Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030571.t1 | XP_003630362.1 | 95.3 | 645 | 25 | 2 | 1 | 645 | 1 | 640 | 1.10E-253 | 885.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030571.t1 | Q9MA92 | 48.4 | 415 | 175 | 6 | 1 | 415 | 1 | 376 | 5.4e-84 | 313.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030571.t1 | G7LFP4 | 95.3 | 645 | 25 | 2 | 1 | 645 | 1 | 640 | 7.8e-254 | 885.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030571 | MS.gene01143 | PPI |
| MS.gene01826 | MS.gene030571 | PPI |
| MS.gene002867 | MS.gene030571 | PPI |
| MS.gene030571 | MS.gene002176 | PPI |
| MS.gene030571 | MS.gene026637 | PPI |
| MS.gene030571 | MS.gene026126 | PPI |
| MS.gene030571 | MS.gene047900 | PPI |
| MS.gene030571 | MS.gene002864 | PPI |
| MS.gene030571 | MS.gene00893 | PPI |
| MS.gene030571 | MS.gene00896 | PPI |
| MS.gene030571 | MS.gene047901 | PPI |
| MS.gene030571 | MS.gene75229 | PPI |
| MS.gene030571 | MS.gene63019 | PPI |
| MS.gene030571 | MS.gene071947 | PPI |
| MS.gene030571 | MS.gene047904 | PPI |
| MS.gene030571 | MS.gene047083 | PPI |
| MS.gene030571 | MS.gene93193 | PPI |
| MS.gene030571 | MS.gene002865 | PPI |
| MS.gene030571 | MS.gene99533 | PPI |
| MS.gene030571 | MS.gene002174 | PPI |
| MS.gene01146 | MS.gene030571 | PPI |
| MS.gene33602 | MS.gene030571 | PPI |
| MS.gene030571 | MS.gene84485 | PPI |
| MS.gene071949 | MS.gene030571 | PPI |
| MS.gene030571 | MS.gene00895 | PPI |
| MS.gene030571 | MS.gene01827 | PPI |
| MS.gene030571 | MS.gene01838 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030571.t1 | MTR_8g094760 | 96.124 | 645 | 20 | 2 | 1 | 645 | 1 | 640 | 0.0 | 1240 |
| MS.gene030571.t1 | MTR_8g094760 | 95.895 | 609 | 20 | 2 | 37 | 645 | 25 | 628 | 0.0 | 1165 |
| MS.gene030571.t1 | MTR_3g096990 | 60.737 | 624 | 203 | 6 | 34 | 636 | 27 | 629 | 0.0 | 677 |
| MS.gene030571.t1 | MTR_3g096990 | 61.024 | 508 | 154 | 5 | 34 | 523 | 27 | 508 | 0.0 | 536 |
| MS.gene030571.t1 | MTR_3g096990 | 56.371 | 259 | 106 | 3 | 384 | 636 | 466 | 723 | 1.84e-77 | 261 |
| MS.gene030571.t1 | MTR_1g030010 | 46.053 | 456 | 210 | 4 | 73 | 513 | 145 | 579 | 2.91e-110 | 351 |
| MS.gene030571.t1 | MTR_1g030010 | 35.981 | 214 | 76 | 6 | 467 | 643 | 638 | 827 | 2.82e-20 | 95.9 |
| MS.gene030571.t1 | MTR_3g113290 | 38.750 | 320 | 147 | 6 | 1 | 273 | 1 | 318 | 4.14e-43 | 167 |
| MS.gene030571.t1 | MTR_1g024095 | 37.954 | 303 | 154 | 6 | 1 | 273 | 1 | 299 | 1.61e-39 | 156 |
| MS.gene030571.t1 | MTR_1g024095 | 37.954 | 303 | 154 | 6 | 1 | 273 | 1 | 299 | 1.62e-39 | 156 |
| MS.gene030571.t1 | MTR_5g021810 | 35.410 | 305 | 160 | 6 | 1 | 273 | 1 | 300 | 8.24e-39 | 153 |
| MS.gene030571.t1 | MTR_5g021810 | 35.390 | 308 | 155 | 6 | 1 | 273 | 1 | 299 | 1.83e-38 | 152 |
| MS.gene030571.t1 | MTR_4g094848 | 36.735 | 294 | 118 | 7 | 1 | 265 | 1 | 255 | 1.03e-35 | 144 |
| MS.gene030571.t1 | MTR_5g016830 | 33.247 | 385 | 183 | 12 | 1 | 357 | 1 | 339 | 1.47e-34 | 140 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030571.t1 | AT3G05270 | 42.530 | 656 | 260 | 10 | 1 | 580 | 1 | 615 | 1.64e-137 | 416 |
| MS.gene030571.t1 | AT3G05270 | 42.530 | 656 | 260 | 10 | 1 | 580 | 1 | 615 | 1.64e-137 | 416 |
| MS.gene030571.t1 | AT3G05270 | 42.530 | 656 | 260 | 10 | 1 | 580 | 1 | 615 | 1.64e-137 | 416 |
| MS.gene030571.t1 | AT1G21810 | 37.345 | 565 | 253 | 14 | 86 | 584 | 13 | 542 | 4.47e-78 | 261 |
| MS.gene030571.t1 | AT1G21810 | 28.826 | 281 | 136 | 8 | 386 | 640 | 381 | 623 | 5.54e-13 | 72.4 |
| MS.gene030571.t1 | AT1G21810 | 37.345 | 565 | 253 | 14 | 86 | 584 | 13 | 542 | 4.47e-78 | 261 |
| MS.gene030571.t1 | AT1G21810 | 28.826 | 281 | 136 | 8 | 386 | 640 | 381 | 623 | 5.54e-13 | 72.4 |
| MS.gene030571.t1 | AT1G77580 | 47.500 | 320 | 134 | 5 | 72 | 390 | 28 | 314 | 4.49e-75 | 253 |
| MS.gene030571.t1 | AT1G77580 | 47.500 | 320 | 134 | 5 | 72 | 390 | 28 | 314 | 5.52e-74 | 253 |
| MS.gene030571.t1 | AT1G77580 | 32.168 | 286 | 139 | 6 | 380 | 639 | 482 | 738 | 9.88e-20 | 94.4 |
| MS.gene030571.t1 | AT1G77580 | 47.500 | 320 | 134 | 5 | 72 | 390 | 62 | 348 | 8.92e-74 | 253 |
| MS.gene030571.t1 | AT1G77580 | 32.168 | 286 | 139 | 6 | 380 | 639 | 516 | 772 | 9.13e-20 | 94.4 |
| MS.gene030571.t1 | AT1G77580 | 47.500 | 320 | 134 | 5 | 72 | 390 | 62 | 348 | 8.92e-74 | 253 |
| MS.gene030571.t1 | AT1G77580 | 32.168 | 286 | 139 | 6 | 380 | 639 | 516 | 772 | 9.13e-20 | 94.4 |
| MS.gene030571.t1 | AT1G19835 | 38.000 | 300 | 148 | 5 | 1 | 273 | 1 | 289 | 1.40e-45 | 174 |
| MS.gene030571.t1 | AT1G19835 | 38.000 | 300 | 148 | 5 | 1 | 273 | 1 | 289 | 1.40e-45 | 174 |
| MS.gene030571.t1 | AT1G19835 | 38.000 | 300 | 148 | 5 | 1 | 273 | 1 | 289 | 1.40e-45 | 174 |
| MS.gene030571.t1 | AT1G19835 | 38.000 | 300 | 148 | 5 | 1 | 273 | 1 | 289 | 1.40e-45 | 174 |
| MS.gene030571.t1 | AT1G19835 | 38.000 | 300 | 148 | 5 | 1 | 273 | 1 | 289 | 1.40e-45 | 174 |
| MS.gene030571.t1 | AT1G19835 | 38.000 | 300 | 148 | 5 | 1 | 273 | 1 | 289 | 1.40e-45 | 174 |
| MS.gene030571.t1 | AT1G21810 | 33.411 | 431 | 209 | 11 | 218 | 584 | 3 | 419 | 1.07e-40 | 155 |
| MS.gene030571.t1 | AT1G21810 | 28.826 | 281 | 136 | 8 | 386 | 640 | 258 | 500 | 4.64e-13 | 72.4 |
| MS.gene030571.t1 | AT1G47900 | 33.333 | 342 | 160 | 6 | 1 | 275 | 1 | 341 | 8.53e-38 | 151 |
| MS.gene030571.t1 | AT1G47900 | 33.333 | 342 | 160 | 6 | 1 | 275 | 1 | 341 | 8.86e-38 | 151 |
| MS.gene030571.t1 | AT1G47900 | 33.333 | 342 | 160 | 6 | 1 | 275 | 1 | 341 | 8.86e-38 | 151 |
| MS.gene030571.t1 | AT4G36120 | 36.545 | 301 | 161 | 4 | 1 | 273 | 1 | 299 | 2.06e-37 | 150 |
| MS.gene030571.t1 | AT4G36120 | 36.545 | 301 | 161 | 4 | 1 | 273 | 1 | 299 | 2.06e-37 | 150 |
| MS.gene030571.t1 | AT2G23360 | 31.757 | 296 | 135 | 9 | 1 | 273 | 1 | 252 | 1.07e-21 | 100 |
Find 106 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTATCTCCTTCTTTGTTT+TGG | 0.200345 | 4.2:-8330118 | None:intergenic |
| CTGCTCACACTCTTGCTTCT+TGG | 0.211444 | 4.2:-8331141 | None:intergenic |
| TCTCTCAAGTTCGAATCTTC+TGG | 0.215588 | 4.2:-8329257 | None:intergenic |
| AACAGCTAGTAAGCAAAATT+TGG | 0.251696 | 4.2:+8329471 | MS.gene030571:CDS |
| CTGCTTTACCATGTCTTCTT+TGG | 0.253352 | 4.2:-8328546 | None:intergenic |
| TTCAAGCTTAGCAACCTTCT+TGG | 0.263795 | 4.2:-8329500 | None:intergenic |
| CGGCTTCCACTTTCTGTATC+TGG | 0.277252 | 4.2:-8329811 | None:intergenic |
| TGAGTTTATTGAATCTCTTT+TGG | 0.286597 | 4.2:-8331073 | None:intergenic |
| GGAAAAGAAGCTGGAGAAAA+TGG | 0.291680 | 4.2:+8329930 | MS.gene030571:CDS |
| CTGATTTCTCGAGCTGCATT+TGG | 0.306496 | 4.2:-8329993 | None:intergenic |
| AGTGGAAGCCGTTATGTTAA+TGG | 0.328560 | 4.2:+8329823 | MS.gene030571:CDS |
| ATTCTTGAATTGATCAAATT+CGG | 0.336313 | 4.2:-8329698 | None:intergenic |
| GAGAAAAGCCGTAATGGATT+TGG | 0.355781 | 4.2:+8331108 | MS.gene030571:CDS |
| GACTTGAGGAACTAGAATTC+AGG | 0.356240 | 4.2:+8329413 | MS.gene030571:CDS |
| GGTGTACTAACTTCTTCAAT+TGG | 0.366789 | 4.2:-8328446 | None:intergenic |
| CCAGGCGAGACGGAGAGTTC+AGG | 0.368157 | 4.2:+8327619 | MS.gene030571:CDS |
| CATTTAATGTGAATGATAAT+AGG | 0.372447 | 4.2:+8329560 | MS.gene030571:CDS |
| GATTGAAAAGAATGCCGAAT+TGG | 0.383971 | 4.2:+8329909 | MS.gene030571:CDS |
| AGGTACAATGGAAGCTGAAA+TGG | 0.392441 | 4.2:+8329879 | MS.gene030571:CDS |
| CCTGAACTCTCCGTCTCGCC+TGG | 0.392760 | 4.2:-8327619 | None:intergenic |
| GCTCTTGCACTTCTCTGGCT+TGG | 0.397210 | 4.2:-8329189 | None:intergenic |
| ACACAACAAAGTCCCCAAAA+AGG | 0.401435 | 4.2:+8331009 | MS.gene030571:CDS |
| GAATCTCTTCCTCCAATGAA+TGG | 0.402374 | 4.2:-8330194 | None:intergenic |
| TACTAGCTGTTTCAGCAGCT+TGG | 0.405239 | 4.2:-8329459 | None:intergenic |
| GGTGACTAACTCGGTCTTCA+AGG | 0.409043 | 4.2:-8329129 | None:intergenic |
| CGAATTAGCTGCAGCTCTGT+TGG | 0.410377 | 4.2:+8328514 | MS.gene030571:CDS |
| TGAACTTACCAAATCCATTA+CGG | 0.432010 | 4.2:-8331116 | None:intergenic |
| TCGCGATTTGAAGTCAAAAC+AGG | 0.434769 | 4.2:+8330344 | MS.gene030571:CDS |
| TTCAATCAAGAGCAGGAAGT+TGG | 0.455060 | 4.2:+8330245 | MS.gene030571:CDS |
| ATCTGAAATGTTATCTGTAA+AGG | 0.458369 | 4.2:-8329614 | None:intergenic |
| CTAACTTCTTCAATTGGTGC+AGG | 0.462359 | 4.2:-8328440 | None:intergenic |
| ACCGAGTTAGTCACCTTGAT+GGG | 0.462981 | 4.2:+8329137 | MS.gene030571:CDS |
| TGGACAGGAGGAGTTGGTTA+TGG | 0.464689 | 4.2:+8327572 | MS.gene030571:CDS |
| GTTGAAGTCTCTTGCAACAT+TGG | 0.467526 | 4.2:+8330933 | MS.gene030571:CDS |
| CATGGATGATTTCCTTGAGA+TGG | 0.470382 | 4.2:+8329771 | MS.gene030571:CDS |
| GCTGCCTCATACACTCTTTG+AGG | 0.477884 | 4.2:-8329162 | None:intergenic |
| GATAAGAGCAGCAGAATTGA+AGG | 0.478240 | 4.2:+8330023 | MS.gene030571:CDS |
| TGTTAATGGAGGACGAGTAT+TGG | 0.478665 | 4.2:+8329837 | MS.gene030571:CDS |
| GAGACTTGATGCTGTGGAGA+AGG | 0.483646 | 4.2:+8329357 | MS.gene030571:CDS |
| CTGCTTTCCAAGAGATGCAA+TGG | 0.484799 | 4.2:-8330911 | None:intergenic |
| GACCGAGTTAGTCACCTTGA+TGG | 0.485370 | 4.2:+8329136 | MS.gene030571:CDS |
| TGCCGAATTGGAAAAGAAGC+TGG | 0.488229 | 4.2:+8329921 | MS.gene030571:CDS |
| GTTGCTGAAGAAGCTGTCTC+AGG | 0.493553 | 4.2:+8328578 | MS.gene030571:CDS |
| GTATTGGATCAATCTATTGT+TGG | 0.494117 | 4.2:+8329853 | MS.gene030571:CDS |
| AAGTCATCGGAGAAAAGTCC+AGG | 0.496717 | 4.2:+8327601 | MS.gene030571:CDS |
| GGCAAATAACTCACATGACT+CGG | 0.497487 | 4.2:+8329231 | MS.gene030571:CDS |
| GGTGATAGAGTAGCTTGGAT+TGG | 0.502409 | 4.2:-8328401 | None:intergenic |
| CTGCCTCATACACTCTTTGA+GGG | 0.505138 | 4.2:-8329161 | None:intergenic |
| GAAAGAAACCAAAACAAAGA+AGG | 0.505936 | 4.2:+8330110 | MS.gene030571:CDS |
| AGCTCGAGAAATCAGAGAAT+CGG | 0.507513 | 4.2:+8330001 | MS.gene030571:CDS |
| CAAGAAGCAAGAGTGTGAGC+AGG | 0.509068 | 4.2:+8331142 | MS.gene030571:CDS |
| GGGCCCTCAAAGAGTGTATG+AGG | 0.511371 | 4.2:+8329158 | MS.gene030571:CDS |
| AGAATTCAGGATTGCAGAGA+GGG | 0.513958 | 4.2:+8329426 | MS.gene030571:CDS |
| ACTTCACAAGTTAACTCCAT+AGG | 0.515278 | 4.2:-8330985 | None:intergenic |
| AGATAAACTTGATGTAGAGA+TGG | 0.518264 | 4.2:+8329957 | MS.gene030571:CDS |
| CTCAAGTTCAGCAAGATGCC+AGG | 0.522890 | 4.2:+8330298 | MS.gene030571:CDS |
| ATGATTTCCTTGAGATGGAA+AGG | 0.523962 | 4.2:+8329776 | MS.gene030571:CDS |
| ACTCATGAGAAAAGCCGTAA+TGG | 0.524338 | 4.2:+8331102 | MS.gene030571:CDS |
| ATTGGAGGAAGAGATTCAAA+AGG | 0.526916 | 4.2:+8330200 | MS.gene030571:CDS |
| GATAAACTTGATGTAGAGAT+GGG | 0.528053 | 4.2:+8329958 | MS.gene030571:CDS |
| TCAGGACAAAGAACTTGCAT+TGG | 0.528712 | 4.2:+8330858 | MS.gene030571:intron |
| TTCAACTGAGATCAATCTCA+TGG | 0.530613 | 4.2:+8329753 | MS.gene030571:CDS |
| ATCAAGTCTCCTCTGAAGAT+CGG | 0.535787 | 4.2:-8329344 | None:intergenic |
| TTTAAATGGACAGGAGGAGT+TGG | 0.537649 | 4.2:+8327566 | None:intergenic |
| AAGAAGCAAGAGTGTGAGCA+GGG | 0.538699 | 4.2:+8331143 | MS.gene030571:CDS |
| CTCGTCCTCCATTAACATAA+CGG | 0.539926 | 4.2:-8329831 | None:intergenic |
| TTTACAGATAACATTTCAGA+TGG | 0.540438 | 4.2:+8329616 | MS.gene030571:CDS |
| GAGAAAAGTTGCTGAGCTTG+AGG | 0.541808 | 4.2:+8329276 | MS.gene030571:CDS |
| TGATTCAGACAACAGCCCTA+TGG | 0.543080 | 4.2:+8330969 | MS.gene030571:CDS |
| CTTCACAAGTTAACTCCATA+GGG | 0.543569 | 4.2:-8330984 | None:intergenic |
| GCAGGCTTAGATGTGACCTC+TGG | 0.546710 | 4.2:-8328422 | None:intergenic |
| CTGAGAATTCAATCAAGAGC+AGG | 0.555581 | 4.2:+8330238 | MS.gene030571:CDS |
| CAGCAAGCCTTTCCATCTCA+AGG | 0.558005 | 4.2:-8329783 | None:intergenic |
| ACTCTTTGAGGGCCCCATCA+AGG | 0.563213 | 4.2:-8329150 | None:intergenic |
| ACAGATAACATTTCAGATGG+TGG | 0.563408 | 4.2:+8329619 | MS.gene030571:CDS |
| AAATTTGGAGAGCACCAAGA+AGG | 0.563758 | 4.2:+8329486 | MS.gene030571:CDS |
| GATCAATCTATTGTTGGTCA+AGG | 0.566842 | 4.2:+8329859 | MS.gene030571:CDS |
| CCCCATCAAGGTGACTAACT+CGG | 0.567534 | 4.2:-8329138 | None:intergenic |
| CTCAATATAAATTGAAGATG+CGG | 0.569123 | 4.2:-8329590 | None:intergenic |
| AATCAAGAGCAGGAAGTTGG+AGG | 0.569457 | 4.2:+8330248 | MS.gene030571:CDS |
| GCTTTGCCAGATACAGAAAG+TGG | 0.578039 | 4.2:+8329805 | MS.gene030571:CDS |
| GGAGAAAAGTCCAGGCGAGA+CGG | 0.589443 | 4.2:+8327609 | MS.gene030571:CDS |
| TATTGTTGGTCAAGGTACAA+TGG | 0.590943 | 4.2:+8329867 | MS.gene030571:CDS |
| ATCAAGAGCAGGAAGTTGGA+GGG | 0.592927 | 4.2:+8330249 | MS.gene030571:CDS |
| TAGAATTCAGGATTGCAGAG+AGG | 0.594182 | 4.2:+8329425 | MS.gene030571:CDS |
| GCAAATAACTCACATGACTC+GGG | 0.598199 | 4.2:+8329232 | MS.gene030571:CDS |
| TCAGAGGAGACTTGATGCTG+TGG | 0.600308 | 4.2:+8329351 | MS.gene030571:CDS |
| GCTGCAAGACAGAAGAACTC+AGG | 0.602737 | 4.2:+8329106 | MS.gene030571:CDS |
| ACTGAAATTTGCTCAAACTG+AGG | 0.609862 | 4.2:+8330149 | MS.gene030571:CDS |
| GCACTCAGCAAACTTGCTAG+TGG | 0.610257 | 4.2:-8330881 | None:intergenic |
| CTATTCGCTCCGATCTTCAG+AGG | 0.616299 | 4.2:+8329335 | MS.gene030571:CDS |
| CCTCTGGTGATAGAGTAGCT+TGG | 0.616609 | 4.2:-8328406 | None:intergenic |
| GAACATGAGTCAGAACAGCT+TGG | 0.617775 | 4.2:-8329661 | None:intergenic |
| GGCTGTTGTCTGAATCAAGT+AGG | 0.621986 | 4.2:-8330963 | None:intergenic |
| AATTAGTGCCAAAGAAGACA+TGG | 0.626226 | 4.2:+8328538 | MS.gene030571:CDS |
| GCAAAAGATCTATGAAGCTG+TGG | 0.627003 | 4.2:+8329210 | MS.gene030571:CDS |
| GAGTCATGGATTTCAGTCTA+CGG | 0.630257 | 4.2:-8329531 | None:intergenic |
| CTGGGAGAAGGCTGAAAACG+AGG | 0.637297 | 4.2:+8329057 | MS.gene030571:CDS |
| GTTATGGCGGAGAAAGTCAT+CGG | 0.642989 | 4.2:+8327588 | MS.gene030571:CDS |
| GGAAGCCGTTATGTTAATGG+AGG | 0.654516 | 4.2:+8329826 | MS.gene030571:CDS |
| TGAGCTGCAATCTCGACTTG+AGG | 0.664109 | 4.2:+8329399 | MS.gene030571:CDS |
| AGATGCCAGGACTTTGCACA+AGG | 0.664420 | 4.2:+8330311 | MS.gene030571:CDS |
| CCGAGTTAGTCACCTTGATG+GGG | 0.664423 | 4.2:+8329138 | MS.gene030571:CDS |
| ACAGGAGGAGTTGGTTATGG+CGG | 0.665341 | 4.2:+8327575 | MS.gene030571:CDS |
| AAAGAAGCTGGAGAAAATGG+AGG | 0.684854 | 4.2:+8329933 | MS.gene030571:CDS |
| CCAAGCTACTCTATCACCAG+AGG | 0.697015 | 4.2:+8328406 | MS.gene030571:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTGTTTTTCATTTTATTT+AGG | + | chr4.2:8329034-8329053 | MS.gene030571:intron | 15.0% |
| !! | ATCATAATCTTCTAACTTAA+TGG | + | chr4.2:8328971-8328990 | MS.gene030571:intron | 20.0% |
| !! | ATTCTTGAATTGATCAAATT+CGG | - | chr4.2:8329701-8329720 | None:intergenic | 20.0% |
| !! | ATTGCAAAATACATTAAACA+CGG | - | chr4.2:8330409-8330428 | None:intergenic | 20.0% |
| !! | CATTTAATGTGAATGATAAT+AGG | + | chr4.2:8329560-8329579 | MS.gene030571:CDS | 20.0% |
| !! | GAGATGAAAAAAAAAATTGA+GGG | + | chr4.2:8327898-8327917 | MS.gene030571:intron | 20.0% |
| !! | TAATCTACGAATTAAATATC+TGG | - | chr4.2:8328619-8328638 | None:intergenic | 20.0% |
| !! | TCATAATCTTCTAACTTAAT+GGG | + | chr4.2:8328972-8328991 | MS.gene030571:intron | 20.0% |
| !!! | ACCTTCTTCTTTATATTTTT+TGG | - | chr4.2:8328471-8328490 | None:intergenic | 20.0% |
| !!! | ATATCTTTTCATATATACCT+TGG | - | chr4.2:8329015-8329034 | None:intergenic | 20.0% |
| !!! | CAGATACTAAGTTTTTTATA+TGG | - | chr4.2:8330833-8330852 | None:intergenic | 20.0% |
| !!! | CCTTCTTCTTTATATTTTTT+GGG | - | chr4.2:8328470-8328489 | None:intergenic | 20.0% |
| !!! | CTATTTTCATCTATAATAAC+AGG | + | chr4.2:8328078-8328097 | MS.gene030571:intron | 20.0% |
| !!! | TTTTTCATTTTATTTAGGCT+GGG | + | chr4.2:8329039-8329058 | MS.gene030571:intron | 20.0% |
| !!! | TTTTTTTTTTCTAAGCATTC+AGG | + | chr4.2:8328285-8328304 | MS.gene030571:intron | 20.0% |
| ! | AAAATTAATTACAGCTGCAA+AGG | - | chr4.2:8328760-8328779 | None:intergenic | 25.0% |
| ! | AATCAGATTCATCACATTAT+TGG | - | chr4.2:8328344-8328363 | None:intergenic | 25.0% |
| ! | AATGCAATTTAGTTGTAGTT+TGG | - | chr4.2:8330626-8330645 | None:intergenic | 25.0% |
| ! | ACTAAATTGCATTTGTAGTT+TGG | + | chr4.2:8330633-8330652 | MS.gene030571:intron | 25.0% |
| ! | ATTGTTTCAACCAACAAAAA+AGG | - | chr4.2:8330499-8330518 | None:intergenic | 25.0% |
| ! | CCCAAAAAATATAAAGAAGA+AGG | + | chr4.2:8328467-8328486 | MS.gene030571:CDS | 25.0% |
| ! | CTCAATATAAATTGAAGATG+CGG | - | chr4.2:8329593-8329612 | None:intergenic | 25.0% |
| ! | GAATGTGTACTAGATAATAT+GGG | + | chr4.2:8327827-8327846 | MS.gene030571:intron | 25.0% |
| ! | GATTTCAAAAATCCATTCAT+TGG | + | chr4.2:8330182-8330201 | MS.gene030571:CDS | 25.0% |
| ! | GGAGATGAAAAAAAAAATTG+AGG | + | chr4.2:8327897-8327916 | MS.gene030571:intron | 25.0% |
| ! | GTTAAGTAATCATATTGCAT+TGG | + | chr4.2:8330798-8330817 | MS.gene030571:intron | 25.0% |
| ! | TCATAAAAAGTAATGCTAGA+AGG | - | chr4.2:8330443-8330462 | None:intergenic | 25.0% |
| ! | TTCAAGAATAAAAAGACTAC+TGG | + | chr4.2:8329712-8329731 | MS.gene030571:CDS | 25.0% |
| ! | TTGCAAAATACATTAAACAC+GGG | - | chr4.2:8330408-8330427 | None:intergenic | 25.0% |
| ! | TTTACAGATAACATTTCAGA+TGG | + | chr4.2:8329616-8329635 | MS.gene030571:CDS | 25.0% |
| !! | ATCTGAAATGTTATCTGTAA+AGG | - | chr4.2:8329617-8329636 | None:intergenic | 25.0% |
| !! | ATTAAATGTTTTACGAGTCA+TGG | - | chr4.2:8329548-8329567 | None:intergenic | 25.0% |
| !! | ATTTTCTCAAGTGAAAATCT+CGG | + | chr4.2:8327863-8327882 | MS.gene030571:intron | 25.0% |
| !! | GAGTTTATTGAATCTCTTTT+GGG | - | chr4.2:8331075-8331094 | None:intergenic | 25.0% |
| !! | TGAGTTTATTGAATCTCTTT+TGG | - | chr4.2:8331076-8331095 | None:intergenic | 25.0% |
| !!! | AAGAAAGTGTCTTTACTTTA+AGG | + | chr4.2:8327985-8328004 | MS.gene030571:intron | 25.0% |
| !!! | AGAAAGTGTCTTTACTTTAA+GGG | + | chr4.2:8327986-8328005 | MS.gene030571:intron | 25.0% |
| !!! | ATTCTTCAATCCTTTTTTGT+TGG | + | chr4.2:8330486-8330505 | MS.gene030571:intron | 25.0% |
| !!! | GTTTTTCATTTTATTTAGGC+TGG | + | chr4.2:8329038-8329057 | MS.gene030571:intron | 25.0% |
| !!! | TCAGTTTGCTAATACTTATT+TGG | + | chr4.2:8330367-8330386 | MS.gene030571:intron | 25.0% |
| AAAAACTTATCTACCAAACC+AGG | - | chr4.2:8328720-8328739 | None:intergenic | 30.0% | |
| AAAACTTATCTACCAAACCA+GGG | - | chr4.2:8328719-8328738 | None:intergenic | 30.0% | |
| AAACTATCTCAAGTTACAGT+AGG | - | chr4.2:8328130-8328149 | None:intergenic | 30.0% | |
| AACAGCTAGTAAGCAAAATT+TGG | + | chr4.2:8329471-8329490 | MS.gene030571:CDS | 30.0% | |
| AACATACATGCAGTCAAAAA+TGG | - | chr4.2:8327720-8327739 | None:intergenic | 30.0% | |
| AACTATCTCAAGTTACAGTA+GGG | - | chr4.2:8328129-8328148 | None:intergenic | 30.0% | |
| AACTGCTATTACTGGTATTT+AGG | - | chr4.2:8330781-8330800 | None:intergenic | 30.0% | |
| AAGGTAAGAAAAATGAACCA+TGG | - | chr4.2:8328934-8328953 | None:intergenic | 30.0% | |
| AGATAAACTTGATGTAGAGA+TGG | + | chr4.2:8329957-8329976 | MS.gene030571:CDS | 30.0% | |
| CATCTATAATAACAGGATAC+CGG | + | chr4.2:8328085-8328104 | MS.gene030571:intron | 30.0% | |
| GAAAGAAACCAAAACAAAGA+AGG | + | chr4.2:8330110-8330129 | MS.gene030571:CDS | 30.0% | |
| GAAGATTATGATGATAGTCA+TGG | - | chr4.2:8328963-8328982 | None:intergenic | 30.0% | |
| GATAAACTTGATGTAGAGAT+GGG | + | chr4.2:8329958-8329977 | MS.gene030571:CDS | 30.0% | |
| GATTACTTAACTGCTATTAC+TGG | - | chr4.2:8330789-8330808 | None:intergenic | 30.0% | |
| GGAATGTGTACTAGATAATA+TGG | + | chr4.2:8327826-8327845 | MS.gene030571:intron | 30.0% | |
| GTATATCAATAAATTTGCCC+TGG | + | chr4.2:8328699-8328718 | MS.gene030571:intron | 30.0% | |
| GTATTGGATCAATCTATTGT+TGG | + | chr4.2:8329853-8329872 | MS.gene030571:CDS | 30.0% | |
| TATGTTGTAATGAATCTGCT+CGG | + | chr4.2:8328310-8328329 | MS.gene030571:intron | 30.0% | |
| TCATATAAACAGCAACACAA+AGG | - | chr4.2:8330694-8330713 | None:intergenic | 30.0% | |
| TGAAAACAATGGTTATTGCT+CGG | + | chr4.2:8328168-8328187 | MS.gene030571:intron | 30.0% | |
| TGAACTTACCAAATCCATTA+CGG | - | chr4.2:8331119-8331138 | None:intergenic | 30.0% | |
| TTCAAAAATCCATTCATTGG+AGG | + | chr4.2:8330185-8330204 | MS.gene030571:CDS | 30.0% | |
| TTTAGTTGTAGTTTGGACTA+TGG | - | chr4.2:8330619-8330638 | None:intergenic | 30.0% | |
| TTTCACAGAAGTTTAAACCA+AGG | + | chr4.2:8328995-8329014 | MS.gene030571:intron | 30.0% | |
| ! | AATTTTTCACCTCCTTTTTG+GGG | - | chr4.2:8331024-8331043 | None:intergenic | 30.0% |
| ! | AGAAAGATTTTCTGATGAAC+AGG | + | chr4.2:8327660-8327679 | MS.gene030571:CDS | 30.0% |
| ! | CAATTTTTCACCTCCTTTTT+GGG | - | chr4.2:8331025-8331044 | None:intergenic | 30.0% |
| ! | GAGATAGTTTGTAAATGTCT+AGG | + | chr4.2:8328140-8328159 | MS.gene030571:intron | 30.0% |
| ! | GAGATTTTCACTTGAGAAAA+TGG | - | chr4.2:8327864-8327883 | None:intergenic | 30.0% |
| ! | TCAATTTTTCACCTCCTTTT+TGG | - | chr4.2:8331026-8331045 | None:intergenic | 30.0% |
| !! | AACTATCTCCTTCTTTGTTT+TGG | - | chr4.2:8330121-8330140 | None:intergenic | 30.0% |
| !! | AACTTAGTATCTGCTATTTC+AGG | + | chr4.2:8330840-8330859 | MS.gene030571:intron | 30.0% |
| !! | ATGGTTCATTTTTCTTACCT+TGG | + | chr4.2:8328933-8328952 | MS.gene030571:intron | 30.0% |
| !! | GAAAGTGTCTTTACTTTAAG+GGG | + | chr4.2:8327987-8328006 | MS.gene030571:intron | 30.0% |
| !! | TGGTTCATTTTTCTTACCTT+GGG | + | chr4.2:8328934-8328953 | MS.gene030571:intron | 30.0% |
| AAACAGCAACACAAAGGAAT+TGG | - | chr4.2:8330688-8330707 | None:intergenic | 35.0% | |
| AACAGCAACACAAAGGAATT+GGG | - | chr4.2:8330687-8330706 | None:intergenic | 35.0% | |
| AATTAGTGCCAAAGAAGACA+TGG | + | chr4.2:8328538-8328557 | MS.gene030571:CDS | 35.0% | |
| ACAGATAACATTTCAGATGG+TGG | + | chr4.2:8329619-8329638 | MS.gene030571:CDS | 35.0% | |
| ACTTCACAAGTTAACTCCAT+AGG | - | chr4.2:8330988-8331007 | None:intergenic | 35.0% | |
| ATGATTTCCTTGAGATGGAA+AGG | + | chr4.2:8329776-8329795 | MS.gene030571:CDS | 35.0% | |
| ATTGGAGGAAGAGATTCAAA+AGG | + | chr4.2:8330200-8330219 | MS.gene030571:CDS | 35.0% | |
| CAAAAAACCATTGCATCTCT+TGG | + | chr4.2:8330904-8330923 | MS.gene030571:CDS | 35.0% | |
| CTTCACAAGTTAACTCCATA+GGG | - | chr4.2:8330987-8331006 | None:intergenic | 35.0% | |
| GATCAATCTATTGTTGGTCA+AGG | + | chr4.2:8329859-8329878 | MS.gene030571:CDS | 35.0% | |
| GATTGAAAAGAATGCCGAAT+TGG | + | chr4.2:8329909-8329928 | MS.gene030571:CDS | 35.0% | |
| GGTGTACTAACTTCTTCAAT+TGG | - | chr4.2:8328449-8328468 | None:intergenic | 35.0% | |
| TATTGTTGGTCAAGGTACAA+TGG | + | chr4.2:8329867-8329886 | MS.gene030571:CDS | 35.0% | |
| TCAATAAATTTGCCCTGGTT+TGG | + | chr4.2:8328704-8328723 | MS.gene030571:intron | 35.0% | |
| TCTAGGCTACATGAAAACAA+TGG | + | chr4.2:8328157-8328176 | MS.gene030571:intron | 35.0% | |
| TCTTTCACAATTCAGTCTTG+TGG | + | chr4.2:8327804-8327823 | MS.gene030571:intron | 35.0% | |
| TGTCTCAGGTATTTACTGTT+TGG | + | chr4.2:8328592-8328611 | MS.gene030571:intron | 35.0% | |
| TTCAACTGAGATCAATCTCA+TGG | + | chr4.2:8329753-8329772 | MS.gene030571:CDS | 35.0% | |
| TTTGTTGCAATGAATCTGCT+CGG | + | chr4.2:8328237-8328256 | MS.gene030571:intron | 35.0% | |
| ! | AAGATTTTCTGATGAACAGG+TGG | + | chr4.2:8327663-8327682 | MS.gene030571:intron | 35.0% |
| ! | ACTGAAATTTGCTCAAACTG+AGG | + | chr4.2:8330149-8330168 | MS.gene030571:CDS | 35.0% |
| ! | CAATTTTACTCACTGTCACA+TGG | + | chr4.2:8327755-8327774 | MS.gene030571:intron | 35.0% |
| ! | CTTTCACAATTCAGTCTTGT+GGG | + | chr4.2:8327805-8327824 | MS.gene030571:intron | 35.0% |
| !! | AAAATCTCGGTGTTTGTTGA+AGG | + | chr4.2:8327876-8327895 | MS.gene030571:intron | 35.0% |
| !! | ATTTTATTTAGGCTGGGAGA+AGG | + | chr4.2:8329045-8329064 | MS.gene030571:intron | 35.0% |
| !!! | AGTTCGCTTTTTAAGCATTC+AGG | + | chr4.2:8328212-8328231 | MS.gene030571:intron | 35.0% |
| !!! | CAAGAGATGCAATGGTTTTT+TGG | - | chr4.2:8330906-8330925 | None:intergenic | 35.0% |
| AAAGAAGCTGGAGAAAATGG+AGG | + | chr4.2:8329933-8329952 | MS.gene030571:CDS | 40.0% | |
| ACACAACAAAGTCCCCAAAA+AGG | + | chr4.2:8331009-8331028 | MS.gene030571:CDS | 40.0% | |
| ACAGCAACACAAAGGAATTG+GGG | - | chr4.2:8330686-8330705 | None:intergenic | 40.0% | |
| ACTCATGAGAAAAGCCGTAA+TGG | + | chr4.2:8331102-8331121 | MS.gene030571:CDS | 40.0% | |
| AGAATTCAGGATTGCAGAGA+GGG | + | chr4.2:8329426-8329445 | MS.gene030571:CDS | 40.0% | |
| AGCTCGAGAAATCAGAGAAT+CGG | + | chr4.2:8330001-8330020 | MS.gene030571:CDS | 40.0% | |
| AGGTACAATGGAAGCTGAAA+TGG | + | chr4.2:8329879-8329898 | MS.gene030571:CDS | 40.0% | |
| AGTGGAAGCCGTTATGTTAA+TGG | + | chr4.2:8329823-8329842 | MS.gene030571:CDS | 40.0% | |
| ATACCTTCACAGTTACAGCA+TGG | - | chr4.2:8328379-8328398 | None:intergenic | 40.0% | |
| CATGGATGATTTCCTTGAGA+TGG | + | chr4.2:8329771-8329790 | MS.gene030571:CDS | 40.0% | |
| CTAACTTCTTCAATTGGTGC+AGG | - | chr4.2:8328443-8328462 | None:intergenic | 40.0% | |
| CTCGTCCTCCATTAACATAA+CGG | - | chr4.2:8329834-8329853 | None:intergenic | 40.0% | |
| CTGAGAATTCAATCAAGAGC+AGG | + | chr4.2:8330238-8330257 | MS.gene030571:CDS | 40.0% | |
| CTGCTTTACCATGTCTTCTT+TGG | - | chr4.2:8328549-8328568 | None:intergenic | 40.0% | |
| GAATCTCTTCCTCCAATGAA+TGG | - | chr4.2:8330197-8330216 | None:intergenic | 40.0% | |
| GACAACGAGAGCAATTATTC+CGG | - | chr4.2:8328107-8328126 | None:intergenic | 40.0% | |
| GACTTGAGGAACTAGAATTC+AGG | + | chr4.2:8329413-8329432 | MS.gene030571:CDS | 40.0% | |
| GAGTCATGGATTTCAGTCTA+CGG | - | chr4.2:8329534-8329553 | None:intergenic | 40.0% | |
| GATAAGAGCAGCAGAATTGA+AGG | + | chr4.2:8330023-8330042 | MS.gene030571:CDS | 40.0% | |
| GCAAAAGATCTATGAAGCTG+TGG | + | chr4.2:8329210-8329229 | MS.gene030571:CDS | 40.0% | |
| GCAAATAACTCACATGACTC+GGG | + | chr4.2:8329232-8329251 | MS.gene030571:CDS | 40.0% | |
| GGAAAAGAAGCTGGAGAAAA+TGG | + | chr4.2:8329930-8329949 | MS.gene030571:CDS | 40.0% | |
| GGCAAATAACTCACATGACT+CGG | + | chr4.2:8329231-8329250 | MS.gene030571:CDS | 40.0% | |
| GTTGAAGTCTCTTGCAACAT+TGG | + | chr4.2:8330933-8330952 | MS.gene030571:CDS | 40.0% | |
| TACCTTCACAGTTACAGCAT+GGG | - | chr4.2:8328378-8328397 | None:intergenic | 40.0% | |
| TACTCACTGTCACATGGTTT+GGG | + | chr4.2:8327761-8327780 | MS.gene030571:intron | 40.0% | |
| TAGAATTCAGGATTGCAGAG+AGG | + | chr4.2:8329425-8329444 | MS.gene030571:CDS | 40.0% | |
| TCAGGACAAAGAACTTGCAT+TGG | + | chr4.2:8330858-8330877 | MS.gene030571:intron | 40.0% | |
| TCTCTCAAGTTCGAATCTTC+TGG | - | chr4.2:8329260-8329279 | None:intergenic | 40.0% | |
| TGCATTTGTAGTTTGGACTC+TGG | + | chr4.2:8330640-8330659 | MS.gene030571:intron | 40.0% | |
| TGTTAATGGAGGACGAGTAT+TGG | + | chr4.2:8329837-8329856 | MS.gene030571:CDS | 40.0% | |
| TGTTGCAGACATTGTGAAAC+AGG | + | chr4.2:8327958-8327977 | MS.gene030571:intron | 40.0% | |
| TTACTCACTGTCACATGGTT+TGG | + | chr4.2:8327760-8327779 | MS.gene030571:intron | 40.0% | |
| TTCAAGCTTAGCAACCTTCT+TGG | - | chr4.2:8329503-8329522 | None:intergenic | 40.0% | |
| TTCAATCAAGAGCAGGAAGT+TGG | + | chr4.2:8330245-8330264 | MS.gene030571:CDS | 40.0% | |
| ! | AAAAATTGAGGGCGTGAATG+TGG | + | chr4.2:8327909-8327928 | MS.gene030571:intron | 40.0% |
| ! | ATCAAGTCTCCTCTGAAGAT+CGG | - | chr4.2:8329347-8329366 | None:intergenic | 40.0% |
| ! | ATTTTCCTTGTGCAAAGTCC+TGG | - | chr4.2:8330319-8330338 | None:intergenic | 40.0% |
| ! | CTCCAGCTTCTTTTCCAATT+CGG | - | chr4.2:8329926-8329945 | None:intergenic | 40.0% |
| ! | TCGCGATTTGAAGTCAAAAC+AGG | + | chr4.2:8330344-8330363 | MS.gene030571:CDS | 40.0% |
| ! | TGCTTCTTTTTGCTTGTCCA+TGG | + | chr4.2:8328914-8328933 | MS.gene030571:intron | 40.0% |
| !! | AAATTTGGAGAGCACCAAGA+AGG | + | chr4.2:8329486-8329505 | MS.gene030571:CDS | 40.0% |
| !! | GAGAAAAGCCGTAATGGATT+TGG | + | chr4.2:8331108-8331127 | MS.gene030571:CDS | 40.0% |
| AAGTCATCGGAGAAAAGTCC+AGG | + | chr4.2:8327601-8327620 | MS.gene030571:CDS | 45.0% | |
| AATCAAGAGCAGGAAGTTGG+AGG | + | chr4.2:8330248-8330267 | MS.gene030571:CDS | 45.0% | |
| ACCGAGTTAGTCACCTTGAT+GGG | + | chr4.2:8329137-8329156 | MS.gene030571:CDS | 45.0% | |
| ATCAAGAGCAGGAAGTTGGA+GGG | + | chr4.2:8330249-8330268 | MS.gene030571:CDS | 45.0% | |
| ATGATAGTCATGGCTTCCCA+AGG | - | chr4.2:8328953-8328972 | None:intergenic | 45.0% | |
| CAACAAAGTCCCCAAAAAGG+AGG | + | chr4.2:8331012-8331031 | MS.gene030571:CDS | 45.0% | |
| CAGCAACACAAAGGAATTGG+GGG | - | chr4.2:8330685-8330704 | None:intergenic | 45.0% | |
| CTCGGTCTGCAAATTTCTCA+TGG | + | chr4.2:8328186-8328205 | MS.gene030571:intron | 45.0% | |
| CTGATTTCTCGAGCTGCATT+TGG | - | chr4.2:8329996-8330015 | None:intergenic | 45.0% | |
| CTGCCTCATACACTCTTTGA+GGG | - | chr4.2:8329164-8329183 | None:intergenic | 45.0% | |
| CTGCTTTCCAAGAGATGCAA+TGG | - | chr4.2:8330914-8330933 | None:intergenic | 45.0% | |
| CTTCACAACCATCATGATCC+CGG | + | chr4.2:8328857-8328876 | MS.gene030571:intron | 45.0% | |
| GAACATGAGTCAGAACAGCT+TGG | - | chr4.2:8329664-8329683 | None:intergenic | 45.0% | |
| GAGAAAAGTTGCTGAGCTTG+AGG | + | chr4.2:8329276-8329295 | MS.gene030571:CDS | 45.0% | |
| GCTTTGCCAGATACAGAAAG+TGG | + | chr4.2:8329805-8329824 | MS.gene030571:CDS | 45.0% | |
| GGAAGCCGTTATGTTAATGG+AGG | + | chr4.2:8329826-8329845 | MS.gene030571:CDS | 45.0% | |
| GGCTGTTGTCTGAATCAAGT+AGG | - | chr4.2:8330966-8330985 | None:intergenic | 45.0% | |
| GGTGATAGAGTAGCTTGGAT+TGG | - | chr4.2:8328404-8328423 | None:intergenic | 45.0% | |
| TCCTAACTCCTAACGTGAAC+CGG | - | chr4.2:8328879-8328898 | None:intergenic | 45.0% | |
| TGATTCAGACAACAGCCCTA+TGG | + | chr4.2:8330969-8330988 | MS.gene030571:CDS | 45.0% | |
| TGCCGAATTGGAAAAGAAGC+TGG | + | chr4.2:8329921-8329940 | MS.gene030571:CDS | 45.0% | |
| TTCCCATGCTGTAACTGTGA+AGG | + | chr4.2:8328373-8328392 | MS.gene030571:intron | 45.0% | |
| ! | AAGAAGCAAGAGTGTGAGCA+GGG | + | chr4.2:8331143-8331162 | MS.gene030571:CDS | 45.0% |
| ! | CTTTTGCTCTTGCACTTCTC+TGG | - | chr4.2:8329197-8329216 | None:intergenic | 45.0% |
| ! | GTTATGGCGGAGAAAGTCAT+CGG | + | chr4.2:8327588-8327607 | MS.gene030571:CDS | 45.0% |
| ! | TACTAGCTGTTTCAGCAGCT+TGG | - | chr4.2:8329462-8329481 | None:intergenic | 45.0% |
| AACGTGAACCGGGATCATGA+TGG | - | chr4.2:8328868-8328887 | None:intergenic | 50.0% | |
| AGATGCCAGGACTTTGCACA+AGG | + | chr4.2:8330311-8330330 | MS.gene030571:CDS | 50.0% | |
| CAGCAAGCCTTTCCATCTCA+AGG | - | chr4.2:8329786-8329805 | None:intergenic | 50.0% | |
| CCAAGCTACTCTATCACCAG+AGG | + | chr4.2:8328406-8328425 | MS.gene030571:CDS | 50.0% | |
| CCCCATCAAGGTGACTAACT+CGG | - | chr4.2:8329141-8329160 | None:intergenic | 50.0% | |
| CCGAGTTAGTCACCTTGATG+GGG | + | chr4.2:8329138-8329157 | MS.gene030571:CDS | 50.0% | |
| CCTAACTCCTAACGTGAACC+GGG | - | chr4.2:8328878-8328897 | None:intergenic | 50.0% | |
| CCTCTGGTGATAGAGTAGCT+TGG | - | chr4.2:8328409-8328428 | None:intergenic | 50.0% | |
| CGAATTAGCTGCAGCTCTGT+TGG | + | chr4.2:8328514-8328533 | MS.gene030571:CDS | 50.0% | |
| CGGCTTCCACTTTCTGTATC+TGG | - | chr4.2:8329814-8329833 | None:intergenic | 50.0% | |
| CTATTCGCTCCGATCTTCAG+AGG | + | chr4.2:8329335-8329354 | MS.gene030571:CDS | 50.0% | |
| CTCAAGTTCAGCAAGATGCC+AGG | + | chr4.2:8330298-8330317 | MS.gene030571:CDS | 50.0% | |
| CTCGGTCTGCACATTCTTCA+TGG | + | chr4.2:8328255-8328274 | MS.gene030571:intron | 50.0% | |
| CTGCTCACACTCTTGCTTCT+TGG | - | chr4.2:8331144-8331163 | None:intergenic | 50.0% | |
| GACCGAGTTAGTCACCTTGA+TGG | + | chr4.2:8329136-8329155 | MS.gene030571:CDS | 50.0% | |
| GAGACTTGATGCTGTGGAGA+AGG | + | chr4.2:8329357-8329376 | MS.gene030571:CDS | 50.0% | |
| GCTAGTCAACAGCAGCTTGT+CGG | - | chr4.2:8330574-8330593 | None:intergenic | 50.0% | |
| GCTGCAAGACAGAAGAACTC+AGG | + | chr4.2:8329106-8329125 | MS.gene030571:CDS | 50.0% | |
| GCTGCCTCATACACTCTTTG+AGG | - | chr4.2:8329165-8329184 | None:intergenic | 50.0% | |
| GGTGACTAACTCGGTCTTCA+AGG | - | chr4.2:8329132-8329151 | None:intergenic | 50.0% | |
| GTTGCTGAAGAAGCTGTCTC+AGG | + | chr4.2:8328578-8328597 | MS.gene030571:CDS | 50.0% | |
| TCAGAGGAGACTTGATGCTG+TGG | + | chr4.2:8329351-8329370 | MS.gene030571:CDS | 50.0% | |
| TCATGATCCCGGTTCACGTT+AGG | + | chr4.2:8328868-8328887 | MS.gene030571:intron | 50.0% | |
| ! | ACAGGAGGAGTTGGTTATGG+CGG | + | chr4.2:8327575-8327594 | MS.gene030571:CDS | 50.0% |
| ! | CAAGAAGCAAGAGTGTGAGC+AGG | + | chr4.2:8331142-8331161 | MS.gene030571:CDS | 50.0% |
| ! | GTAGTTTGGACTCTGGAAGC+AGG | + | chr4.2:8330647-8330666 | MS.gene030571:intron | 50.0% |
| ! | TGAGCTGCAATCTCGACTTG+AGG | + | chr4.2:8329399-8329418 | MS.gene030571:CDS | 50.0% |
| ! | TGGACAGGAGGAGTTGGTTA+TGG | + | chr4.2:8327572-8327591 | MS.gene030571:CDS | 50.0% |
| !! | GCACTCAGCAAACTTGCTAG+TGG | - | chr4.2:8330884-8330903 | None:intergenic | 50.0% |
| AGCAGCTTGTCGGTAGTCGA+CGG | - | chr4.2:8330564-8330583 | None:intergenic | 55.0% | |
| CCCGGTTCACGTTAGGAGTT+AGG | + | chr4.2:8328875-8328894 | MS.gene030571:intron | 55.0% | |
| CTGGGAGAAGGCTGAAAACG+AGG | + | chr4.2:8329057-8329076 | MS.gene030571:CDS | 55.0% | |
| GCAGGCTTAGATGTGACCTC+TGG | - | chr4.2:8328425-8328444 | None:intergenic | 55.0% | |
| GCTCTTGCACTTCTCTGGCT+TGG | - | chr4.2:8329192-8329211 | None:intergenic | 55.0% | |
| GGAGAAAAGTCCAGGCGAGA+CGG | + | chr4.2:8327609-8327628 | MS.gene030571:CDS | 55.0% | |
| ! | ACTCTTTGAGGGCCCCATCA+AGG | - | chr4.2:8329153-8329172 | None:intergenic | 55.0% |
| ! | GGGCCCTCAAAGAGTGTATG+AGG | + | chr4.2:8329158-8329177 | MS.gene030571:CDS | 55.0% |
| CCAGGCGAGACGGAGAGTTC+AGG | + | chr4.2:8327619-8327638 | MS.gene030571:CDS | 65.0% | |
| CCTGAACTCTCCGTCTCGCC+TGG | - | chr4.2:8327622-8327641 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 8327571 | 8331173 | 8327571 | ID=MS.gene030571 |
| chr4.2 | mRNA | 8327571 | 8331173 | 8327571 | ID=MS.gene030571.t1;Parent=MS.gene030571 |
| chr4.2 | exon | 8327571 | 8327681 | 8327571 | ID=MS.gene030571.t1.exon1;Parent=MS.gene030571.t1 |
| chr4.2 | CDS | 8327571 | 8327681 | 8327571 | ID=cds.MS.gene030571.t1;Parent=MS.gene030571.t1 |
| chr4.2 | exon | 8328395 | 8328599 | 8328395 | ID=MS.gene030571.t1.exon2;Parent=MS.gene030571.t1 |
| chr4.2 | CDS | 8328395 | 8328599 | 8328395 | ID=cds.MS.gene030571.t1;Parent=MS.gene030571.t1 |
| chr4.2 | exon | 8329056 | 8330365 | 8329056 | ID=MS.gene030571.t1.exon3;Parent=MS.gene030571.t1 |
| chr4.2 | CDS | 8329056 | 8330365 | 8329056 | ID=cds.MS.gene030571.t1;Parent=MS.gene030571.t1 |
| chr4.2 | exon | 8330862 | 8331173 | 8330862 | ID=MS.gene030571.t1.exon4;Parent=MS.gene030571.t1 |
| chr4.2 | CDS | 8330862 | 8331173 | 8330862 | ID=cds.MS.gene030571.t1;Parent=MS.gene030571.t1 |
| Gene Sequence |
| Protein sequence |
