Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026637.t1 | XP_013466487.1 | 92.4 | 855 | 39 | 2 | 1 | 854 | 1 | 830 | 7.30E-274 | 953.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026637.t1 | Q8LLE5 | 59.2 | 321 | 122 | 4 | 185 | 497 | 1 | 320 | 2.7e-83 | 311.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026637.t1 | A0A072VGG6 | 92.4 | 855 | 39 | 2 | 1 | 854 | 1 | 830 | 5.3e-274 | 953.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013262 | MS.gene026637 | PPI |
| MS.gene030570 | MS.gene026637 | PPI |
| MS.gene06347 | MS.gene026637 | PPI |
| MS.gene030571 | MS.gene026637 | PPI |
| MS.gene73663 | MS.gene026637 | PPI |
| MS.gene40942 | MS.gene026637 | PPI |
| MS.gene049233 | MS.gene026637 | PPI |
| MS.gene49718 | MS.gene026637 | PPI |
| MS.gene70169 | MS.gene026637 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026637.t1 | MTR_1g030010 | 93.560 | 854 | 31 | 1 | 1 | 854 | 1 | 830 | 0.0 | 1519 |
| MS.gene026637.t1 | MTR_3g096990 | 40.533 | 713 | 348 | 14 | 150 | 814 | 39 | 723 | 3.39e-126 | 396 |
| MS.gene026637.t1 | MTR_8g094760 | 47.149 | 456 | 201 | 5 | 169 | 603 | 61 | 497 | 6.94e-110 | 350 |
| MS.gene026637.t1 | MTR_8g094760 | 36.771 | 223 | 80 | 7 | 653 | 851 | 441 | 626 | 1.13e-20 | 97.8 |
| MS.gene026637.t1 | MTR_8g094760 | 47.149 | 456 | 201 | 5 | 169 | 603 | 73 | 509 | 1.81e-109 | 350 |
| MS.gene026637.t1 | MTR_8g094760 | 36.620 | 213 | 75 | 6 | 662 | 851 | 463 | 638 | 1.19e-20 | 97.8 |
| MS.gene026637.t1 | MTR_3g096990 | 46.237 | 465 | 218 | 6 | 161 | 603 | 50 | 504 | 2.01e-101 | 328 |
| MS.gene026637.t1 | MTR_3g096990 | 37.363 | 182 | 87 | 5 | 656 | 814 | 452 | 629 | 1.31e-18 | 91.3 |
| MS.gene026637.t1 | MTR_3g113290 | 42.489 | 233 | 109 | 2 | 160 | 367 | 86 | 318 | 2.91e-43 | 170 |
| MS.gene026637.t1 | MTR_1g024095 | 41.434 | 251 | 119 | 3 | 160 | 382 | 67 | 317 | 3.73e-41 | 164 |
| MS.gene026637.t1 | MTR_1g024095 | 41.434 | 251 | 119 | 3 | 160 | 382 | 67 | 317 | 4.12e-41 | 163 |
| MS.gene026637.t1 | MTR_5g021810 | 36.087 | 230 | 122 | 2 | 163 | 367 | 71 | 300 | 3.26e-33 | 137 |
| MS.gene026637.t1 | MTR_5g021810 | 36.087 | 230 | 122 | 2 | 163 | 367 | 70 | 299 | 3.30e-33 | 137 |
| MS.gene026637.t1 | MTR_4g094848 | 37.220 | 223 | 115 | 3 | 162 | 359 | 33 | 255 | 4.83e-28 | 122 |
| MS.gene026637.t1 | MTR_5g016830 | 31.988 | 322 | 156 | 7 | 171 | 461 | 50 | 339 | 1.50e-26 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026637.t1 | AT1G21810 | 38.174 | 723 | 291 | 17 | 182 | 854 | 13 | 629 | 1.19e-107 | 345 |
| MS.gene026637.t1 | AT1G21810 | 38.174 | 723 | 291 | 17 | 182 | 854 | 13 | 629 | 1.19e-107 | 345 |
| MS.gene026637.t1 | AT3G05270 | 38.308 | 650 | 323 | 12 | 130 | 760 | 25 | 615 | 5.42e-91 | 300 |
| MS.gene026637.t1 | AT3G05270 | 48.649 | 74 | 28 | 2 | 3 | 75 | 2 | 66 | 6.70e-13 | 72.8 |
| MS.gene026637.t1 | AT3G05270 | 38.308 | 650 | 323 | 12 | 130 | 760 | 25 | 615 | 5.42e-91 | 300 |
| MS.gene026637.t1 | AT3G05270 | 48.649 | 74 | 28 | 2 | 3 | 75 | 2 | 66 | 6.70e-13 | 72.8 |
| MS.gene026637.t1 | AT3G05270 | 38.308 | 650 | 323 | 12 | 130 | 760 | 25 | 615 | 5.42e-91 | 300 |
| MS.gene026637.t1 | AT3G05270 | 48.649 | 74 | 28 | 2 | 3 | 75 | 2 | 66 | 6.70e-13 | 72.8 |
| MS.gene026637.t1 | AT1G77580 | 48.688 | 343 | 124 | 6 | 162 | 498 | 22 | 318 | 1.11e-81 | 275 |
| MS.gene026637.t1 | AT1G77580 | 48.980 | 343 | 123 | 7 | 162 | 498 | 22 | 318 | 1.00e-80 | 276 |
| MS.gene026637.t1 | AT1G77580 | 48.980 | 343 | 123 | 7 | 162 | 498 | 56 | 352 | 1.83e-80 | 276 |
| MS.gene026637.t1 | AT1G77580 | 48.980 | 343 | 123 | 7 | 162 | 498 | 56 | 352 | 1.83e-80 | 276 |
| MS.gene026637.t1 | AT1G21810 | 34.958 | 595 | 248 | 16 | 310 | 854 | 1 | 506 | 6.99e-64 | 223 |
| MS.gene026637.t1 | AT1G19835 | 39.773 | 264 | 127 | 4 | 164 | 396 | 61 | 323 | 3.27e-42 | 167 |
| MS.gene026637.t1 | AT1G19835 | 39.773 | 264 | 127 | 4 | 164 | 396 | 61 | 323 | 3.27e-42 | 167 |
| MS.gene026637.t1 | AT1G19835 | 39.773 | 264 | 127 | 4 | 164 | 396 | 61 | 323 | 3.27e-42 | 167 |
| MS.gene026637.t1 | AT1G19835 | 39.773 | 264 | 127 | 4 | 164 | 396 | 61 | 323 | 3.27e-42 | 167 |
| MS.gene026637.t1 | AT1G19835 | 39.773 | 264 | 127 | 4 | 164 | 396 | 61 | 323 | 3.27e-42 | 167 |
| MS.gene026637.t1 | AT1G19835 | 39.773 | 264 | 127 | 4 | 164 | 396 | 61 | 323 | 3.27e-42 | 167 |
| MS.gene026637.t1 | AT1G47900 | 34.354 | 294 | 163 | 4 | 133 | 396 | 78 | 371 | 2.36e-38 | 155 |
| MS.gene026637.t1 | AT1G47900 | 34.354 | 294 | 163 | 4 | 133 | 396 | 78 | 371 | 2.90e-38 | 154 |
| MS.gene026637.t1 | AT1G47900 | 34.354 | 294 | 163 | 4 | 133 | 396 | 78 | 371 | 2.90e-38 | 154 |
| MS.gene026637.t1 | AT4G36120 | 39.286 | 224 | 111 | 2 | 169 | 367 | 76 | 299 | 4.68e-36 | 147 |
| MS.gene026637.t1 | AT4G36120 | 39.286 | 224 | 111 | 2 | 169 | 367 | 76 | 299 | 4.68e-36 | 147 |
| MS.gene026637.t1 | AT2G23360 | 38.389 | 211 | 105 | 2 | 182 | 367 | 42 | 252 | 1.30e-23 | 107 |
Find 172 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGCATTCGGCAAGCTTTC+CGG | 0.169197 | 1.4:+15154457 | None:intergenic |
| TATCGTTTGCTTTGATTTGT+AGG | 0.197140 | 1.4:+15155252 | None:intergenic |
| CCAGAAAACAATAGCATCTT+TGG | 0.227504 | 1.4:-15154438 | MS.gene026637:CDS |
| TTGAAGCATCTAATTTCTTC+TGG | 0.228386 | 1.4:+15156058 | None:intergenic |
| AGCTTTCCTCATATTTGTTC+AGG | 0.245451 | 1.4:+15154231 | None:intergenic |
| CAGCAAATGGATGAACTAAA+AGG | 0.264463 | 1.4:-15155415 | MS.gene026637:CDS |
| AAAGGAGGCAGTTCAGAAAT+TGG | 0.278157 | 1.4:-15155302 | MS.gene026637:CDS |
| AGAGAGACTCCACTTCTTCT+AGG | 0.279649 | 1.4:-15154280 | MS.gene026637:CDS |
| TTCTTTGTCAACGCATTTAT+CGG | 0.285448 | 1.4:+15155471 | None:intergenic |
| CTGTTTAACCAAGTCTTCTT+TGG | 0.288311 | 1.4:+15156854 | None:intergenic |
| CCTACTACATGCATCATAAA+TGG | 0.290764 | 1.4:-15157152 | MS.gene026637:CDS |
| TGCTATTAAGTGTAGGGAAT+TGG | 0.296111 | 1.4:-15154810 | MS.gene026637:CDS |
| ATCACGTTCAATAGAAGATT+TGG | 0.299352 | 1.4:+15156032 | None:intergenic |
| TTCTCAGAACTGGCGTGATT+TGG | 0.303370 | 1.4:+15154167 | None:intergenic |
| AGATGAATGGTTCGGAAAAC+AGG | 0.317621 | 1.4:-15155696 | MS.gene026637:CDS |
| TACTAGCTGTCTCAGCTACT+TGG | 0.324182 | 1.4:+15155899 | None:intergenic |
| TCATCAGAGGTAGATGAAAA+TGG | 0.339325 | 1.4:-15157125 | MS.gene026637:CDS |
| CCAGGTGAAGCTGAGAGTTC+AGG | 0.360722 | 1.4:-15158034 | MS.gene026637:CDS |
| AAAAGGGAAGTTAGAGAAAG+TGG | 0.369237 | 1.4:-15155398 | MS.gene026637:CDS |
| CAGAAAACAATAGCATCTTT+GGG | 0.371111 | 1.4:-15154437 | MS.gene026637:CDS |
| AGCCGAAAAGACTCGCGAAT+TGG | 0.372165 | 1.4:-15156121 | MS.gene026637:CDS |
| GGAGTCACATCTTCAGTTAA+AGG | 0.375808 | 1.4:-15155320 | MS.gene026637:CDS |
| TCATCTAGATGGAGCACTTA+AGG | 0.382656 | 1.4:-15156205 | MS.gene026637:CDS |
| GAAGAAGTGGAGTCTCTCTT+AGG | 0.390406 | 1.4:+15154284 | None:intergenic |
| CCCGCATGAGCAATGATTGC+TGG | 0.393330 | 1.4:+15154347 | None:intergenic |
| GAATGCTAGCAGTGTCAATA+AGG | 0.394242 | 1.4:+15154378 | None:intergenic |
| GCAATGATTGCTGGACTTGC+GGG | 0.396942 | 1.4:+15154356 | None:intergenic |
| GGTAGATGAAAATGGAGAAA+AGG | 0.409058 | 1.4:-15157117 | MS.gene026637:CDS |
| GCTTTCCGGCCGCGAGTGCT+AGG | 0.411337 | 1.4:+15154471 | None:intergenic |
| AGGCCAACAGCTAGCTTGTA+TGG | 0.413438 | 1.4:-15154773 | MS.gene026637:CDS |
| CAGATAAGAAGAGATGGTTA+TGG | 0.415459 | 1.4:-15158081 | MS.gene026637:CDS |
| CTTAGAAGCAGAGGTTGAAA+AGG | 0.424596 | 1.4:-15154855 | MS.gene026637:CDS |
| GTTAGAATCAGAGATTGTTA+AGG | 0.425792 | 1.4:-15154960 | MS.gene026637:CDS |
| TGCTTTCTAACTCTTCCTCC+AGG | 0.429108 | 1.4:+15155107 | None:intergenic |
| GATAGAGTCACTCATCTAGA+TGG | 0.442078 | 1.4:-15156216 | MS.gene026637:CDS |
| CGAAATTGCGGCCAAGTGTA+AGG | 0.444251 | 1.4:-15154921 | MS.gene026637:CDS |
| TTCTAGCCGAATACCACTCT+TGG | 0.444679 | 1.4:+15154109 | None:intergenic |
| GCTTTCCTCATATTTGTTCA+GGG | 0.445685 | 1.4:+15154232 | None:intergenic |
| AGTTCTGAGAAGGGTCGAAT+TGG | 0.445703 | 1.4:-15154155 | MS.gene026637:CDS |
| TGAGAAGTATTCTGATGAAC+AGG | 0.447757 | 1.4:-15157993 | MS.gene026637:intron |
| ATGGTTGGAGACAGAGAATA+TGG | 0.450444 | 1.4:-15155992 | MS.gene026637:CDS |
| ATTAGAAGCCGACGTTGATA+AGG | 0.452774 | 1.4:-15155065 | MS.gene026637:CDS |
| ATTAGAAGCAGAGGTTGATA+AGG | 0.454787 | 1.4:-15155170 | MS.gene026637:CDS |
| AGACAGAGAATATGGCTCTC+AGG | 0.458084 | 1.4:-15155984 | MS.gene026637:CDS |
| GGTGTTGATGCAATTTCATC+GGG | 0.459416 | 1.4:+15157179 | None:intergenic |
| GGGGAATCAGCTGAAATCTC+TGG | 0.459529 | 1.4:-15154417 | MS.gene026637:CDS |
| AATTCGACCCTTCTCAGAAC+TGG | 0.460941 | 1.4:+15154157 | None:intergenic |
| GTATCAAAGGAATCTTCTAA+TGG | 0.462051 | 1.4:-15157287 | MS.gene026637:CDS |
| TGTTATTAACATACCTGCTA+TGG | 0.464798 | 1.4:+15156809 | None:intergenic |
| AAAATCTAACTGACGGGTCG+AGG | 0.465615 | 1.4:-15156920 | MS.gene026637:CDS |
| CGCGAACCAAGAGTGGTATT+CGG | 0.471935 | 1.4:-15154115 | MS.gene026637:CDS |
| TATTTGCTTAGGCTGGGAAA+AGG | 0.474120 | 1.4:-15156307 | MS.gene026637:intron |
| TTCTCTTAAAATAGATCTGA+TGG | 0.475097 | 1.4:-15155575 | MS.gene026637:CDS |
| AAGCAGCTTTGTTGAGGAGT+TGG | 0.475100 | 1.4:-15155500 | MS.gene026637:CDS |
| CTGCTTGCGTTCTTAGTCTC+GGG | 0.481931 | 1.4:+15155517 | None:intergenic |
| GCTGCTTGCGTTCTTAGTCT+CGG | 0.482246 | 1.4:+15155516 | None:intergenic |
| TTCCGCCAGTTCCTTACACT+TGG | 0.484443 | 1.4:+15154910 | None:intergenic |
| AAGAAATTGCTATTAAGTGT+AGG | 0.491211 | 1.4:-15154817 | MS.gene026637:CDS |
| CCTGAACTCTCAGCTTCACC+TGG | 0.491399 | 1.4:+15158034 | None:intergenic |
| GAAAGCAAATCTGCAATGCT+TGG | 0.492262 | 1.4:-15155091 | MS.gene026637:CDS |
| TCTCCATACAAGCTAGCTGT+TGG | 0.492340 | 1.4:+15154770 | None:intergenic |
| GGACGAGATTCTAGTTCAAT+CGG | 0.494988 | 1.4:-15155962 | MS.gene026637:CDS |
| TGCGGCCAAGTGTAAGGAAC+TGG | 0.495454 | 1.4:-15154915 | MS.gene026637:CDS |
| AGGTGTTGATGCAATTTCAT+CGG | 0.499092 | 1.4:+15157178 | None:intergenic |
| ATTCTTGAATTGATCAAGCT+CGG | 0.500571 | 1.4:+15155630 | None:intergenic |
| AACTTGACATGGTCACTCTC+AGG | 0.504387 | 1.4:-15156254 | MS.gene026637:CDS |
| TGACATCATGACTCAGCAAA+TGG | 0.504440 | 1.4:-15155428 | MS.gene026637:CDS |
| AGCAAATGGATGAACTAAAA+GGG | 0.505397 | 1.4:-15155414 | MS.gene026637:CDS |
| AGCAGAGGTTGATAAGGAAA+GGG | 0.505776 | 1.4:-15155164 | MS.gene026637:CDS |
| AAGATCTAAATGACAGGTCA+AGG | 0.507900 | 1.4:-15156998 | MS.gene026637:CDS |
| AACCAAGTTGTTCTGACTCG+TGG | 0.509651 | 1.4:-15155669 | MS.gene026637:CDS |
| AGTCTGCCTCCATGCTCATT+AGG | 0.510576 | 1.4:+15155221 | None:intergenic |
| TGAACGTGATATGCGTCAAA+AGG | 0.511253 | 1.4:-15156019 | MS.gene026637:CDS |
| CCATTTATGATGCATGTAGT+AGG | 0.514775 | 1.4:+15157152 | None:intergenic |
| AAGTCTTCTGAGAAGAGTCC+AGG | 0.514823 | 1.4:-15158052 | MS.gene026637:CDS |
| AGAAATTGCTATTAAGTGTA+GGG | 0.517982 | 1.4:-15154816 | MS.gene026637:CDS |
| AACTTGATGGATCAGCTTGT+CGG | 0.521719 | 1.4:+15155596 | None:intergenic |
| GTAGAAGAAGACGATGAAAG+TGG | 0.521926 | 1.4:+15154206 | None:intergenic |
| ATCAGAGATTGTTAAGGAGA+GGG | 0.522890 | 1.4:-15154954 | MS.gene026637:CDS |
| TATTAAGTGTAGGGAATTGG+AGG | 0.523252 | 1.4:-15154807 | MS.gene026637:CDS |
| AGAAATTGCGAGGAAGTGTA+AGG | 0.525164 | 1.4:-15155131 | MS.gene026637:CDS |
| ATGTGGAGGATGCATTCAAA+TGG | 0.526273 | 1.4:-15154317 | MS.gene026637:CDS |
| AGGTTGGCTGACGGTAGCTC+CGG | 0.528682 | 1.4:-15154260 | MS.gene026637:CDS |
| AAGCAGAGGTTGATAAGGAA+AGG | 0.529296 | 1.4:-15155165 | MS.gene026637:CDS |
| TGCATCCCTGAACAAATATG+AGG | 0.529869 | 1.4:-15154237 | MS.gene026637:CDS |
| ATGATGCATGTAGTAGGTAA+AGG | 0.532551 | 1.4:+15157158 | None:intergenic |
| TGTCAATGCCAAAGAAGACT+TGG | 0.532566 | 1.4:-15156862 | MS.gene026637:CDS |
| TATCCTCAAGATGAATGGTT+CGG | 0.533006 | 1.4:-15155704 | MS.gene026637:CDS |
| ACTAGCTGTCTCAGCTACTT+GGG | 0.534380 | 1.4:+15155900 | None:intergenic |
| TTTCCGAACCATTCATCTTG+AGG | 0.535261 | 1.4:+15155701 | None:intergenic |
| GAGGACCTAGCACTCGCGGC+CGG | 0.536253 | 1.4:-15154476 | MS.gene026637:CDS |
| GAGCACTTAAGGAGTGCGTT+AGG | 0.537278 | 1.4:-15156194 | MS.gene026637:CDS |
| TGCTTCTAATAAGTCGACCT+TGG | 0.538097 | 1.4:+15155183 | None:intergenic |
| GCTATTGTTAATATATCGAA+TGG | 0.539242 | 1.4:-15157026 | MS.gene026637:CDS |
| AGACTCCACTTCTTCTAGGT+TGG | 0.540766 | 1.4:-15154276 | MS.gene026637:CDS |
| TGTGATATCCTCAAGATGAA+TGG | 0.547937 | 1.4:-15155709 | MS.gene026637:CDS |
| AAATCACGCCAGTTCTGAGA+AGG | 0.555578 | 1.4:-15154165 | MS.gene026637:CDS |
| GCGTCAAAAGGTTGAATGGT+TGG | 0.555698 | 1.4:-15156007 | MS.gene026637:CDS |
| GTCAGCCAACCTAGAAGAAG+TGG | 0.556265 | 1.4:+15154271 | None:intergenic |
| GAAAAGAAGATCTAAATGAC+AGG | 0.556552 | 1.4:-15157004 | MS.gene026637:CDS |
| AGATAGTCAGTCAGACAGTA+CGG | 0.558626 | 1.4:-15155752 | MS.gene026637:CDS |
| TTGAAAGCAGGAAGTATCAA+AGG | 0.558653 | 1.4:-15157300 | MS.gene026637:intron |
| CTCTCACACGCTATCTTCCA+AGG | 0.559134 | 1.4:-15155200 | MS.gene026637:CDS |
| ATATTTGTTCAGGGATGCAC+CGG | 0.560765 | 1.4:+15154241 | None:intergenic |
| GCTATTGTTAATATACCGAA+TGG | 0.561611 | 1.4:-15156951 | MS.gene026637:CDS |
| CCAGCAATCATTGCTCATGC+GGG | 0.562517 | 1.4:-15154347 | MS.gene026637:CDS |
| GAAATCTCTGGCTACACTTG+AGG | 0.562631 | 1.4:-15154405 | MS.gene026637:CDS |
| CCGACACTCGGACTCAAGCT+TGG | 0.562948 | 1.4:+15155846 | None:intergenic |
| GAACGCAAGCAGCTTTGTTG+AGG | 0.566647 | 1.4:-15155506 | MS.gene026637:CDS |
| AGCAGAGGTTGAAAAGGAGA+GGG | 0.567149 | 1.4:-15154849 | MS.gene026637:CDS |
| GACAGAGAATATGGCTCTCA+GGG | 0.568961 | 1.4:-15155983 | MS.gene026637:CDS |
| GTTGCTGAAGAAGCCATAGC+AGG | 0.570953 | 1.4:-15156822 | MS.gene026637:intron |
| GATGAATGGTTCGGAAAACA+GGG | 0.571474 | 1.4:-15155695 | MS.gene026637:CDS |
| TGAAATTGCAATAAAATGTG+AGG | 0.573293 | 1.4:-15155026 | MS.gene026637:CDS |
| TGCGAGGAAGTGTAAGGACC+TGG | 0.573315 | 1.4:-15155125 | MS.gene026637:CDS |
| ATCATCAACATCTTCAGCAC+AGG | 0.574007 | 1.4:+15157226 | None:intergenic |
| AATCAGAGATTGTTAAGGAG+AGG | 0.575395 | 1.4:-15154955 | MS.gene026637:CDS |
| AGGAAGAAAATCTAACTGAC+GGG | 0.576645 | 1.4:-15156926 | MS.gene026637:CDS |
| AAATCTAACTGACGGGTCGA+GGG | 0.578105 | 1.4:-15156919 | MS.gene026637:CDS |
| GAAAAGTGAAGAGTGTATTG+AGG | 0.578966 | 1.4:-15155341 | MS.gene026637:CDS |
| AATAAAATGTGAGGGTCTAG+AGG | 0.579023 | 1.4:-15155017 | MS.gene026637:CDS |
| AGCAATGATTGCTGGACTTG+CGG | 0.580668 | 1.4:+15154355 | None:intergenic |
| GGTTGACTTCTTAGAAGCAG+AGG | 0.583228 | 1.4:-15154864 | MS.gene026637:CDS |
| AACTGGCGGAAGAGTTTGAA+AGG | 0.585732 | 1.4:-15154898 | MS.gene026637:CDS |
| AGAAAATCGCCTAATGAGCA+TGG | 0.586480 | 1.4:-15155230 | MS.gene026637:CDS |
| GCAATCATTGCTCATGCGGG+TGG | 0.586991 | 1.4:-15154344 | MS.gene026637:CDS |
| AAGGAAGAAAATCTAACTGA+CGG | 0.586993 | 1.4:-15156927 | MS.gene026637:CDS |
| AATAGCAATTTCTTCAGACA+TGG | 0.587597 | 1.4:+15154826 | None:intergenic |
| AGAATACTTCTCAGAATGAG+AGG | 0.588629 | 1.4:+15158003 | None:intergenic |
| AATTGGAGGAAGAGATACTC+AGG | 0.589915 | 1.4:-15154793 | MS.gene026637:CDS |
| TGTTAATATACCGAATGGAA+AGG | 0.591354 | 1.4:-15156946 | MS.gene026637:CDS |
| GAGAGATTCAACGCAAAATG+AGG | 0.592680 | 1.4:+15155777 | None:intergenic |
| TGTCTTCAACCTCCGACACT+CGG | 0.593276 | 1.4:+15155834 | None:intergenic |
| TGGAGAAAAGAAAATCAAGC+AGG | 0.595873 | 1.4:-15154753 | MS.gene026637:intron |
| ACCAAGTTGTTCTGACTCGT+GGG | 0.598380 | 1.4:-15155668 | MS.gene026637:CDS |
| AAGCAGAGGTTGAAAAGGAG+AGG | 0.601507 | 1.4:-15154850 | MS.gene026637:CDS |
| GCAAAATGAGGATGAAGCAA+TGG | 0.602511 | 1.4:+15155789 | None:intergenic |
| AGCTTGAGTCCGAGTGTCGG+AGG | 0.604913 | 1.4:-15155843 | MS.gene026637:CDS |
| TCCAGCAATCATTGCTCATG+CGG | 0.605279 | 1.4:-15154348 | MS.gene026637:CDS |
| ATATGCGTCAAAAGGTTGAA+TGG | 0.606983 | 1.4:-15156011 | MS.gene026637:CDS |
| GAAATTGCAATAAAATGTGA+GGG | 0.607539 | 1.4:-15155025 | MS.gene026637:CDS |
| TGATCTAAATGACGGGTCAG+TGG | 0.607812 | 1.4:-15157072 | MS.gene026637:CDS |
| CAATGACAGATAAGAAGAGA+TGG | 0.610227 | 1.4:-15158087 | MS.gene026637:CDS |
| GGTCGACTTATTAGAAGCAG+AGG | 0.614728 | 1.4:-15155179 | MS.gene026637:CDS |
| AGATCTAAATGACAGGTCAA+GGG | 0.615345 | 1.4:-15156997 | MS.gene026637:CDS |
| GGCTGCGTCAGACGAAATTG+CGG | 0.615682 | 1.4:-15154933 | MS.gene026637:CDS |
| TACGGAGAGGCTAACTGCGG+TGG | 0.617100 | 1.4:-15155734 | MS.gene026637:CDS |
| CATAAATGGTGGTTCATCAG+AGG | 0.620066 | 1.4:-15157138 | MS.gene026637:CDS |
| AGAACTGGCGTGATTTGGCA+AGG | 0.622883 | 1.4:+15154172 | None:intergenic |
| CTTTGTCGCAAGAAATTGCG+AGG | 0.632365 | 1.4:-15155141 | MS.gene026637:CDS |
| TCAGGAGGACCTAGCACTCG+CGG | 0.635445 | 1.4:-15154480 | MS.gene026637:intron |
| GTTTGAAAGGAAATGTGCGA+AGG | 0.637081 | 1.4:-15154885 | MS.gene026637:CDS |
| AATCACGCCAGTTCTGAGAA+GGG | 0.639029 | 1.4:-15154164 | MS.gene026637:CDS |
| CTCATGCGGGTGGAGAGATG+TGG | 0.640653 | 1.4:-15154334 | MS.gene026637:CDS |
| GCCCACGAGTCAGAACAACT+TGG | 0.642821 | 1.4:+15155667 | None:intergenic |
| AAGCCGACGTTGATAAGGAG+AGG | 0.644803 | 1.4:-15155060 | MS.gene026637:CDS |
| ACTTCTTCTAGGTTGGCTGA+CGG | 0.645634 | 1.4:-15154269 | MS.gene026637:CDS |
| GTCACATCTTCAGTTAAAGG+AGG | 0.646496 | 1.4:-15155317 | MS.gene026637:CDS |
| GGAGGCAGTTCAGAAATTGG+AGG | 0.651234 | 1.4:-15155299 | MS.gene026637:CDS |
| TTTAAAGAAGAAACTTGACA+TGG | 0.658460 | 1.4:-15156265 | MS.gene026637:CDS |
| CCAAGCTTGAGTCCGAGTGT+CGG | 0.663975 | 1.4:-15155846 | MS.gene026637:CDS |
| ACTACATGCATCATAAATGG+TGG | 0.667278 | 1.4:-15157149 | MS.gene026637:CDS |
| ATGCGGGTGGAGAGATGTGG+AGG | 0.668639 | 1.4:-15154331 | MS.gene026637:CDS |
| GGCCAAGTGTAAGGAACTGG+CGG | 0.672251 | 1.4:-15154912 | MS.gene026637:CDS |
| GTTCCTCTCCTTATCAACGT+CGG | 0.677034 | 1.4:+15155057 | None:intergenic |
| GTCAGTCAGACAGTACGGAG+AGG | 0.705314 | 1.4:-15155747 | MS.gene026637:CDS |
| AGAAAACAATAGCATCTTTG+GGG | 0.712210 | 1.4:-15154436 | MS.gene026637:CDS |
| GTTCTTAGTCTCGGGCAATG+CGG | 0.727474 | 1.4:+15155525 | None:intergenic |
| GAGGAAGTGTAAGGACCTGG+AGG | 0.738472 | 1.4:-15155122 | MS.gene026637:CDS |
| AAATCGCCTAATGAGCATGG+AGG | 0.744978 | 1.4:-15155227 | MS.gene026637:CDS |
| CAGTACGGAGAGGCTAACTG+CGG | 0.752055 | 1.4:-15155737 | MS.gene026637:CDS |
| ATGAATGGTTCGGAAAACAG+GGG | 0.762929 | 1.4:-15155694 | MS.gene026637:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATTTATTTCATAAAAAT+AGG | - | chr1.4:15157512-15157531 | MS.gene026637:intron | 10.0% |
| !!! | TTAGAATTATTTTTTTACAT+TGG | - | chr1.4:15155759-15155778 | MS.gene026637:CDS | 10.0% |
| !! | ATTTCATAAAAATAGGTTAT+TGG | - | chr1.4:15157519-15157538 | MS.gene026637:intron | 15.0% |
| !! | TGTCATAATAATATAGTAAT+AGG | - | chr1.4:15154515-15154534 | MS.gene026637:intron | 15.0% |
| !!! | GAAAGTATTTTTTTATCATT+AGG | - | chr1.4:15154741-15154760 | MS.gene026637:intron | 15.0% |
| !!! | GTTATATTTTGCTTTTATTT+TGG | - | chr1.4:15157585-15157604 | MS.gene026637:intron | 15.0% |
| !!! | TTTTTCCTTATATTTGAAAT+CGG | - | chr1.4:15157623-15157642 | MS.gene026637:intron | 15.0% |
| !! | AATAACATCCAAGATATTAT+AGG | - | chr1.4:15157544-15157563 | MS.gene026637:intron | 20.0% |
| !! | ATATCAAACCTATAATATCT+TGG | + | chr1.4:15157555-15157574 | None:intergenic | 20.0% |
| !! | TTATGTAGAACATATTTACA+CGG | + | chr1.4:15154397-15154416 | None:intergenic | 20.0% |
| !! | TTGAATTTCAATTTCATGTA+TGG | - | chr1.4:15154271-15154290 | MS.gene026637:CDS | 20.0% |
| ! | AAAAAGATGATCTAAATGAC+GGG | - | chr1.4:15155109-15155128 | MS.gene026637:CDS | 25.0% |
| ! | CAAGCATAACTAAAAAAATG+TGG | + | chr1.4:15154562-15154581 | None:intergenic | 25.0% |
| ! | CTCAATAAGACTACAAAAAA+GGG | + | chr1.4:15155851-15155870 | None:intergenic | 25.0% |
| ! | GAAAAAGATGATCTAAATGA+CGG | - | chr1.4:15155108-15155127 | MS.gene026637:CDS | 25.0% |
| ! | GAAATTGCAATAAAATGTGA+GGG | - | chr1.4:15157163-15157182 | MS.gene026637:CDS | 25.0% |
| ! | GCCTAAGCAAATAAATAAAA+AGG | + | chr1.4:15155874-15155893 | None:intergenic | 25.0% |
| ! | GCTATTGTTAATATATCGAA+TGG | - | chr1.4:15155162-15155181 | MS.gene026637:CDS | 25.0% |
| ! | TAGGTTTGATATCATTAACT+AGG | - | chr1.4:15157563-15157582 | MS.gene026637:intron | 25.0% |
| ! | TGAAATTGCAATAAAATGTG+AGG | - | chr1.4:15157162-15157181 | MS.gene026637:CDS | 25.0% |
| ! | TTCTCTTAAAATAGATCTGA+TGG | - | chr1.4:15156613-15156632 | MS.gene026637:intron | 25.0% |
| ! | TTCTTCCGATTTCAAATATA+AGG | + | chr1.4:15157631-15157650 | None:intergenic | 25.0% |
| ! | TTTAAAGAAGAAACTTGACA+TGG | - | chr1.4:15155923-15155942 | MS.gene026637:CDS | 25.0% |
| ! | TTTATTTATTTGCTTAGGCT+GGG | - | chr1.4:15155875-15155894 | MS.gene026637:CDS | 25.0% |
| ! | TTTCTATGAAGTATAGTTTG+AGG | + | chr1.4:15157496-15157515 | None:intergenic | 25.0% |
| !! | AAGAAATTGCTATTAAGTGT+AGG | - | chr1.4:15157371-15157390 | MS.gene026637:intron | 25.0% |
| !! | AGAAATTGCTATTAAGTGTA+GGG | - | chr1.4:15157372-15157391 | MS.gene026637:intron | 25.0% |
| !! | CTATTGTTTTCTGTAATTCT+CGG | - | chr1.4:15155417-15155436 | MS.gene026637:CDS | 25.0% |
| !!! | GCCTTTTTATTTATTTGCTT+AGG | - | chr1.4:15155870-15155889 | MS.gene026637:CDS | 25.0% |
| !!! | TCTATTTTAAGAGAACTTGA+TGG | + | chr1.4:15156608-15156627 | None:intergenic | 25.0% |
| !!! | TTTTATTTATTTGCTTAGGC+TGG | - | chr1.4:15155874-15155893 | MS.gene026637:CDS | 25.0% |
| AAAAAAGGGAGAAAAAGAAG+AGG | + | chr1.4:15155837-15155856 | None:intergenic | 30.0% | |
| AAAAATCAGAACTGTTGAGA+GGG | - | chr1.4:15156256-15156275 | MS.gene026637:CDS | 30.0% | |
| AAGGAAGAAAATCTAACTGA+CGG | - | chr1.4:15155261-15155280 | MS.gene026637:CDS | 30.0% | |
| AATAGCAATTTCTTCAGACA+TGG | + | chr1.4:15157365-15157384 | None:intergenic | 30.0% | |
| ACAATAGTAACTTCGTAACT+TGG | + | chr1.4:15154323-15154342 | None:intergenic | 30.0% | |
| AGAAAACAATAGCATCTTTG+GGG | - | chr1.4:15157752-15157771 | MS.gene026637:intron | 30.0% | |
| AGCAAATGGATGAACTAAAA+GGG | - | chr1.4:15156774-15156793 | MS.gene026637:intron | 30.0% | |
| ATATCCAAGAAAGGATAGAA+TGG | + | chr1.4:15155476-15155495 | None:intergenic | 30.0% | |
| ATCACGTTCAATAGAAGATT+TGG | + | chr1.4:15156159-15156178 | None:intergenic | 30.0% | |
| ATTACCATTCTATCCTTTCT+TGG | - | chr1.4:15155469-15155488 | MS.gene026637:CDS | 30.0% | |
| ATTCTTGAATTGATCAAGCT+CGG | + | chr1.4:15156561-15156580 | None:intergenic | 30.0% | |
| CAAACAATATATCCAGGAAA+TGG | + | chr1.4:15155810-15155829 | None:intergenic | 30.0% | |
| CAATTACGATATCATCAGAT+TGG | + | chr1.4:15154351-15154370 | None:intergenic | 30.0% | |
| CAGAAAACAATAGCATCTTT+GGG | - | chr1.4:15157751-15157770 | MS.gene026637:intron | 30.0% | |
| GAAAAGAAGATCTAAATGAC+AGG | - | chr1.4:15155184-15155203 | MS.gene026637:CDS | 30.0% | |
| GAAAGATTATCTGTGTTCTT+TGG | - | chr1.4:15154221-15154240 | MS.gene026637:CDS | 30.0% | |
| GCTATTGTTAATATACCGAA+TGG | - | chr1.4:15155237-15155256 | MS.gene026637:CDS | 30.0% | |
| GCTCAATAAGACTACAAAAA+AGG | + | chr1.4:15155852-15155871 | None:intergenic | 30.0% | |
| GTATCAAAGGAATCTTCTAA+TGG | - | chr1.4:15154901-15154920 | MS.gene026637:CDS | 30.0% | |
| GTTAGAATCAGAGATTGTTA+AGG | - | chr1.4:15157228-15157247 | MS.gene026637:CDS | 30.0% | |
| TAAAAATCAGAACTGTTGAG+AGG | - | chr1.4:15156255-15156274 | MS.gene026637:CDS | 30.0% | |
| TATCAACACATATCCAAGAA+AGG | + | chr1.4:15155485-15155504 | None:intergenic | 30.0% | |
| TATCTTTCCTAGAATTGTTC+AGG | - | chr1.4:15154693-15154712 | MS.gene026637:intron | 30.0% | |
| TGTTAATATACCGAATGGAA+AGG | - | chr1.4:15155242-15155261 | MS.gene026637:CDS | 30.0% | |
| TGTTATTAACATACCTGCTA+TGG | + | chr1.4:15155382-15155401 | None:intergenic | 30.0% | |
| TTATCATTAGGAGTCAAACT+CGG | - | chr1.4:15154753-15154772 | MS.gene026637:intron | 30.0% | |
| TTCTTTGTCAACGCATTTAT+CGG | + | chr1.4:15156720-15156739 | None:intergenic | 30.0% | |
| ! | AGATTTTCTTCCTTTCCATT+CGG | + | chr1.4:15155255-15155274 | None:intergenic | 30.0% |
| ! | ATCCTTTTGAATATAGCTAC+TGG | - | chr1.4:15154419-15154438 | MS.gene026637:CDS | 30.0% |
| ! | CATTTGATCTTTTCTATGTC+AGG | - | chr1.4:15157690-15157709 | MS.gene026637:intron | 30.0% |
| ! | TCCTTTTGAATATAGCTACT+GGG | - | chr1.4:15154420-15154439 | MS.gene026637:CDS | 30.0% |
| ! | TTGAAGCATCTAATTTCTTC+TGG | + | chr1.4:15156133-15156152 | None:intergenic | 30.0% |
| !! | TATCGTTTGCTTTGATTTGT+AGG | + | chr1.4:15156939-15156958 | None:intergenic | 30.0% |
| AAAAGGGAAGTTAGAGAAAG+TGG | - | chr1.4:15156790-15156809 | MS.gene026637:intron | 35.0% | |
| AAGATCTAAATGACAGGTCA+AGG | - | chr1.4:15155190-15155209 | MS.gene026637:CDS | 35.0% | |
| AATAAAATGTGAGGGTCTAG+AGG | - | chr1.4:15157171-15157190 | MS.gene026637:CDS | 35.0% | |
| AATCAGAGATTGTTAAGGAG+AGG | - | chr1.4:15157233-15157252 | MS.gene026637:CDS | 35.0% | |
| ACCCAGTAGCTATATTCAAA+AGG | + | chr1.4:15154424-15154443 | None:intergenic | 35.0% | |
| ACTACATGCATCATAAATGG+TGG | - | chr1.4:15155039-15155058 | MS.gene026637:CDS | 35.0% | |
| ACTTCTTCCTGAACAATTCT+AGG | + | chr1.4:15154703-15154722 | None:intergenic | 35.0% | |
| AGAATACTTCTCAGAATGAG+AGG | + | chr1.4:15154188-15154207 | None:intergenic | 35.0% | |
| AGATCTAAATGACAGGTCAA+GGG | - | chr1.4:15155191-15155210 | MS.gene026637:CDS | 35.0% | |
| AGCTTTCCTCATATTTGTTC+AGG | + | chr1.4:15157960-15157979 | None:intergenic | 35.0% | |
| AGGAAGAAAATCTAACTGAC+GGG | - | chr1.4:15155262-15155281 | MS.gene026637:CDS | 35.0% | |
| AGGAAGAAGTTATCGCTTAA+CGG | - | chr1.4:15154713-15154732 | MS.gene026637:intron | 35.0% | |
| AGTTAGGTTAGGACTTAGAT+AGG | - | chr1.4:15155651-15155670 | MS.gene026637:CDS | 35.0% | |
| ATATGCGTCAAAAGGTTGAA+TGG | - | chr1.4:15156177-15156196 | MS.gene026637:CDS | 35.0% | |
| ATCAGAGATTGTTAAGGAGA+GGG | - | chr1.4:15157234-15157253 | MS.gene026637:CDS | 35.0% | |
| ATGAGGAGAAACTTAGGATT+TGG | + | chr1.4:15155625-15155644 | None:intergenic | 35.0% | |
| ATGATGCATGTAGTAGGTAA+AGG | + | chr1.4:15155033-15155052 | None:intergenic | 35.0% | |
| CAGATAAGAAGAGATGGTTA+TGG | - | chr1.4:15154107-15154126 | MS.gene026637:CDS | 35.0% | |
| CAGCAAATGGATGAACTAAA+AGG | - | chr1.4:15156773-15156792 | MS.gene026637:intron | 35.0% | |
| CCAGAAAACAATAGCATCTT+TGG | - | chr1.4:15157750-15157769 | MS.gene026637:intron | 35.0% | |
| CCATTTATGAGGAGAAACTT+AGG | + | chr1.4:15155631-15155650 | None:intergenic | 35.0% | |
| CCATTTATGATGCATGTAGT+AGG | + | chr1.4:15155039-15155058 | None:intergenic | 35.0% | |
| CCTAAGTTTCTCCTCATAAA+TGG | - | chr1.4:15155628-15155647 | MS.gene026637:CDS | 35.0% | |
| CCTACTACATGCATCATAAA+TGG | - | chr1.4:15155036-15155055 | MS.gene026637:CDS | 35.0% | |
| CGATTCAAGACCAATTCTTT+CGG | + | chr1.4:15154637-15154656 | None:intergenic | 35.0% | |
| CTAACCTAACTCCATTTATG+AGG | + | chr1.4:15155642-15155661 | None:intergenic | 35.0% | |
| CTCATAAATGGAGTTAGGTT+AGG | - | chr1.4:15155640-15155659 | MS.gene026637:CDS | 35.0% | |
| CTGTTTAACCAAGTCTTCTT+TGG | + | chr1.4:15155337-15155356 | None:intergenic | 35.0% | |
| GAAAAGAAAATCAAGCAGGT+TGG | - | chr1.4:15157439-15157458 | MS.gene026637:intron | 35.0% | |
| GCTTTCCTCATATTTGTTCA+GGG | + | chr1.4:15157959-15157978 | None:intergenic | 35.0% | |
| GGTAGATGAAAATGGAGAAA+AGG | - | chr1.4:15155071-15155090 | MS.gene026637:CDS | 35.0% | |
| GTTAGGTTAGGACTTAGATA+GGG | - | chr1.4:15155652-15155671 | MS.gene026637:CDS | 35.0% | |
| GTTTGTATGATTCCATTTCC+TGG | - | chr1.4:15155795-15155814 | MS.gene026637:CDS | 35.0% | |
| TATCCTCAAGATGAATGGTT+CGG | - | chr1.4:15156484-15156503 | MS.gene026637:intron | 35.0% | |
| TATTAAGTGTAGGGAATTGG+AGG | - | chr1.4:15157381-15157400 | MS.gene026637:intron | 35.0% | |
| TCAGAAAAGACCGAAAGAAT+TGG | - | chr1.4:15154624-15154643 | MS.gene026637:intron | 35.0% | |
| TCATCAGAGGTAGATGAAAA+TGG | - | chr1.4:15155063-15155082 | MS.gene026637:CDS | 35.0% | |
| TGCTATTAAGTGTAGGGAAT+TGG | - | chr1.4:15157378-15157397 | MS.gene026637:intron | 35.0% | |
| TGGAGAAAAGAAAATCAAGC+AGG | - | chr1.4:15157435-15157454 | MS.gene026637:intron | 35.0% | |
| TGTGATATCCTCAAGATGAA+TGG | - | chr1.4:15156479-15156498 | MS.gene026637:intron | 35.0% | |
| TGTGATTGAAACTTGAAAGC+AGG | - | chr1.4:15154876-15154895 | MS.gene026637:CDS | 35.0% | |
| TTCTCCTCATAAATGGAGTT+AGG | - | chr1.4:15155635-15155654 | MS.gene026637:CDS | 35.0% | |
| TTTCATGTATGGAAAACACG+AGG | - | chr1.4:15154282-15154301 | MS.gene026637:CDS | 35.0% | |
| ! | CCAAAGATGCTATTGTTTTC+TGG | + | chr1.4:15157753-15157772 | None:intergenic | 35.0% |
| ! | GAAAAGTGAAGAGTGTATTG+AGG | - | chr1.4:15156847-15156866 | MS.gene026637:CDS | 35.0% |
| ! | TTGATCTTTTCTATGTCAGG+AGG | - | chr1.4:15157693-15157712 | MS.gene026637:intron | 35.0% |
| !! | AGATCTGATGGATGATTTTC+TGG | - | chr1.4:15156625-15156644 | MS.gene026637:intron | 35.0% |
| !! | AGGTGTTGATGCAATTTCAT+CGG | + | chr1.4:15155013-15155032 | None:intergenic | 35.0% |
| !! | ATTAGAAGCAGAGGTTGATA+AGG | - | chr1.4:15157018-15157037 | MS.gene026637:CDS | 35.0% |
| !! | CGAAAGAATTGGTCTTGAAT+CGG | - | chr1.4:15154635-15154654 | MS.gene026637:intron | 35.0% |
| !! | GATGGATGATTTTCTGGAAA+TGG | - | chr1.4:15156631-15156650 | MS.gene026637:intron | 35.0% |
| !! | GGATATGTGTTGATAATGTG+CGG | - | chr1.4:15155490-15155509 | MS.gene026637:CDS | 35.0% |
| !! | TGAGAAGTATTCTGATGAAC+AGG | - | chr1.4:15154195-15154214 | MS.gene026637:CDS | 35.0% |
| !! | TGCTATTGTTTTCTGGCATT+CGG | + | chr1.4:15157746-15157765 | None:intergenic | 35.0% |
| !! | TTGAAAGCAGGAAGTATCAA+AGG | - | chr1.4:15154888-15154907 | MS.gene026637:CDS | 35.0% |
| !!! | TTTGGATTTTTTGCAGTCAC+TGG | + | chr1.4:15155607-15155626 | None:intergenic | 35.0% |
| AAAGGAGGCAGTTCAGAAAT+TGG | - | chr1.4:15156886-15156905 | MS.gene026637:CDS | 40.0% | |
| AAGAAAAAAGCAGAGTGTGC+AGG | + | chr1.4:15154834-15154853 | None:intergenic | 40.0% | |
| AAGGGAGAAAAAGAAGAGGA+TGG | + | chr1.4:15155833-15155852 | None:intergenic | 40.0% | |
| AATTGGAGGAAGAGATACTC+AGG | - | chr1.4:15157395-15157414 | MS.gene026637:intron | 40.0% | |
| AGAAAAAAGCAGAGTGTGCA+GGG | + | chr1.4:15154833-15154852 | None:intergenic | 40.0% | |
| AGAAAATCGCCTAATGAGCA+TGG | - | chr1.4:15156958-15156977 | MS.gene026637:CDS | 40.0% | |
| AGATAGTCAGTCAGACAGTA+CGG | - | chr1.4:15156436-15156455 | MS.gene026637:intron | 40.0% | |
| ATATTTGTTCAGGGATGCAC+CGG | + | chr1.4:15157950-15157969 | None:intergenic | 40.0% | |
| ATCATCAACATCTTCAGCAC+AGG | + | chr1.4:15154965-15154984 | None:intergenic | 40.0% | |
| ATGGTTGGAGACAGAGAATA+TGG | - | chr1.4:15156196-15156215 | MS.gene026637:CDS | 40.0% | |
| ATGTGGAGGATGCATTCAAA+TGG | - | chr1.4:15157871-15157890 | MS.gene026637:intron | 40.0% | |
| ATTAGAAGCCGACGTTGATA+AGG | - | chr1.4:15157123-15157142 | MS.gene026637:CDS | 40.0% | |
| ATTAGCTGCCGAATAATTCG+TGG | + | chr1.4:15155523-15155542 | None:intergenic | 40.0% | |
| CATAAATGGTGGTTCATCAG+AGG | - | chr1.4:15155050-15155069 | MS.gene026637:CDS | 40.0% | |
| CTTAGAAGCAGAGGTTGAAA+AGG | - | chr1.4:15157333-15157352 | MS.gene026637:intron | 40.0% | |
| GAAAGCAAATCTGCAATGCT+TGG | - | chr1.4:15157097-15157116 | MS.gene026637:CDS | 40.0% | |
| GAATGCTAGCAGTGTCAATA+AGG | + | chr1.4:15157813-15157832 | None:intergenic | 40.0% | |
| GAGAGATTCAACGCAAAATG+AGG | + | chr1.4:15156414-15156433 | None:intergenic | 40.0% | |
| GATAGAGTCACTCATCTAGA+TGG | - | chr1.4:15155972-15155991 | MS.gene026637:CDS | 40.0% | |
| GCAAAATGAGGATGAAGCAA+TGG | + | chr1.4:15156402-15156421 | None:intergenic | 40.0% | |
| GGAGTCACATCTTCAGTTAA+AGG | - | chr1.4:15156868-15156887 | MS.gene026637:CDS | 40.0% | |
| GGATGGCAAACAATATATCC+AGG | + | chr1.4:15155816-15155835 | None:intergenic | 40.0% | |
| GTAGAAGAAGACGATGAAAG+TGG | + | chr1.4:15157985-15158004 | None:intergenic | 40.0% | |
| GTCACATCTTCAGTTAAAGG+AGG | - | chr1.4:15156871-15156890 | MS.gene026637:CDS | 40.0% | |
| GTGAATCTGGTACATTGTCT+GGG | + | chr1.4:15154481-15154500 | None:intergenic | 40.0% | |
| GTTTGAAAGGAAATGTGCGA+AGG | - | chr1.4:15157303-15157322 | MS.gene026637:intron | 40.0% | |
| TATTTGCTTAGGCTGGGAAA+AGG | - | chr1.4:15155881-15155900 | MS.gene026637:CDS | 40.0% | |
| TGAACGTGATATGCGTCAAA+AGG | - | chr1.4:15156169-15156188 | MS.gene026637:CDS | 40.0% | |
| TGAATCTGGTACATTGTCTG+GGG | + | chr1.4:15154480-15154499 | None:intergenic | 40.0% | |
| TGACATCATGACTCAGCAAA+TGG | - | chr1.4:15156760-15156779 | MS.gene026637:intron | 40.0% | |
| TGCATCCCTGAACAAATATG+AGG | - | chr1.4:15157951-15157970 | MS.gene026637:intron | 40.0% | |
| TGCTTCTAATAAGTCGACCT+TGG | + | chr1.4:15157008-15157027 | None:intergenic | 40.0% | |
| TGTCAATGCCAAAGAAGACT+TGG | - | chr1.4:15155326-15155345 | MS.gene026637:CDS | 40.0% | |
| TTTCCGAACCATTCATCTTG+AGG | + | chr1.4:15156490-15156509 | None:intergenic | 40.0% | |
| ! | AACTTGATGGATCAGCTTGT+CGG | + | chr1.4:15156595-15156614 | None:intergenic | 40.0% |
| ! | AGAAATTGCGAGGAAGTGTA+AGG | - | chr1.4:15157057-15157076 | MS.gene026637:CDS | 40.0% |
| ! | AGATGAATGGTTCGGAAAAC+AGG | - | chr1.4:15156492-15156511 | MS.gene026637:intron | 40.0% |
| ! | ATGAATGGTTCGGAAAACAG+GGG | - | chr1.4:15156494-15156513 | MS.gene026637:intron | 40.0% |
| ! | GATGAATGGTTCGGAAAACA+GGG | - | chr1.4:15156493-15156512 | MS.gene026637:intron | 40.0% |
| ! | TCATCTAGATGGAGCACTTA+AGG | - | chr1.4:15155983-15156002 | MS.gene026637:CDS | 40.0% |
| ! | TGTGTGAGTATTGTAAACCC+CGG | + | chr1.4:15154783-15154802 | None:intergenic | 40.0% |
| ! | TTCCAATTCGCGAGTCTTTT+CGG | + | chr1.4:15156072-15156091 | None:intergenic | 40.0% |
| !! | AAGCAGAGGTTGATAAGGAA+AGG | - | chr1.4:15157023-15157042 | MS.gene026637:CDS | 40.0% |
| !! | AGCAGAGGTTGATAAGGAAA+GGG | - | chr1.4:15157024-15157043 | MS.gene026637:CDS | 40.0% |
| !! | GGACGAGATTCTAGTTCAAT+CGG | - | chr1.4:15156226-15156245 | MS.gene026637:CDS | 40.0% |
| !! | GGTGTTGATGCAATTTCATC+GGG | + | chr1.4:15155012-15155031 | None:intergenic | 40.0% |
| !!! | TACAGCTTTTGAGGTGACAT+CGG | + | chr1.4:15154941-15154960 | None:intergenic | 40.0% |
| AAATCGCCTAATGAGCATGG+AGG | - | chr1.4:15156961-15156980 | MS.gene026637:CDS | 45.0% | |
| AACTGGCGGAAGAGTTTGAA+AGG | - | chr1.4:15157290-15157309 | MS.gene026637:CDS | 45.0% | |
| AACTTGACATGGTCACTCTC+AGG | - | chr1.4:15155934-15155953 | MS.gene026637:CDS | 45.0% | |
| AAGCAGAGGTTGAAAAGGAG+AGG | - | chr1.4:15157338-15157357 | MS.gene026637:intron | 45.0% | |
| AATTCGACCCTTCTCAGAAC+TGG | + | chr1.4:15158034-15158053 | None:intergenic | 45.0% | |
| ACACAAGTGGTTAGTGCACA+AGG | + | chr1.4:15154806-15154825 | None:intergenic | 45.0% | |
| ACTAGCTGTCTCAGCTACTT+GGG | + | chr1.4:15156291-15156310 | None:intergenic | 45.0% | |
| AGACAGAGAATATGGCTCTC+AGG | - | chr1.4:15156204-15156223 | MS.gene026637:CDS | 45.0% | |
| AGACTCCACTTCTTCTAGGT+TGG | - | chr1.4:15157912-15157931 | MS.gene026637:intron | 45.0% | |
| AGAGAGACTCCACTTCTTCT+AGG | - | chr1.4:15157908-15157927 | MS.gene026637:intron | 45.0% | |
| AGCAATGATTGCTGGACTTG+CGG | + | chr1.4:15157836-15157855 | None:intergenic | 45.0% | |
| AGCAGAGGTTGAAAAGGAGA+GGG | - | chr1.4:15157339-15157358 | MS.gene026637:intron | 45.0% | |
| AGGAGTCAAACTCGGTAATC+CGG | - | chr1.4:15154761-15154780 | MS.gene026637:CDS | 45.0% | |
| CGTGAATCTGGTACATTGTC+TGG | + | chr1.4:15154482-15154501 | None:intergenic | 45.0% | |
| CTTTGTCGCAAGAAATTGCG+AGG | - | chr1.4:15157047-15157066 | MS.gene026637:CDS | 45.0% | |
| GAAATCTCTGGCTACACTTG+AGG | - | chr1.4:15157783-15157802 | MS.gene026637:intron | 45.0% | |
| GAAGAAGTGGAGTCTCTCTT+AGG | + | chr1.4:15157907-15157926 | None:intergenic | 45.0% | |
| GAATCTGGTACATTGTCTGG+GGG | + | chr1.4:15154479-15154498 | None:intergenic | 45.0% | |
| GACAGAGAATATGGCTCTCA+GGG | - | chr1.4:15156205-15156224 | MS.gene026637:CDS | 45.0% | |
| GCGTCAAAAGGTTGAATGGT+TGG | - | chr1.4:15156181-15156200 | MS.gene026637:CDS | 45.0% | |
| GGAAGGTGAATTCAGTAGCA+GGG | + | chr1.4:15154458-15154477 | None:intergenic | 45.0% | |
| GTGCGTGTCCACGAATTATT+CGG | - | chr1.4:15155512-15155531 | MS.gene026637:CDS | 45.0% | |
| GTTCCTCTCCTTATCAACGT+CGG | + | chr1.4:15157134-15157153 | None:intergenic | 45.0% | |
| TACTAGCTGTCTCAGCTACT+TGG | + | chr1.4:15156292-15156311 | None:intergenic | 45.0% | |
| TCCAGCAATCATTGCTCATG+CGG | - | chr1.4:15157840-15157859 | MS.gene026637:intron | 45.0% | |
| TCTCCATACAAGCTAGCTGT+TGG | + | chr1.4:15157421-15157440 | None:intergenic | 45.0% | |
| TGCTTGCTTTCTGTAACGTC+TGG | - | chr1.4:15155557-15155576 | MS.gene026637:CDS | 45.0% | |
| TGCTTTCTAACTCTTCCTCC+AGG | + | chr1.4:15157084-15157103 | None:intergenic | 45.0% | |
| TTCTAGCCGAATACCACTCT+TGG | + | chr1.4:15158082-15158101 | None:intergenic | 45.0% | |
| TTCTCAGAACTGGCGTGATT+TGG | + | chr1.4:15158024-15158043 | None:intergenic | 45.0% | |
| ! | AAAATCTAACTGACGGGTCG+AGG | - | chr1.4:15155268-15155287 | MS.gene026637:CDS | 45.0% |
| ! | AAATCTAACTGACGGGTCGA+GGG | - | chr1.4:15155269-15155288 | MS.gene026637:CDS | 45.0% |
| ! | AACCAAGTTGTTCTGACTCG+TGG | - | chr1.4:15156519-15156538 | MS.gene026637:intron | 45.0% |
| ! | AAGTCTTCTGAGAAGAGTCC+AGG | - | chr1.4:15154136-15154155 | MS.gene026637:CDS | 45.0% |
| ! | ACCAAGTTGTTCTGACTCGT+GGG | - | chr1.4:15156520-15156539 | MS.gene026637:intron | 45.0% |
| ! | ACTTCTTCTAGGTTGGCTGA+CGG | - | chr1.4:15157919-15157938 | MS.gene026637:intron | 45.0% |
| ! | GGTCGACTTATTAGAAGCAG+AGG | - | chr1.4:15157009-15157028 | MS.gene026637:CDS | 45.0% |
| ! | GGTTGACTTCTTAGAAGCAG+AGG | - | chr1.4:15157324-15157343 | MS.gene026637:intron | 45.0% |
| ! | TTTTTCTCGCGAACCAAGAG+TGG | - | chr1.4:15158066-15158085 | MS.gene026637:CDS | 45.0% |
| ! | TTTTTGCAGTCACTGGTGAG+TGG | + | chr1.4:15155600-15155619 | None:intergenic | 45.0% |
| !! | AAATCACGCCAGTTCTGAGA+AGG | - | chr1.4:15158023-15158042 | MS.gene026637:CDS | 45.0% |
| !! | AAGCAGCTTTGTTGAGGAGT+TGG | - | chr1.4:15156688-15156707 | MS.gene026637:intron | 45.0% |
| !! | AATCACGCCAGTTCTGAGAA+GGG | - | chr1.4:15158024-15158043 | MS.gene026637:CDS | 45.0% |
| !! | AGTTCTGAGAAGGGTCGAAT+TGG | - | chr1.4:15158033-15158052 | MS.gene026637:CDS | 45.0% |
| !! | TACTCGCTTTTGCGTGAATC+TGG | + | chr1.4:15154494-15154513 | None:intergenic | 45.0% |
| !! | TGATCTAAATGACGGGTCAG+TGG | - | chr1.4:15155116-15155135 | MS.gene026637:CDS | 45.0% |
| !!! | ACAGCTTTTGAGGTGACATC+GGG | + | chr1.4:15154940-15154959 | None:intergenic | 45.0% |
| AGCCGAAAAGACTCGCGAAT+TGG | - | chr1.4:15156067-15156086 | MS.gene026637:CDS | 50.0% | |
| AGTCTGCCTCCATGCTCATT+AGG | + | chr1.4:15156970-15156989 | None:intergenic | 50.0% | |
| CCAGCAATCATTGCTCATGC+GGG | - | chr1.4:15157841-15157860 | MS.gene026637:intron | 50.0% | |
| CGAAATTGCGGCCAAGTGTA+AGG | - | chr1.4:15157267-15157286 | MS.gene026637:CDS | 50.0% | |
| CGCGAACCAAGAGTGGTATT+CGG | - | chr1.4:15158073-15158092 | MS.gene026637:CDS | 50.0% | |
| CTCTCACACGCTATCTTCCA+AGG | - | chr1.4:15156988-15157007 | MS.gene026637:CDS | 50.0% | |
| CTGCTTGCGTTCTTAGTCTC+GGG | + | chr1.4:15156674-15156693 | None:intergenic | 50.0% | |
| GAGTCAAACTCGGTAATCCG+GGG | - | chr1.4:15154763-15154782 | MS.gene026637:CDS | 50.0% | |
| GCAATGATTGCTGGACTTGC+GGG | + | chr1.4:15157835-15157854 | None:intergenic | 50.0% | |
| GCTGCTTGCGTTCTTAGTCT+CGG | + | chr1.4:15156675-15156694 | None:intergenic | 50.0% | |
| GGAGGCAGTTCAGAAATTGG+AGG | - | chr1.4:15156889-15156908 | MS.gene026637:CDS | 50.0% | |
| GGAGTCAAACTCGGTAATCC+GGG | - | chr1.4:15154762-15154781 | MS.gene026637:CDS | 50.0% | |
| GGGAAGGTGAATTCAGTAGC+AGG | + | chr1.4:15154459-15154478 | None:intergenic | 50.0% | |
| GGGGAATCAGCTGAAATCTC+TGG | - | chr1.4:15157771-15157790 | MS.gene026637:intron | 50.0% | |
| GTCAGCCAACCTAGAAGAAG+TGG | + | chr1.4:15157920-15157939 | None:intergenic | 50.0% | |
| GTTCTTAGTCTCGGGCAATG+CGG | + | chr1.4:15156666-15156685 | None:intergenic | 50.0% | |
| GTTGCTGAAGAAGCCATAGC+AGG | - | chr1.4:15155366-15155385 | MS.gene026637:CDS | 50.0% | |
| TGTCTTCAACCTCCGACACT+CGG | + | chr1.4:15156357-15156376 | None:intergenic | 50.0% | |
| TGTGCAGGGTCTAACACAAG+TGG | + | chr1.4:15154819-15154838 | None:intergenic | 50.0% | |
| TTCCGCCAGTTCCTTACACT+TGG | + | chr1.4:15157281-15157300 | None:intergenic | 50.0% | |
| ! | AAGCCGACGTTGATAAGGAG+AGG | - | chr1.4:15157128-15157147 | MS.gene026637:CDS | 50.0% |
| ! | AGAACTGGCGTGATTTGGCA+AGG | + | chr1.4:15158019-15158038 | None:intergenic | 50.0% |
| ! | AGCACAGGCTACAGCTTTTG+AGG | + | chr1.4:15154950-15154969 | None:intergenic | 50.0% |
| ! | AGGCCAACAGCTAGCTTGTA+TGG | - | chr1.4:15157415-15157434 | MS.gene026637:intron | 50.0% |
| ! | GAGCACTTAAGGAGTGCGTT+AGG | - | chr1.4:15155994-15156013 | MS.gene026637:CDS | 50.0% |
| !! | GAACGCAAGCAGCTTTGTTG+AGG | - | chr1.4:15156682-15156701 | MS.gene026637:intron | 50.0% |
| CAGTACGGAGAGGCTAACTG+CGG | - | chr1.4:15156451-15156470 | MS.gene026637:intron | 55.0% | |
| CCAAGCTTGAGTCCGAGTGT+CGG | - | chr1.4:15156342-15156361 | MS.gene026637:intron | 55.0% | |
| CCAGGTGAAGCTGAGAGTTC+AGG | - | chr1.4:15154154-15154173 | MS.gene026637:CDS | 55.0% | |
| CCCGCATGAGCAATGATTGC+TGG | + | chr1.4:15157844-15157863 | None:intergenic | 55.0% | |
| CCTGAACTCTCAGCTTCACC+TGG | + | chr1.4:15154157-15154176 | None:intergenic | 55.0% | |
| CTGGCATTCGGCAAGCTTTC+CGG | + | chr1.4:15157734-15157753 | None:intergenic | 55.0% | |
| CTGGTACATTGTCTGGGGGA+AGG | + | chr1.4:15154475-15154494 | None:intergenic | 55.0% | |
| GCAATCATTGCTCATGCGGG+TGG | - | chr1.4:15157844-15157863 | MS.gene026637:intron | 55.0% | |
| GCCCACGAGTCAGAACAACT+TGG | + | chr1.4:15156524-15156543 | None:intergenic | 55.0% | |
| GGCCAAGTGTAAGGAACTGG+CGG | - | chr1.4:15157276-15157295 | MS.gene026637:CDS | 55.0% | |
| GGCTGCGTCAGACGAAATTG+CGG | - | chr1.4:15157255-15157274 | MS.gene026637:CDS | 55.0% | |
| GTCAGTCAGACAGTACGGAG+AGG | - | chr1.4:15156441-15156460 | MS.gene026637:intron | 55.0% | |
| TGCGGCCAAGTGTAAGGAAC+TGG | - | chr1.4:15157273-15157292 | MS.gene026637:CDS | 55.0% | |
| ! | GAGGAAGTGTAAGGACCTGG+AGG | - | chr1.4:15157066-15157085 | MS.gene026637:CDS | 55.0% |
| ! | TGCGAGGAAGTGTAAGGACC+TGG | - | chr1.4:15157063-15157082 | MS.gene026637:CDS | 55.0% |
| ATGCGGGTGGAGAGATGTGG+AGG | - | chr1.4:15157857-15157876 | MS.gene026637:intron | 60.0% | |
| CCGACACTCGGACTCAAGCT+TGG | + | chr1.4:15156345-15156364 | None:intergenic | 60.0% | |
| CTCATGCGGGTGGAGAGATG+TGG | - | chr1.4:15157854-15157873 | MS.gene026637:intron | 60.0% | |
| TACGGAGAGGCTAACTGCGG+TGG | - | chr1.4:15156454-15156473 | MS.gene026637:intron | 60.0% | |
| TCAGGAGGACCTAGCACTCG+CGG | - | chr1.4:15157708-15157727 | MS.gene026637:intron | 60.0% | |
| ! | AGGTTGGCTGACGGTAGCTC+CGG | - | chr1.4:15157928-15157947 | MS.gene026637:intron | 60.0% |
| !! | AGCTTGAGTCCGAGTGTCGG+AGG | - | chr1.4:15156345-15156364 | MS.gene026637:intron | 60.0% |
| GAGGACCTAGCACTCGCGGC+CGG | - | chr1.4:15157712-15157731 | MS.gene026637:intron | 70.0% | |
| GCTTTCCGGCCGCGAGTGCT+AGG | + | chr1.4:15157720-15157739 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 15154103 | 15158107 | 15154103 | ID=MS.gene026637 |
| chr1.4 | mRNA | 15154103 | 15158107 | 15154103 | ID=MS.gene026637.t1;Parent=MS.gene026637 |
| chr1.4 | exon | 15157994 | 15158107 | 15157994 | ID=MS.gene026637.t1.exon1;Parent=MS.gene026637.t1 |
| chr1.4 | CDS | 15157994 | 15158107 | 15157994 | ID=cds.MS.gene026637.t1;Parent=MS.gene026637.t1 |
| chr1.4 | exon | 15156823 | 15157312 | 15156823 | ID=MS.gene026637.t1.exon2;Parent=MS.gene026637.t1 |
| chr1.4 | CDS | 15156823 | 15157312 | 15156823 | ID=cds.MS.gene026637.t1;Parent=MS.gene026637.t1 |
| chr1.4 | exon | 15154754 | 15156318 | 15154754 | ID=MS.gene026637.t1.exon3;Parent=MS.gene026637.t1 |
| chr1.4 | CDS | 15154754 | 15156318 | 15154754 | ID=cds.MS.gene026637.t1;Parent=MS.gene026637.t1 |
| chr1.4 | exon | 15154103 | 15154498 | 15154103 | ID=MS.gene026637.t1.exon4;Parent=MS.gene026637.t1 |
| chr1.4 | CDS | 15154103 | 15154498 | 15154103 | ID=cds.MS.gene026637.t1;Parent=MS.gene026637.t1 |
| Gene Sequence |
| Protein sequence |
