AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene031307

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031307.t1 MTR_2g081930 84.250 527 77 2 1 521 1 527 0.0 913
MS.gene031307.t1 MTR_2g081950 96.684 392 13 0 130 521 18 409 0.0 762
MS.gene031307.t1 MTR_4g081490 66.207 435 128 4 91 519 22 443 0.0 555
MS.gene031307.t1 MTR_2g081960 88.321 137 11 1 1 132 1 137 1.36e-83 256
MS.gene031307.t1 MTR_4g030040 31.311 511 324 7 10 512 5 496 7.36e-78 253
MS.gene031307.t1 MTR_4g030040 31.568 491 312 6 27 512 26 497 1.90e-76 249
MS.gene031307.t1 MTR_8g447340 33.141 519 309 9 9 512 15 510 1.20e-75 248
MS.gene031307.t1 MTR_4g030210 31.845 515 323 9 3 512 10 501 2.68e-75 247
MS.gene031307.t1 MTR_8g039190 30.040 506 330 8 13 512 13 500 8.16e-71 235
MS.gene031307.t1 MTR_5g080050 29.757 494 324 7 27 512 25 503 1.22e-63 216
MS.gene031307.t1 MTR_5g082760 29.354 511 312 9 27 512 27 513 1.23e-62 214
MS.gene031307.t1 MTR_4g081480 60.417 144 44 3 1 131 1 144 7.77e-54 179
MS.gene031307.t1 MTR_8g039070 27.075 506 309 11 13 512 13 464 4.45e-49 176
MS.gene031307.t1 MTR_4g005090 27.126 435 259 18 120 512 71 489 6.58e-23 102
MS.gene031307.t1 MTR_4g120720 27.861 201 121 6 187 383 84 264 1.72e-13 71.2
MS.gene031307.t1 MTR_6g088450 24.091 440 287 19 98 504 73 498 4.03e-12 68.9
MS.gene031307.t1 MTR_4g069500 25.653 421 262 20 128 511 80 486 5.42e-12 68.6
MS.gene031307.t1 MTR_4g069500 25.653 421 262 20 128 511 30 436 5.52e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031307.t1 AT3G20660 67.460 504 148 3 15 516 21 510 0.0 693
MS.gene031307.t1 AT1G73220 35.161 529 304 6 4 513 14 522 1.64e-100 313
MS.gene031307.t1 AT1G16390 34.132 501 293 8 26 512 25 502 1.21e-84 271
MS.gene031307.t1 AT1G79360 33.270 523 322 10 1 512 1 507 1.31e-83 269
MS.gene031307.t1 AT1G79410 31.915 517 309 12 13 514 12 500 3.46e-69 231
MS.gene031307.t1 AT1G16370 28.681 523 334 11 5 514 10 506 2.77e-65 221
MS.gene031307.t1 AT3G13050 27.366 391 245 10 119 477 64 447 1.53e-20 95.1
MS.gene031307.t1 AT3G13050 27.366 391 245 10 119 477 64 447 1.53e-20 95.1
MS.gene031307.t1 AT3G13050 27.366 391 245 10 119 477 64 447 1.53e-20 95.1
MS.gene031307.t1 AT3G13050 27.366 391 245 10 119 477 64 447 1.53e-20 95.1
MS.gene031307.t1 AT3G18830 22.864 433 290 16 113 511 71 493 1.07e-12 70.9
MS.gene031307.t1 AT1G20840 30.488 164 108 2 118 276 44 206 3.29e-12 69.7
MS.gene031307.t1 AT1G20840 30.488 164 108 2 118 276 44 206 3.29e-12 69.7
MS.gene031307.t1 AT2G16120 24.000 475 293 22 86 511 29 484 2.92e-11 66.2

Find 161 sgRNAs with CRISPR-Local

Find 470 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCTCTTTATGATACATTTA+AGG 0.087822 2.1:+18671100 MS.gene031307:CDS
AACAACCAAATATGGCATTT+AGG 0.200188 2.1:-18670041 None:intergenic
TAAAATGGTTTGTGGAGTTT+TGG 0.203637 2.1:+18670845 MS.gene031307:CDS
GAGAAGTACTGTGGAGAATT+TGG 0.220663 2.1:+18664726 MS.gene031307:CDS
CCTCTTTATGATACATTTAA+GGG 0.245863 2.1:+18671101 MS.gene031307:CDS
TGTTCCCTAAATGCCATATT+TGG 0.253255 2.1:+18670036 MS.gene031307:CDS
ACAACCAAATATGGCATTTA+GGG 0.258708 2.1:-18670040 None:intergenic
CCTGATTGGAAATGTGTTTC+GGG 0.266370 2.1:+18664840 MS.gene031307:CDS
TGCTGTTAAACAACCAAATA+TGG 0.274443 2.1:-18670049 None:intergenic
TAGGTGGTTGGTTGCCGTTC+GGG 0.275494 2.1:+18671012 MS.gene031307:CDS
CACATGTCTTGCTTGGGCTT+TGG 0.277223 2.1:+18664776 MS.gene031307:CDS
TTCTTTACCGGTTGTATGAT+TGG 0.279781 2.1:+18665005 MS.gene031307:CDS
TTTGCGGCATGCGGATTAAT+AGG 0.304800 2.1:+18671038 MS.gene031307:CDS
CAGCATTCTCCCCTAACTAT+TGG 0.305376 2.1:+18670067 MS.gene031307:CDS
GTTGCTCAGTTACACGTATT+AGG 0.319088 2.1:+18670565 MS.gene031307:CDS
AAGACATAGGTCCAATAGTT+AGG 0.324826 2.1:-18670078 None:intergenic
GCCTGATTGGAAATGTGTTT+CGG 0.329215 2.1:+18664839 MS.gene031307:CDS
TCCACTTTCTACTTCTTCTC+TGG 0.329480 2.1:+18670204 MS.gene031307:CDS
CGGTGTTGTTGGATAGGTTT+GGG 0.336960 2.1:+18670730 MS.gene031307:CDS
CATTCTCACATGTCTTGCTT+GGG 0.337860 2.1:+18664770 MS.gene031307:CDS
TCCACCATTGCTTCTTTCAA+TGG 0.351091 2.1:+18670399 MS.gene031307:CDS
GTAGAGGAGGGAGGGGATGG+AGG 0.358937 2.1:-18670292 None:intergenic
TACGATGCAGGCGGCAAGAA+TGG 0.360725 2.1:+18670959 MS.gene031307:CDS
TCATTCTCACATGTCTTGCT+TGG 0.364832 2.1:+18664769 MS.gene031307:CDS
TGATACATTTAAGGGATTGA+TGG 0.366234 2.1:+18671109 MS.gene031307:CDS
ATTTCAGGAGCTGGAGTGTT+TGG 0.368006 2.1:+18669964 MS.gene031307:intron
TATAGAGTGCACGCCATGTT+TGG 0.370167 2.1:-18670263 None:intergenic
TCTCCACTCACCGTCCAAAA+AGG 0.372668 2.1:+18664668 MS.gene031307:CDS
CGCGGTAACGGCGGTGTTGT+TGG 0.381031 2.1:+18670719 MS.gene031307:CDS
ACGATGCAGGCGGCAAGAAT+GGG 0.381748 2.1:+18670960 MS.gene031307:CDS
GCGGTGTTGTTGGATAGGTT+TGG 0.384232 2.1:+18670729 MS.gene031307:CDS
GGTGTGGAAAGTAATTAAAA+TGG 0.384412 2.1:+18670830 MS.gene031307:CDS
CTCGAACGAGGTACCATCTT+GGG 0.384476 2.1:-18670347 None:intergenic
CACATTGTTCCAATTGTCAA+TGG 0.393862 2.1:-18670759 None:intergenic
ATTGGAACAATGTGGTTTAG+TGG 0.394983 2.1:+18670768 MS.gene031307:CDS
TTAGGTGGTTGGTTGCCGTT+CGG 0.400987 2.1:+18671011 MS.gene031307:CDS
CCACCATTGCTTCTTTCAAT+GGG 0.408278 2.1:+18670400 MS.gene031307:CDS
GAGGAGGGAGGGGATGGAGG+CGG 0.408870 2.1:-18670289 None:intergenic
GACTCTTCTCTAGGAAGAAA+AGG 0.411396 2.1:+18669997 MS.gene031307:CDS
TATGTAGAGGAGGGAGGGGA+TGG 0.414413 2.1:-18670295 None:intergenic
TCATGTAGAGATTGGTTTCA+AGG 0.419072 2.1:-18670659 None:intergenic
GGGAGGAAGCCATTGACAAT+TGG 0.422014 2.1:+18670750 MS.gene031307:CDS
CCACCTAAAACGACCACAAA+AGG 0.425935 2.1:-18670996 None:intergenic
GTCTTCCTCCGCCTCCTCAC+CGG 0.426412 2.1:+18670096 MS.gene031307:CDS
AGACATAGGTCCAATAGTTA+GGG 0.434238 2.1:-18670077 None:intergenic
CATTCAAAACGTGGCATGGC+AGG 0.440572 2.1:+18670177 MS.gene031307:CDS
CGCAGAGATGCCAGCGTTCG+CGG 0.446166 2.1:+18670701 MS.gene031307:CDS
TAGGGAACAAACCACTTTGA+GGG 0.446200 2.1:-18670022 None:intergenic
TAACGGCGGTGTTGTTGGAT+AGG 0.448145 2.1:+18670724 MS.gene031307:CDS
AAGCACACTCATGTAGAGAT+TGG 0.450628 2.1:-18670667 None:intergenic
TGCTAAAACCGGTGAGGAGG+CGG 0.450942 2.1:-18670104 None:intergenic
TTGCTGATAGGCAGCCTGAT+TGG 0.452438 2.1:+18664826 MS.gene031307:CDS
AACACCACCACTGCTAAAAC+CGG 0.453779 2.1:-18670115 None:intergenic
GGAGGCATTGCAATTCTCTC+TGG 0.460841 2.1:+18670225 MS.gene031307:CDS
TTAACCTCAGTGGTGTACTT+TGG 0.468140 2.1:+18670615 MS.gene031307:CDS
GAATTATGTAGAGGAGGGAG+GGG 0.471254 2.1:-18670299 None:intergenic
CCCGAAACACATTTCCAATC+AGG 0.473229 2.1:-18664840 None:intergenic
GTCCTCGCCACCGAACCTAT+TGG 0.474581 2.1:+18670153 MS.gene031307:CDS
GCGGCATGGCACCGGAGTCG+TGG 0.478124 2.1:+18664892 MS.gene031307:CDS
GTTGCCGTTCGGGGTATTTG+CGG 0.480175 2.1:+18671022 MS.gene031307:CDS
CCTCGAACGAGGTACCATCT+TGG 0.480908 2.1:-18670348 None:intergenic
GGGAGTTTGATGAGTAATGT+AGG 0.481130 2.1:+18670807 MS.gene031307:CDS
GATGCCAGCGTTCGCGGTAA+CGG 0.485542 2.1:+18670707 MS.gene031307:CDS
TTGGAAATGTGTTTCGGGTA+CGG 0.486633 2.1:+18664845 MS.gene031307:CDS
GGCGCTAGGGAGTACGATGC+AGG 0.487074 2.1:+18670947 MS.gene031307:CDS
TGGCACCGGAGTCGTGGGAG+TGG 0.488838 2.1:+18664898 MS.gene031307:CDS
TGTGGTGACAAGTTTAAAGT+TGG 0.493130 2.1:+18664966 MS.gene031307:CDS
GAGAATTATGTAGAGGAGGG+AGG 0.497759 2.1:-18670301 None:intergenic
CCCTTAAATGTATCATAAAG+AGG 0.500701 2.1:-18671101 None:intergenic
AGAATTATGTAGAGGAGGGA+GGG 0.500725 2.1:-18670300 None:intergenic
GAACGAACCAATCATACAAC+CGG 0.503359 2.1:-18665012 None:intergenic
GAAAATAAGAATGCACAAGT+TGG 0.503754 2.1:+18670522 MS.gene031307:CDS
ACATTTAAGGGATTGATGGC+TGG 0.504423 2.1:+18671113 MS.gene031307:CDS
TTGGGGATATTTGGAATGGC+CGG 0.504813 2.1:+18670864 MS.gene031307:CDS
AAAGTAATTAAAATGGTTTG+TGG 0.506768 2.1:+18670837 MS.gene031307:CDS
GACGAGAATTATGTAGAGGA+GGG 0.509425 2.1:-18670304 None:intergenic
GGACGAGAATTATGTAGAGG+AGG 0.510362 2.1:-18670305 None:intergenic
AAGTGTCTGCGGCATGGCAC+CGG 0.510601 2.1:+18664884 MS.gene031307:CDS
AGTGTGAGGACAACTCCGTC+TGG 0.510916 2.1:-18670432 None:intergenic
TCGGGTACGGAGTGTGCCGC+CGG 0.511599 2.1:+18664858 MS.gene031307:CDS
AGAGGCATATTTAGTGTCTC+CGG 0.514390 2.1:-18671083 None:intergenic
TTAGGGAACAAACCACTTTG+AGG 0.514599 2.1:-18670023 None:intergenic
CGTTTATTCTTCCTCGAACG+AGG 0.522533 2.1:-18670359 None:intergenic
GGCCAATAGGTTCGGTGGCG+AGG 0.525689 2.1:-18670155 None:intergenic
CCGGAGTCGTGGGAGTGGAT+CGG 0.527935 2.1:+18664903 MS.gene031307:CDS
CGGCATGGCACCGGAGTCGT+GGG 0.528963 2.1:+18664893 MS.gene031307:CDS
TCCAGAGAAGAAGTAGAAAG+TGG 0.529122 2.1:-18670205 None:intergenic
TGGGGATATTTGGAATGGCC+GGG 0.531016 2.1:+18670865 MS.gene031307:CDS
ACTTTCTACTTCTTCTCTGG+AGG 0.531278 2.1:+18670207 MS.gene031307:CDS
GTTGTGAGGAATGCGGCGCT+AGG 0.535286 2.1:+18670933 MS.gene031307:CDS
CGGAGGGAAAGATGCTTCTA+CGG 0.537691 2.1:+18664923 MS.gene031307:CDS
CACCTTTCAGACTCTTCTCT+AGG 0.540258 2.1:+18669988 MS.gene031307:CDS
GAGTCGTGGGAGTGGATCGG+AGG 0.542740 2.1:+18664906 MS.gene031307:CDS
TTGTGAGGAATGCGGCGCTA+GGG 0.548709 2.1:+18670934 MS.gene031307:CDS
ATACAACAAATTATAAGTCC+CGG 0.551298 2.1:-18670883 None:intergenic
GGTACGGAGTGTGCCGCCGG+TGG 0.553848 2.1:+18664861 MS.gene031307:CDS
CCAAGATGGTACCTCGTTCG+AGG 0.556778 2.1:+18670348 MS.gene031307:CDS
ACCGCCGTTACCGCGAACGC+TGG 0.557097 2.1:-18670711 None:intergenic
CGGTGGAAGTGTCTGCGGCA+TGG 0.559552 2.1:+18664878 MS.gene031307:CDS
CGATGCAGGCGGCAAGAATG+GGG 0.564733 2.1:+18670961 MS.gene031307:CDS
CCGATCCACTCCCACGACTC+CGG 0.566164 2.1:-18664903 None:intergenic
CACGACGGAGTTATTTCCTA+CGG 0.566285 2.1:+18670911 MS.gene031307:CDS
AGGTGGTTGGTTGCCGTTCG+GGG 0.566784 2.1:+18671013 MS.gene031307:CDS
GTGGAGATCATCGGAAAATG+AGG 0.567667 2.1:-18664652 None:intergenic
TGATGAGTAATGTAGGGGTG+TGG 0.568043 2.1:+18670814 MS.gene031307:CDS
TAAAACCGGTGAGGAGGCGG+AGG 0.570295 2.1:-18670101 None:intergenic
TTCGGGGTATTTGCGGCATG+CGG 0.572454 2.1:+18671029 MS.gene031307:CDS
GAGGACAATGTGGCCGCCAT+CGG 0.573320 2.1:-18664633 None:intergenic
GGACGGTGAGTGGAGATCAT+CGG 0.574222 2.1:-18664661 None:intergenic
TGGCCATTCAAAACGTGGCA+TGG 0.574770 2.1:+18670173 MS.gene031307:CDS
CACTGCTAAAACCGGTGAGG+AGG 0.577583 2.1:-18670107 None:intergenic
AGTCGTGGGAGTGGATCGGA+GGG 0.580681 2.1:+18664907 MS.gene031307:CDS
GCCAGCGTTCGCGGTAACGG+CGG 0.581594 2.1:+18670710 MS.gene031307:CDS
CCCATTGAAAGAAGCAATGG+TGG 0.582568 2.1:-18670400 None:intergenic
GGAGTTTGATGAGTAATGTA+GGG 0.583451 2.1:+18670808 MS.gene031307:CDS
TCTTGGGGACTCAGAGACAA+AGG 0.586540 2.1:-18670331 None:intergenic
AGTTATTTCCTACGGTTGTG+AGG 0.593984 2.1:+18670919 MS.gene031307:CDS
TTTCCCATTGAAAGAAGCAA+TGG 0.594481 2.1:-18670403 None:intergenic
ATACTTCTTCATCGAGTGTG+AGG 0.594523 2.1:-18670446 None:intergenic
TTCCTAGAGAAGAGTCTGAA+AGG 0.594534 2.1:-18669990 None:intergenic
GAAGGACGAGAATTATGTAG+AGG 0.599141 2.1:-18670308 None:intergenic
TTGTCTCTGAGTCCCCAAGA+TGG 0.599905 2.1:+18670334 MS.gene031307:CDS
TGAATGGCCAATAGGTTCGG+TGG 0.601475 2.1:-18670160 None:intergenic
CTTGGGGACTCAGAGACAAA+GGG 0.603867 2.1:-18670330 None:intergenic
TGAGGACAACTCCGTCTGGA+AGG 0.606941 2.1:-18670428 None:intergenic
AAGAAAAGGTTCCCTCAAAG+TGG 0.608734 2.1:+18670011 MS.gene031307:CDS
GCAACAAATCACATCTACAA+TGG 0.608785 2.1:-18670547 None:intergenic
TGGCGAGGACGAAGGCGCAA+AGG 0.611595 2.1:-18670140 None:intergenic
CATTGACAATTGGAACAATG+TGG 0.612944 2.1:+18670760 MS.gene031307:CDS
GCCGCAGACACTTCCACCGG+CGG 0.613278 2.1:-18664874 None:intergenic
GAGGAGGCGGAGGAAGACAT+AGG 0.614881 2.1:-18670091 None:intergenic
AGGTTCGGTGGCGAGGACGA+AGG 0.620908 2.1:-18670148 None:intergenic
GATGCAGGCGGCAAGAATGG+GGG 0.628437 2.1:+18670962 MS.gene031307:CDS
TGTTGTTGGATAGGTTTGGG+AGG 0.631287 2.1:+18670733 MS.gene031307:CDS
TCGAACGAGGTACCATCTTG+GGG 0.633363 2.1:-18670346 None:intergenic
CATGCCGCAAATACCCCGAA+CGG 0.633636 2.1:-18671026 None:intergenic
GCCGCCGGTGGAAGTGTCTG+CGG 0.635111 2.1:+18664873 MS.gene031307:CDS
AATGGGAAACACCTTCCAGA+CGG 0.635296 2.1:+18670417 MS.gene031307:CDS
AGTACTGTGGAGAATTTGGA+AGG 0.636956 2.1:+18664730 MS.gene031307:CDS
CCTATTGGCCATTCAAAACG+TGG 0.640949 2.1:+18670168 MS.gene031307:CDS
ATGCTTCTACGGTGACTGAG+TGG 0.641028 2.1:+18664934 MS.gene031307:CDS
TCGCCTACATCTTCCAAACA+TGG 0.641543 2.1:+18670250 MS.gene031307:CDS
ACGCCATGTTTGGAAGATGT+AGG 0.645747 2.1:-18670253 None:intergenic
CATGAGTGTGCTTCTCAATG+CGG 0.649215 2.1:+18670677 MS.gene031307:CDS
CATGCCGCAGACACTTCCAC+CGG 0.655521 2.1:-18664877 None:intergenic
TATTAACTTCTTAACCTCAG+TGG 0.656751 2.1:+18670605 MS.gene031307:CDS
GCGGCATGCGGATTAATAGG+TGG 0.659566 2.1:+18671041 MS.gene031307:CDS
ACTGAGTGGAGTTTGATATG+TGG 0.661591 2.1:+18664948 MS.gene031307:CDS
GCTAGGGAGTACGATGCAGG+CGG 0.665950 2.1:+18670950 MS.gene031307:CDS
TTTGTTGTATATTTACACGA+CGG 0.667839 2.1:+18670896 MS.gene031307:CDS
TCCTACGGTTGTGAGGAATG+CGG 0.669512 2.1:+18670926 MS.gene031307:CDS
GAGTTTGATGAGTAATGTAG+GGG 0.679229 2.1:+18670809 MS.gene031307:CDS
GCCGCATTCCTCACAACCGT+AGG 0.684939 2.1:-18670927 None:intergenic
ATCGGAAAATGAGGACAATG+TGG 0.689494 2.1:-18664643 None:intergenic
GACATAGGTCCAATAGTTAG+GGG 0.693172 2.1:-18670076 None:intergenic
ACTGTGGAGAATTTGGAAGG+TGG 0.701208 2.1:+18664733 MS.gene031307:CDS
GGGACTCAGAGACAAAGGGA+AGG 0.701764 2.1:-18670326 None:intergenic
CACCACTGCTAAAACCGGTG+AGG 0.715272 2.1:-18670110 None:intergenic
ATACAACCTAATTAGCTACG+TGG 0.724539 2.1:+18670500 MS.gene031307:CDS
GAGATGCTTGAGAAGTACTG+TGG 0.729992 2.1:+18664717 MS.gene031307:CDS
AATACCAAAGTACACCACTG+AGG 0.793817 2.1:-18670619 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr2.1:18669513-18669532 MS.gene031307:intron 0.0%
!!! TAATATTTTTTTTAATATAA+AGG - chr2.1:18668757-18668776 None:intergenic 0.0%
!! AATGAGATTTATATTAAAAA+AGG + chr2.1:18668651-18668670 MS.gene031307:intron 10.0%
!! ATGAGATTTATATTAAAAAA+GGG + chr2.1:18668652-18668671 MS.gene031307:intron 10.0%
!! TGAAAGAAAAAAATTATATA+AGG + chr2.1:18666820-18666839 MS.gene031307:intron 10.0%
!! TGATTGAAATATAATAAATA+AGG - chr2.1:18665326-18665345 None:intergenic 10.0%
!! TTAATTCATAATAATTGTTA+AGG + chr2.1:18667393-18667412 MS.gene031307:intron 10.0%
!! TTAATTCATAATAATTGTTA+AGG - chr2.1:18667412-18667393 None:intergenic 10.0%
!! TTATAAAAGTTGTTAAAAAA+TGG + chr2.1:18669297-18669316 MS.gene031307:intron 10.0%
!!! ATTAATAATGTTGATTTTAA+TGG - chr2.1:18666088-18666107 None:intergenic 10.0%
!!! TAAATTAAATTTTTACATTC+GGG - chr2.1:18665595-18665614 None:intergenic 10.0%
!!! TAATTTTCTTTGTAAAAATA+TGG - chr2.1:18669205-18669224 None:intergenic 10.0%
!!! TATTTTTTTTAATATAAAGG+AGG - chr2.1:18668754-18668773 None:intergenic 10.0%
!!! TTGTTATTTTATAAGAAATT+AGG + chr2.1:18667786-18667805 MS.gene031307:intron 10.0%
!! AAAAAAATGTCAAAATTGTT+AGG - chr2.1:18666474-18666493 None:intergenic 15.0%
!! AAAAACAAGTTTAAAAAAAG+AGG - chr2.1:18668229-18668248 None:intergenic 15.0%
!! AAAAATATGAGATAAAACAA+AGG + chr2.1:18667961-18667980 MS.gene031307:intron 15.0%
!! AAAATTGAAAGAAATCAAAA+GGG - chr2.1:18667546-18667565 None:intergenic 15.0%
!! ACATTGTTAATAAATATGTT+TGG + chr2.1:18666783-18666802 MS.gene031307:intron 15.0%
!! ATAGATTTATATAAACAAAG+TGG + chr2.1:18668484-18668503 MS.gene031307:intron 15.0%
!! ATGGAAAAAAAATTATAACA+AGG + chr2.1:18667125-18667144 MS.gene031307:intron 15.0%
!! ATTTATACAAATAACTTAGT+TGG + chr2.1:18666209-18666228 MS.gene031307:intron 15.0%
!! GAGATTTATCTTAAAAAAAA+AGG - chr2.1:18668341-18668360 None:intergenic 15.0%
!! GATAAATAACTTAGTAAAAT+CGG - chr2.1:18668299-18668318 None:intergenic 15.0%
!! TATTTCAATCATCTATAATT+AGG + chr2.1:18665335-18665354 MS.gene031307:intron 15.0%
!! TGAAAATTGAAAGAAAAAAA+GGG - chr2.1:18667495-18667514 None:intergenic 15.0%
!! TGAGATTTATATTAAAAAAG+GGG + chr2.1:18668653-18668672 MS.gene031307:intron 15.0%
!! TTGAAAATTGAAAGAAAAAA+AGG - chr2.1:18667496-18667515 None:intergenic 15.0%
!!! AAACTTGTTTTTTATTATAG+AGG + chr2.1:18668237-18668256 MS.gene031307:intron 15.0%
!!! AACTTCATTTAATTTGTATA+AGG - chr2.1:18666448-18666467 None:intergenic 15.0%
!!! AAGGTATTAATTATAGTTAT+TGG - chr2.1:18665141-18665160 None:intergenic 15.0%
!!! AGTGTATTTCTATTATAAAA+AGG - chr2.1:18665296-18665315 None:intergenic 15.0%
!!! CTATAATTAATACCTTTTAA+AGG + chr2.1:18665145-18665164 MS.gene031307:intron 15.0%
!!! GGTATGATTTTTTTTTTTTA+GGG - chr2.1:18665388-18665407 None:intergenic 15.0%
!!! GTATGATTTTTTTTTTTTGA+GGG - chr2.1:18665416-18665435 None:intergenic 15.0%
!!! TGAAAAAAAAATTTGAGTTT+TGG - chr2.1:18667190-18667209 None:intergenic 15.0%
!!! TGGTATGATTTTTTTTTTTT+AGG - chr2.1:18665389-18665408 None:intergenic 15.0%
!!! TTAATTTGTATAAGGTTTAA+TGG - chr2.1:18666440-18666459 None:intergenic 15.0%
!!! TTTTTCTTTTTTTGGTAAAA+TGG + chr2.1:18666367-18666386 MS.gene031307:intron 15.0%
!! AAAGTAATTAAAATGGTTTG+TGG + chr2.1:18670837-18670856 MS.gene031307:CDS 20.0%
!! AAATTTAACCTTATCCTTAT+TGG + chr2.1:18666331-18666350 MS.gene031307:intron 20.0%
!! AAGTTGTTAAATACATCTTA+AGG - chr2.1:18669771-18669790 None:intergenic 20.0%
!! AATTATATAAGGAAAGAAAG+TGG + chr2.1:18666831-18666850 MS.gene031307:intron 20.0%
!! AGTCAATTATCAATTAATAG+AGG + chr2.1:18666735-18666754 MS.gene031307:intron 20.0%
!! ATCAAAAAATGTCTAATAAG+CGG - chr2.1:18667019-18667038 None:intergenic 20.0%
!! ATGAAAATTCTTCTCTTTAT+TGG + chr2.1:18666941-18666960 MS.gene031307:intron 20.0%
!! ATTAAAAAAATTATCCGTTG+CGG + chr2.1:18665837-18665856 MS.gene031307:intron 20.0%
!! ATTCATAATAATTGTTAAGG+TGG + chr2.1:18667396-18667415 MS.gene031307:intron 20.0%
!! ATTCATAATAATTGTTAAGG+TGG - chr2.1:18667415-18667396 None:intergenic 20.0%
!! ATTTATATAAACAAAGTGGT+GGG + chr2.1:18668488-18668507 MS.gene031307:intron 20.0%
!! CATACATAATTAAAATAGAG+TGG - chr2.1:18669106-18669125 None:intergenic 20.0%
!! GAAAATTGAAAGAAATCAAA+AGG - chr2.1:18667547-18667566 None:intergenic 20.0%
!! TAAAAATATGGTTGTTAATG+TGG - chr2.1:18669193-18669212 None:intergenic 20.0%
!! TAAAACAAAGGAAAGTTTAA+TGG + chr2.1:18667973-18667992 MS.gene031307:intron 20.0%
!! TAAATACGATGAACAATATT+CGG + chr2.1:18668825-18668844 MS.gene031307:intron 20.0%
!! TATGAATATTATTCAGCAAA+TGG - chr2.1:18669919-18669938 None:intergenic 20.0%
!! TATGATTCGATTCTTTATTA+GGG + chr2.1:18667607-18667626 MS.gene031307:intron 20.0%
!! TCAAAATACATACCTTTAAA+AGG - chr2.1:18665160-18665179 None:intergenic 20.0%
!! TTCATAATAATTGTTAAGGT+GGG + chr2.1:18667397-18667416 MS.gene031307:intron 20.0%
!! TTCATAATAATTGTTAAGGT+GGG - chr2.1:18667416-18667397 None:intergenic 20.0%
!! TTCTTCATAGTGAAAATTAT+GGG + chr2.1:18667707-18667726 MS.gene031307:intron 20.0%
!! TTTGAATAAGTGAAAAAGAA+TGG + chr2.1:18666879-18666898 MS.gene031307:intron 20.0%
!! TTTGAGGAACTTAAATTAAT+TGG + chr2.1:18667842-18667861 MS.gene031307:intron 20.0%
!! TTTGCTGAATAATATTCATA+TGG + chr2.1:18669919-18669938 MS.gene031307:intron 20.0%
!!! ACCTTTTACTTTAAATAAAG+AGG - chr2.1:18668586-18668605 None:intergenic 20.0%
!!! ATTAACCCTAATGATATTTT+TGG - chr2.1:18667747-18667766 None:intergenic 20.0%
!!! ATTTTCTTTCTCTATTGTTT+TGG - chr2.1:18669244-18669263 None:intergenic 20.0%
!!! GAACGATATATTTTTTTAAG+AGG + chr2.1:18667287-18667306 MS.gene031307:intron 20.0%
!!! GATATATTTTTTTAAGAGGA+GGG + chr2.1:18667291-18667310 MS.gene031307:intron 20.0%
!!! GATCTCTTTTTTTCTTTTTT+TGG + chr2.1:18666359-18666378 MS.gene031307:intron 20.0%
!!! GGTATGATTTTTTTTTTTTG+AGG - chr2.1:18665417-18665436 None:intergenic 20.0%
!!! TCCTCTTTATTTAAAGTAAA+AGG + chr2.1:18668582-18668601 MS.gene031307:intron 20.0%
!!! TTCATATATGTTTTTTTGCT+AGG - chr2.1:18669845-18669864 None:intergenic 20.0%
!!! TTTTTTCTGATCTTAAAACA+CGG + chr2.1:18665512-18665531 MS.gene031307:intron 20.0%
! AAAAAAAAAAATCATACCCG+TGG + chr2.1:18665419-18665438 MS.gene031307:intron 25.0%
! AAAAAAAAAATCATACCCGT+GGG + chr2.1:18665420-18665439 MS.gene031307:intron 25.0%
! AAATACGATGAACAATATTC+GGG + chr2.1:18668826-18668845 MS.gene031307:intron 25.0%
! AAATATTTGGAAGTAGGATA+TGG + chr2.1:18665952-18665971 MS.gene031307:intron 25.0%
! AACAAGTTTAAAAAAAGAGG+AGG - chr2.1:18668226-18668245 None:intergenic 25.0%
! AAGTAGTTAAATACACCTTA+AGG - chr2.1:18669625-18669644 None:intergenic 25.0%
! AATATTTGGAAGTAGGATAT+GGG + chr2.1:18665953-18665972 MS.gene031307:intron 25.0%
! ACAAGTAAATATTTGGAAGT+AGG + chr2.1:18665946-18665965 MS.gene031307:intron 25.0%
! ACAAGTTTAAAAAAAGAGGA+GGG - chr2.1:18668225-18668244 None:intergenic 25.0%
! ACACCTTAATAAAAAGAAGT+GGG + chr2.1:18669814-18669833 MS.gene031307:intron 25.0%
! ACATCTATCTTACTGTATAT+TGG - chr2.1:18668078-18668097 None:intergenic 25.0%
! AGGAAAGTGATGATATATTA+CGG + chr2.1:18669013-18669032 MS.gene031307:intron 25.0%
! ATACAACAAATTATAAGTCC+CGG - chr2.1:18670886-18670905 None:intergenic 25.0%
! ATTGTATGAGTGAAATGATT+TGG - chr2.1:18665649-18665668 None:intergenic 25.0%
! CCTCTTTATGATACATTTAA+GGG + chr2.1:18671101-18671120 MS.gene031307:CDS 25.0%
! CTATGATTCGATTCTTTATT+AGG + chr2.1:18667606-18667625 MS.gene031307:intron 25.0%
! GAGACATTTGTTTAAAAAAG+AGG + chr2.1:18669349-18669368 MS.gene031307:intron 25.0%
! GATTAATTCACATTGACATA+TGG - chr2.1:18665106-18665125 None:intergenic 25.0%
! GATTTATATAAACAAAGTGG+TGG + chr2.1:18668487-18668506 MS.gene031307:intron 25.0%
! GGAATATTTGTAATGTTTGT+CGG - chr2.1:18669463-18669482 None:intergenic 25.0%
! GTTCTTCATAGTGAAAATTA+TGG + chr2.1:18667706-18667725 MS.gene031307:intron 25.0%
! TAGGGTAACAAGTAAATATT+TGG + chr2.1:18665939-18665958 MS.gene031307:intron 25.0%
! TCATAATAATTGTTAAGGTG+GGG + chr2.1:18667398-18667417 MS.gene031307:intron 25.0%
! TCATAATAATTGTTAAGGTG+GGG - chr2.1:18667417-18667398 None:intergenic 25.0%
! TTAAAAAAATTATCCGTTGC+GGG + chr2.1:18665838-18665857 MS.gene031307:intron 25.0%
! TTCCTCCAAAAATATCATTA+GGG + chr2.1:18667739-18667758 MS.gene031307:intron 25.0%
! TTGCTCAATTAGATTGATAT+TGG - chr2.1:18669141-18669160 None:intergenic 25.0%
!! ACACCTTCTAAAAAATAAGT+GGG + chr2.1:18669667-18669686 MS.gene031307:intron 25.0%
!! ACACCTTCTAAAAAATAAGT+GGG - chr2.1:18669686-18669667 None:intergenic 25.0%
!! GATCGAAATTTTGTGATATA+TGG - chr2.1:18665723-18665742 None:intergenic 25.0%
!! TTAAATTTTTACATTCGGGA+CGG - chr2.1:18665591-18665610 None:intergenic 25.0%
!! TTCATTTTCTCATAGCTAAA+CGG + chr2.1:18666683-18666702 MS.gene031307:intron 25.0%
!! TTTGTTGTATATTTACACGA+CGG + chr2.1:18670896-18670915 MS.gene031307:CDS 25.0%
!! TTTTTCTGATCTTAAAACAC+GGG + chr2.1:18665513-18665532 MS.gene031307:intron 25.0%
!!! AATGAGTGTTGATTTTTGTA+AGG + chr2.1:18669064-18669083 MS.gene031307:intron 25.0%
!!! AATTGGTTATTGCTATTTTG+TGG + chr2.1:18667859-18667878 MS.gene031307:intron 25.0%
!!! ATGAGTGTTGATTTTTGTAA+GGG + chr2.1:18669065-18669084 MS.gene031307:intron 25.0%
!!! ATGTAGTGTTTTGCTTTTTA+CGG - chr2.1:18669484-18669503 None:intergenic 25.0%
!!! CGATATATTTTTTTAAGAGG+AGG + chr2.1:18667290-18667309 MS.gene031307:intron 25.0%
!!! TCTCATATTTTTTGTCAACA+AGG - chr2.1:18667953-18667972 None:intergenic 25.0%
!!! TCTTTTTCTTTTGGTTATCA+AGG + chr2.1:18669384-18669403 MS.gene031307:intron 25.0%
!!! TGAAAAAGAATGGATTGAAT+TGG + chr2.1:18666889-18666908 MS.gene031307:intron 25.0%
!!! TTAATGCATTGCATTTTTTG+TGG + chr2.1:18668605-18668624 MS.gene031307:intron 25.0%
!!! TTTTTCAAGAGTAATGCTAT+TGG + chr2.1:18667203-18667222 MS.gene031307:intron 25.0%
!!! TTTTTTAGGGAAGATATGTA+TGG - chr2.1:18665375-18665394 None:intergenic 25.0%
!!! TTTTTTTTTTTGAGGGAAAC+TGG - chr2.1:18665409-18665428 None:intergenic 25.0%
AAACATAAATGAGGCTTTCA+TGG - chr2.1:18669425-18669444 None:intergenic 30.0%
AAAGAGATCACAAACCAATA+AGG - chr2.1:18666348-18666367 None:intergenic 30.0%
AACAACCAAATATGGCATTT+AGG - chr2.1:18670044-18670063 None:intergenic 30.0%
AATACGATGAACAATATTCG+GGG + chr2.1:18668827-18668846 MS.gene031307:intron 30.0%
ACAACCAAATATGGCATTTA+GGG - chr2.1:18670043-18670062 None:intergenic 30.0%
ATAAGTCCAGTATAACAGAA+CGG + chr2.1:18668036-18668055 MS.gene031307:intron 30.0%
ATAGAAGAAAAAGAAGAGAG+AGG + chr2.1:18668993-18669012 MS.gene031307:intron 30.0%
ATATATTACGGAGAGAGTTA+GGG + chr2.1:18669025-18669044 MS.gene031307:intron 30.0%
ATATTTGGAAGTAGGATATG+GGG + chr2.1:18665954-18665973 MS.gene031307:intron 30.0%
ATCACAAACCAATAAGGATA+AGG - chr2.1:18666342-18666361 None:intergenic 30.0%
CACACCTTAATAAAAAGAAG+TGG + chr2.1:18669813-18669832 MS.gene031307:intron 30.0%
CCCTTAAATGTATCATAAAG+AGG - chr2.1:18671104-18671123 None:intergenic 30.0%
CTTCCTCCAAAAATATCATT+AGG + chr2.1:18667738-18667757 MS.gene031307:intron 30.0%
GAAAATAAGAATGCACAAGT+TGG + chr2.1:18670522-18670541 MS.gene031307:CDS 30.0%
GCCTCTTTATGATACATTTA+AGG + chr2.1:18671100-18671119 MS.gene031307:CDS 30.0%
GGTGTGGAAAGTAATTAAAA+TGG + chr2.1:18670830-18670849 MS.gene031307:CDS 30.0%
TAAAATGAAGGGTCAAGATT+TGG + chr2.1:18668163-18668182 MS.gene031307:intron 30.0%
TAAAATGAAGGGTCAAGATT+TGG - chr2.1:18668182-18668163 None:intergenic 30.0%
TAAGTCTTTAGACTTACTCT+TGG + chr2.1:18668188-18668207 MS.gene031307:intron 30.0%
TAAGTCTTTAGACTTACTCT+TGG - chr2.1:18668207-18668188 None:intergenic 30.0%
TAGTGCAGTAATCATAGATA+GGG - chr2.1:18666022-18666041 None:intergenic 30.0%
TATACAGTAAGATAGATGTG+TGG + chr2.1:18668079-18668098 MS.gene031307:intron 30.0%
TATTAACTTCTTAACCTCAG+TGG + chr2.1:18670605-18670624 MS.gene031307:CDS 30.0%
TCATGAGAGAAACATAAATG+AGG - chr2.1:18669434-18669453 None:intergenic 30.0%
TCTAACACTCACTCATTTAT+TGG - chr2.1:18668531-18668550 None:intergenic 30.0%
TGACATATTCATTAATGACG+TGG - chr2.1:18667074-18667093 None:intergenic 30.0%
TGATACATTTAAGGGATTGA+TGG + chr2.1:18671109-18671128 MS.gene031307:CDS 30.0%
TGCTGTTAAACAACCAAATA+TGG - chr2.1:18670052-18670071 None:intergenic 30.0%
TTAGTGCAGTAATCATAGAT+AGG - chr2.1:18666023-18666042 None:intergenic 30.0%
TTCTTCATATAGCCATCAAT+CGG + chr2.1:18665749-18665768 MS.gene031307:intron 30.0%
! ACACCCACTTCTTTTTATTA+AGG - chr2.1:18669820-18669839 None:intergenic 30.0%
! AGATGGAAGAAGTAGTTTTT+AGG - chr2.1:18665220-18665239 None:intergenic 30.0%
! ATTCAATTTTTCATCCCTGT+TGG + chr2.1:18665909-18665928 MS.gene031307:intron 30.0%
! CACACCTTCTAAAAAATAAG+TGG + chr2.1:18669666-18669685 MS.gene031307:intron 30.0%
! CACACCTTCTAAAAAATAAG+TGG - chr2.1:18669685-18669666 None:intergenic 30.0%
! GTTAATGTCTTGCATTTTTG+TGG - chr2.1:18668389-18668408 None:intergenic 30.0%
! TAAATTTTTACATTCGGGAC+GGG - chr2.1:18665590-18665609 None:intergenic 30.0%
! TATTTTCCACGTAGCTAATT+AGG - chr2.1:18670509-18670528 None:intergenic 30.0%
! TGGTTATGATTTTTGCTGAT+AGG + chr2.1:18664814-18664833 MS.gene031307:CDS 30.0%
! TTCCATTGCATCTCATTTTA+GGG - chr2.1:18667111-18667130 None:intergenic 30.0%
! TTTCCATTGCATCTCATTTT+AGG - chr2.1:18667112-18667131 None:intergenic 30.0%
!! AAAATGGTTTGTGGAGTTTT+GGG + chr2.1:18670846-18670865 MS.gene031307:CDS 30.0%
!! GATTTTGATGTTGCAATTTC+AGG + chr2.1:18669949-18669968 MS.gene031307:intron 30.0%
!! TAAAATGGTTTGTGGAGTTT+TGG + chr2.1:18670845-18670864 MS.gene031307:CDS 30.0%
!!! AAAACCCGTCAATTTTGATT+TGG - chr2.1:18665458-18665477 None:intergenic 30.0%
!!! AACCCTAATGATATTTTTGG+AGG - chr2.1:18667744-18667763 None:intergenic 30.0%
!!! ACACCCACTTATTTTTTAGA+AGG + chr2.1:18669726-18669745 MS.gene031307:intron 30.0%
!!! ACACCCACTTATTTTTTAGA+AGG - chr2.1:18669745-18669726 None:intergenic 30.0%
AAAAAAAGGGTTGAGAGAGA+TGG - chr2.1:18667482-18667501 None:intergenic 35.0%
AAGACATAGGTCCAATAGTT+AGG - chr2.1:18670081-18670100 None:intergenic 35.0%
AATGCATTACAACATTGCAC+CGG + chr2.1:18665791-18665810 MS.gene031307:intron 35.0%
ACAAGGTTTGAGTATGTGTT+TGG + chr2.1:18665488-18665507 MS.gene031307:intron 35.0%
ACTCCCACATAAAAACTAGT+GGG - chr2.1:18669586-18669605 None:intergenic 35.0%
AGAAATTAGGTCTATGTGCA+CGG + chr2.1:18667799-18667818 MS.gene031307:intron 35.0%
AGACATAGGTCCAATAGTTA+GGG - chr2.1:18670080-18670099 None:intergenic 35.0%
ATACAACCTAATTAGCTACG+TGG + chr2.1:18670500-18670519 MS.gene031307:CDS 35.0%
ATACGATGAACAATATTCGG+GGG + chr2.1:18668828-18668847 MS.gene031307:intron 35.0%
ATCACATAAACCACTTGAGT+TGG - chr2.1:18666975-18666994 None:intergenic 35.0%
ATTGGAACAATGTGGTTTAG+TGG + chr2.1:18670768-18670787 MS.gene031307:CDS 35.0%
CAAGGTTTGAGTATGTGTTT+GGG + chr2.1:18665489-18665508 MS.gene031307:intron 35.0%
CACATTGTTCCAATTGTCAA+TGG - chr2.1:18670762-18670781 None:intergenic 35.0%
CATTGACAATTGGAACAATG+TGG + chr2.1:18670760-18670779 MS.gene031307:CDS 35.0%
CCGAACCAAATCAAAATTGA+CGG + chr2.1:18665450-18665469 MS.gene031307:intron 35.0%
CGAACCAAATCAAAATTGAC+GGG + chr2.1:18665451-18665470 MS.gene031307:intron 35.0%
GAAAGAAAGTGGAAAGTGAA+AGG + chr2.1:18666842-18666861 MS.gene031307:intron 35.0%
GAATTGGAGAAAATCTTGAC+TGG + chr2.1:18666905-18666924 MS.gene031307:intron 35.0%
GAGTTTGATGAGTAATGTAG+GGG + chr2.1:18670809-18670828 MS.gene031307:CDS 35.0%
GATATATTACGGAGAGAGTT+AGG + chr2.1:18669024-18669043 MS.gene031307:intron 35.0%
GCAACAAATCACATCTACAA+TGG - chr2.1:18670550-18670569 None:intergenic 35.0%
GGAGTTTGATGAGTAATGTA+GGG + chr2.1:18670808-18670827 MS.gene031307:CDS 35.0%
GTAGAACACATAAAGTGAGA+TGG - chr2.1:18665237-18665256 None:intergenic 35.0%
GTTGAGAGAGATAGAAGAAT+AGG - chr2.1:18667524-18667543 None:intergenic 35.0%
TCAAGGTGTACAATAGCATT+CGG - chr2.1:18668961-18668980 None:intergenic 35.0%
TCTATCTCTAATCCATCTCA+AGG - chr2.1:18668978-18668997 None:intergenic 35.0%
TGTTCCCTAAATGCCATATT+TGG + chr2.1:18670036-18670055 MS.gene031307:CDS 35.0%
TTTCATGGAACAATAGCACA+TGG - chr2.1:18669410-18669429 None:intergenic 35.0%
TTTCCCATTGAAAGAAGCAA+TGG - chr2.1:18670406-18670425 None:intergenic 35.0%
TTTGTTGAAATGCTTGTCGT+GGG - chr2.1:18668015-18668034 None:intergenic 35.0%
! ACTTTTGGATCATTGGATGA+TGG + chr2.1:18667891-18667910 MS.gene031307:intron 35.0%
! ATAGCTAAACGGTGGATTTA+TGG + chr2.1:18666694-18666713 MS.gene031307:intron 35.0%
! ATTTTCTCATAGCTAAACGG+TGG + chr2.1:18666686-18666705 MS.gene031307:intron 35.0%
! CGCACATTGTCTTTTTCTTT+TGG + chr2.1:18669375-18669394 MS.gene031307:intron 35.0%
! GGTTAACATCGTACATTTTG+TGG + chr2.1:18668674-18668693 MS.gene031307:intron 35.0%
! TCTTACGACTTTTGGATCAT+TGG + chr2.1:18667884-18667903 MS.gene031307:intron 35.0%
! TGTGGTGACAAGTTTAAAGT+TGG + chr2.1:18664966-18664985 MS.gene031307:CDS 35.0%
! TTCTTTACCGGTTGTATGAT+TGG + chr2.1:18665005-18665024 MS.gene031307:CDS 35.0%
! TTTGGAAGCTTTTCACACTA+TGG + chr2.1:18664794-18664813 MS.gene031307:CDS 35.0%
! TTTTAGCAAGCTACACCTTA+AGG + chr2.1:18669607-18669626 MS.gene031307:intron 35.0%
! TTTTGAATGGCCAATAGGTT+CGG - chr2.1:18670166-18670185 None:intergenic 35.0%
! TTTTGATAAGTCGACATTGC+TGG + chr2.1:18665174-18665193 MS.gene031307:intron 35.0%
! TTTTGTTGAAATGCTTGTCG+TGG - chr2.1:18668016-18668035 None:intergenic 35.0%
!! AAAATCTTGACTGGTTTGGT+TGG + chr2.1:18666914-18666933 MS.gene031307:intron 35.0%
!! AAATGGTTTGTGGAGTTTTG+GGG + chr2.1:18670847-18670866 MS.gene031307:CDS 35.0%
!! AATAAGTATTTTTCAGCCGC+CGG - chr2.1:18665813-18665832 None:intergenic 35.0%
!! AGTGGATTCTTTTGCTTGAT+GGG + chr2.1:18670786-18670805 MS.gene031307:CDS 35.0%
!! GATTATTTCTAGCATTGCAG+TGG - chr2.1:18667445-18667464 None:intergenic 35.0%
!! GTTCAAGCTGTTTTCTTTAC+CGG + chr2.1:18664993-18665012 MS.gene031307:CDS 35.0%
!! TCATGTAGAGATTGGTTTCA+AGG - chr2.1:18670662-18670681 None:intergenic 35.0%
!! TCTTACTGTATATTGGTTCC+AGG - chr2.1:18668071-18668090 None:intergenic 35.0%
!!! ACACCCACTAGTTTTTATGT+GGG + chr2.1:18669580-18669599 MS.gene031307:intron 35.0%
!!! AGTTTTGGGGATATTTGGAA+TGG + chr2.1:18670860-18670879 MS.gene031307:CDS 35.0%
!!! CCGTCAATTTTGATTTGGTT+CGG - chr2.1:18665453-18665472 None:intergenic 35.0%
!!! CGTCAATTTTGATTTGGTTC+GGG - chr2.1:18665452-18665471 None:intergenic 35.0%
!!! TAGTGGATTCTTTTGCTTGA+TGG + chr2.1:18670785-18670804 MS.gene031307:CDS 35.0%
AAAATTATCCGTTGCGGGTA+TGG + chr2.1:18665843-18665862 MS.gene031307:intron 40.0%
AACTCCTATAAGCGTTTGCT+AGG - chr2.1:18669698-18669717 None:intergenic 40.0%
AAGAAAAGGTTCCCTCAAAG+TGG + chr2.1:18670011-18670030 MS.gene031307:CDS 40.0%
AAGAGGTTGTGGAATCTTTG+AGG + chr2.1:18667826-18667845 MS.gene031307:intron 40.0%
AAGCACACTCATGTAGAGAT+TGG - chr2.1:18670670-18670689 None:intergenic 40.0%
AATACCAAAGTACACCACTG+AGG - chr2.1:18670622-18670641 None:intergenic 40.0%
ACTGAGTGGAGTTTGATATG+TGG + chr2.1:18664948-18664967 MS.gene031307:CDS 40.0%
ACTTTCTACTTCTTCTCTGG+AGG + chr2.1:18670207-18670226 MS.gene031307:CDS 40.0%
AGAATTATGTAGAGGAGGGA+GGG - chr2.1:18670303-18670322 None:intergenic 40.0%
AGACTTACTCTTGGAGTCAA+TGG + chr2.1:18668197-18668216 MS.gene031307:intron 40.0%
AGACTTACTCTTGGAGTCAA+TGG - chr2.1:18668216-18668197 None:intergenic 40.0%
AGAGATGGAAGAACAAAGGA+TGG - chr2.1:18667467-18667486 None:intergenic 40.0%
AGTACTGTGGAGAATTTGGA+AGG + chr2.1:18664730-18664749 MS.gene031307:CDS 40.0%
ATACTCAAACCTTGTCAACG+TGG - chr2.1:18665483-18665502 None:intergenic 40.0%
ATACTTCTTCATCGAGTGTG+AGG - chr2.1:18670449-18670468 None:intergenic 40.0%
ATCATAGATAGGGATGGCAA+TGG - chr2.1:18666012-18666031 None:intergenic 40.0%
ATCCCTGTTGGATATGAGTA+GGG + chr2.1:18665921-18665940 MS.gene031307:intron 40.0%
ATCGGAAAATGAGGACAATG+TGG - chr2.1:18664646-18664665 None:intergenic 40.0%
ATGACGTGGAAGAGCTTATA+TGG - chr2.1:18667060-18667079 None:intergenic 40.0%
ATGTGACACTTAATGCGAGA+CGG + chr2.1:18666137-18666156 MS.gene031307:intron 40.0%
CAAGGTGTACAATAGCATTC+GGG - chr2.1:18668960-18668979 None:intergenic 40.0%
CACTCCCACATAAAAACTAG+TGG - chr2.1:18669587-18669606 None:intergenic 40.0%
CAGAGATGTAGATGAACTTG+AGG - chr2.1:18666763-18666782 None:intergenic 40.0%
CATTCTCACATGTCTTGCTT+GGG + chr2.1:18664770-18664789 MS.gene031307:CDS 40.0%
CCACCATTGCTTCTTTCAAT+GGG + chr2.1:18670400-18670419 MS.gene031307:CDS 40.0%
CCTGATTGGAAATGTGTTTC+GGG + chr2.1:18664840-18664859 MS.gene031307:CDS 40.0%
CTGATCTTAAAACACGGGTA+CGG + chr2.1:18665518-18665537 MS.gene031307:intron 40.0%
GAACGAACCAATCATACAAC+CGG - chr2.1:18665015-18665034 None:intergenic 40.0%
GAAGGACGAGAATTATGTAG+AGG - chr2.1:18670311-18670330 None:intergenic 40.0%
GACATAGGTCCAATAGTTAG+GGG - chr2.1:18670079-18670098 None:intergenic 40.0%
GACCCTAAAATGAGATGCAA+TGG + chr2.1:18667106-18667125 MS.gene031307:intron 40.0%
GACGAGAATTATGTAGAGGA+GGG - chr2.1:18670307-18670326 None:intergenic 40.0%
GCAGTAATCATAGATAGGGA+TGG - chr2.1:18666018-18666037 None:intergenic 40.0%
GCCTGATTGGAAATGTGTTT+CGG + chr2.1:18664839-18664858 MS.gene031307:CDS 40.0%
GGGAGTTTGATGAGTAATGT+AGG + chr2.1:18670807-18670826 MS.gene031307:CDS 40.0%
GTATCCTAGCAAACGCTTAT+AGG + chr2.1:18669691-18669710 MS.gene031307:intron 40.0%
GTTGCTCAGTTACACGTATT+AGG + chr2.1:18670565-18670584 MS.gene031307:CDS 40.0%
TACCCTACTCATATCCAACA+GGG - chr2.1:18665926-18665945 None:intergenic 40.0%
TACGATGAACAATATTCGGG+GGG + chr2.1:18668829-18668848 MS.gene031307:intron 40.0%
TACTCAAACCTTGTCAACGT+GGG - chr2.1:18665482-18665501 None:intergenic 40.0%
TAGGGAACAAACCACTTTGA+GGG - chr2.1:18670025-18670044 None:intergenic 40.0%
TCATAGATAGGGATGGCAAT+GGG - chr2.1:18666011-18666030 None:intergenic 40.0%
TCATTCTCACATGTCTTGCT+TGG + chr2.1:18664769-18664788 MS.gene031307:CDS 40.0%
TCCACCATTGCTTCTTTCAA+TGG + chr2.1:18670399-18670418 MS.gene031307:CDS 40.0%
TCCACTTTCTACTTCTTCTC+TGG + chr2.1:18670204-18670223 MS.gene031307:CDS 40.0%
TCCAGAGAAGAAGTAGAAAG+TGG - chr2.1:18670208-18670227 None:intergenic 40.0%
TGAGAGAGATGGAAGAACAA+AGG - chr2.1:18667471-18667490 None:intergenic 40.0%
TGATCTTAAAACACGGGTAC+GGG + chr2.1:18665519-18665538 MS.gene031307:intron 40.0%
TGCTATTGTACACCTTGAGA+TGG + chr2.1:18668963-18668982 MS.gene031307:intron 40.0%
TTAACCTCAGTGGTGTACTT+TGG + chr2.1:18670615-18670634 MS.gene031307:CDS 40.0%
TTACCCTACTCATATCCAAC+AGG - chr2.1:18665927-18665946 None:intergenic 40.0%
TTAGGGAACAAACCACTTTG+AGG - chr2.1:18670026-18670045 None:intergenic 40.0%
TTCCTAGAGAAGAGTCTGAA+AGG - chr2.1:18669993-18670012 None:intergenic 40.0%
! ACATTTAAGGGATTGATGGC+TGG + chr2.1:18671113-18671132 MS.gene031307:CDS 40.0%
! AGAGGCATATTTAGTGTCTC+CGG - chr2.1:18671086-18671105 None:intergenic 40.0%
! AGTGTTTGCGTTTTATCTGC+CGG + chr2.1:18671064-18671083 MS.gene031307:CDS 40.0%
! AGTTATTTCCTACGGTTGTG+AGG + chr2.1:18670919-18670938 MS.gene031307:CDS 40.0%
! ATAGAGATGATGCCGATTGA+TGG - chr2.1:18665764-18665783 None:intergenic 40.0%
! CTAAACGGTGGATTTATGGT+TGG + chr2.1:18666698-18666717 MS.gene031307:intron 40.0%
! GACTCTTCTCTAGGAAGAAA+AGG + chr2.1:18669997-18670016 MS.gene031307:CDS 40.0%
! GGAGAAAATCTTGACTGGTT+TGG + chr2.1:18666910-18666929 MS.gene031307:intron 40.0%
! GTGGATTCTTTTGCTTGATG+GGG + chr2.1:18670787-18670806 MS.gene031307:CDS 40.0%
! TGCTTCCTTGCTTCTCTTTT+CGG + chr2.1:18667570-18667589 MS.gene031307:intron 40.0%
! TTGGAAATGTGTTTCGGGTA+CGG + chr2.1:18664845-18664864 MS.gene031307:CDS 40.0%
! TTGTGGTGTCTTACGACTTT+TGG + chr2.1:18667876-18667895 MS.gene031307:intron 40.0%
!! AAACCACTTGAGTTGGTTTG+AGG - chr2.1:18666968-18666987 None:intergenic 40.0%
!! GAGAAGTACTGTGGAGAATT+TGG + chr2.1:18664726-18664745 MS.gene031307:CDS 40.0%
!!! CAATTTTGATTTGGTTCGGG+CGG - chr2.1:18665449-18665468 None:intergenic 40.0%
!!! CACACCCACTAGTTTTTATG+TGG + chr2.1:18669579-18669598 MS.gene031307:intron 40.0%
!!! TGTGGAGTTTTGGGGATATT+TGG + chr2.1:18670855-18670874 MS.gene031307:CDS 40.0%
AACACCACCACTGCTAAAAC+CGG - chr2.1:18670118-18670137 None:intergenic 45.0%
AATCGGCATCATCTCTATGC+TGG + chr2.1:18665766-18665785 MS.gene031307:intron 45.0%
AATGGGAAACACCTTCCAGA+CGG + chr2.1:18670417-18670436 MS.gene031307:CDS 45.0%
ACGCCATGTTTGGAAGATGT+AGG - chr2.1:18670256-18670275 None:intergenic 45.0%
ACTCAAACCTTGTCAACGTG+GGG - chr2.1:18665481-18665500 None:intergenic 45.0%
ACTGTGGAGAATTTGGAAGG+TGG + chr2.1:18664733-18664752 MS.gene031307:CDS 45.0%
AGAACCCGAAAAGAGAAGCA+AGG - chr2.1:18667578-18667597 None:intergenic 45.0%
CACCTTTCAGACTCTTCTCT+AGG + chr2.1:18669988-18670007 MS.gene031307:CDS 45.0%
CAGCATTCTCCCCTAACTAT+TGG + chr2.1:18670067-18670086 MS.gene031307:CDS 45.0%
CATAGATAGGGATGGCAATG+GGG - chr2.1:18666010-18666029 None:intergenic 45.0%
CATCCCTGTTGGATATGAGT+AGG + chr2.1:18665920-18665939 MS.gene031307:intron 45.0%
CATGAGTGTGCTTCTCAATG+CGG + chr2.1:18670677-18670696 MS.gene031307:CDS 45.0%
CCACCTAAAACGACCACAAA+AGG - chr2.1:18670999-18671018 None:intergenic 45.0%
CCCATTGAAAGAAGCAATGG+TGG - chr2.1:18670403-18670422 None:intergenic 45.0%
CCCGAAACACATTTCCAATC+AGG - chr2.1:18664843-18664862 None:intergenic 45.0%
CCTATTGGCCATTCAAAACG+TGG + chr2.1:18670168-18670187 MS.gene031307:CDS 45.0%
CGTTTATTCTTCCTCGAACG+AGG - chr2.1:18670362-18670381 None:intergenic 45.0%
GAATTATGTAGAGGAGGGAG+GGG - chr2.1:18670302-18670321 None:intergenic 45.0%
GAGAATTATGTAGAGGAGGG+AGG - chr2.1:18670304-18670323 None:intergenic 45.0%
GATGTTGCAATTTCAGGAGC+TGG + chr2.1:18669955-18669974 MS.gene031307:intron 45.0%
GGACGAGAATTATGTAGAGG+AGG - chr2.1:18670308-18670327 None:intergenic 45.0%
GTGCTTCCGTTCTGTTATAC+TGG - chr2.1:18668045-18668064 None:intergenic 45.0%
GTGGAGATCATCGGAAAATG+AGG - chr2.1:18664655-18664674 None:intergenic 45.0%
TATAGAGTGCACGCCATGTT+TGG - chr2.1:18670266-18670285 None:intergenic 45.0%
TCGCCTACATCTTCCAAACA+TGG + chr2.1:18670250-18670269 MS.gene031307:CDS 45.0%
TCTATGTGCACGGTACAAAG+AGG + chr2.1:18667809-18667828 MS.gene031307:intron 45.0%
TGATGAGTAATGTAGGGGTG+TGG + chr2.1:18670814-18670833 MS.gene031307:CDS 45.0%
TGTTGTTGGATAGGTTTGGG+AGG + chr2.1:18670733-18670752 MS.gene031307:CDS 45.0%
TTAAAACACGGGTACGGGAA+GGG + chr2.1:18665524-18665543 MS.gene031307:intron 45.0%
TTGGAAGTAGGATATGGGGA+CGG + chr2.1:18665958-18665977 MS.gene031307:intron 45.0%
! AGCATTGCAGTGGACTTGAA+AGG - chr2.1:18667435-18667454 None:intergenic 45.0%
! ATTTCAGGAGCTGGAGTGTT+TGG + chr2.1:18669964-18669983 MS.gene031307:intron 45.0%
! ATTTTCCGTTCCCGCCTTTT+TGG - chr2.1:18664685-18664704 None:intergenic 45.0%
! CACGACGGAGTTATTTCCTA+CGG + chr2.1:18670911-18670930 MS.gene031307:CDS 45.0%
! GCTTCCTTGCTTCTCTTTTC+GGG + chr2.1:18667571-18667590 MS.gene031307:intron 45.0%
! TTGGGGATATTTGGAATGGC+CGG + chr2.1:18670864-18670883 MS.gene031307:CDS 45.0%
! TTTGCGGCATGCGGATTAAT+AGG + chr2.1:18671038-18671057 MS.gene031307:CDS 45.0%
!! CCACGTTTTGAATGGCCAAT+AGG - chr2.1:18670171-18670190 None:intergenic 45.0%
!! CCTTTTGTGGTCGTTTTAGG+TGG + chr2.1:18670996-18671015 MS.gene031307:CDS 45.0%
!! CGGTGTTGTTGGATAGGTTT+GGG + chr2.1:18670730-18670749 MS.gene031307:CDS 45.0%
!! GAGATGCTTGAGAAGTACTG+TGG + chr2.1:18664717-18664736 MS.gene031307:CDS 45.0%
!! TCTTGACTGGTTTGGTTGGT+TGG + chr2.1:18666918-18666937 MS.gene031307:intron 45.0%
!! TTGTGGTCGTTTTAGGTGGT+TGG + chr2.1:18671000-18671019 MS.gene031307:CDS 45.0%
!! AATAAAAAAATATACTATAT+TGG + chr2.1:18666619-18666638 MS.gene031307:intron 5.0%
!! ATTAATTATTATTAAAATGA+AGG + chr2.1:18668151-18668170 MS.gene031307:intron 5.0%
!! ATTAATTATTATTAAAATGA+AGG - chr2.1:18668170-18668151 None:intergenic 5.0%
!! TTAATTATTATTAAAATGAA+GGG + chr2.1:18668152-18668171 MS.gene031307:intron 5.0%
!! TTAATTATTATTAAAATGAA+GGG - chr2.1:18668171-18668152 None:intergenic 5.0%
!!! ATAAATTAAATTTTTACATT+CGG - chr2.1:18665596-18665615 None:intergenic 5.0%
!!! TTCATTTTAATAATAATTAA+TGG + chr2.1:18667364-18667383 MS.gene031307:intron 5.0%
!!! TTCATTTTAATAATAATTAA+TGG - chr2.1:18667383-18667364 None:intergenic 5.0%
ATGCTTCTACGGTGACTGAG+TGG + chr2.1:18664934-18664953 MS.gene031307:CDS 50.0%
CACATGTCTTGCTTGGGCTT+TGG + chr2.1:18664776-18664795 MS.gene031307:CDS 50.0%
CATTCAAAACGTGGCATGGC+AGG + chr2.1:18670177-18670196 MS.gene031307:CDS 50.0%
CGGAGGGAAAGATGCTTCTA+CGG + chr2.1:18664923-18664942 MS.gene031307:CDS 50.0%
CTTAAAACACGGGTACGGGA+AGG + chr2.1:18665523-18665542 MS.gene031307:intron 50.0%
CTTGGGGACTCAGAGACAAA+GGG - chr2.1:18670333-18670352 None:intergenic 50.0%
GACACTTAATGCGAGACGGA+GGG + chr2.1:18666141-18666160 MS.gene031307:intron 50.0%
GCATTACAACATTGCACCGG+CGG + chr2.1:18665794-18665813 MS.gene031307:intron 50.0%
GGAGAGAGTTAGGGACAATG+AGG + chr2.1:18669034-18669053 MS.gene031307:intron 50.0%
GGCAAGAATGGGGGCAATAT+CGG + chr2.1:18670971-18670990 MS.gene031307:CDS 50.0%
GGGAGGAAGCCATTGACAAT+TGG + chr2.1:18670750-18670769 MS.gene031307:CDS 50.0%
GGTCCTCAAACCAACTCAAG+TGG + chr2.1:18666962-18666981 MS.gene031307:intron 50.0%
TCCTACGGTTGTGAGGAATG+CGG + chr2.1:18670926-18670945 MS.gene031307:CDS 50.0%
TCTCCACTCACCGTCCAAAA+AGG + chr2.1:18664668-18664687 MS.gene031307:CDS 50.0%
TCTTGGGGACTCAGAGACAA+AGG - chr2.1:18670334-18670353 None:intergenic 50.0%
TGAATGGCCAATAGGTTCGG+TGG - chr2.1:18670163-18670182 None:intergenic 50.0%
TGACACTTAATGCGAGACGG+AGG + chr2.1:18666140-18666159 MS.gene031307:intron 50.0%
TGCACGGTACAAAGAGGTTG+TGG + chr2.1:18667815-18667834 MS.gene031307:intron 50.0%
TGGAAGTAGGATATGGGGAC+GGG + chr2.1:18665959-18665978 MS.gene031307:intron 50.0%
TGGCCATTCAAAACGTGGCA+TGG + chr2.1:18670173-18670192 MS.gene031307:CDS 50.0%
TTGCTGATAGGCAGCCTGAT+TGG + chr2.1:18664826-18664845 MS.gene031307:CDS 50.0%
TTGTCTCTGAGTCCCCAAGA+TGG + chr2.1:18670334-18670353 MS.gene031307:CDS 50.0%
! ATTCGGGACGGGTTTGTGTA+TGG - chr2.1:18665579-18665598 None:intergenic 50.0%
! CGGTGGATTTATGGTTGGAG+AGG + chr2.1:18666703-18666722 MS.gene031307:intron 50.0%
! CTCGAACGAGGTACCATCTT+GGG - chr2.1:18670350-18670369 None:intergenic 50.0%
! TCGAACGAGGTACCATCTTG+GGG - chr2.1:18670349-18670368 None:intergenic 50.0%
! TGGGGATATTTGGAATGGCC+GGG + chr2.1:18670865-18670884 MS.gene031307:CDS 50.0%
! TTAGGTGGTTGGTTGCCGTT+CGG + chr2.1:18671011-18671030 MS.gene031307:CDS 50.0%
! TTCGGGACGGGTTTGTGTAT+GGG - chr2.1:18665578-18665597 None:intergenic 50.0%
!! CTGCCATGCCACGTTTTGAA+TGG - chr2.1:18670179-18670198 None:intergenic 50.0%
!! GCGCCTTTTGTGGTCGTTTT+AGG + chr2.1:18670993-18671012 MS.gene031307:CDS 50.0%
!! GCGGTGTTGTTGGATAGGTT+TGG + chr2.1:18670729-18670748 MS.gene031307:CDS 50.0%
!! GGAGGCATTGCAATTCTCTC+TGG + chr2.1:18670225-18670244 MS.gene031307:CDS 50.0%
!! GGTTTTAGCAGTGGTGGTGT+TGG + chr2.1:18670117-18670136 MS.gene031307:CDS 50.0%
!! TAACGGCGGTGTTGTTGGAT+AGG + chr2.1:18670724-18670743 MS.gene031307:CDS 50.0%
ACCGTCCAAAAAGGCGGGAA+CGG + chr2.1:18664677-18664696 MS.gene031307:CDS 55.0%
ACGATGCAGGCGGCAAGAAT+GGG + chr2.1:18670960-18670979 MS.gene031307:CDS 55.0%
ACGGGTACGGGAAGGGTAAT+GGG + chr2.1:18665531-18665550 MS.gene031307:intron 55.0%
AGATAGGGATGGCAATGGGG+CGG - chr2.1:18666007-18666026 None:intergenic 55.0%
AGTGTGAGGACAACTCCGTC+TGG - chr2.1:18670435-18670454 None:intergenic 55.0%
ATCCGTTGCGGGTATGGAGA+TGG + chr2.1:18665849-18665868 MS.gene031307:intron 55.0%
CACCACTGCTAAAACCGGTG+AGG - chr2.1:18670113-18670132 None:intergenic 55.0%
CACTCACCGTCCAAAAAGGC+GGG + chr2.1:18664672-18664691 MS.gene031307:CDS 55.0%
CACTGCTAAAACCGGTGAGG+AGG - chr2.1:18670110-18670129 None:intergenic 55.0%
CATGCCGCAAATACCCCGAA+CGG - chr2.1:18671029-18671048 None:intergenic 55.0%
CCAAGATGGTACCTCGTTCG+AGG + chr2.1:18670348-18670367 MS.gene031307:CDS 55.0%
CCACTCACCGTCCAAAAAGG+CGG + chr2.1:18664671-18664690 MS.gene031307:CDS 55.0%
CGGGTTTGTGTATGGGTTCG+TGG - chr2.1:18665571-18665590 None:intergenic 55.0%
GGAAGTAGGATATGGGGACG+GGG + chr2.1:18665960-18665979 MS.gene031307:intron 55.0%
GGACGGTGAGTGGAGATCAT+CGG - chr2.1:18664664-18664683 None:intergenic 55.0%
GGGACTCAGAGACAAAGGGA+AGG - chr2.1:18670329-18670348 None:intergenic 55.0%
TACGATGCAGGCGGCAAGAA+TGG + chr2.1:18670959-18670978 MS.gene031307:CDS 55.0%
TATGTAGAGGAGGGAGGGGA+TGG - chr2.1:18670298-18670317 None:intergenic 55.0%
TCCCATCTCCATACCCGCAA+CGG - chr2.1:18665854-18665873 None:intergenic 55.0%
TCCGTTGCGGGTATGGAGAT+GGG + chr2.1:18665850-18665869 MS.gene031307:intron 55.0%
TGAGGACAACTCCGTCTGGA+AGG - chr2.1:18670431-18670450 None:intergenic 55.0%
TGCTAAAACCGGTGAGGAGG+CGG - chr2.1:18670107-18670126 None:intergenic 55.0%
TTGCGGGTATGGAGATGGGA+CGG + chr2.1:18665854-18665873 MS.gene031307:intron 55.0%
TTGTGAGGAATGCGGCGCTA+GGG + chr2.1:18670934-18670953 MS.gene031307:CDS 55.0%
! ACAGAACGGAAGCACAGTCC+TGG + chr2.1:18668050-18668069 MS.gene031307:intron 55.0%
! CCTCGAACGAGGTACCATCT+TGG - chr2.1:18670351-18670370 None:intergenic 55.0%
! GCGGCATGCGGATTAATAGG+TGG + chr2.1:18671041-18671060 MS.gene031307:CDS 55.0%
! GGCAATATCGGCGCCTTTTG+TGG + chr2.1:18670983-18671002 MS.gene031307:CDS 55.0%
! GGGTTTTCCCCACGTTGACA+AGG + chr2.1:18665471-18665490 MS.gene031307:intron 55.0%
! GTTGCCGTTCGGGGTATTTG+CGG + chr2.1:18671022-18671041 MS.gene031307:CDS 55.0%
! TAGGTGGTTGGTTGCCGTTC+GGG + chr2.1:18671012-18671031 MS.gene031307:CDS 55.0%
! TCCGTTCCCGCCTTTTTGGA+CGG - chr2.1:18664681-18664700 None:intergenic 55.0%
! TTCGGGGTATTTGCGGCATG+CGG + chr2.1:18671029-18671048 MS.gene031307:CDS 55.0%
!!! CTCACCGGTTTTAGCAGTGG+TGG + chr2.1:18670111-18670130 MS.gene031307:CDS 55.0%
!!! CTCCTCACCGGTTTTAGCAG+TGG + chr2.1:18670108-18670127 MS.gene031307:CDS 55.0%
AAGTGTCTGCGGCATGGCAC+CGG + chr2.1:18664884-18664903 MS.gene031307:CDS 60.0%
AATCTGATCCCCGTCCCCGA+CGG - chr2.1:18665892-18665911 None:intergenic 60.0%
ACGGGGATACCTGAACCCGT+CGG + chr2.1:18665873-18665892 MS.gene031307:intron 60.0%
AGTCGTGGGAGTGGATCGGA+GGG + chr2.1:18664907-18664926 MS.gene031307:CDS 60.0%
ATACCTGAACCCGTCGGGGA+CGG + chr2.1:18665879-18665898 MS.gene031307:intron 60.0%
CACGGGTACGGGAAGGGTAA+TGG + chr2.1:18665530-18665549 MS.gene031307:intron 60.0%
CATGCCGCAGACACTTCCAC+CGG - chr2.1:18664880-18664899 None:intergenic 60.0%
CGATGCAGGCGGCAAGAATG+GGG + chr2.1:18670961-18670980 MS.gene031307:CDS 60.0%
CGGGTACGGGAAGGGTAATG+GGG + chr2.1:18665532-18665551 MS.gene031307:intron 60.0%
GAGGAGGCGGAGGAAGACAT+AGG - chr2.1:18670094-18670113 None:intergenic 60.0%
GATAGGGATGGCAATGGGGC+GGG - chr2.1:18666006-18666025 None:intergenic 60.0%
GATGCAGGCGGCAAGAATGG+GGG + chr2.1:18670962-18670981 MS.gene031307:CDS 60.0%
GATGCCAGCGTTCGCGGTAA+CGG + chr2.1:18670707-18670726 MS.gene031307:CDS 60.0%
GCCGCATTCCTCACAACCGT+AGG - chr2.1:18670930-18670949 None:intergenic 60.0%
GTCCTCGCCACCGAACCTAT+TGG + chr2.1:18670153-18670172 MS.gene031307:CDS 60.0%
GTTGTGAGGAATGCGGCGCT+AGG + chr2.1:18670933-18670952 MS.gene031307:CDS 60.0%
TAAAACCGGTGAGGAGGCGG+AGG - chr2.1:18670104-18670123 None:intergenic 60.0%
TGCGGGTATGGAGATGGGAC+GGG + chr2.1:18665855-18665874 MS.gene031307:intron 60.0%
! AGGTGGTTGGTTGCCGTTCG+GGG + chr2.1:18671013-18671032 MS.gene031307:CDS 60.0%
! CCGCCTTTTTGGACGGTGAG+TGG - chr2.1:18664674-18664693 None:intergenic 60.0%
! GCTAGGGAGTACGATGCAGG+CGG + chr2.1:18670950-18670969 MS.gene031307:CDS 60.0%
!! TTGGTTCGGGCGGATACCCA+CGG - chr2.1:18665439-18665458 None:intergenic 60.0%
ATCTGATCCCCGTCCCCGAC+GGG - chr2.1:18665891-18665910 None:intergenic 65.0%
CCGATCCACTCCCACGACTC+CGG - chr2.1:18664906-18664925 None:intergenic 65.0%
CCGGAGTCGTGGGAGTGGAT+CGG + chr2.1:18664903-18664922 MS.gene031307:CDS 65.0%
CGCAGAGATGCCAGCGTTCG+CGG + chr2.1:18670701-18670720 MS.gene031307:CDS 65.0%
CGGGGATACCTGAACCCGTC+GGG + chr2.1:18665874-18665893 MS.gene031307:intron 65.0%
GAGTCGTGGGAGTGGATCGG+AGG + chr2.1:18664906-18664925 MS.gene031307:CDS 65.0%
GATGGCAATGGGGCGGGATG+GGG - chr2.1:18666000-18666019 None:intergenic 65.0%
GCGGGTATGGAGATGGGACG+GGG + chr2.1:18665856-18665875 MS.gene031307:intron 65.0%
GGATGGCAATGGGGCGGGAT+GGG - chr2.1:18666001-18666020 None:intergenic 65.0%
GGGGATACCTGAACCCGTCG+GGG + chr2.1:18665875-18665894 MS.gene031307:intron 65.0%
GTAGAGGAGGGAGGGGATGG+AGG - chr2.1:18670295-18670314 None:intergenic 65.0%
GTCTTCCTCCGCCTCCTCAC+CGG + chr2.1:18670096-18670115 MS.gene031307:CDS 65.0%
TACCTGAACCCGTCGGGGAC+GGG + chr2.1:18665880-18665899 MS.gene031307:intron 65.0%
! GGCGCTAGGGAGTACGATGC+AGG + chr2.1:18670947-18670966 MS.gene031307:CDS 65.0%
! TGGCGAGGACGAAGGCGCAA+AGG - chr2.1:18670143-18670162 None:intergenic 65.0%
! TGGTTCGGGCGGATACCCAC+GGG - chr2.1:18665438-18665457 None:intergenic 65.0%
!! AGGTTCGGTGGCGAGGACGA+AGG - chr2.1:18670151-18670170 None:intergenic 65.0%
!! CGCGGTAACGGCGGTGTTGT+TGG + chr2.1:18670719-18670738 MS.gene031307:CDS 65.0%
!! CGGTGGAAGTGTCTGCGGCA+TGG + chr2.1:18664878-18664897 MS.gene031307:CDS 65.0%
!! GGCCAATAGGTTCGGTGGCG+AGG - chr2.1:18670158-18670177 None:intergenic 65.0%
ACCGCCGTTACCGCGAACGC+TGG - chr2.1:18670714-18670733 None:intergenic 70.0%
ACCTGAACCCGTCGGGGACG+GGG + chr2.1:18665881-18665900 MS.gene031307:intron 70.0%
GAGGAGGGAGGGGATGGAGG+CGG - chr2.1:18670292-18670311 None:intergenic 70.0%
GCCGCAGACACTTCCACCGG+CGG - chr2.1:18664877-18664896 None:intergenic 70.0%
GGGATGGCAATGGGGCGGGA+TGG - chr2.1:18666002-18666021 None:intergenic 70.0%
TCGGGTACGGAGTGTGCCGC+CGG + chr2.1:18664858-18664877 MS.gene031307:CDS 70.0%
! CGGCATGGCACCGGAGTCGT+GGG + chr2.1:18664893-18664912 MS.gene031307:CDS 70.0%
! GCCAGCGTTCGCGGTAACGG+CGG + chr2.1:18670710-18670729 MS.gene031307:CDS 70.0%
! TGGCACCGGAGTCGTGGGAG+TGG + chr2.1:18664898-18664917 MS.gene031307:CDS 70.0%
!! GCCGCCGGTGGAAGTGTCTG+CGG + chr2.1:18664873-18664892 MS.gene031307:CDS 70.0%
GGTACGGAGTGTGCCGCCGG+TGG + chr2.1:18664861-18664880 MS.gene031307:CDS 75.0%
! GCGGCATGGCACCGGAGTCG+TGG + chr2.1:18664892-18664911 MS.gene031307:CDS 75.0%
! TCCCCGTCCCCGACGGGTTC+AGG - chr2.1:18665885-18665904 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 18664636 18671145 18664636 ID=MS.gene031307
chr2.1 mRNA 18664636 18671145 18664636 ID=MS.gene031307.t1;Parent=MS.gene031307
chr2.1 exon 18664636 18665026 18664636 ID=MS.gene031307.t1.exon1;Parent=MS.gene031307.t1
chr2.1 CDS 18664636 18665026 18664636 ID=cds.MS.gene031307.t1;Parent=MS.gene031307.t1
chr2.1 exon 18669971 18671145 18669971 ID=MS.gene031307.t1.exon2;Parent=MS.gene031307.t1
chr2.1 CDS 18669971 18671145 18669971 ID=cds.MS.gene031307.t1;Parent=MS.gene031307.t1
Gene Sequence

>MS.gene031307

ATGGCGGCCACATTGTCCTCATTTTCCGATGATCTCCACTCACCGTCCAAAAAGGCGGGAACGGAAAATATCTGCATCGATGAGATGCTTGAGAAGTACTGTGGAGAATTTGGAAGGTGGCAGTTGAAACACTTCATTCTCACATGTCTTGCTTGGGCTTTGGAAGCTTTTCACACTATGGTTATGATTTTTGCTGATAGGCAGCCTGATTGGAAATGTGTTTCGGGTACGGAGTGTGCCGCCGGTGGAAGTGTCTGCGGCATGGCACCGGAGTCGTGGGAGTGGATCGGAGGGAAAGATGCTTCTACGGTGACTGAGTGGAGTTTGATATGTGGTGACAAGTTTAAAGTTGGACTTGTTCAAGCTGTTTTCTTTACCGGTTGTATGATTGGTTCGTTCACTCTTTTCTCTTCTCTTCTACAATTTGATCATATTTAATCATATCAACTAGTTCAAACTACTTCTAACCATATGTCAATGTGAATTAATCATAATTGATACTCCAATAACTATAATTAATACCTTTTAAAGGTATGTATTTTGATAAGTCGACATTGCTGGTTTTTTTTAAGAATAACATGCCTAAAAACTACTTCTTCCATCTCACTTTATGTGTTCTACTTCAAAAAAAAAAAAAAATTGTCTCAAATGATTTGTCCTTTTTATAATAGAAATACACTAACATATCCTTATTTATTATATTTCAATCATCTATAATTAGGCATGTCAACAAAATCCATACATATCTTCCCTAAAAAAAAAAAATCATACCAGTTTCCCTCAAAAAAAAAAAATCATACCCGTGGGTATCCGCCCGAACCAAATCAAAATTGACGGGTTTTCCCCACGTTGACAAGGTTTGAGTATGTGTTTGGGTTTTTTCTGATCTTAAAACACGGGTACGGGAAGGGTAATGGGGATAGAAGCACACACCACGAACCCATACACAAACCCGTCCCGAATGTAAAAATTTAATTTATTATTAATTTGTATAAATAGAAACTCAAACTCCAAATCATTTCACTCATACAATCAAAGTTTTGTCAGATGACACTCACTTCTCTGAGTTCTCTCTCTTCTTCGTCCATATATCACAAAATTTCGATCTCTCTCTTCTTCATATAGCCATCAATCGGCATCATCTCTATGCTGGATAATGCATTACAACATTGCACCGGCGGCTGAAAAATACTTATTTTTTATTAAAAAAATTATCCGTTGCGGGTATGGAGATGGGACGGGGATACCTGAACCCGTCGGGGACGGGGATCAGATTCAATTTTTCATCCCTGTTGGATATGAGTAGGGTAACAAGTAAATATTTGGAAGTAGGATATGGGGACGGGGAATGTAAAACTCATCCCCATCCCGCCCCATTGCCATCCCTATCTATGATTACTGCACTAACTATAATTAATAATGATGTTTTAGTAAATGATACATATTTTGCCATTAAAATCAACATTATTAATCATTTTCTTAATAATCGTGTAAAACTCAAATGTGACACTTAATGCGAGACGGAGGGAGTAGTAAACTCTAAAAGTTAATAAAAAGAAAATATAATATAGTTATTTATACAAATAACTTAGTTGGTAGATATTGCATTTTGTATGTAGAGTTAAAGTTCAGATTCAGATTCTTTATTTAATCATCTTAAGAGATGAATTTATAGTCACTAACTTGACAAAAAAAAAATTTAACCTTATCCTTATTGGTTTGTGATCTCTTTTTTTCTTTTTTTGGTAAAATGGCTTGCAATCACTCTTTTTTTTATTTTATTTTGTCATAGATAGATGAACCATTAAACCTTATACAAATTAAATGAAGTTCGACCTAACAATTTTGACATTTTTTTTGTGACATTTTTGTTAATTGAGCTAGAATTTGTGAAAAATGACAATTCATCATATTATCACATATATTTTATTTAAAACTACGTCTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAAAAAATATACTATATTGGTTGTCGTTGTAAACGATATTACACTAATAATACATATTTCATTCATTTTCTCATAGCTAAACGGTGGATTTATGGTTGGAGAGGTTGCATATAAGTCAATTATCAATTAATAGAGGATCCTCAAGTTCATCTACATCTCTGACATTGTTAATAAATATGTTTGGTTTAGAATAGAAAGTGAAAGAAAAAAATTATATAAGGAAAGAAAGTGGAAAGTGAAAGGATATTTTTAGTTGTTTTGAATAAGTGAAAAAGAATGGATTGAATTGGAGAAAATCTTGACTGGTTTGGTTGGTTGGATGAAAATTCTTCTCTTTATTGGTCCTCAAACCAACTCAAGTGGTTTATGTGATCAAATTAATAATAACATGTCACCGCTTATTAGACATTTTTTGATGACTTGAATGTTCACTGACCATATAAGCTCTTCCACGTCATTAATGAATATGTCACATCAATGAAATGACCCTAAAATGAGATGCAATGGAAAAAAAATTATAACAAGGTGAAATTTGAGATAAAAATTGATTTTTAAAATGTGTGTTCCAAAACTCAAATTTTTTTTTCAAGAGTAATGCTATTGGAACACAAATAACTGAAACTATACAACACATGTGTACGATTCACTGTATTTATACTTACAGTGAACGATATATTTTTTTAAGAGGAGGGATCCATTGACTCCAAGAGTAAGTCTAAAGACTTACTCCAAATCTTGACCCTTCATTTTAATAATAATTAATGGTTGTGATTAATTCATAATAATTGTTAAGGTGGGGTGCTTTTAACTCCTTTCAAGTCCACTGCAATGCTAGAAATAATCCATCCTTTGTTCTTCCATCTCTCTCAACCCTTTTTTTCTTTCAATTTTCAATCGTTCCTATTCTTCTATCTCTCTCAACCCTTTTGATTTCTTTCAATTTTCAAATGCTTCCTTGCTTCTCTTTTCGGGTTCTTCACTAGTCTATGATTCGATTCTTTATTAGGGTTCTTTCAATTTTCAAATGCTTCCTTGCTTCTCTTTTCGGGTTCTTCACTAGTCTATGATTCGATTCTTTATTAGGGTTCTTCATAGTGAAAATTATGGGTTTTTTTTCTTCCTCCAAAAATATCATTAGGGTTAATCTGATACACAATTATTTTATTGTTATTTTATAAGAAATTAGGTCTATGTGCACGGTACAAAGAGGTTGTGGAATCTTTGAGGAACTTAAATTAATTGGTTATTGCTATTTTGTGGTGTCTTACGACTTTTGGATCATTGGATGATGGCATAGAACACTATTTTTTTCAATTGATTAATTCAAACCTTGTTGACAAAAAATATGAGATAAAACAAAGGAAAGTTTAATGGTCATATAACAGCAAAACCCACGACAAGCATTTCAACAAAAATAAGTCCAGTATAACAGAACGGAAGCACAGTCCTGGAACCAATATACAGTAAGATAGATGTGTGGATAGAGCAAAACACCCCACCTTAACAATTATTATGAATTAATCACAACCATTAATTATTATTAAAATGAAGGGTCAAGATTTGGAGTAAGTCTTTAGACTTACTCTTGGAGTCAATGGATCCCTCCTCTTTTTTTAAACTTGTTTTTTATTATAGAGGATGATTTTTGTCACTAAAATTGAGTTGCGTCATTAACCGATTTTACTAAGTTATTTATCAAAAACATGTATGTTCTAACCTTTTTTTTTAAGATAAATCTCTTTATCATTTTGACAACTTCATTAACCACAAAAATGCAAGACATTAACAACTCATTTTACAAAATTTCAAAAAATTCTCTCAAAAAAAAAAATTCAAAAACTTTAAAATAAAATTCACATTACATAGATTTATATAAACAAAGTGGTGGGACATACAATGATTTCTTCCAATAAATGAGTGAGTGTTAGAGAGAGTGTTGAAAAGTGAGTGTTGCTAGCATTCCTCTTTATTTAAAGTAAAAGGTTAATGCATTGCATTTTTTGTGGTTAATGAAATAGTCAAAGTGATTAATGAGATTTATATTAAAAAAGGGGTTAACATCGTACATTTTGTGGTTAATGAAGTTGTGAAATTGATTAATGATGCAATTCAATTTTGTGATACAAAATCCTCCTTTATATTAAAAAAAATATTATTTTTGAAAGAAAAAAAGAGTGACTAAAATATATATTTGTTCATCACATAAATACGATGAACAATATTCGGGGGGTGCATTGTTTTCAATTATATGTTTCGATAACATTATTGTTTTTGAAAATAGAGAGATTAAAAATATATTTAAGCCAATATTTTTAAGGAAAAATTTTCTTAGACACCCGAATGCTATTGTACACCTTGAGATGGATTAGAGATAGAAGAAAAAGAAGAGAGAGGAAAGTGATGATATATTACGGAGAGAGTTAGGGACAATGAGGTGTTTTCAATGAGTGTTGATTTTTGTAAGGGTGTTAATTATAATGACCACTCTATTTTAATTATGTATGAGAAGTTAAGAACCAATATCAATCTAATTGAGCAATGTTATTTGAACATCAATTTGATTGACAACCACATTAACAACCATATTTTTACAAAGAAAATTATGTATTGACACAAAAACCAAAACAATAGAGAAAGAAAATAAAAATATAATATGAATATGAGAGAGAAAGTTGTTATAAAAGTTGTTAAAAAATGGTTGTACAAATATCATTTCTCATCTAATTAGAGACATTTGTTTAAAAAAGAGGTGTCGCACATTGTCTTTTTCTTTTGGTTATCAAGGCCATGTGCTATTGTTCCATGAAAGCCTCATTTATGTTTCTCTCATGATTTTAACCGACAAACATTACAAATATTCCGTAAAAAGCAAAACACTACATATATTACATTATATATATATATATATATATATATATATATATATATATATATATATATATATGGATTTGCTATAACACACCCACTAGTTTTTATGTGGGAGTGTTTTAGCAAGCTACACCTTAAGGTGTATTTAACTACTTTTTAGTTATAACTTGTTAAAACACACCTTCTAAAAAATAAGTGGGTGTATCCTAGCAAACGCTTATAGGAGTTGCTAACATACACCCACTTATTTTTTAGAAGGTGTGTTTTAGCAACATTCACCTTAAGATGTATTTAACAACTTTTTAGTTATATATTTGCTAAAACACACCTTAATAAAAAGAAGTGGGTGTATCCTAGCAAAAAAACATATATGAAGAAAAAAACATAATTATACACTCGTGATTAAAGAAGTTATTACAAGTTTTTCCATTTGCTGAATAATATTCATATGGCATAAAAGATTTTGATGTTGCAATTTCAGGAGCTGGAGTGTTTGGTCACCTTTCAGACTCTTCTCTAGGAAGAAAAGGTTCCCTCAAAGTGGTTTGTTCCCTAAATGCCATATTTGGTTGTTTAACAGCATTCTCCCCTAACTATTGGACCTATGTCTTCCTCCGCCTCCTCACCGGTTTTAGCAGTGGTGGTGTTGGCCTTTGCGCCTTCGTCCTCGCCACCGAACCTATTGGCCATTCAAAACGTGGCATGGCAGGAATGTCCACTTTCTACTTCTTCTCTGGAGGCATTGCAATTCTCTCTGGTATCGCCTACATCTTCCAAACATGGCGTGCACTCTATATCGCCGCCTCCATCCCCTCCCTCCTCTACATAATTCTCGTCCTTCCCTTTGTCTCTGAGTCCCCAAGATGGTACCTCGTTCGAGGAAGAATAAACGAAGCAACTGCACTCATGTCCACCATTGCTTCTTTCAATGGGAAACACCTTCCAGACGGAGTTGTCCTCACACTCGATGAAGAAGTATCAAATTCAAACAAATCATCAAGTGATCTTGAATACAACCTAATTAGCTACGTGGAAAATAAGAATGCACAAGTTGGATCCATTGTAGATGTGATTTGTTGCTCAGTTACACGTATTAGGTTATTTCTAGCGATAACTATTAACTTCTTAACCTCAGTGGTGTACTTTGGTATTAGCTTAAATGTTACAAACCTTGAAACCAATCTCTACATGAGTGTGCTTCTCAATGCGGTCGCAGAGATGCCAGCGTTCGCGGTAACGGCGGTGTTGTTGGATAGGTTTGGGAGGAAGCCATTGACAATTGGAACAATGTGGTTTAGTGGATTCTTTTGCTTGATGGGGAGTTTGATGAGTAATGTAGGGGTGTGGAAAGTAATTAAAATGGTTTGTGGAGTTTTGGGGATATTTGGAATGGCCGGGACTTATAATTTGTTGTATATTTACACGACGGAGTTATTTCCTACGGTTGTGAGGAATGCGGCGCTAGGGAGTACGATGCAGGCGGCAAGAATGGGGGCAATATCGGCGCCTTTTGTGGTCGTTTTAGGTGGTTGGTTGCCGTTCGGGGTATTTGCGGCATGCGGATTAATAGGTGGAGTGTTTGCGTTTTATCTGCCGGAGACACTAAATATGCCTCTTTATGATACATTTAAGGGATTGATGGCTGGACTTGCATGA
Protein sequence

>MS.gene031307.t1

MAATLSSFSDDLHSPSKKAGTENICIDEMLEKYCGEFGRWQLKHFILTCLAWALEAFHTMVMIFADRQPDWKCVSGTECAAGGSVCGMAPESWEWIGGKDASTVTEWSLICGDKFKVGLVQAVFFTGCMIGAGVFGHLSDSSLGRKGSLKVVCSLNAIFGCLTAFSPNYWTYVFLRLLTGFSSGGVGLCAFVLATEPIGHSKRGMAGMSTFYFFSGGIAILSGIAYIFQTWRALYIAASIPSLLYIILVLPFVSESPRWYLVRGRINEATALMSTIASFNGKHLPDGVVLTLDEEVSNSNKSSSDLEYNLISYVENKNAQVGSIVDVICCSVTRIRLFLAITINFLTSVVYFGISLNVTNLETNLYMSVLLNAVAEMPAFAVTAVLLDRFGRKPLTIGTMWFSGFFCLMGSLMSNVGVWKVIKMVCGVLGIFGMAGTYNLLYIYTTELFPTVVRNAALGSTMQAARMGAISAPFVVVLGGWLPFGVFAACGLIGGVFAFYLPETLNMPLYDTFKGLMAGLA