Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030334.t1 | XP_003620763.1 | 98 | 505 | 10 | 0 | 1 | 505 | 1 | 505 | 5.10E-291 | 1009.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030334.t1 | Q94AA4 | 79.5 | 483 | 97 | 2 | 4 | 486 | 7 | 487 | 2.8e-229 | 795.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030334.t1 | G7KHY6 | 98.0 | 505 | 10 | 0 | 1 | 505 | 1 | 505 | 3.7e-291 | 1009.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030334 | MS.gene40242 | PPI |
| MS.gene030334 | MS.gene40737 | PPI |
| MS.gene030334 | MS.gene014596 | PPI |
| MS.gene030334 | MS.gene012768 | PPI |
| MS.gene030334 | MS.gene69076 | PPI |
| MS.gene014594 | MS.gene030334 | PPI |
| MS.gene030334 | MS.gene042072 | PPI |
| MS.gene030334 | MS.gene95074 | PPI |
| MS.gene030334 | MS.gene43456 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030334.t1 | MTR_6g090130 | 98.020 | 505 | 10 | 0 | 1 | 505 | 1 | 505 | 0.0 | 1025 |
| MS.gene030334.t1 | MTR_8g102190 | 84.768 | 453 | 68 | 1 | 4 | 455 | 7 | 459 | 0.0 | 818 |
| MS.gene030334.t1 | MTR_3g110395 | 80.983 | 468 | 89 | 0 | 4 | 471 | 8 | 475 | 0.0 | 805 |
| MS.gene030334.t1 | MTR_2g100710 | 77.951 | 449 | 97 | 2 | 15 | 462 | 18 | 465 | 0.0 | 723 |
| MS.gene030334.t1 | MTR_1g090300 | 69.507 | 446 | 133 | 1 | 14 | 459 | 84 | 526 | 0.0 | 666 |
| MS.gene030334.t1 | MTR_8g102190 | 84.469 | 367 | 56 | 1 | 4 | 369 | 7 | 373 | 0.0 | 662 |
| MS.gene030334.t1 | MTR_8g102190 | 85.185 | 351 | 51 | 1 | 4 | 353 | 7 | 357 | 0.0 | 638 |
| MS.gene030334.t1 | MTR_2g100710 | 79.412 | 340 | 69 | 1 | 15 | 353 | 18 | 357 | 0.0 | 563 |
| MS.gene030334.t1 | MTR_4g134290 | 54.214 | 439 | 191 | 5 | 17 | 451 | 27 | 459 | 2.85e-169 | 486 |
| MS.gene030334.t1 | MTR_8g069040 | 46.405 | 459 | 211 | 9 | 20 | 450 | 78 | 529 | 3.96e-134 | 399 |
| MS.gene030334.t1 | MTR_5g032570 | 51.715 | 379 | 175 | 4 | 74 | 450 | 161 | 533 | 2.50e-131 | 392 |
| MS.gene030334.t1 | MTR_2g100670 | 53.279 | 122 | 34 | 4 | 264 | 383 | 31 | 131 | 4.16e-27 | 113 |
| MS.gene030334.t1 | MTR_2g066850 | 70.270 | 74 | 21 | 1 | 163 | 236 | 389 | 461 | 2.48e-23 | 104 |
| MS.gene030334.t1 | MTR_4g062050 | 62.295 | 61 | 22 | 1 | 346 | 406 | 3 | 62 | 1.28e-17 | 81.3 |
| MS.gene030334.t1 | MTR_4g132700 | 26.396 | 197 | 134 | 3 | 86 | 273 | 95 | 289 | 1.76e-12 | 70.1 |
| MS.gene030334.t1 | MTR_2g025020 | 26.425 | 193 | 135 | 3 | 88 | 273 | 93 | 285 | 5.32e-12 | 68.6 |
| MS.gene030334.t1 | MTR_4g079180 | 74.359 | 39 | 10 | 0 | 368 | 406 | 56 | 94 | 1.15e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030334.t1 | AT4G26270 | 79.503 | 483 | 97 | 2 | 4 | 486 | 7 | 487 | 0.0 | 807 |
| MS.gene030334.t1 | AT5G56630 | 81.092 | 476 | 82 | 3 | 5 | 480 | 8 | 475 | 0.0 | 803 |
| MS.gene030334.t1 | AT4G29220 | 80.624 | 449 | 84 | 2 | 4 | 451 | 8 | 454 | 0.0 | 764 |
| MS.gene030334.t1 | AT4G32840 | 79.505 | 444 | 88 | 1 | 7 | 450 | 11 | 451 | 0.0 | 756 |
| MS.gene030334.t1 | AT5G61580 | 69.149 | 470 | 136 | 1 | 14 | 483 | 68 | 528 | 0.0 | 697 |
| MS.gene030334.t1 | AT5G61580 | 69.149 | 470 | 135 | 2 | 14 | 483 | 68 | 527 | 0.0 | 691 |
| MS.gene030334.t1 | AT5G47810 | 54.545 | 418 | 187 | 2 | 35 | 449 | 21 | 438 | 1.51e-165 | 476 |
| MS.gene030334.t1 | AT2G22480 | 47.162 | 458 | 208 | 8 | 20 | 450 | 87 | 537 | 3.55e-138 | 409 |
| MS.gene030334.t1 | AT1G12000 | 26.601 | 203 | 142 | 3 | 78 | 273 | 85 | 287 | 3.22e-13 | 72.4 |
| MS.gene030334.t1 | AT4G04040 | 27.941 | 204 | 139 | 4 | 78 | 273 | 86 | 289 | 3.89e-13 | 72.4 |
Find 116 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGAAATCAGCCGCAATT+TGG | 0.270125 | 6.4:+62272274 | MS.gene030334:CDS |
| CAGATTATTGACAAGTCTTT+TGG | 0.271420 | 6.4:+62270093 | MS.gene030334:intron |
| TGATATGAAGGGAGGATATA+AGG | 0.278671 | 6.4:+62269444 | MS.gene030334:intron |
| ATGGATATCTCAAAGTATTA+AGG | 0.284987 | 6.4:+62271154 | MS.gene030334:CDS |
| GTCCAAGGGGAGTACATTTC+CGG | 0.297178 | 6.4:+62269086 | MS.gene030334:CDS |
| GGGTTGTCTTGCAAAGGATT+AGG | 0.303588 | 6.4:-62268480 | None:intergenic |
| ACTGAACCTAAGGTTATTAC+TGG | 0.316153 | 6.4:+62267939 | MS.gene030334:CDS |
| CTTGCTCAAAGTGCTGTTCA+TGG | 0.317363 | 6.4:+62271559 | MS.gene030334:CDS |
| GGCAAGAAACAGGATGCTTC+TGG | 0.332763 | 6.4:+62271104 | MS.gene030334:CDS |
| CCTATATATTTGAGAGTAAT+GGG | 0.345012 | 6.4:-62271377 | None:intergenic |
| TGTTGACTGTTGCTTGATTC+CGG | 0.345057 | 6.4:+62270947 | MS.gene030334:CDS |
| GAATTTCAGGTTTATATCAT+TGG | 0.350539 | 6.4:+62269683 | MS.gene030334:intron |
| CCCATTACTCTCAAATATAT+AGG | 0.357787 | 6.4:+62271377 | MS.gene030334:CDS |
| GATGAAATCAGCCGCAATTT+GGG | 0.363995 | 6.4:+62272275 | MS.gene030334:CDS |
| CTGCGTACGGGCGGGATATC+CGG | 0.372731 | 6.4:+62272326 | MS.gene030334:CDS |
| GGTTGTCTTGCAAAGGATTA+GGG | 0.376224 | 6.4:-62268479 | None:intergenic |
| TATGGCGTGACTCGAGTTCT+TGG | 0.377837 | 6.4:+62269333 | MS.gene030334:CDS |
| AACAAACTTCTTCAAGATGT+TGG | 0.386582 | 6.4:+62271128 | MS.gene030334:CDS |
| TGTATGTTATTAACACTTGA+AGG | 0.388129 | 6.4:-62269499 | None:intergenic |
| GAGAGACATACTGGAAGATC+AGG | 0.404517 | 6.4:-62268011 | None:intergenic |
| GATAGAAGGCTCAAGGAAAA+TGG | 0.418085 | 6.4:+62271017 | MS.gene030334:CDS |
| GGTCTCAAATGTTCGGTTGT+AGG | 0.421467 | 6.4:+62269921 | MS.gene030334:CDS |
| GATATGAAGGGAGGATATAA+GGG | 0.422643 | 6.4:+62269445 | MS.gene030334:intron |
| ACAAACTTCTTCAAGATGTT+GGG | 0.423102 | 6.4:+62271129 | MS.gene030334:CDS |
| TCTGCAATCTGGCAAGAAAC+AGG | 0.429425 | 6.4:+62271094 | MS.gene030334:CDS |
| ACATTGTTCAGAAGACATTT+CGG | 0.436079 | 6.4:+62272250 | MS.gene030334:CDS |
| TACCGGGATATCGTTATCAA+TGG | 0.448113 | 6.4:-62269955 | None:intergenic |
| ACCTATATATTTGAGAGTAA+TGG | 0.448645 | 6.4:-62271378 | None:intergenic |
| TCTATGAATATATAGATAGA+AGG | 0.452502 | 6.4:+62271003 | MS.gene030334:CDS |
| TCTTCTGAACAATGTCCATC+TGG | 0.456228 | 6.4:-62272242 | None:intergenic |
| ACATTGTCAGAAGCATTACT+TGG | 0.461087 | 6.4:-62271523 | None:intergenic |
| TGTAGCTTACACCATATGTA+TGG | 0.463233 | 6.4:+62269315 | MS.gene030334:CDS |
| TGCGGTACCAGTCCTGCGTA+CGG | 0.464772 | 6.4:+62272313 | MS.gene030334:CDS |
| CGCCGGAAATGTACTCCCCT+TGG | 0.465388 | 6.4:-62269088 | None:intergenic |
| CACTTTACAACTGAGTAAGC+AGG | 0.467208 | 6.4:-62268501 | None:intergenic |
| AATGGGCAGCGTCTTCTCTC+TGG | 0.468360 | 6.4:-62271360 | None:intergenic |
| CTTTGACACTGCTGTTGAAG+AGG | 0.469440 | 6.4:+62270116 | MS.gene030334:CDS |
| GTTTATATCATTGGAGGAGA+TGG | 0.470046 | 6.4:+62269692 | MS.gene030334:CDS |
| CCTAATGAACTTACATAGAA+AGG | 0.472686 | 6.4:-62271643 | None:intergenic |
| CTCGAGTCACGCCATACATA+TGG | 0.473209 | 6.4:-62269326 | None:intergenic |
| TCAAGATCGTGGAATCAATC+AGG | 0.480859 | 6.4:+62269591 | MS.gene030334:CDS |
| CCAGGACCTTCGAGGTAAAA+CGG | 0.482660 | 6.4:-62270975 | None:intergenic |
| TTCTTCAAGATGTTGGGCTA+TGG | 0.487077 | 6.4:+62271135 | MS.gene030334:CDS |
| CTTACCGAGAGTCTGCAATC+TGG | 0.495651 | 6.4:+62271083 | MS.gene030334:CDS |
| GGAGTACATTTCCGGCGCGC+TGG | 0.500983 | 6.4:+62269094 | MS.gene030334:CDS |
| GGAGCAATGGCAGGTTACAC+TGG | 0.509720 | 6.4:+62271580 | MS.gene030334:CDS |
| TGGACTCAACACTGTGATAC+GGG | 0.511637 | 6.4:+62269284 | MS.gene030334:CDS |
| GATGGGTTTAACTGAACCTA+AGG | 0.513157 | 6.4:+62267929 | None:intergenic |
| GCTGTTCATGGAGCAATGGC+AGG | 0.515599 | 6.4:+62271571 | MS.gene030334:CDS |
| TTTCAGGTTTATATCATTGG+AGG | 0.516064 | 6.4:+62269686 | MS.gene030334:intron |
| CTGGACTCAACACTGTGATA+CGG | 0.518222 | 6.4:+62269283 | MS.gene030334:CDS |
| ATCCCGCCCGTACGCAGGAC+TGG | 0.522260 | 6.4:-62272320 | None:intergenic |
| TGGAACAGCTCGGATCATAT+AGG | 0.524285 | 6.4:-62271503 | None:intergenic |
| GCAGGACCAGTAATAACCTT+AGG | 0.527394 | 6.4:-62267945 | None:intergenic |
| CTTGCCAGATTGCAGACTCT+CGG | 0.528413 | 6.4:-62271087 | None:intergenic |
| GCGGTACCAGTCCTGCGTAC+GGG | 0.531407 | 6.4:+62272314 | MS.gene030334:CDS |
| AAGGCGTGGTCTCAAATGTT+CGG | 0.532379 | 6.4:+62269914 | MS.gene030334:CDS |
| GACTTGACCTCCACAAAACT+AGG | 0.538080 | 6.4:-62272176 | None:intergenic |
| AAGCGTGGAGGAACTATCCT+TGG | 0.539123 | 6.4:+62269523 | MS.gene030334:CDS |
| CGCAGGACTGGTACCGCAAG+CGG | 0.544238 | 6.4:-62272308 | None:intergenic |
| TCGAGGTAAAACGGCGACTC+CGG | 0.544739 | 6.4:-62270966 | None:intergenic |
| TCTGACGTGGTCCAGCGCGC+CGG | 0.545765 | 6.4:-62269105 | None:intergenic |
| AAGGTTATTACTGGTCCTGC+TGG | 0.547259 | 6.4:+62267948 | MS.gene030334:CDS |
| TACACAAGTGGACTTGTCAA+TGG | 0.553537 | 6.4:+62271604 | MS.gene030334:CDS |
| TTGTTCACAAAGATAGTCCA+AGG | 0.554381 | 6.4:+62269071 | MS.gene030334:CDS |
| AACCATTGATAACGATATCC+CGG | 0.554447 | 6.4:+62269953 | MS.gene030334:CDS |
| ACATGTGGAGGGCTATGTCC+TGG | 0.555069 | 6.4:+62269264 | MS.gene030334:CDS |
| TATCGGTGTTGTCAAGCTGA+TGG | 0.557994 | 6.4:+62270191 | MS.gene030334:CDS |
| CGTATCACAGTGTTGAGTCC+AGG | 0.561143 | 6.4:-62269282 | None:intergenic |
| TGGAGGAGATGGAACTCAGA+GGG | 0.567340 | 6.4:+62269703 | MS.gene030334:CDS |
| GGTTACACTGGCTACACAAG+TGG | 0.567624 | 6.4:+62271592 | MS.gene030334:CDS |
| GTCCACCTCGCGAAGTACCA+AGG | 0.568215 | 6.4:-62269540 | None:intergenic |
| GCGCGCTGGACCACGTCAGA+AGG | 0.568366 | 6.4:+62269108 | MS.gene030334:CDS |
| ATCGGTGTTGTCAAGCTGAT+GGG | 0.572521 | 6.4:+62270192 | MS.gene030334:CDS |
| ATCGTGATTGCTGAAGGAGC+GGG | 0.574805 | 6.4:+62271050 | MS.gene030334:CDS |
| ACAGCTCGGATCATATAGGT+TGG | 0.574984 | 6.4:-62271499 | None:intergenic |
| ATGGTCATCGTGATTGCTGA+AGG | 0.575473 | 6.4:+62271044 | MS.gene030334:CDS |
| CGGATATCCCGCCCGTACGC+AGG | 0.580125 | 6.4:-62272325 | None:intergenic |
| GCTGCAATTGTTACATGTGG+AGG | 0.583011 | 6.4:+62269252 | MS.gene030334:CDS |
| TAAGCAGGGTTGTCTTGCAA+AGG | 0.591067 | 6.4:-62268486 | None:intergenic |
| GTACCAGTCCTGCGTACGGG+CGG | 0.595874 | 6.4:+62272317 | MS.gene030334:CDS |
| ATCCTTGGTACTTCGCGAGG+TGG | 0.597856 | 6.4:+62269538 | MS.gene030334:CDS |
| AAGTGCTGTTCATGGAGCAA+TGG | 0.598362 | 6.4:+62271567 | MS.gene030334:CDS |
| TACCAGTCCTGCGTACGGGC+GGG | 0.598581 | 6.4:+62272318 | MS.gene030334:CDS |
| CAAGCTGCAATTGTTACATG+TGG | 0.599033 | 6.4:+62269249 | MS.gene030334:CDS |
| TGATGACACAGTTCCTCAGA+AGG | 0.603083 | 6.4:+62268642 | MS.gene030334:CDS |
| CTGCAATTGTTACATGTGGA+GGG | 0.607796 | 6.4:+62269253 | MS.gene030334:CDS |
| CATCGTGATTGCTGAAGGAG+CGG | 0.608277 | 6.4:+62271049 | MS.gene030334:CDS |
| ATATATAGATAGAAGGCTCA+AGG | 0.612517 | 6.4:+62271010 | MS.gene030334:CDS |
| AGAGTCCACCAGGACCTTCG+AGG | 0.613611 | 6.4:-62270983 | None:intergenic |
| AAGCATTACTTGGAACAGCT+CGG | 0.613912 | 6.4:-62271513 | None:intergenic |
| TCTTCAAGTACATAACCAGC+AGG | 0.613917 | 6.4:-62267963 | None:intergenic |
| GTTAATAACATACACAAGCG+TGG | 0.614012 | 6.4:+62269508 | MS.gene030334:CDS |
| ACTTTACAACTGAGTAAGCA+GGG | 0.616682 | 6.4:-62268500 | None:intergenic |
| GTTGACAGTATTCAAGATCG+TGG | 0.619307 | 6.4:+62269580 | MS.gene030334:CDS |
| GACTCGAGTTCTTGGAATCG+AGG | 0.621298 | 6.4:+62269341 | MS.gene030334:CDS |
| TTGTGATAACTGATAGAATG+TGG | 0.624098 | 6.4:+62272126 | MS.gene030334:CDS |
| ATATATTCATAGAGTCCACC+AGG | 0.626049 | 6.4:-62270993 | None:intergenic |
| CGAAAACATACCTTCTGACG+TGG | 0.630278 | 6.4:-62269118 | None:intergenic |
| GGGATGCTTAGCTCCGCTTG+CGG | 0.639885 | 6.4:+62272295 | MS.gene030334:CDS |
| GAGCTAAGCATCCCAAATTG+CGG | 0.641607 | 6.4:-62272286 | None:intergenic |
| GCTCAAGGAAAATGGTCACA+TGG | 0.645970 | 6.4:+62271025 | MS.gene030334:CDS |
| ATACAGGAAGTCAGAAGGCG+TGG | 0.646172 | 6.4:+62269900 | MS.gene030334:intron |
| TATCGATACAGGAAGTCAGA+AGG | 0.648533 | 6.4:+62269895 | MS.gene030334:intron |
| ACTATCCTTGGTACTTCGCG+AGG | 0.651849 | 6.4:+62269535 | MS.gene030334:CDS |
| GAGGAACTGTGTCATCAACA+TGG | 0.653646 | 6.4:-62268636 | None:intergenic |
| TGTTCACAAAGATAGTCCAA+GGG | 0.663549 | 6.4:+62269072 | MS.gene030334:CDS |
| TCATTGGACGAATTACCAGA+TGG | 0.665549 | 6.4:+62272227 | MS.gene030334:CDS |
| AAGCTGATGGGTCGATACAG+CGG | 0.679140 | 6.4:+62270204 | MS.gene030334:CDS |
| TGTGATAACTGATAGAATGT+GGG | 0.690759 | 6.4:+62272127 | MS.gene030334:CDS |
| TAACTGATAGAATGTGGGCG+AGG | 0.705859 | 6.4:+62272132 | MS.gene030334:CDS |
| TTGGAGGAGATGGAACTCAG+AGG | 0.707119 | 6.4:+62269702 | MS.gene030334:CDS |
| GTTCACAAAGATAGTCCAAG+GGG | 0.722966 | 6.4:+62269073 | MS.gene030334:CDS |
| GGAGGAGATGGAACTCAGAG+GGG | 0.731781 | 6.4:+62269704 | MS.gene030334:CDS |
| GGAATGTAATCAGACAAGTG+AGG | 0.735608 | 6.4:-62267990 | None:intergenic |
| AATAACATACACAAGCGTGG+AGG | 0.738854 | 6.4:+62269511 | MS.gene030334:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAGATTAATTATTAATATA+TGG | + | chr6.4:62268425-62268444 | MS.gene030334:intron | 10.0% |
| !! | TAATAATAATAATTTACTGT+CGG | - | chr6.4:62268169-62268188 | None:intergenic | 10.0% |
| !!! | TAATTTTCAATTGATTATTA+TGG | + | chr6.4:62268687-62268706 | MS.gene030334:intron | 10.0% |
| !! | TATTAATTATGTTGGATTAT+TGG | + | chr6.4:62268184-62268203 | MS.gene030334:intron | 15.0% |
| !!! | CATAAAATTATGCTTTTTTT+TGG | + | chr6.4:62268382-62268401 | MS.gene030334:intron | 15.0% |
| !!! | TATCTTATAATTACTTTTGA+AGG | + | chr6.4:62271289-62271308 | MS.gene030334:intron | 15.0% |
| !!! | TTTTAGTGAAATTTATATCT+TGG | + | chr6.4:62268321-62268340 | MS.gene030334:intron | 15.0% |
| !! | AATAAATGAAATGCAAATTC+AGG | - | chr6.4:62269015-62269034 | None:intergenic | 20.0% |
| !! | ATATATGGTTTAATTGTACT+TGG | + | chr6.4:62268440-62268459 | MS.gene030334:intron | 20.0% |
| !! | CAAAAGTAATTATAAGATAG+CGG | - | chr6.4:62271288-62271307 | None:intergenic | 20.0% |
| !! | CAAGTACAATTTCTTTAATT+TGG | - | chr6.4:62268762-62268781 | None:intergenic | 20.0% |
| !! | TCTATGAATATATAGATAGA+AGG | + | chr6.4:62271003-62271022 | MS.gene030334:CDS | 20.0% |
| !!! | AAACAAATTCAAGTTATATG+AGG | - | chr6.4:62270014-62270033 | None:intergenic | 20.0% |
| !!! | AGAAAATGTTTTGATATGAA+GGG | + | chr6.4:62269433-62269452 | MS.gene030334:intron | 20.0% |
| !!! | AGCAATGTTCTATTTTTTTT+TGG | + | chr6.4:62270489-62270508 | MS.gene030334:intron | 20.0% |
| !!! | ATTATGCTTTTTTTTGGTTA+AGG | + | chr6.4:62268388-62268407 | MS.gene030334:intron | 20.0% |
| !!! | ATTTCTTTAATTTGGATCAA+AGG | - | chr6.4:62268754-62268773 | None:intergenic | 20.0% |
| !!! | TTTCTTTAATTTGGATCAAA+GGG | - | chr6.4:62268753-62268772 | None:intergenic | 20.0% |
| ! | AAATAGAGCATAATCAGTAT+TGG | - | chr6.4:62271250-62271269 | None:intergenic | 25.0% |
| ! | AATTCAGTGTAATTATGTGT+CGG | - | chr6.4:62268906-62268925 | None:intergenic | 25.0% |
| ! | AATTTATATCTTGGATTGCA+TGG | + | chr6.4:62268330-62268349 | MS.gene030334:intron | 25.0% |
| ! | ACAGATCAGATATGAAAAAT+TGG | + | chr6.4:62268231-62268250 | MS.gene030334:intron | 25.0% |
| ! | ACATTGAAAAGAACTAAACT+CGG | + | chr6.4:62271851-62271870 | MS.gene030334:intron | 25.0% |
| ! | ACCTATATATTTGAGAGTAA+TGG | - | chr6.4:62271381-62271400 | None:intergenic | 25.0% |
| ! | ATAAAAAAAACTGTGATAGC+AGG | - | chr6.4:62269392-62269411 | None:intergenic | 25.0% |
| ! | CATTTCAGATTTGATATAAG+TGG | + | chr6.4:62271213-62271232 | MS.gene030334:intron | 25.0% |
| ! | CCTATATATTTGAGAGTAAT+GGG | - | chr6.4:62271380-62271399 | None:intergenic | 25.0% |
| ! | GAAAGTCTCGTTTAAATTAT+CGG | - | chr6.4:62269752-62269771 | None:intergenic | 25.0% |
| ! | GAAATGAAACATTAACAGTT+TGG | - | chr6.4:62271777-62271796 | None:intergenic | 25.0% |
| ! | GGGTATTAAAAAAAATTGGA+GGG | + | chr6.4:62270694-62270713 | MS.gene030334:intron | 25.0% |
| ! | TACAAAATATTGTCAAGTAG+CGG | + | chr6.4:62270374-62270393 | MS.gene030334:intron | 25.0% |
| ! | TGTATGTTATTAACACTTGA+AGG | - | chr6.4:62269502-62269521 | None:intergenic | 25.0% |
| ! | TTAAAACAAGAGGAAGAAAA+TGG | + | chr6.4:62270667-62270686 | MS.gene030334:intron | 25.0% |
| ! | TTAATATCGCTATGAATTTC+AGG | + | chr6.4:62269670-62269689 | MS.gene030334:intron | 25.0% |
| !! | AATTCAAGTTATATGAGGTT+TGG | - | chr6.4:62270009-62270028 | None:intergenic | 25.0% |
| !! | ACATTTTCATCACAAGATTT+TGG | - | chr6.4:62268803-62268822 | None:intergenic | 25.0% |
| !! | ATATCGTTATCAATGGTTTT+CGG | - | chr6.4:62269951-62269970 | None:intergenic | 25.0% |
| !! | ATGGATATCTCAAAGTATTA+AGG | + | chr6.4:62271154-62271173 | MS.gene030334:CDS | 25.0% |
| !!! | ATTAAACATTTTGATCTTCC+AGG | + | chr6.4:62271328-62271347 | MS.gene030334:intron | 25.0% |
| !!! | ATTATAAGATAGCGGAAAAT+TGG | - | chr6.4:62271280-62271299 | None:intergenic | 25.0% |
| !!! | ATTTATTGCCCTTTTGAAAT+TGG | + | chr6.4:62269194-62269213 | MS.gene030334:intron | 25.0% |
| !!! | GAAAGTTTTGAAAATGGTAT+CGG | + | chr6.4:62270174-62270193 | MS.gene030334:CDS | 25.0% |
| !!! | GAATTTCAGGTTTATATCAT+TGG | + | chr6.4:62269683-62269702 | MS.gene030334:intron | 25.0% |
| !!! | GAGAAAATGTTTTGATATGA+AGG | + | chr6.4:62269432-62269451 | MS.gene030334:intron | 25.0% |
| !!! | GCTATCACAGTTTTTTTTAT+TGG | + | chr6.4:62269392-62269411 | MS.gene030334:intron | 25.0% |
| !!! | TTCACTTTTTTCACATTTTC+AGG | + | chr6.4:62268602-62268621 | MS.gene030334:intron | 25.0% |
| AAAAAAAAAATTGAGGCCCA+TGG | + | chr6.4:62270739-62270758 | MS.gene030334:intron | 30.0% | |
| AACAAACTTCTTCAAGATGT+TGG | + | chr6.4:62271128-62271147 | MS.gene030334:CDS | 30.0% | |
| ACAAACTTCTTCAAGATGTT+GGG | + | chr6.4:62271129-62271148 | MS.gene030334:CDS | 30.0% | |
| ACATTGTTCAGAAGACATTT+CGG | + | chr6.4:62272250-62272269 | MS.gene030334:CDS | 30.0% | |
| ACCACAATGTGCAATAAAAA+TGG | - | chr6.4:62269984-62270003 | None:intergenic | 30.0% | |
| ATATATAGATAGAAGGCTCA+AGG | + | chr6.4:62271010-62271029 | MS.gene030334:CDS | 30.0% | |
| ATTATTATGCGATACCTACT+TGG | + | chr6.4:62270351-62270370 | MS.gene030334:intron | 30.0% | |
| ATTCTGTGATTACCTTCAAT+TGG | + | chr6.4:62270276-62270295 | MS.gene030334:intron | 30.0% | |
| CAATCTATGAAGCACATATA+CGG | - | chr6.4:62268975-62268994 | None:intergenic | 30.0% | |
| CCCATTACTCTCAAATATAT+AGG | + | chr6.4:62271377-62271396 | MS.gene030334:CDS | 30.0% | |
| CCTAATGAACTTACATAGAA+AGG | - | chr6.4:62271646-62271665 | None:intergenic | 30.0% | |
| CCTTTCTATGTAAGTTCATT+AGG | + | chr6.4:62271643-62271662 | MS.gene030334:intron | 30.0% | |
| CTAATTCTAATAGGCCTAAA+AGG | + | chr6.4:62270644-62270663 | MS.gene030334:intron | 30.0% | |
| CTGAATGACCAATTTCAAAA+GGG | - | chr6.4:62269205-62269224 | None:intergenic | 30.0% | |
| GATAGCATTATGACTGTTTA+TGG | + | chr6.4:62271689-62271708 | MS.gene030334:intron | 30.0% | |
| GGTTAAGGAATAAAGATCAA+TGG | + | chr6.4:62268403-62268422 | MS.gene030334:intron | 30.0% | |
| TAATACACTTTCCACTTCAA+TGG | - | chr6.4:62269860-62269879 | None:intergenic | 30.0% | |
| TCATAGCGATATTAATCAGA+TGG | - | chr6.4:62269665-62269684 | None:intergenic | 30.0% | |
| TCTTAAAGTTACCCTGAAAA+TGG | - | chr6.4:62272000-62272019 | None:intergenic | 30.0% | |
| TGTGATAACTGATAGAATGT+GGG | + | chr6.4:62272127-62272146 | MS.gene030334:CDS | 30.0% | |
| TTGTGATAACTGATAGAATG+TGG | + | chr6.4:62272126-62272145 | MS.gene030334:CDS | 30.0% | |
| ! | CAGATTATTGACAAGTCTTT+TGG | + | chr6.4:62270093-62270112 | MS.gene030334:intron | 30.0% |
| ! | CTTTTAGGCCTATTAGAATT+AGG | - | chr6.4:62270646-62270665 | None:intergenic | 30.0% |
| ! | GACAATATTTTGTACCAAGT+AGG | - | chr6.4:62270368-62270387 | None:intergenic | 30.0% |
| ! | GGGGTATTAAAAAAAATTGG+AGG | + | chr6.4:62270693-62270712 | MS.gene030334:intron | 30.0% |
| ! | GTTTTACCGAACTATTGTAA+CGG | - | chr6.4:62271750-62271769 | None:intergenic | 30.0% |
| ! | TACAGTTTAATTTAGCGGTT+CGG | + | chr6.4:62271945-62271964 | MS.gene030334:intron | 30.0% |
| ! | TATCGTTATCAATGGTTTTC+GGG | - | chr6.4:62269950-62269969 | None:intergenic | 30.0% |
| ! | TGAAAATGTTTCTGTGAAGT+TGG | + | chr6.4:62268814-62268833 | MS.gene030334:intron | 30.0% |
| ! | TGCAATAAAAATGGACTTAC+CGG | - | chr6.4:62269975-62269994 | None:intergenic | 30.0% |
| ! | TTCGGTACAGTTTAATTTAG+CGG | + | chr6.4:62271940-62271959 | MS.gene030334:intron | 30.0% |
| ! | TTTTCTCAAGCTACTATTCA+TGG | + | chr6.4:62268052-62268071 | MS.gene030334:intron | 30.0% |
| !! | ACCAATAAACTGAGTATTGA+AGG | - | chr6.4:62270254-62270273 | None:intergenic | 30.0% |
| !! | CTGGGGGTATTAAAAAAAAT+TGG | + | chr6.4:62270690-62270709 | MS.gene030334:intron | 30.0% |
| !! | CTTTCAAACTTGTTGGTTTA+TGG | + | chr6.4:62269767-62269786 | MS.gene030334:intron | 30.0% |
| !! | GGGTAACTTTAAGATGTTAT+AGG | + | chr6.4:62272006-62272025 | MS.gene030334:intron | 30.0% |
| !! | TATAAGGTGTCGTATATATG+CGG | + | chr6.4:62270552-62270571 | MS.gene030334:intron | 30.0% |
| !! | TCCATTTTTATTGCACATTG+TGG | + | chr6.4:62269980-62269999 | MS.gene030334:intron | 30.0% |
| !! | TTTCAGGTTTATATCATTGG+AGG | + | chr6.4:62269686-62269705 | MS.gene030334:intron | 30.0% |
| !!! | AAATGTTTTGATATGAAGGG+AGG | + | chr6.4:62269436-62269455 | MS.gene030334:intron | 30.0% |
| !!! | AACAAATCAACCTAGTTTTG+TGG | + | chr6.4:62272166-62272185 | MS.gene030334:CDS | 30.0% |
| !!! | GAAGCTGAAAGTTTTGAAAA+TGG | + | chr6.4:62270168-62270187 | MS.gene030334:CDS | 30.0% |
| !!! | TCCTCTTGTTTTAACCTTTT+AGG | - | chr6.4:62270661-62270680 | None:intergenic | 30.0% |
| AAATGACTACCGTATACATG+AGG | + | chr6.4:62270590-62270609 | MS.gene030334:intron | 35.0% | |
| AACGAGACTTTCAAACTTGT+TGG | + | chr6.4:62269760-62269779 | MS.gene030334:intron | 35.0% | |
| ACTGAACCTAAGGTTATTAC+TGG | + | chr6.4:62267939-62267958 | MS.gene030334:CDS | 35.0% | |
| ACTTTACAACTGAGTAAGCA+GGG | - | chr6.4:62268503-62268522 | None:intergenic | 35.0% | |
| ATATATTCATAGAGTCCACC+AGG | - | chr6.4:62270996-62271015 | None:intergenic | 35.0% | |
| CAAAAAAGGCGAAAACTCAT+TGG | + | chr6.4:62272211-62272230 | MS.gene030334:CDS | 35.0% | |
| CAAAAAATACCAACCTTCTG+AGG | - | chr6.4:62268658-62268677 | None:intergenic | 35.0% | |
| CAAGAGGACCTAATTCTAAT+AGG | + | chr6.4:62270635-62270654 | MS.gene030334:intron | 35.0% | |
| CCTGAATGACCAATTTCAAA+AGG | - | chr6.4:62269206-62269225 | None:intergenic | 35.0% | |
| CTCAACTTGATTATCGATAC+AGG | + | chr6.4:62269884-62269903 | MS.gene030334:intron | 35.0% | |
| GAGGTACATATCGATCTTTA+TGG | + | chr6.4:62269360-62269379 | MS.gene030334:intron | 35.0% | |
| GATATGAAGGGAGGATATAA+GGG | + | chr6.4:62269445-62269464 | MS.gene030334:intron | 35.0% | |
| GCCTAAAAGGTTAAAACAAG+AGG | + | chr6.4:62270657-62270676 | MS.gene030334:intron | 35.0% | |
| GCCTTCAATACTCAGTTTAT+TGG | + | chr6.4:62270250-62270269 | MS.gene030334:intron | 35.0% | |
| GTTAATAACATACACAAGCG+TGG | + | chr6.4:62269508-62269527 | MS.gene030334:CDS | 35.0% | |
| GTTTATATCATTGGAGGAGA+TGG | + | chr6.4:62269692-62269711 | MS.gene030334:CDS | 35.0% | |
| GTTTATGGTTCAGTTCAAGA+TGG | + | chr6.4:62271704-62271723 | MS.gene030334:intron | 35.0% | |
| TCTTCCGATGAAGACAAAAA+AGG | + | chr6.4:62272197-62272216 | MS.gene030334:CDS | 35.0% | |
| TGAAAAGAACTAAACTCGGA+CGG | + | chr6.4:62271855-62271874 | MS.gene030334:intron | 35.0% | |
| TGATATGAAGGGAGGATATA+AGG | + | chr6.4:62269444-62269463 | MS.gene030334:intron | 35.0% | |
| TGCACATTAGCATCACTAAT+CGG | + | chr6.4:62270039-62270058 | MS.gene030334:intron | 35.0% | |
| TGCATCTCCAATAACAAGTA+GGG | + | chr6.4:62268724-62268743 | MS.gene030334:intron | 35.0% | |
| TGTAGCTTACACCATATGTA+TGG | + | chr6.4:62269315-62269334 | MS.gene030334:CDS | 35.0% | |
| TGTTCACAAAGATAGTCCAA+GGG | + | chr6.4:62269072-62269091 | MS.gene030334:CDS | 35.0% | |
| TTACCCTGAAAATGGTATCT+AGG | - | chr6.4:62271992-62272011 | None:intergenic | 35.0% | |
| TTATATCTTGGATTGCATGG+TGG | + | chr6.4:62268333-62268352 | MS.gene030334:intron | 35.0% | |
| TTGCATCTCCAATAACAAGT+AGG | + | chr6.4:62268723-62268742 | MS.gene030334:intron | 35.0% | |
| TTGTTCACAAAGATAGTCCA+AGG | + | chr6.4:62269071-62269090 | MS.gene030334:CDS | 35.0% | |
| ! | AAATGTTTCTGTGAAGTTGG+TGG | + | chr6.4:62268817-62268836 | MS.gene030334:intron | 35.0% |
| ! | AATGCTTTGTTCAAATTCCG+CGG | - | chr6.4:62270331-62270350 | None:intergenic | 35.0% |
| ! | ACTCCTAGATACCATTTTCA+GGG | + | chr6.4:62271986-62272005 | MS.gene030334:intron | 35.0% |
| ! | ATTACATTTTGCCGCAAGAA+TGG | + | chr6.4:62272036-62272055 | MS.gene030334:intron | 35.0% |
| ! | CTTTTCAATGTGCTTCAGTT+CGG | - | chr6.4:62271842-62271861 | None:intergenic | 35.0% |
| ! | GATTTTGTTCTGACTTTGAC+AGG | + | chr6.4:62269045-62269064 | MS.gene030334:intron | 35.0% |
| ! | GCAATAAAAATGGACTTACC+GGG | - | chr6.4:62269974-62269993 | None:intergenic | 35.0% |
| !! | AACCATTGATAACGATATCC+CGG | + | chr6.4:62269953-62269972 | MS.gene030334:CDS | 35.0% |
| !! | ACAACACTGATTCATTATGC+AGG | + | chr6.4:62270888-62270907 | MS.gene030334:intron | 35.0% |
| !! | ACATTGTCAGAAGCATTACT+TGG | - | chr6.4:62271526-62271545 | None:intergenic | 35.0% |
| !! | ATTCTTTCAGTATCGATTGC+TGG | - | chr6.4:62271451-62271470 | None:intergenic | 35.0% |
| !! | CTTTTGGCTAACTCATGTTT+TGG | + | chr6.4:62272063-62272082 | MS.gene030334:intron | 35.0% |
| !! | TGAAGGCATTATAAACACCT+AGG | - | chr6.4:62270237-62270256 | None:intergenic | 35.0% |
| !!! | AAATCAACCTAGTTTTGTGG+AGG | + | chr6.4:62272169-62272188 | MS.gene030334:CDS | 35.0% |
| !!! | CCTTTTGAAATTGGTCATTC+AGG | + | chr6.4:62269203-62269222 | MS.gene030334:intron | 35.0% |
| !!! | TAATTTAGCGGTTCGGTTTT+TGG | + | chr6.4:62271952-62271971 | MS.gene030334:intron | 35.0% |
| !!! | TTCGCCTTTTTTGTCTTCAT+CGG | - | chr6.4:62272204-62272223 | None:intergenic | 35.0% |
| AACAAGAGGAAGAAAATGGC+TGG | + | chr6.4:62270671-62270690 | MS.gene030334:intron | 40.0% | |
| AAGCATTACTTGGAACAGCT+CGG | - | chr6.4:62271516-62271535 | None:intergenic | 40.0% | |
| AATAACATACACAAGCGTGG+AGG | + | chr6.4:62269511-62269530 | MS.gene030334:CDS | 40.0% | |
| ACAAGAGGAAGAAAATGGCT+GGG | + | chr6.4:62270672-62270691 | MS.gene030334:intron | 40.0% | |
| ACCGAACTATTGTAACGGTT+CGG | - | chr6.4:62271745-62271764 | None:intergenic | 40.0% | |
| CAAGCTGCAATTGTTACATG+TGG | + | chr6.4:62269249-62269268 | MS.gene030334:CDS | 40.0% | |
| CACTTTACAACTGAGTAAGC+AGG | - | chr6.4:62268504-62268523 | None:intergenic | 40.0% | |
| CTGCAATTGTTACATGTGGA+GGG | + | chr6.4:62269253-62269272 | MS.gene030334:CDS | 40.0% | |
| GATAGAAGGCTCAAGGAAAA+TGG | + | chr6.4:62271017-62271036 | MS.gene030334:CDS | 40.0% | |
| GATGAAATCAGCCGCAATTT+GGG | + | chr6.4:62272275-62272294 | MS.gene030334:CDS | 40.0% | |
| GGAATGTAATCAGACAAGTG+AGG | - | chr6.4:62267993-62268012 | None:intergenic | 40.0% | |
| GGTTGTCTTGCAAAGGATTA+GGG | - | chr6.4:62268482-62268501 | None:intergenic | 40.0% | |
| GTTCACAAAGATAGTCCAAG+GGG | + | chr6.4:62269073-62269092 | MS.gene030334:CDS | 40.0% | |
| GTTGACAGTATTCAAGATCG+TGG | + | chr6.4:62269580-62269599 | MS.gene030334:CDS | 40.0% | |
| TACCGGGATATCGTTATCAA+TGG | - | chr6.4:62269958-62269977 | None:intergenic | 40.0% | |
| TATATATGCGGTACACCCAA+AGG | + | chr6.4:62270564-62270583 | MS.gene030334:intron | 40.0% | |
| TATCGATACAGGAAGTCAGA+AGG | + | chr6.4:62269895-62269914 | MS.gene030334:intron | 40.0% | |
| TCAAGATCGTGGAATCAATC+AGG | + | chr6.4:62269591-62269610 | MS.gene030334:CDS | 40.0% | |
| TCATTGGACGAATTACCAGA+TGG | + | chr6.4:62272227-62272246 | MS.gene030334:CDS | 40.0% | |
| TCCGAACCGTTACAATAGTT+CGG | + | chr6.4:62271741-62271760 | MS.gene030334:intron | 40.0% | |
| TCGAGCAGAATTGAACTGTT+AGG | + | chr6.4:62271795-62271814 | MS.gene030334:intron | 40.0% | |
| TCTTCAAGTACATAACCAGC+AGG | - | chr6.4:62267966-62267985 | None:intergenic | 40.0% | |
| TCTTCTGAACAATGTCCATC+TGG | - | chr6.4:62272245-62272264 | None:intergenic | 40.0% | |
| TGAGTTAAACTGAACGTTCG+AGG | + | chr6.4:62271891-62271910 | MS.gene030334:intron | 40.0% | |
| TGATGAAATCAGCCGCAATT+TGG | + | chr6.4:62272274-62272293 | MS.gene030334:CDS | 40.0% | |
| TTCTTCAAGATGTTGGGCTA+TGG | + | chr6.4:62271135-62271154 | MS.gene030334:CDS | 40.0% | |
| TTGGCCTAAAGCGGATATAA+CGG | + | chr6.4:62270295-62270314 | MS.gene030334:intron | 40.0% | |
| ! | CACTCCTAGATACCATTTTC+AGG | + | chr6.4:62271985-62272004 | MS.gene030334:intron | 40.0% |
| ! | GAATTAGGTCCTCTTGCTTT+TGG | - | chr6.4:62270631-62270650 | None:intergenic | 40.0% |
| ! | GTGTAATTATGTGTCGGTGT+CGG | - | chr6.4:62268900-62268919 | None:intergenic | 40.0% |
| ! | TACACAAGTGGACTTGTCAA+TGG | + | chr6.4:62271604-62271623 | MS.gene030334:CDS | 40.0% |
| ! | TACCTTCAATTGGCCTAAAG+CGG | + | chr6.4:62270286-62270305 | MS.gene030334:intron | 40.0% |
| ! | TGAGTCTAGTTCCATTGAAG+TGG | + | chr6.4:62269846-62269865 | MS.gene030334:intron | 40.0% |
| ! | TGTTGACTGTTGCTTGATTC+CGG | + | chr6.4:62270947-62270966 | MS.gene030334:CDS | 40.0% |
| !! | AAGATAGCGGAAAATTGGCA+CGG | - | chr6.4:62271275-62271294 | None:intergenic | 40.0% |
| !! | ACGGTAGTCATTTTCACCTT+TGG | - | chr6.4:62270583-62270602 | None:intergenic | 40.0% |
| !! | CCAAAAGAGTACCATTCTTG+CGG | - | chr6.4:62272050-62272069 | None:intergenic | 40.0% |
| !! | CGGTAGTCATTTTCACCTTT+GGG | - | chr6.4:62270582-62270601 | None:intergenic | 40.0% |
| !! | TCGGCTCTAGGAATAAAAAG+AGG | + | chr6.4:62270431-62270450 | MS.gene030334:intron | 40.0% |
| !!! | TCTTGCTTTTGGTGTTAGGT+GGG | - | chr6.4:62270620-62270639 | None:intergenic | 40.0% |
| AACGCCGTTATATCCGCTTT+AGG | - | chr6.4:62270302-62270321 | None:intergenic | 45.0% | |
| AAGAGGAAGAAAATGGCTGG+GGG | + | chr6.4:62270674-62270693 | MS.gene030334:intron | 45.0% | |
| AAGGCGTGGTCTCAAATGTT+CGG | + | chr6.4:62269914-62269933 | MS.gene030334:CDS | 45.0% | |
| AAGGTTATTACTGGTCCTGC+TGG | + | chr6.4:62267948-62267967 | MS.gene030334:CDS | 45.0% | |
| ACAGCTCGGATCATATAGGT+TGG | - | chr6.4:62271502-62271521 | None:intergenic | 45.0% | |
| AGAGAGAGAGAGAGACATAC+TGG | - | chr6.4:62268023-62268042 | None:intergenic | 45.0% | |
| ATGGTCATCGTGATTGCTGA+AGG | + | chr6.4:62271044-62271063 | MS.gene030334:CDS | 45.0% | |
| CAAGAGGAAGAAAATGGCTG+GGG | + | chr6.4:62270673-62270692 | MS.gene030334:intron | 45.0% | |
| CACCTAACACCAAAAGCAAG+AGG | + | chr6.4:62270619-62270638 | MS.gene030334:intron | 45.0% | |
| CGAAAACATACCTTCTGACG+TGG | - | chr6.4:62269121-62269140 | None:intergenic | 45.0% | |
| CTGGACTCAACACTGTGATA+CGG | + | chr6.4:62269283-62269302 | MS.gene030334:CDS | 45.0% | |
| CTTTGACACTGCTGTTGAAG+AGG | + | chr6.4:62270116-62270135 | MS.gene030334:CDS | 45.0% | |
| GACTTGACCTCCACAAAACT+AGG | - | chr6.4:62272179-62272198 | None:intergenic | 45.0% | |
| GAGAGACATACTGGAAGATC+AGG | - | chr6.4:62268014-62268033 | None:intergenic | 45.0% | |
| GAGCTAAGCATCCCAAATTG+CGG | - | chr6.4:62272289-62272308 | None:intergenic | 45.0% | |
| GAGGAACTGTGTCATCAACA+TGG | - | chr6.4:62268639-62268658 | None:intergenic | 45.0% | |
| GATACAGCGGTAAGTTTCCT+AGG | + | chr6.4:62270217-62270236 | MS.gene030334:intron | 45.0% | |
| GCAAACAGCTCAACAGAACT+GGG | - | chr6.4:62270775-62270794 | None:intergenic | 45.0% | |
| GCACATATACGGACACGATA+AGG | - | chr6.4:62268964-62268983 | None:intergenic | 45.0% | |
| GCAGGACCAGTAATAACCTT+AGG | - | chr6.4:62267948-62267967 | None:intergenic | 45.0% | |
| GCTCAAGGAAAATGGTCACA+TGG | + | chr6.4:62271025-62271044 | MS.gene030334:CDS | 45.0% | |
| GCTGCAATTGTTACATGTGG+AGG | + | chr6.4:62269252-62269271 | MS.gene030334:CDS | 45.0% | |
| GGGTTGTCTTGCAAAGGATT+AGG | - | chr6.4:62268483-62268502 | None:intergenic | 45.0% | |
| GGTCTCAAATGTTCGGTTGT+AGG | + | chr6.4:62269921-62269940 | MS.gene030334:CDS | 45.0% | |
| GTGTTGTCAATTGCAGATCG+CGG | - | chr6.4:62270875-62270894 | None:intergenic | 45.0% | |
| TAACTGATAGAATGTGGGCG+AGG | + | chr6.4:62272132-62272151 | MS.gene030334:CDS | 45.0% | |
| TAAGCAGGGTTGTCTTGCAA+AGG | - | chr6.4:62268489-62268508 | None:intergenic | 45.0% | |
| TATGAAGCACAGACACTCCT+CGG | + | chr6.4:62268856-62268875 | MS.gene030334:intron | 45.0% | |
| TCTCTCTGGCAAAATGATCC+TGG | - | chr6.4:62271349-62271368 | None:intergenic | 45.0% | |
| TCTGCAATCTGGCAAGAAAC+AGG | + | chr6.4:62271094-62271113 | MS.gene030334:CDS | 45.0% | |
| TGATGACACAGTTCCTCAGA+AGG | + | chr6.4:62268642-62268661 | MS.gene030334:CDS | 45.0% | |
| TGCAAACAGCTCAACAGAAC+TGG | - | chr6.4:62270776-62270795 | None:intergenic | 45.0% | |
| TGGAACAGCTCGGATCATAT+AGG | - | chr6.4:62271506-62271525 | None:intergenic | 45.0% | |
| TGGACTCAACACTGTGATAC+GGG | + | chr6.4:62269284-62269303 | MS.gene030334:CDS | 45.0% | |
| ! | AAGTGCTGTTCATGGAGCAA+TGG | + | chr6.4:62271567-62271586 | MS.gene030334:CDS | 45.0% |
| ! | ATCCGCTTTAGGCCAATTGA+AGG | - | chr6.4:62270291-62270310 | None:intergenic | 45.0% |
| ! | CCGCAAGAATGGTACTCTTT+TGG | + | chr6.4:62272047-62272066 | MS.gene030334:intron | 45.0% |
| ! | GGGTGCATCTGTAATTTTCG+AGG | + | chr6.4:62269724-62269743 | MS.gene030334:CDS | 45.0% |
| !! | AGGGTGTCCCTACTTGTTAT+TGG | - | chr6.4:62268734-62268753 | None:intergenic | 45.0% |
| !! | ATCGGTGTTGTCAAGCTGAT+GGG | + | chr6.4:62270192-62270211 | MS.gene030334:CDS | 45.0% |
| !! | CTTGCTCAAAGTGCTGTTCA+TGG | + | chr6.4:62271559-62271578 | MS.gene030334:CDS | 45.0% |
| !! | TATCGGTGTTGTCAAGCTGA+TGG | + | chr6.4:62270191-62270210 | MS.gene030334:CDS | 45.0% |
| !!! | CTCTTGCTTTTGGTGTTAGG+TGG | - | chr6.4:62270621-62270640 | None:intergenic | 45.0% |
| !!! | CTTGCTTTTGGTGTTAGGTG+GGG | - | chr6.4:62270619-62270638 | None:intergenic | 45.0% |
| !!! | GTCCTCTTGCTTTTGGTGTT+AGG | - | chr6.4:62270624-62270643 | None:intergenic | 45.0% |
| !!! | TTGCTTTTGGTGTTAGGTGG+GGG | - | chr6.4:62270618-62270637 | None:intergenic | 45.0% |
| !! | ATATTAAAAAAAAAAAATTG+AGG | + | chr6.4:62270732-62270751 | MS.gene030334:intron | 5.0% |
| !! | ATTATTATTATTAATTATGT+TGG | + | chr6.4:62268176-62268195 | MS.gene030334:intron | 5.0% |
| !!! | ATAAATTTTTCTATTTTTTT+GGG | + | chr6.4:62268285-62268304 | MS.gene030334:intron | 5.0% |
| !!! | TATAAATTTTTCTATTTTTT+TGG | + | chr6.4:62268284-62268303 | MS.gene030334:intron | 5.0% |
| !!! | TTTTTTAAAAGATAAATATA+AGG | + | chr6.4:62270536-62270555 | MS.gene030334:intron | 5.0% |
| AAAATTGAGGCCCATGGCTG+AGG | + | chr6.4:62270745-62270764 | MS.gene030334:intron | 50.0% | |
| AAATTGAGGCCCATGGCTGA+GGG | + | chr6.4:62270746-62270765 | MS.gene030334:intron | 50.0% | |
| AAGCGTGGAGGAACTATCCT+TGG | + | chr6.4:62269523-62269542 | MS.gene030334:CDS | 50.0% | |
| ACTATCCTTGGTACTTCGCG+AGG | + | chr6.4:62269535-62269554 | MS.gene030334:CDS | 50.0% | |
| AGCCTCCGAATTCTTAGGGA+CGG | - | chr6.4:62270412-62270431 | None:intergenic | 50.0% | |
| ATAACGGCGTTATAGTGCCG+CGG | + | chr6.4:62270311-62270330 | MS.gene030334:intron | 50.0% | |
| ATACAGGAAGTCAGAAGGCG+TGG | + | chr6.4:62269900-62269919 | MS.gene030334:intron | 50.0% | |
| ATCGTGATTGCTGAAGGAGC+GGG | + | chr6.4:62271050-62271069 | MS.gene030334:CDS | 50.0% | |
| CATCGTGATTGCTGAAGGAG+CGG | + | chr6.4:62271049-62271068 | MS.gene030334:CDS | 50.0% | |
| CCAGGACCTTCGAGGTAAAA+CGG | - | chr6.4:62270978-62270997 | None:intergenic | 50.0% | |
| CTCGAGTCACGCCATACATA+TGG | - | chr6.4:62269329-62269348 | None:intergenic | 50.0% | |
| CTTACCGAGAGTCTGCAATC+TGG | + | chr6.4:62271083-62271102 | MS.gene030334:CDS | 50.0% | |
| CTTGCCAGATTGCAGACTCT+CGG | - | chr6.4:62271090-62271109 | None:intergenic | 50.0% | |
| GACACAGTTCCTCAGAAGGT+TGG | + | chr6.4:62268646-62268665 | MS.gene030334:intron | 50.0% | |
| GACTCGAGTTCTTGGAATCG+AGG | + | chr6.4:62269341-62269360 | MS.gene030334:CDS | 50.0% | |
| GGCAAGAAACAGGATGCTTC+TGG | + | chr6.4:62271104-62271123 | MS.gene030334:CDS | 50.0% | |
| GTGGGGGTTCCTCATGTATA+CGG | - | chr6.4:62270602-62270621 | None:intergenic | 50.0% | |
| TATGGCGTGACTCGAGTTCT+TGG | + | chr6.4:62269333-62269352 | MS.gene030334:CDS | 50.0% | |
| TCAAGTAGCGGCTATAGCCA+GGG | + | chr6.4:62270386-62270405 | MS.gene030334:intron | 50.0% | |
| TCCCTAAGAATTCGGAGGCT+CGG | + | chr6.4:62270412-62270431 | MS.gene030334:intron | 50.0% | |
| TGGAGGAGATGGAACTCAGA+GGG | + | chr6.4:62269703-62269722 | MS.gene030334:CDS | 50.0% | |
| TTGGAGGAGATGGAACTCAG+AGG | + | chr6.4:62269702-62269721 | MS.gene030334:CDS | 50.0% | |
| ! | AAGCTGATGGGTCGATACAG+CGG | + | chr6.4:62270204-62270223 | MS.gene030334:CDS | 50.0% |
| ! | CGTATCACAGTGTTGAGTCC+AGG | - | chr6.4:62269285-62269304 | None:intergenic | 50.0% |
| ! | GGTTACACTGGCTACACAAG+TGG | + | chr6.4:62271592-62271611 | MS.gene030334:CDS | 50.0% |
| ! | GTCCAAGGGGAGTACATTTC+CGG | + | chr6.4:62269086-62269105 | MS.gene030334:CDS | 50.0% |
| ! | TTTTACCTCGAAGGTCCTGG+TGG | + | chr6.4:62270978-62270997 | MS.gene030334:CDS | 50.0% |
| !! | GAGGAGTGTCTGTGCTTCAT+AGG | - | chr6.4:62268857-62268876 | None:intergenic | 50.0% |
| AATGGGCAGCGTCTTCTCTC+TGG | - | chr6.4:62271363-62271382 | None:intergenic | 55.0% | |
| ACATGTGGAGGGCTATGTCC+TGG | + | chr6.4:62269264-62269283 | MS.gene030334:CDS | 55.0% | |
| AGCCGAGCCTCCGAATTCTT+AGG | - | chr6.4:62270417-62270436 | None:intergenic | 55.0% | |
| ATCCTTGGTACTTCGCGAGG+TGG | + | chr6.4:62269538-62269557 | MS.gene030334:CDS | 55.0% | |
| CAGGGCCGTCCCTAAGAATT+CGG | + | chr6.4:62270404-62270423 | MS.gene030334:intron | 55.0% | |
| GCACAGACACTCCTCGGATT+AGG | + | chr6.4:62268862-62268881 | MS.gene030334:intron | 55.0% | |
| GCCGAGCCTCCGAATTCTTA+GGG | - | chr6.4:62270416-62270435 | None:intergenic | 55.0% | |
| GCTGTTCATGGAGCAATGGC+AGG | + | chr6.4:62271571-62271590 | MS.gene030334:CDS | 55.0% | |
| GGAGCAATGGCAGGTTACAC+TGG | + | chr6.4:62271580-62271599 | MS.gene030334:CDS | 55.0% | |
| GGAGGAGATGGAACTCAGAG+GGG | + | chr6.4:62269704-62269723 | MS.gene030334:CDS | 55.0% | |
| GTCAAGTAGCGGCTATAGCC+AGG | + | chr6.4:62270385-62270404 | MS.gene030334:intron | 55.0% | |
| TCGAGGTAAAACGGCGACTC+CGG | - | chr6.4:62270969-62270988 | None:intergenic | 55.0% | |
| ! | CCGTTTTACCTCGAAGGTCC+TGG | + | chr6.4:62270975-62270994 | MS.gene030334:CDS | 55.0% |
| ! | GCTATAGTGCCGCTATAGCC+AGG | - | chr6.4:62270815-62270834 | None:intergenic | 55.0% |
| !! | GAGTCGCCGTTTTACCTCGA+AGG | + | chr6.4:62270969-62270988 | MS.gene030334:CDS | 55.0% |
| AGAGTCCACCAGGACCTTCG+AGG | - | chr6.4:62270986-62271005 | None:intergenic | 60.0% | |
| CACGAGACACGCCTAATCCG+AGG | - | chr6.4:62268876-62268895 | None:intergenic | 60.0% | |
| CGAATTCTTAGGGACGGCCC+TGG | - | chr6.4:62270406-62270425 | None:intergenic | 60.0% | |
| CGCCGGAAATGTACTCCCCT+TGG | - | chr6.4:62269091-62269110 | None:intergenic | 60.0% | |
| GAATTCGGAGGCTCGGCTCT+AGG | + | chr6.4:62270419-62270438 | MS.gene030334:intron | 60.0% | |
| GAGCTGTTTGCACCCCCTCA+GGG | + | chr6.4:62270784-62270803 | MS.gene030334:intron | 60.0% | |
| GGCCGTCCCTAAGAATTCGG+AGG | + | chr6.4:62270407-62270426 | MS.gene030334:intron | 60.0% | |
| GGGATGCTTAGCTCCGCTTG+CGG | + | chr6.4:62272295-62272314 | MS.gene030334:CDS | 60.0% | |
| TGAGCTGTTTGCACCCCCTC+AGG | + | chr6.4:62270783-62270802 | MS.gene030334:intron | 60.0% | |
| TGCGGTACCAGTCCTGCGTA+CGG | + | chr6.4:62272313-62272332 | MS.gene030334:CDS | 60.0% | |
| ! | GTCCACCTCGCGAAGTACCA+AGG | - | chr6.4:62269543-62269562 | None:intergenic | 60.0% |
| AACTGGGCCTCCCTCAGCCA+TGG | - | chr6.4:62270759-62270778 | None:intergenic | 65.0% | |
| ACTGGGCCTCCCTCAGCCAT+GGG | - | chr6.4:62270758-62270777 | None:intergenic | 65.0% | |
| CTGCGTACGGGCGGGATATC+CGG | + | chr6.4:62272326-62272345 | MS.gene030334:CDS | 65.0% | |
| GCGGTACCAGTCCTGCGTAC+GGG | + | chr6.4:62272314-62272333 | MS.gene030334:CDS | 65.0% | |
| GGAGTACATTTCCGGCGCGC+TGG | + | chr6.4:62269094-62269113 | MS.gene030334:CDS | 65.0% | |
| GTACCAGTCCTGCGTACGGG+CGG | + | chr6.4:62272317-62272336 | MS.gene030334:CDS | 65.0% | |
| TACCAGTCCTGCGTACGGGC+GGG | + | chr6.4:62272318-62272337 | MS.gene030334:CDS | 65.0% | |
| TGTTTGCACCCCCTCAGGGC+CGG | + | chr6.4:62270788-62270807 | MS.gene030334:intron | 65.0% | |
| TTGAGGCCCATGGCTGAGGG+AGG | + | chr6.4:62270749-62270768 | MS.gene030334:intron | 65.0% | |
| ! | AGTGCCGCTATAGCCAGGCC+CGG | - | chr6.4:62270810-62270829 | None:intergenic | 65.0% |
| ! | CGCAGGACTGGTACCGCAAG+CGG | - | chr6.4:62272311-62272330 | None:intergenic | 65.0% |
| AGGGCCGGGCCTGGCTATAG+CGG | + | chr6.4:62270803-62270822 | MS.gene030334:intron | 70.0% | |
| ATAGCCAGGCCCGGCCCTGA+GGG | - | chr6.4:62270801-62270820 | None:intergenic | 70.0% | |
| ATCCCGCCCGTACGCAGGAC+TGG | - | chr6.4:62272323-62272342 | None:intergenic | 70.0% | |
| CGGATATCCCGCCCGTACGC+AGG | - | chr6.4:62272328-62272347 | None:intergenic | 70.0% | |
| GCGCGCTGGACCACGTCAGA+AGG | + | chr6.4:62269108-62269127 | MS.gene030334:CDS | 70.0% | |
| GTTTGCACCCCCTCAGGGCC+GGG | + | chr6.4:62270789-62270808 | MS.gene030334:intron | 70.0% | |
| TATAGCCAGGCCCGGCCCTG+AGG | - | chr6.4:62270802-62270821 | None:intergenic | 70.0% | |
| TCTGACGTGGTCCAGCGCGC+CGG | - | chr6.4:62269108-62269127 | None:intergenic | 70.0% | |
| TAGCCAGGCCCGGCCCTGAG+GGG | - | chr6.4:62270800-62270819 | None:intergenic | 75.0% | |
| ! | AGCCAGGCCCGGCCCTGAGG+GGG | - | chr6.4:62270799-62270818 | None:intergenic | 80.0% |
| ! | CACCCCCTCAGGGCCGGGCC+TGG | + | chr6.4:62270794-62270813 | MS.gene030334:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 62267930 | 62272355 | 62267930 | ID=MS.gene030334 |
| chr6.4 | mRNA | 62267930 | 62272355 | 62267930 | ID=MS.gene030334.t1;Parent=MS.gene030334 |
| chr6.4 | exon | 62267930 | 62268022 | 62267930 | ID=MS.gene030334.t1.exon1;Parent=MS.gene030334.t1 |
| chr6.4 | CDS | 62267930 | 62268022 | 62267930 | ID=cds.MS.gene030334.t1;Parent=MS.gene030334.t1 |
| chr6.4 | exon | 62268474 | 62268520 | 62268474 | ID=MS.gene030334.t1.exon2;Parent=MS.gene030334.t1 |
| chr6.4 | CDS | 62268474 | 62268520 | 62268474 | ID=cds.MS.gene030334.t1;Parent=MS.gene030334.t1 |
| chr6.4 | exon | 62268624 | 62268663 | 62268624 | ID=MS.gene030334.t1.exon3;Parent=MS.gene030334.t1 |
| chr6.4 | CDS | 62268624 | 62268663 | 62268624 | ID=cds.MS.gene030334.t1;Parent=MS.gene030334.t1 |
| chr6.4 | exon | 62269067 | 62269129 | 62269067 | ID=MS.gene030334.t1.exon4;Parent=MS.gene030334.t1 |
| chr6.4 | CDS | 62269067 | 62269129 | 62269067 | ID=cds.MS.gene030334.t1;Parent=MS.gene030334.t1 |
| chr6.4 | exon | 62269225 | 62269362 | 62269225 | ID=MS.gene030334.t1.exon5;Parent=MS.gene030334.t1 |
| chr6.4 | CDS | 62269225 | 62269362 | 62269225 | ID=cds.MS.gene030334.t1;Parent=MS.gene030334.t1 |
| chr6.4 | exon | 62269454 | 62269612 | 62269454 | ID=MS.gene030334.t1.exon6;Parent=MS.gene030334.t1 |
| chr6.4 | CDS | 62269454 | 62269612 | 62269454 | ID=cds.MS.gene030334.t1;Parent=MS.gene030334.t1 |
| chr6.4 | exon | 62269692 | 62269745 | 62269692 | ID=MS.gene030334.t1.exon7;Parent=MS.gene030334.t1 |
| chr6.4 | CDS | 62269692 | 62269745 | 62269692 | ID=cds.MS.gene030334.t1;Parent=MS.gene030334.t1 |
| chr6.4 | exon | 62269906 | 62269974 | 62269906 | ID=MS.gene030334.t1.exon8;Parent=MS.gene030334.t1 |
| chr6.4 | CDS | 62269906 | 62269974 | 62269906 | ID=cds.MS.gene030334.t1;Parent=MS.gene030334.t1 |
| chr6.4 | exon | 62270096 | 62270225 | 62270096 | ID=MS.gene030334.t1.exon9;Parent=MS.gene030334.t1 |
| chr6.4 | CDS | 62270096 | 62270225 | 62270096 | ID=cds.MS.gene030334.t1;Parent=MS.gene030334.t1 |
| chr6.4 | exon | 62270910 | 62271175 | 62270910 | ID=MS.gene030334.t1.exon10;Parent=MS.gene030334.t1 |
| chr6.4 | CDS | 62270910 | 62271175 | 62270910 | ID=cds.MS.gene030334.t1;Parent=MS.gene030334.t1 |
| chr6.4 | exon | 62271350 | 62271398 | 62271350 | ID=MS.gene030334.t1.exon11;Parent=MS.gene030334.t1 |
| chr6.4 | CDS | 62271350 | 62271398 | 62271350 | ID=cds.MS.gene030334.t1;Parent=MS.gene030334.t1 |
| chr6.4 | exon | 62271497 | 62271651 | 62271497 | ID=MS.gene030334.t1.exon12;Parent=MS.gene030334.t1 |
| chr6.4 | CDS | 62271497 | 62271651 | 62271497 | ID=cds.MS.gene030334.t1;Parent=MS.gene030334.t1 |
| chr6.4 | exon | 62272101 | 62272355 | 62272101 | ID=MS.gene030334.t1.exon13;Parent=MS.gene030334.t1 |
| chr6.4 | CDS | 62272101 | 62272355 | 62272101 | ID=cds.MS.gene030334.t1;Parent=MS.gene030334.t1 |
| Gene Sequence |
| Protein sequence |
