
| TCTTGATTTAATGCCCTGTT+TGG | + | chr8.2:10643365-10643384 | MS.gene26810:intron | 35.0% | |
| TTGTGTTGCCTTCATATTTC+AGG | + | chr8.2:10644169-10644188 | MS.gene26810:intron | 35.0% | |
| ! | AAGGTTTTCCACAAATGTCT+CGG | + | chr8.2:10644937-10644956 | MS.gene26810:CDS | 35.0% |
| ! | AATATTGGGGGTGCATATTA+TGG | + | chr8.2:10645261-10645280 | MS.gene26810:CDS | 35.0% |
| ! | ACCTTAGAGAGAAAGTGTAA+CGG | - | chr8.2:10642877-10642896 | None:intergenic | 35.0% |
| ! | GGACTTAATTTGGACAAGAT+AGG | + | chr8.2:10644875-10644894 | MS.gene26810:CDS | 35.0% |
| !! | GACGCATTTTGGTAAATGAA+AGG | + | chr8.2:10644918-10644937 | MS.gene26810:CDS | 35.0% |
| !!! | CAAGTTAGTTTTTTCTGCTG+AGG | + | chr8.2:10643230-10643249 | MS.gene26810:intron | 35.0% |
| AAAACACTTGCGAGACTGTT+TGG | - | chr8.2:10643588-10643607 | None:intergenic | 40.0% | |
| AAACACTTGCGAGACTGTTT+GGG | - | chr8.2:10643587-10643606 | None:intergenic | 40.0% | |
| AAACCATATTCCACTAGGTG+GGG | - | chr8.2:10644097-10644116 | None:intergenic | 40.0% | |
| AAGCTGTCATGGAGAACTTA+TGG | + | chr8.2:10643508-10643527 | MS.gene26810:intron | 40.0% | |
| AATCGAAATGGAACCTTGGA+AGG | - | chr8.2:10643064-10643083 | None:intergenic | 40.0% | |
| ACATTCATTTGCCAACCATG+GGG | + | chr8.2:10644229-10644248 | MS.gene26810:CDS | 40.0% | |
| AGGAGACGGACAAAATATTG+GGG | + | chr8.2:10645248-10645267 | MS.gene26810:CDS | 40.0% | |
| AGTACTTAGCTGGTAAGGTT+GGG | + | chr8.2:10645038-10645057 | MS.gene26810:CDS | 40.0% | |
| AGTGAATCGAAATGGAACCT+TGG | - | chr8.2:10643068-10643087 | None:intergenic | 40.0% | |
| ATCGAAATGGAACCTTGGAA+GGG | - | chr8.2:10643063-10643082 | None:intergenic | 40.0% | |
| ATGAATGAGTTCTCCTGCAT+TGG | - | chr8.2:10645290-10645309 | None:intergenic | 40.0% | |
| ATTCAAGCTGAATACCAAGG+TGG | + | chr8.2:10644730-10644749 | MS.gene26810:CDS | 40.0% | |
| CAAAACCATATTCCACTAGG+TGG | - | chr8.2:10644099-10644118 | None:intergenic | 40.0% | |
| CAAGAAGCTTGTAGTTATCG+GGG | + | chr8.2:10644559-10644578 | MS.gene26810:CDS | 40.0% | |
| CCAAGAAGCTTGTAGTTATC+GGG | + | chr8.2:10644558-10644577 | MS.gene26810:CDS | 40.0% | |
| CCCAAGAAGCTTGTAGTTAT+CGG | + | chr8.2:10644557-10644576 | MS.gene26810:CDS | 40.0% | |
| CCGATAACTACAAGCTTCTT+GGG | - | chr8.2:10644560-10644579 | None:intergenic | 40.0% | |
| CGATAACTACAAGCTTCTTG+GGG | - | chr8.2:10644559-10644578 | None:intergenic | 40.0% | |
| GATAGGAGTTGAAACTGACA+AGG | + | chr8.2:10644892-10644911 | MS.gene26810:CDS | 40.0% | |
| TAAATAGGCCTTCAATACCC+CGG | - | chr8.2:10644328-10644347 | None:intergenic | 40.0% | |
| TCCGTTACACTTTCTCTCTA+AGG | + | chr8.2:10642873-10642892 | MS.gene26810:CDS | 40.0% | |
| TGAATGAGTTCTCCTGCATT+GGG | - | chr8.2:10645289-10645308 | None:intergenic | 40.0% | |
| TGCATCATACTGCAATGCAA+TGG | - | chr8.2:10645320-10645339 | None:intergenic | 40.0% | |
| TGGGGTCAAAGTTTCAAATG+TGG | + | chr8.2:10644247-10644266 | MS.gene26810:CDS | 40.0% | |
| TGTTGAGTACTTAGCTGGTA+AGG | + | chr8.2:10645033-10645052 | MS.gene26810:CDS | 40.0% | |
| TTAACAGCCTCACTCATTGT+TGG | - | chr8.2:10645379-10645398 | None:intergenic | 40.0% | |
| TTTAGCCTCATGGTACATGT+GGG | - | chr8.2:10644210-10644229 | None:intergenic | 40.0% | |
| ! | AGATTTTACATCTGAACCGG+TGG | - | chr8.2:10644468-10644487 | None:intergenic | 40.0% |
| ! | AGGTTTTCCACAAATGTCTC+GGG | + | chr8.2:10644938-10644957 | MS.gene26810:CDS | 40.0% |
| ! | CACCTAGTGGAATATGGTTT+TGG | + | chr8.2:10644097-10644116 | MS.gene26810:intron | 40.0% |
| ! | CATTTGAAACTTTGACCCCA+TGG | - | chr8.2:10644247-10644266 | None:intergenic | 40.0% |
| ! | TTTGTCTTTTTGCGCCATCA+TGG | - | chr8.2:10644288-10644307 | None:intergenic | 40.0% |
| ! | TTTTCATCAATAGTGACGCC+AGG | - | chr8.2:10644494-10644513 | None:intergenic | 40.0% |
| !! | AAGCTGTTTCTAATCTGACC+CGG | + | chr8.2:10644306-10644325 | MS.gene26810:CDS | 40.0% |
| !! | AAGGCAATTGATAACGCTGA+AGG | + | chr8.2:10645202-10645221 | MS.gene26810:CDS | 40.0% |
| !! | ACTTTCTCTCTAAGGTCAAG+AGG | + | chr8.2:10642881-10642900 | MS.gene26810:CDS | 40.0% |
| !! | CAAAAGCGCCTGAAATATGA+AGG | - | chr8.2:10644180-10644199 | None:intergenic | 40.0% |
| !! | GCAATTGGTGATGTAATTCC+CGG | + | chr8.2:10644968-10644987 | MS.gene26810:CDS | 40.0% |
| !! | GCTGTTTTCTTAAGCTGTCA+TGG | + | chr8.2:10643497-10643516 | MS.gene26810:intron | 40.0% |
| !! | GTGAATTGGCTTGTCATAAG+TGG | - | chr8.2:10645416-10645435 | None:intergenic | 40.0% |
| !! | TGGTTGGAGTTGATACTTCT+GGG | + | chr8.2:10644750-10644769 | MS.gene26810:CDS | 40.0% |
| !!! | GGTGGAGAGTACTTTGATTT+TGG | + | chr8.2:10643251-10643270 | MS.gene26810:intron | 40.0% |
| !!! | GTTAGTTTTTTCTGCTGAGG+TGG | + | chr8.2:10643233-10643252 | MS.gene26810:intron | 40.0% |
| AAATAGGCCTTCAATACCCC+GGG | - | chr8.2:10644327-10644346 | None:intergenic | 45.0% | |
| AAGCTGAATACCAAGGTGGT+TGG | + | chr8.2:10644734-10644753 | MS.gene26810:CDS | 45.0% | |
| ACTGGAGTTCAATACCGTGT+TGG | + | chr8.2:10645148-10645167 | MS.gene26810:CDS | 45.0% | |
| ACTTGACACAGGAAACCAAG+AGG | - | chr8.2:10643838-10643857 | None:intergenic | 45.0% | |
| AGACAAGCGCTTAGACATGA+AGG | - | chr8.2:10643650-10643669 | None:intergenic | 45.0% | |
| AGTATCAACTCCAACCACCT+TGG | - | chr8.2:10644747-10644766 | None:intergenic | 45.0% | |
| ATAGACACCCGAGACATTTG+TGG | - | chr8.2:10644948-10644967 | None:intergenic | 45.0% | |
| ATCGCAGATTGTTCCATCCA+TGG | + | chr8.2:10644655-10644674 | MS.gene26810:CDS | 45.0% | |
| CAGATTGTTCCATCCATGGA+TGG | + | chr8.2:10644659-10644678 | MS.gene26810:CDS | 45.0% | |
| CAGCGTTCTCTTGAAAAGCA+AGG | + | chr8.2:10644701-10644720 | MS.gene26810:CDS | 45.0% | |
| CATATTATGGCACCCAATGC+AGG | + | chr8.2:10645274-10645293 | MS.gene26810:CDS | 45.0% | |
| CATCCATGGATGGAGAAATC+CGG | + | chr8.2:10644669-10644688 | MS.gene26810:CDS | 45.0% | |
| CCCGATAACTACAAGCTTCT+TGG | - | chr8.2:10644561-10644580 | None:intergenic | 45.0% | |
| CTGGAGTTCAATACCGTGTT+GGG | + | chr8.2:10645149-10645168 | MS.gene26810:CDS | 45.0% | |
| CTTGTCATAAGTGGCCATTG+CGG | - | chr8.2:10645407-10645426 | None:intergenic | 45.0% | |
| GAAAACGACGTCGTCATCAT+CGG | + | chr8.2:10642923-10642942 | MS.gene26810:CDS | 45.0% | |
| GACAAGCGCTTAGACATGAA+GGG | - | chr8.2:10643649-10643668 | None:intergenic | 45.0% | |
| GAGTACTTAGCTGGTAAGGT+TGG | + | chr8.2:10645037-10645056 | MS.gene26810:CDS | 45.0% | |
| GATGTTGTCCTTGTATCTGC+TGG | + | chr8.2:10644833-10644852 | MS.gene26810:CDS | 45.0% | |
| GCAGTATGATGCATCAAGTG+AGG | + | chr8.2:10645327-10645346 | MS.gene26810:CDS | 45.0% | |
| GCTTGTGTTGAGTACTTAGC+TGG | + | chr8.2:10645028-10645047 | MS.gene26810:CDS | 45.0% | |
| GGAGACGGACAAAATATTGG+GGG | + | chr8.2:10645249-10645268 | MS.gene26810:CDS | 45.0% | |
| GGAGTTGAAACTGACAAGGT+AGG | + | chr8.2:10644896-10644915 | MS.gene26810:CDS | 45.0% | |
| GGGTTTGTATAGACAACACC+TGG | - | chr8.2:10645085-10645104 | None:intergenic | 45.0% | |
| GTCTAAGCGCTTGTCTTAAC+CGG | + | chr8.2:10643654-10643673 | MS.gene26810:intron | 45.0% | |
| GTTTAGCCTCATGGTACATG+TGG | - | chr8.2:10644211-10644230 | None:intergenic | 45.0% | |
| TGAAACTTTGACCCCATGGT+TGG | - | chr8.2:10644243-10644262 | None:intergenic | 45.0% | |
| TGAAAGGGAACTTCCCAACA+CGG | - | chr8.2:10645165-10645184 | None:intergenic | 45.0% | |
| TGCACATCCAACAATGAGTG+AGG | + | chr8.2:10645369-10645388 | MS.gene26810:CDS | 45.0% | |
| TGTAATTCCCGGTCCAATGT+TGG | + | chr8.2:10644979-10644998 | MS.gene26810:CDS | 45.0% | |
| TGTTGGGAAGTTCCCTTTCA+TGG | + | chr8.2:10645165-10645184 | MS.gene26810:CDS | 45.0% | |
| TGTTGTCTATACAAACCCCG+AGG | + | chr8.2:10645087-10645106 | MS.gene26810:CDS | 45.0% | |
| TTATCGGGGCAGGTTACATT+GGG | + | chr8.2:10644573-10644592 | MS.gene26810:CDS | 45.0% | |
| TTCTTCCCACATGTACCATG+AGG | + | chr8.2:10644202-10644221 | MS.gene26810:CDS | 45.0% | |
| TTGTCCTTGTATCTGCTGGT+AGG | + | chr8.2:10644837-10644856 | MS.gene26810:CDS | 45.0% | |
| ! | AAGCTGAGCAGCTTTAATGG+CGG | - | chr8.2:10642972-10642991 | None:intergenic | 45.0% |
| ! | ACCAAGCTGAGCAGCTTTAA+TGG | - | chr8.2:10642975-10642994 | None:intergenic | 45.0% |
| ! | AGGTTACATTGGGCTAGAGA+TGG | + | chr8.2:10644583-10644602 | MS.gene26810:CDS | 45.0% |
| ! | GATTGACTTAGCTGCCATGA+TGG | + | chr8.2:10644271-10644290 | MS.gene26810:CDS | 45.0% |
| ! | GGTTACATTGGGCTAGAGAT+GGG | + | chr8.2:10644584-10644603 | MS.gene26810:CDS | 45.0% |
| ! | GTGGACTATGACAAAGTACC+AGG | + | chr8.2:10645064-10645083 | MS.gene26810:CDS | 45.0% |
| ! | TGACAAGGTAGGACGCATTT+TGG | + | chr8.2:10644907-10644926 | MS.gene26810:CDS | 45.0% |
| !! | AGCTGTTTCTAATCTGACCC+GGG | + | chr8.2:10644307-10644326 | MS.gene26810:CDS | 45.0% |
| !! | GACGTCGTTTTCATCAGATC+CGG | - | chr8.2:10642915-10642934 | None:intergenic | 45.0% |
| !! | GGTTGGAGTTGATACTTCTG+GGG | + | chr8.2:10644751-10644770 | MS.gene26810:CDS | 45.0% |
| !! | GTGGTTGGAGTTGATACTTC+TGG | + | chr8.2:10644749-10644768 | MS.gene26810:CDS | 45.0% |
| AAGCTTGTAGTTATCGGGGC+AGG | + | chr8.2:10644563-10644582 | MS.gene26810:CDS | 50.0% | |
| AATTGCCTTCGCCCTGCTAT+TGG | - | chr8.2:10645191-10645210 | None:intergenic | 50.0% | |
| ACCACTTGCATCGAAAAGCG+TGG | + | chr8.2:10643001-10643020 | MS.gene26810:CDS | 50.0% | |
| AGGTCAAGAGGTTTCGCTTC+CGG | + | chr8.2:10642893-10642912 | MS.gene26810:CDS | 50.0% | |
| CACTAGGTGGGGTGACTATA+TGG | - | chr8.2:10644086-10644105 | None:intergenic | 50.0% | |
| CAGAGACCTCAGATGGTGAA+AGG | - | chr8.2:10644391-10644410 | None:intergenic | 50.0% | |
| CATATAGTCACCCCACCTAG+TGG | + | chr8.2:10644084-10644103 | MS.gene26810:intron | 50.0% | |
| CCCTGCTATTGGCCATGAAA+GGG | - | chr8.2:10645180-10645199 | None:intergenic | 50.0% | |
| CCCTTTCATGGCCAATAGCA+GGG | + | chr8.2:10645177-10645196 | MS.gene26810:CDS | 50.0% | |
| CGGATTTCTCCATCCATGGA+TGG | - | chr8.2:10644671-10644690 | None:intergenic | 50.0% | |
| CTAACTGTTGAACCAGCAGC+TGG | + | chr8.2:10644785-10644804 | MS.gene26810:CDS | 50.0% | |
| CTTCCCTACAGAAGCAACCT+CGG | - | chr8.2:10645107-10645126 | None:intergenic | 50.0% | |
| CTTCCGGATTTCTCCATCCA+TGG | - | chr8.2:10644675-10644694 | None:intergenic | 50.0% | |
| CTTGTGTGCCAACATTGGAC+CGG | - | chr8.2:10644990-10645009 | None:intergenic | 50.0% | |
| GAAGACAGAGGAGCAGGTTA+AGG | + | chr8.2:10645123-10645142 | MS.gene26810:CDS | 50.0% | |
| GAGAACGCTGAAACTGCTTC+CGG | - | chr8.2:10644691-10644710 | None:intergenic | 50.0% | |
| GAGGAGCAGGTTAAGGAAAC+TGG | + | chr8.2:10645130-10645149 | MS.gene26810:CDS | 50.0% | |
| GAGTCCTACCAGCAGATACA+AGG | - | chr8.2:10644844-10644863 | None:intergenic | 50.0% | |
| GATGCAACCAACGTTGAGAC+AGG | - | chr8.2:10643041-10643060 | None:intergenic | 50.0% | |
| GCACACAAGGCAGAAGAAGA+TGG | + | chr8.2:10645001-10645020 | MS.gene26810:CDS | 50.0% | |
| GCCATTAAAGCTGCTCAGCT+TGG | + | chr8.2:10642971-10642990 | MS.gene26810:CDS | 50.0% | |
| GGCTGTTAAAGAAGCCGCAA+TGG | + | chr8.2:10645390-10645409 | MS.gene26810:CDS | 50.0% | |
| GGGTTCCGCTCTTCTTTCAT+CGG | + | chr8.2:10642841-10642860 | MS.gene26810:CDS | 50.0% | |
| GGTAGGACTCCATTCACTTC+TGG | + | chr8.2:10644854-10644873 | MS.gene26810:CDS | 50.0% | |
| GTCTCGGGTGTCTATGCAAT+TGG | + | chr8.2:10644953-10644972 | MS.gene26810:CDS | 50.0% | |
| GTCTCTGTAGACACCGTTGA+AGG | + | chr8.2:10644404-10644423 | MS.gene26810:CDS | 50.0% | |
| GTGTCTACAGAGACCTCAGA+TGG | - | chr8.2:10644398-10644417 | None:intergenic | 50.0% | |
| GTTATCGGGGCAGGTTACAT+TGG | + | chr8.2:10644572-10644591 | MS.gene26810:CDS | 50.0% | |
| TCACCCCACCTAGTGGAATA+TGG | + | chr8.2:10644091-10644110 | MS.gene26810:intron | 50.0% | |
| TCCCTTTCATGGCCAATAGC+AGG | + | chr8.2:10645176-10645195 | MS.gene26810:CDS | 50.0% | |
| TCTGCCTTGTGTGCCAACAT+TGG | - | chr8.2:10644995-10645014 | None:intergenic | 50.0% | |
| TGCTTCTGTAGGGAAGACAG+AGG | + | chr8.2:10645111-10645130 | MS.gene26810:CDS | 50.0% | |
| TTCCCTACAGAAGCAACCTC+GGG | - | chr8.2:10645106-10645125 | None:intergenic | 50.0% | |
| TTCCGCTCTTCTTTCATCGG+CGG | + | chr8.2:10642844-10642863 | MS.gene26810:CDS | 50.0% | |
| TTGTGTGCCAACATTGGACC+GGG | - | chr8.2:10644989-10645008 | None:intergenic | 50.0% | |
| ! | ACCACGCTTTTCGATGCAAG+TGG | - | chr8.2:10643005-10643024 | None:intergenic | 50.0% |
| ! | ATCGAAAAGCGTGGTGCTCT+TGG | + | chr8.2:10643010-10643029 | MS.gene26810:CDS | 50.0% |
| ! | CTAGAGATGGGCTCTGTATG+GGG | + | chr8.2:10644596-10644615 | MS.gene26810:CDS | 50.0% |
| ! | GCTAGAGATGGGCTCTGTAT+GGG | + | chr8.2:10644595-10644614 | MS.gene26810:CDS | 50.0% |
| !! | AATCTGACCCGGGGTATTGA+AGG | + | chr8.2:10644317-10644336 | MS.gene26810:CDS | 50.0% |
| !! | GCTGTTTCTAATCTGACCCG+GGG | + | chr8.2:10644308-10644327 | MS.gene26810:CDS | 50.0% |
| !! | GGAGTTGATACTTCTGGGGA+TGG | + | chr8.2:10644755-10644774 | MS.gene26810:CDS | 50.0% |
| AACCCCGAGGTTGCTTCTGT+AGG | + | chr8.2:10645100-10645119 | MS.gene26810:CDS | 55.0% | |
| AACGACGTCGTCATCATCGG+TGG | + | chr8.2:10642926-10642945 | MS.gene26810:CDS | 55.0% | |
| ACCCCGAGGTTGCTTCTGTA+GGG | + | chr8.2:10645101-10645120 | MS.gene26810:CDS | 55.0% | |
| ACTGTTGAACCAGCAGCTGG+TGG | + | chr8.2:10644788-10644807 | MS.gene26810:CDS | 55.0% | |
| AGCTGGTAAGGTTGGGCATG+TGG | + | chr8.2:10645045-10645064 | MS.gene26810:CDS | 55.0% | |
| CGGTCCAATGTTGGCACACA+AGG | + | chr8.2:10644988-10645007 | MS.gene26810:CDS | 55.0% | |
| CTCCGCCGATGAAAGAAGAG+CGG | - | chr8.2:10642849-10642868 | None:intergenic | 55.0% | |
| GCCCTGCTATTGGCCATGAA+AGG | - | chr8.2:10645181-10645200 | None:intergenic | 55.0% | |
| GGCTCTGTATGGGGACGAAT+TGG | + | chr8.2:10644605-10644624 | MS.gene26810:CDS | 55.0% | |
| GGTGGTACCTGTCTCAACGT+TGG | + | chr8.2:10643031-10643050 | MS.gene26810:CDS | 55.0% | |
| TCCCTACAGAAGCAACCTCG+GGG | - | chr8.2:10645105-10645124 | None:intergenic | 55.0% | |
| TGTAGGGAAGACAGAGGAGC+AGG | + | chr8.2:10645117-10645136 | MS.gene26810:CDS | 55.0% | |
| ! | CGTTGGTTGCATCCCTTCCA+AGG | + | chr8.2:10643048-10643067 | MS.gene26810:CDS | 55.0% |
| ! | CTATGGCGAACTTGGCTCGT+AGG | + | chr8.2:10642816-10642835 | MS.gene26810:CDS | 55.0% |
| ! | GAAAAGCGTGGTGCTCTTGG+TGG | + | chr8.2:10643013-10643032 | MS.gene26810:CDS | 55.0% |
| ! | GCGAACTTGGCTCGTAGGAA+GGG | + | chr8.2:10642821-10642840 | MS.gene26810:CDS | 55.0% |
| ! | GGCTAGAGATGGGCTCTGTA+TGG | + | chr8.2:10644594-10644613 | MS.gene26810:CDS | 55.0% |
| !! | ATGGGGACGAATTGGCTCTG+AGG | + | chr8.2:10644613-10644632 | MS.gene26810:CDS | 55.0% |
| CATGGCCAATAGCAGGGCGA+AGG | + | chr8.2:10645183-10645202 | MS.gene26810:CDS | 60.0% | |
| GACGTCGTCATCATCGGTGG+TGG | + | chr8.2:10642929-10642948 | MS.gene26810:CDS | 60.0% | |
| GTCTGTTCACCACCAGCTGC+TGG | - | chr8.2:10644800-10644819 | None:intergenic | 60.0% | |
| ! | GGCGAACTTGGCTCGTAGGA+AGG | + | chr8.2:10642820-10642839 | MS.gene26810:CDS | 60.0% |
| ! | GTCATCATCGGTGGTGGTCC+CGG | + | chr8.2:10642935-10642954 | MS.gene26810:CDS | 60.0% |
| AATGGCGGCGACGTAACCGC+CGG | - | chr8.2:10642957-10642976 | None:intergenic | 65.0% | |
| ! | ATCATCGGTGGTGGTCCCGG+CGG | + | chr8.2:10642938-10642957 | MS.gene26810:CDS | 65.0% |
| ATGGCGGCGACGTAACCGCC+GGG | - | chr8.2:10642956-10642975 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 10642812 | 10645441 | 10642812 | ID=MS.gene26810 |
| chr8.2 | mRNA | 10642812 | 10645441 | 10642812 | ID=MS.gene26810.t1;Parent=MS.gene26810 |
| chr8.2 | exon | 10642812 | 10643069 | 10642812 | ID=MS.gene26810.t1.exon1;Parent=MS.gene26810.t1 |
| chr8.2 | CDS | 10642812 | 10643069 | 10642812 | ID=cds.MS.gene26810.t1;Parent=MS.gene26810.t1 |
| chr8.2 | exon | 10644191 | 10645441 | 10644191 | ID=MS.gene26810.t1.exon2;Parent=MS.gene26810.t1 |
| chr8.2 | CDS | 10644191 | 10645441 | 10644191 | ID=cds.MS.gene26810.t1;Parent=MS.gene26810.t1 |
| Gene Sequence |
| Protein sequence |
