AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene98665


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98665.t1 MTR_7g446340 98.679 530 7 0 1 530 1 530 0.0 1057
MS.gene98665.t1 MTR_6g007340 98.679 530 7 0 1 530 1 530 0.0 1057
MS.gene98665.t1 MTR_2g013310 65.835 521 173 1 4 524 7 522 0.0 697
MS.gene98665.t1 MTR_2g013310 68.374 449 142 0 76 524 1 449 0.0 627
MS.gene98665.t1 MTR_3g116240 49.688 481 222 4 42 502 11 491 6.32e-164 475
MS.gene98665.t1 MTR_4g069500 47.732 507 244 6 41 527 12 517 7.02e-164 475
MS.gene98665.t1 MTR_6g088450 47.447 470 242 2 30 494 33 502 4.70e-161 468
MS.gene98665.t1 MTR_4g072030 46.967 511 249 6 36 529 13 518 2.60e-160 466
MS.gene98665.t1 MTR_8g103500 46.781 466 240 5 45 502 6 471 7.03e-150 439
MS.gene98665.t1 MTR_4g069500 47.863 468 227 5 76 527 1 467 1.27e-149 437
MS.gene98665.t1 MTR_8g077890 44.200 500 263 5 38 521 2 501 9.72e-148 433
MS.gene98665.t1 MTR_5g075300 44.919 492 252 6 41 515 5 494 2.89e-144 424
MS.gene98665.t1 MTR_5g019870 38.066 486 283 4 49 517 9 493 5.20e-111 339
MS.gene98665.t1 MTR_4g069500 45.289 329 163 5 215 527 1 328 3.65e-88 275
MS.gene98665.t1 MTR_3g084110 34.255 470 289 7 54 514 27 485 7.85e-79 256
MS.gene98665.t1 MTR_1g116660 33.682 478 296 6 37 505 20 485 1.15e-75 248
MS.gene98665.t1 MTR_7g082270 34.016 488 297 10 18 499 31 499 3.24e-72 239
MS.gene98665.t1 MTR_6g018790 33.671 493 304 10 18 505 71 545 1.63e-70 235
MS.gene98665.t1 MTR_1g116650 31.942 479 290 6 37 505 63 515 4.64e-70 234
MS.gene98665.t1 MTR_7g005910 32.272 471 298 8 46 505 22 482 2.18e-69 231
MS.gene98665.t1 MTR_4g077740 28.797 507 319 12 17 499 9 497 2.57e-65 220
MS.gene98665.t1 MTR_5g020270 29.341 501 312 11 17 503 17 489 7.56e-65 219
MS.gene98665.t1 MTR_8g077310 32.018 456 279 9 55 499 47 482 1.24e-62 213
MS.gene98665.t1 MTR_7g113970 30.862 499 287 12 28 500 27 493 1.50e-62 213
MS.gene98665.t1 MTR_5g077580 28.986 552 269 11 54 505 25 553 5.94e-61 210
MS.gene98665.t1 MTR_7g113960 28.968 504 315 11 21 515 2 471 1.93e-60 207
MS.gene98665.t1 MTR_5g020270 31.796 412 244 9 106 503 1 389 2.05e-60 204
MS.gene98665.t1 MTR_7g082270 34.033 429 258 10 18 440 31 440 3.14e-60 206
MS.gene98665.t1 MTR_8g077310 33.007 409 235 9 106 499 1 385 1.34e-58 199
MS.gene98665.t1 MTR_8g077300 29.167 504 313 10 16 502 1 477 1.80e-58 201
MS.gene98665.t1 MTR_1g022315 30.043 466 284 8 55 503 49 489 6.60e-58 200
MS.gene98665.t1 MTR_7g094450 29.630 486 311 12 21 499 9 470 6.09e-57 197
MS.gene98665.t1 MTR_4g118610 30.894 492 309 9 19 499 12 483 6.79e-57 197
MS.gene98665.t1 MTR_5g020270 28.144 501 297 13 17 503 17 468 1.72e-56 196
MS.gene98665.t1 MTR_2g020710 29.857 489 315 10 19 499 12 480 3.03e-55 193
MS.gene98665.t1 MTR_7g094110 29.498 478 300 11 28 499 26 472 3.21e-55 193
MS.gene98665.t1 MTR_1g022315 31.084 415 244 8 106 503 1 390 4.66e-54 187
MS.gene98665.t1 MTR_2g020710 32.512 406 249 8 100 499 5 391 7.83e-52 182
MS.gene98665.t1 MTR_1g104750 26.844 488 318 8 55 514 23 499 1.90e-50 181
MS.gene98665.t1 MTR_2g026160 32.520 369 222 7 42 391 6 366 6.17e-50 181
MS.gene98665.t1 MTR_2g026160 41.304 92 54 0 413 504 467 558 1.79e-14 76.6
MS.gene98665.t1 MTR_1g104770 27.629 485 310 9 51 506 20 492 1.41e-49 178
MS.gene98665.t1 MTR_3g074410 26.141 482 310 12 55 505 26 492 1.51e-49 178
MS.gene98665.t1 MTR_2g049020 34.535 333 210 5 54 382 25 353 2.13e-49 179
MS.gene98665.t1 MTR_2g049020 43.750 96 54 0 410 505 461 556 5.58e-17 84.3
MS.gene98665.t1 MTR_0009s0370 28.056 499 313 12 51 517 18 502 3.21e-49 177
MS.gene98665.t1 MTR_3g008160 25.786 477 319 10 55 506 24 490 5.49e-49 177
MS.gene98665.t1 MTR_8g102860 27.183 504 322 12 47 520 19 507 7.91e-49 176
MS.gene98665.t1 MTR_5g006070 26.253 499 325 11 55 524 23 507 7.99e-49 176
MS.gene98665.t1 MTR_3g080240 29.065 492 319 13 21 499 54 528 1.98e-48 176
MS.gene98665.t1 MTR_8g102860 29.927 411 264 9 120 520 59 455 2.89e-48 174
MS.gene98665.t1 MTR_3g008160 27.007 411 286 6 101 506 40 441 2.41e-47 171
MS.gene98665.t1 MTR_5g006070 26.984 441 297 9 94 524 34 459 2.64e-47 171
MS.gene98665.t1 MTR_6g087040 27.406 478 311 12 54 505 25 492 5.28e-47 171
MS.gene98665.t1 MTR_6g088375 27.406 478 311 12 54 505 25 492 5.28e-47 171
MS.gene98665.t1 MTR_0204s0020 26.148 501 322 11 36 505 2 485 6.28e-47 171
MS.gene98665.t1 MTR_7g094110 28.330 473 292 10 28 499 26 452 7.56e-47 170
MS.gene98665.t1 MTR_0204s0020 25.956 497 325 11 36 505 2 482 1.35e-46 170
MS.gene98665.t1 MTR_5g041550 26.446 484 317 11 51 505 20 493 1.65e-46 170
MS.gene98665.t1 MTR_3g023480 27.470 506 325 11 51 526 18 511 5.52e-46 169
MS.gene98665.t1 MTR_1g104780 25.963 493 315 10 62 520 29 505 1.18e-45 168
MS.gene98665.t1 MTR_4g064820 30.848 389 231 8 45 407 86 462 1.64e-45 167
MS.gene98665.t1 MTR_1g038600 27.527 465 310 10 54 505 22 472 4.87e-45 166
MS.gene98665.t1 MTR_4g090600 27.345 501 315 12 54 516 22 511 1.54e-44 164
MS.gene98665.t1 MTR_3g074270 27.311 476 301 12 43 498 12 462 1.56e-44 164
MS.gene98665.t1 MTR_4g091370 27.202 511 320 12 45 516 14 511 2.21e-44 164
MS.gene98665.t1 MTR_1g038630 26.653 484 308 11 54 505 22 490 5.59e-44 163
MS.gene98665.t1 MTR_3g007910 25.873 487 310 10 38 505 6 460 6.44e-44 162
MS.gene98665.t1 MTR_0204s0040 25.963 493 315 11 45 505 19 493 1.02e-43 162
MS.gene98665.t1 MTR_2g048720 33.143 350 222 6 54 398 25 367 1.80e-43 162
MS.gene98665.t1 MTR_4g116770 25.963 493 315 11 45 505 215 689 5.81e-43 163
MS.gene98665.t1 MTR_8g077310 31.335 367 225 7 55 413 47 394 2.70e-42 156
MS.gene98665.t1 MTR_3g008170 25.102 490 330 11 45 506 11 491 5.14e-42 157
MS.gene98665.t1 MTR_3g093060 26.014 419 292 8 101 511 42 450 6.54e-42 156
MS.gene98665.t1 MTR_4g116790 24.458 507 343 11 45 525 17 509 7.47e-42 157
MS.gene98665.t1 MTR_3g074390 25.364 481 317 12 51 502 25 492 8.80e-42 157
MS.gene98665.t1 MTR_4g013205 28.750 480 304 11 33 500 17 470 1.01e-41 156
MS.gene98665.t1 MTR_2g020710 28.947 418 270 9 19 428 12 410 4.65e-41 153
MS.gene98665.t1 MTR_6g087910 29.200 500 304 16 24 500 12 484 5.54e-41 154
MS.gene98665.t1 MTR_2g020710 29.017 417 269 9 19 427 12 409 1.13e-40 152
MS.gene98665.t1 MTR_5g094760 23.935 493 337 9 39 505 11 491 3.26e-40 152
MS.gene98665.t1 MTR_4g118610 28.979 421 269 8 19 428 12 413 3.84e-40 151
MS.gene98665.t1 MTR_2g026140 31.161 353 213 8 47 390 19 350 2.40e-39 151
MS.gene98665.t1 MTR_3g093010 25.052 479 309 10 62 505 29 492 6.93e-39 149
MS.gene98665.t1 MTR_7g113970 28.095 420 248 10 28 421 27 418 2.48e-38 145
MS.gene98665.t1 MTR_7g091690 23.887 494 338 9 38 505 10 491 1.32e-37 145
MS.gene98665.t1 MTR_2g020710 27.151 372 255 4 19 389 12 368 2.27e-36 139
MS.gene98665.t1 MTR_5g082540 25.203 492 326 11 42 505 13 490 2.68e-36 141
MS.gene98665.t1 MTR_7g113960 25.831 391 255 8 21 404 2 364 1.97e-34 134
MS.gene98665.t1 MTR_3g116060 32.906 234 154 3 53 285 2 233 2.05e-31 129
MS.gene98665.t1 MTR_3g116060 31.200 250 156 7 265 502 472 717 1.72e-21 99.0
MS.gene98665.t1 MTR_3g074320 28.302 318 206 8 213 520 31 336 4.70e-31 123
MS.gene98665.t1 MTR_3g074340 27.987 318 207 8 213 520 31 336 8.81e-31 122
MS.gene98665.t1 MTR_3g074370 28.667 300 194 6 213 502 31 320 6.20e-30 120
MS.gene98665.t1 MTR_3g074380 25.496 353 231 9 51 382 23 364 1.00e-29 120
MS.gene98665.t1 MTR_5g024740 32.787 244 155 7 55 295 4 241 7.73e-29 121
MS.gene98665.t1 MTR_5g024740 31.687 243 151 7 287 517 487 726 3.59e-19 91.7
MS.gene98665.t1 MTR_4g116790 24.157 356 242 6 45 381 17 363 1.09e-28 117
MS.gene98665.t1 MTR_5g044910 31.967 244 157 6 55 295 4 241 1.52e-27 117
MS.gene98665.t1 MTR_5g044910 31.416 226 142 6 287 502 485 707 2.92e-19 92.0
MS.gene98665.t1 MTR_8g073100 32.618 233 151 5 53 280 2 233 3.32e-26 113
MS.gene98665.t1 MTR_8g073100 26.906 223 152 2 289 502 485 705 1.78e-14 76.6
MS.gene98665.t1 MTR_3g118530 33.178 214 128 5 66 276 15 216 4.02e-26 112
MS.gene98665.t1 MTR_3g118530 33.178 214 128 5 66 276 15 216 5.40e-26 112
MS.gene98665.t1 MTR_3g118530 34.071 226 136 5 287 502 505 727 1.97e-23 105
MS.gene98665.t1 MTR_3g074400 22.087 412 267 13 101 492 39 416 1.28e-17 85.5
MS.gene98665.t1 MTR_1g074940 26.531 294 198 9 213 495 214 500 9.69e-16 80.5
MS.gene98665.t1 MTR_5g096000 28.571 168 118 2 38 204 6 172 5.78e-13 70.1
MS.gene98665.t1 MTR_5g077590 45.783 83 45 0 410 492 304 386 1.77e-12 69.7
MS.gene98665.t1 MTR_4g081490 25.679 405 237 21 113 495 71 433 1.84e-12 69.7
MS.gene98665.t1 MTR_1g069935 22.148 447 293 15 99 499 75 512 6.09e-12 68.6
MS.gene98665.t1 MTR_3g082700 23.608 449 273 15 104 495 76 511 7.29e-12 68.2
MS.gene98665.t1 MTR_4g064807 39.474 76 46 0 424 499 1 76 3.77e-11 59.7
MS.gene98665.t1 MTR_4g005090 24.887 442 249 19 106 497 80 488 7.44e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene98665.t1 AT2G20780 70.667 525 142 4 5 525 7 523 0.0 748
MS.gene98665.t1 AT2G20780 73.529 442 115 1 84 525 26 465 0.0 666
MS.gene98665.t1 AT3G18830 47.976 494 237 5 47 524 31 520 4.15e-160 466
MS.gene98665.t1 AT2G16120 47.166 494 240 4 45 517 16 509 5.22e-156 455
MS.gene98665.t1 AT2G16130 47.154 492 237 4 45 513 16 507 5.52e-155 452
MS.gene98665.t1 AT4G36670 46.526 475 239 4 46 505 8 482 8.65e-150 438
MS.gene98665.t1 AT2G18480 47.170 477 238 4 40 502 7 483 6.05e-148 434
MS.gene98665.t1 AT2G43330 32.207 503 317 9 37 526 16 507 9.41e-70 232
MS.gene98665.t1 AT5G17010 29.783 507 306 11 21 499 15 499 6.00e-69 230
MS.gene98665.t1 AT5G17010 29.783 507 306 11 21 499 15 499 6.00e-69 230
MS.gene98665.t1 AT5G17010 29.783 507 306 11 21 499 15 499 6.00e-69 230
MS.gene98665.t1 AT5G16150 33.402 485 297 11 23 500 75 540 6.90e-66 223
MS.gene98665.t1 AT5G16150 33.402 485 297 11 23 500 75 540 6.90e-66 223
MS.gene98665.t1 AT5G16150 33.402 485 297 11 23 500 75 540 6.90e-66 223
MS.gene98665.t1 AT1G75220 30.584 497 309 10 17 503 17 487 3.78e-64 217
MS.gene98665.t1 AT3G05150 30.943 488 306 10 21 501 5 468 5.71e-63 213
MS.gene98665.t1 AT3G05150 30.943 488 306 10 21 501 5 468 5.71e-63 213
MS.gene98665.t1 AT3G05150 30.943 488 306 10 21 501 5 468 7.51e-63 213
MS.gene98665.t1 AT1G19450 30.039 516 320 13 1 503 1 488 3.86e-62 212
MS.gene98665.t1 AT5G59250 30.390 487 308 10 34 499 77 553 4.68e-62 213
MS.gene98665.t1 AT1G08930 29.435 496 312 10 22 505 25 494 3.53e-61 209
MS.gene98665.t1 AT1G08930 29.435 496 312 10 22 505 25 494 3.53e-61 209
MS.gene98665.t1 AT3G03090 30.333 511 307 13 21 499 6 499 5.40e-61 209
MS.gene98665.t1 AT3G05165 28.392 479 313 8 31 499 2 460 3.58e-59 203
MS.gene98665.t1 AT3G05165 28.392 479 313 8 31 499 2 460 3.58e-59 203
MS.gene98665.t1 AT3G05165 28.392 479 313 8 31 499 2 460 3.58e-59 203
MS.gene98665.t1 AT5G18840 31.579 494 300 12 22 505 16 481 2.73e-58 201
MS.gene98665.t1 AT2G48020 30.737 475 295 9 31 499 12 458 2.96e-58 201
MS.gene98665.t1 AT2G48020 30.737 475 295 9 31 499 12 458 2.96e-58 201
MS.gene98665.t1 AT3G05160 28.511 470 300 9 40 499 8 451 9.79e-58 199
MS.gene98665.t1 AT5G27350 29.661 472 294 12 43 500 15 462 1.74e-57 199
MS.gene98665.t1 AT5G27360 28.986 483 315 11 27 499 1 465 5.48e-57 197
MS.gene98665.t1 AT5G27360 28.986 483 315 11 27 499 49 513 3.59e-56 197
MS.gene98665.t1 AT1G54730 30.260 423 269 9 83 499 60 462 1.59e-55 194
MS.gene98665.t1 AT3G05155 29.936 471 281 11 45 499 18 455 5.36e-55 192
MS.gene98665.t1 AT4G04760 30.361 471 284 12 51 505 28 470 1.86e-54 191
MS.gene98665.t1 AT4G04760 30.787 432 266 9 85 505 2 411 5.08e-54 188
MS.gene98665.t1 AT3G05160 28.979 421 273 7 85 499 2 402 1.11e-53 187
MS.gene98665.t1 AT3G05160 28.979 421 273 7 85 499 2 402 1.11e-53 187
MS.gene98665.t1 AT5G26250 29.317 498 315 12 54 526 21 506 2.33e-53 189
MS.gene98665.t1 AT4G04750 28.405 514 322 14 14 505 29 518 2.25e-52 186
MS.gene98665.t1 AT4G04750 28.814 472 301 12 45 505 27 474 6.76e-52 184
MS.gene98665.t1 AT4G04750 28.814 472 301 12 45 505 27 474 6.76e-52 184
MS.gene98665.t1 AT1G08900 30.166 421 272 8 83 499 11 413 6.32e-51 180
MS.gene98665.t1 AT3G19940 27.083 480 311 11 54 505 24 492 9.14e-51 182
MS.gene98665.t1 AT1G08900 30.166 421 272 8 83 499 45 447 9.15e-51 180
MS.gene98665.t1 AT1G08900 28.392 479 312 10 25 499 4 455 1.20e-50 180
MS.gene98665.t1 AT1G08900 28.392 479 312 10 25 499 4 455 1.20e-50 180
MS.gene98665.t1 AT1G50310 26.931 479 314 11 54 505 24 493 1.78e-50 181
MS.gene98665.t1 AT1G08890 29.677 465 295 11 45 499 15 457 3.55e-50 179
MS.gene98665.t1 AT4G04760 29.122 467 292 12 51 505 28 467 5.72e-50 179
MS.gene98665.t1 AT1G77210 27.011 522 320 20 35 520 8 504 3.42e-49 177
MS.gene98665.t1 AT1G77210 27.011 522 320 20 35 520 8 504 3.42e-49 177
MS.gene98665.t1 AT3G05960 27.163 497 328 10 54 526 20 506 3.51e-49 177
MS.gene98665.t1 AT5G26340 26.800 500 325 10 55 525 24 511 6.54e-49 177
MS.gene98665.t1 AT1G08920 28.936 470 294 12 45 499 18 462 3.34e-48 174
MS.gene98665.t1 AT3G05400 28.390 472 299 12 45 504 17 461 5.65e-48 173
MS.gene98665.t1 AT1G05030 29.932 441 296 7 62 500 86 515 1.26e-47 173
MS.gene98665.t1 AT1G30220 33.131 329 212 5 54 378 27 351 2.51e-47 174
MS.gene98665.t1 AT1G30220 45.833 96 52 0 410 505 464 559 1.48e-18 89.4
MS.gene98665.t1 AT2G35740 32.059 340 212 7 54 382 25 356 9.31e-47 172
MS.gene98665.t1 AT2G35740 39.806 103 62 0 401 503 458 560 1.69e-17 86.3
MS.gene98665.t1 AT3G05165 27.294 436 288 7 31 456 2 418 1.39e-46 170
MS.gene98665.t1 AT4G02050 25.203 492 328 9 41 505 13 491 2.20e-46 170
MS.gene98665.t1 AT4G02050 25.203 492 328 9 41 505 13 491 2.20e-46 170
MS.gene98665.t1 AT1G67300 29.528 508 313 16 15 500 3 487 2.45e-46 169
MS.gene98665.t1 AT1G67300 29.528 508 313 16 15 500 3 487 2.45e-46 169
MS.gene98665.t1 AT1G08920 28.903 474 294 13 45 499 20 469 3.96e-46 168
MS.gene98665.t1 AT4G16480 31.429 350 217 6 54 390 26 365 4.32e-46 170
MS.gene98665.t1 AT4G16480 36.066 122 70 1 401 514 459 580 2.34e-17 85.9
MS.gene98665.t1 AT4G16480 31.429 350 217 6 54 390 26 365 4.32e-46 170
MS.gene98665.t1 AT4G16480 36.066 122 70 1 401 514 459 580 2.34e-17 85.9
MS.gene98665.t1 AT4G16480 31.429 350 217 6 54 390 26 365 4.32e-46 170
MS.gene98665.t1 AT4G16480 36.066 122 70 1 401 514 459 580 2.34e-17 85.9
MS.gene98665.t1 AT3G05165 27.529 425 279 7 31 445 2 407 4.36e-46 168
MS.gene98665.t1 AT3G05165 27.529 425 279 7 31 445 2 407 4.36e-46 168
MS.gene98665.t1 AT1G54730 27.660 423 259 8 83 499 60 441 6.47e-46 167
MS.gene98665.t1 AT1G67300 29.470 509 313 16 15 500 3 488 1.32e-45 167
MS.gene98665.t1 AT5G27360 30.811 370 234 9 134 499 10 361 3.26e-45 163
MS.gene98665.t1 AT5G27360 30.811 370 234 9 134 499 10 361 3.26e-45 163
MS.gene98665.t1 AT1G54730 29.211 380 244 8 83 456 60 420 1.07e-44 163
MS.gene98665.t1 AT3G19930 26.477 491 316 12 51 511 20 495 1.53e-44 165
MS.gene98665.t1 AT3G19930 26.477 491 316 12 51 511 20 495 1.53e-44 165
MS.gene98665.t1 AT1G11260 25.000 500 330 12 54 517 22 512 2.99e-44 164
MS.gene98665.t1 AT5G17010 27.033 492 247 11 40 499 25 436 4.01e-44 162
MS.gene98665.t1 AT1G34580 26.775 493 312 13 51 509 21 498 4.48e-44 163
MS.gene98665.t1 AT5G23270 25.251 499 325 11 46 511 15 498 1.66e-43 162
MS.gene98665.t1 AT1G05030 28.274 481 319 10 22 500 7 463 8.46e-43 159
MS.gene98665.t1 AT1G07340 27.176 471 304 10 55 498 23 481 1.46e-42 159
MS.gene98665.t1 AT1G34580 27.423 423 280 9 101 509 39 448 1.74e-42 158
MS.gene98665.t1 AT3G05400 27.331 472 284 13 45 504 17 441 3.44e-42 157
MS.gene98665.t1 AT4G21480 26.446 484 309 13 54 505 22 490 1.70e-41 156
MS.gene98665.t1 AT1G67300 29.464 448 271 16 15 440 3 427 2.81e-41 154
MS.gene98665.t1 AT1G67300 29.464 448 271 16 15 440 3 427 2.81e-41 154
MS.gene98665.t1 AT1G67300 29.241 448 272 15 15 440 3 427 4.26e-41 154
MS.gene98665.t1 AT1G67300 29.241 448 272 15 15 440 3 427 4.26e-41 154
MS.gene98665.t1 AT1G79820 29.487 468 295 13 45 500 44 488 1.47e-40 153
MS.gene98665.t1 AT1G79820 29.487 468 295 13 45 500 44 488 1.47e-40 153
MS.gene98665.t1 AT3G20460 27.064 436 292 10 70 499 68 483 2.13e-40 152
MS.gene98665.t1 AT5G27360 27.014 422 281 10 27 438 1 405 7.06e-40 150
MS.gene98665.t1 AT1G54730 28.977 352 225 8 83 428 60 392 5.52e-39 147
MS.gene98665.t1 AT1G54730 28.977 352 225 8 83 428 60 392 5.52e-39 147
MS.gene98665.t1 AT1G08920 27.294 425 274 10 45 456 18 420 1.38e-37 144
MS.gene98665.t1 AT1G08900 26.376 436 291 9 25 456 4 413 2.37e-37 143
MS.gene98665.t1 AT1G50310 27.378 347 236 9 166 505 13 350 3.67e-37 141
MS.gene98665.t1 AT1G79820 29.056 413 264 11 45 448 44 436 1.77e-35 138
MS.gene98665.t1 AT1G54730 26.316 380 234 7 83 456 60 399 2.09e-35 137
MS.gene98665.t1 AT5G61520 25.466 483 318 10 54 505 23 494 5.07e-35 138
MS.gene98665.t1 AT2G48020 27.731 357 230 6 54 404 33 367 6.35e-35 135
MS.gene98665.t1 AT2G48020 27.660 329 216 4 54 382 33 339 4.29e-34 132
MS.gene98665.t1 AT3G05155 28.657 335 205 7 45 372 18 325 5.50e-34 131
MS.gene98665.t1 AT1G77210 26.954 371 230 14 167 520 9 355 9.31e-34 131
MS.gene98665.t1 AT3G51490 36.441 236 145 5 53 285 2 235 1.14e-33 136
MS.gene98665.t1 AT3G51490 29.437 231 138 5 284 502 495 712 7.78e-19 90.5
MS.gene98665.t1 AT3G51490 36.441 236 145 5 53 285 2 235 1.20e-33 136
MS.gene98665.t1 AT3G51490 32.468 231 139 5 284 502 495 720 1.82e-21 99.0
MS.gene98665.t1 AT1G54730 28.618 304 197 6 69 372 50 333 9.78e-33 128
MS.gene98665.t1 AT5G61520 25.854 410 289 6 101 505 47 446 3.71e-32 129
MS.gene98665.t1 AT1G20840 35.981 214 125 5 59 266 8 215 8.61e-30 124
MS.gene98665.t1 AT1G20840 32.751 229 135 5 287 502 497 719 5.82e-22 100
MS.gene98665.t1 AT1G20840 35.981 214 125 5 59 266 8 215 8.61e-30 124
MS.gene98665.t1 AT1G20840 32.751 229 135 5 287 502 497 719 5.82e-22 100
MS.gene98665.t1 AT1G54730 26.136 352 214 8 83 428 60 371 9.22e-30 121
MS.gene98665.t1 AT1G54730 27.376 263 179 3 83 345 60 310 1.19e-28 116
MS.gene98665.t1 AT1G54730 27.376 263 179 3 83 345 60 310 1.19e-28 116
MS.gene98665.t1 AT3G51490 38.506 174 104 3 113 285 14 185 8.62e-26 112
MS.gene98665.t1 AT3G51490 32.468 231 139 5 284 502 445 670 2.03e-21 98.6
MS.gene98665.t1 AT4G35300 37.811 201 117 6 66 260 15 213 1.68e-25 111
MS.gene98665.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.45e-24 108
MS.gene98665.t1 AT4G35300 37.811 201 117 6 66 260 15 213 1.68e-25 111
MS.gene98665.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.45e-24 108
MS.gene98665.t1 AT4G35300 37.811 201 117 6 66 260 15 213 1.68e-25 111
MS.gene98665.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.45e-24 108
MS.gene98665.t1 AT4G35300 37.811 201 117 6 66 260 15 213 1.68e-25 111
MS.gene98665.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.45e-24 108
MS.gene98665.t1 AT4G35300 37.811 201 117 6 66 260 15 213 1.68e-25 111
MS.gene98665.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.45e-24 108
MS.gene98665.t1 AT4G35300 37.811 201 117 6 66 260 15 213 1.68e-25 111
MS.gene98665.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.45e-24 108
MS.gene98665.t1 AT4G35300 37.811 201 117 6 66 260 15 213 1.68e-25 111
MS.gene98665.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.45e-24 108
MS.gene98665.t1 AT4G35300 37.811 201 117 6 66 260 15 213 1.83e-25 111
MS.gene98665.t1 AT4G35300 32.751 229 133 6 288 502 495 716 1.60e-24 108
MS.gene98665.t1 AT4G35300 37.811 201 117 6 66 260 15 213 1.83e-25 111
MS.gene98665.t1 AT4G35300 32.751 229 133 6 288 502 495 716 1.60e-24 108
MS.gene98665.t1 AT4G35300 37.811 201 117 6 66 260 15 213 1.83e-25 111
MS.gene98665.t1 AT4G35300 32.751 229 133 6 288 502 495 716 1.60e-24 108
MS.gene98665.t1 AT4G35300 32.751 229 133 6 288 502 308 529 6.03e-25 108
MS.gene98665.t1 AT1G79820 26.282 468 262 14 45 500 44 440 8.22e-25 107
MS.gene98665.t1 AT5G43350 22.319 457 296 14 104 509 76 524 7.89e-13 71.2
MS.gene98665.t1 AT5G43340 22.477 436 294 13 105 505 82 508 1.77e-12 70.1
MS.gene98665.t1 AT1G16370 25.282 443 264 19 91 510 116 514 4.20e-12 68.9
MS.gene98665.t1 AT2G38940 21.670 443 291 11 105 499 81 515 2.68e-11 66.6
MS.gene98665.t1 AT1G79820 37.748 151 80 5 357 500 235 378 5.30e-11 65.1

Find 121 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGCGGCCATTAAAATTTC+TGG 0.104258 4.4:-59219820 None:intergenic
ACTCTTTCATTATTTGAAAA+AGG 0.131055 4.4:+59220006 MS.gene98665:CDS
TTGGACTCGGCCCTGTTTGC+TGG 0.157878 4.4:+59220088 MS.gene98665:CDS
AACAAAGACCGTCTTTATTT+TGG 0.178346 4.4:+59219891 MS.gene98665:CDS
TGTATCTCTATTGGGTAGTT+TGG 0.222757 4.4:+59219153 MS.gene98665:CDS
AAGGCCGGAAAACGCGTAAT+TGG 0.248896 4.4:-59219443 None:intergenic
TCTCTCAACAATGTTCTTCT+TGG 0.260513 4.4:+59218799 MS.gene98665:CDS
GCTGGAATTGGAATAGGTTT+TGG 0.278916 4.4:+59219307 MS.gene98665:CDS
TTTGAGTATTGTATCTCTAT+TGG 0.289099 4.4:+59219144 MS.gene98665:CDS
CAGATATTATTGGTAGAAAA+TGG 0.294464 4.4:+59219191 MS.gene98665:CDS
TCTTATCTTCCAATTGTTGT+TGG 0.306828 4.4:-59218732 None:intergenic
AAGATGATGTTCCAAGAAAA+TGG 0.307041 4.4:+59218610 None:intergenic
GACTGCTTGTTTGTTCTGTA+TGG 0.317788 4.4:+59219978 MS.gene98665:CDS
CTTCGCCGGATGCTGATTAC+TGG 0.318031 4.4:+59219739 MS.gene98665:CDS
GTATCTCTATTGGGTAGTTT+GGG 0.319309 4.4:+59219154 MS.gene98665:CDS
CTTCTCATTACTAGCACAAT+TGG 0.327974 4.4:+59219952 MS.gene98665:CDS
GTACTTGTTCTTTGTTCCTA+AGG 0.334633 4.4:-59218662 None:intergenic
GGAAGATTGTTAGCTGGAAT+TGG 0.335016 4.4:+59219295 MS.gene98665:CDS
AATGGGGAAATGGGTTTATC+AGG 0.344962 4.4:+59218634 MS.gene98665:CDS
TTGAGTATTGTATCTCTATT+GGG 0.346213 4.4:+59219145 MS.gene98665:CDS
TTGTTAGCTGGAATTGGAAT+AGG 0.355045 4.4:+59219301 MS.gene98665:CDS
AGAAAATGGTAATGGGGAAA+TGG 0.358662 4.4:+59218624 MS.gene98665:CDS
CAACTTGTGCAGAACAAAAC+TGG 0.362425 4.4:+59220402 MS.gene98665:CDS
TCATTGTAATTCCACCCATT+TGG 0.368460 4.4:-59219240 None:intergenic
TCTAAAGATAACTGAGGTTC+AGG 0.370786 4.4:+59219102 MS.gene98665:CDS
GTCCTCGTATTTACCAGAAT+TGG 0.372355 4.4:-59219677 None:intergenic
TACTTTATCAATAAGAATAA+TGG 0.372573 4.4:-59219917 None:intergenic
CTCCGCCACCGGCGCTTCGC+CGG 0.383124 4.4:+59219725 MS.gene98665:CDS
GTATCCAACGCAATTTCTTT+CGG 0.383566 4.4:+59220219 MS.gene98665:CDS
TGAGAATGAACATGGGAGTC+AGG 0.384972 4.4:+59220350 MS.gene98665:CDS
TGTTCCAAGAAAATGGTAAT+GGG 0.389476 4.4:+59218617 MS.gene98665:CDS
GGGCCATTAGTGATTGCATT+AGG 0.390751 4.4:+59220027 MS.gene98665:CDS
CACTCGGAGCTGTAGCGAAT+AGG 0.400992 4.4:+59220160 MS.gene98665:CDS
TGGACTCGGCCCTGTTTGCT+GGG 0.402706 4.4:+59220089 MS.gene98665:CDS
GATGTCAAAACCCAGCAAAC+AGG 0.402833 4.4:-59220099 None:intergenic
ATCATTAGTACTTGATATGA+AGG 0.422297 4.4:-59219271 None:intergenic
GAAAATGGTAATGGGGAAAT+GGG 0.424079 4.4:+59218625 MS.gene98665:CDS
ATACCTAATGCAATCACTAA+TGG 0.428309 4.4:-59220030 None:intergenic
GATATCTCAGCAATATATAT+AGG 0.430921 4.4:-59219343 None:intergenic
GGAAGAACATCAGATATTAT+TGG 0.433859 4.4:+59219181 MS.gene98665:CDS
TACTTGTTCTTTGTTCCTAA+GGG 0.434909 4.4:-59218661 None:intergenic
AACAATGTTCTTCTTGGCTA+TGG 0.435667 4.4:+59218805 MS.gene98665:CDS
CCGATCTTGCCTCGTCAATT+CGG 0.438325 4.4:-59219579 None:intergenic
ACTGCTTGTTTGTTCTGTAT+GGG 0.446903 4.4:+59219979 MS.gene98665:CDS
ACACTAGTACCTGAAACAAA+AGG 0.446951 4.4:+59220297 MS.gene98665:CDS
GGCTGCAGTTGTATTCCAAA+TGG 0.451381 4.4:+59219225 MS.gene98665:CDS
CGGATGCTGATTACTGGTCT+TGG 0.455359 4.4:+59219745 MS.gene98665:CDS
GCCTGAGCACGCACTCGTAA+AGG 0.455930 4.4:-59220132 None:intergenic
GCCTTTCGGTACACATAAGT+TGG 0.456022 4.4:+59219461 MS.gene98665:CDS
AACAACAATTGGAAGATAAG+AGG 0.456265 4.4:+59218734 MS.gene98665:CDS
AGTGAGCCTCTAGTGAGATT+TGG 0.456475 4.4:-59219367 None:intergenic
ACTCGGAGCTGTAGCGAATA+GGG 0.461405 4.4:+59220161 MS.gene98665:CDS
CCCTTTACGAGTGCGTGCTC+AGG 0.461504 4.4:+59220131 MS.gene98665:CDS
TTCTCATTACTAGCACAATT+GGG 0.462959 4.4:+59219953 MS.gene98665:CDS
CGTGCTCAGGCATCTGCACT+CGG 0.465823 4.4:+59220144 MS.gene98665:CDS
TCATATCAAGTACTAATGAT+TGG 0.466636 4.4:+59219274 MS.gene98665:CDS
ATGTTCCAAGAAAATGGTAA+TGG 0.470800 4.4:+59218616 MS.gene98665:CDS
AAGATAAGAGGAACAGTACT+AGG 0.471084 4.4:+59218746 MS.gene98665:CDS
CCGAATTGACGAGGCAAGAT+CGG 0.474726 4.4:+59219579 MS.gene98665:CDS
ATTATTCTTATTGATAAAGT+AGG 0.477981 4.4:+59219919 MS.gene98665:CDS
ATCCGGCGAAGCGCCGGTGG+CGG 0.482961 4.4:-59219727 None:intergenic
CCTGAGCACGCACTCGTAAA+GGG 0.483401 4.4:-59220131 None:intergenic
GGTTTATCAGGAATTCCCTT+AGG 0.485952 4.4:+59218646 MS.gene98665:CDS
CTATTGGGTAGTTTGGGTGG+TGG 0.488972 4.4:+59219160 MS.gene98665:CDS
GAGGCTAGCAGAAATACAAC+AGG 0.497842 4.4:+59219642 MS.gene98665:CDS
ATCAGCATCCGGCGAAGCGC+CGG 0.504116 4.4:-59219733 None:intergenic
CACTAGTACCTGAAACAAAA+GGG 0.508537 4.4:+59220298 MS.gene98665:CDS
ATAAATGTAGTAATTATGCT+TGG 0.509540 4.4:+59219412 MS.gene98665:CDS
ATGAGAAAGAAGTGGAAGAG+AGG 0.523249 4.4:+59219623 MS.gene98665:CDS
CAAGACCAGTAATCAGCATC+CGG 0.526849 4.4:-59219744 None:intergenic
ATGATTGGAAGATTGTTAGC+TGG 0.528824 4.4:+59219289 MS.gene98665:CDS
ACTTATGTGTACCGAAAGGC+CGG 0.528846 4.4:-59219458 None:intergenic
TGAATTGCTCTCTCCGCCAC+CGG 0.529504 4.4:+59219714 MS.gene98665:CDS
CCAACGCAATTTCTTTCGGC+GGG 0.535097 4.4:+59220223 MS.gene98665:CDS
GACGGTCTTTGTTATACCTA+CGG 0.535206 4.4:-59219881 None:intergenic
CAGGGAAAAGAGATGGAGCT+AGG 0.539460 4.4:+59220369 MS.gene98665:CDS
GCTGCAGTTGTATTCCAAAT+GGG 0.552850 4.4:+59219226 MS.gene98665:CDS
AGCATCCGGCGAAGCGCCGG+TGG 0.553482 4.4:-59219730 None:intergenic
ACCAACCATCTCGGCGACTC+AGG 0.557547 4.4:-59219547 None:intergenic
TCTCTATTGGGTAGTTTGGG+TGG 0.559075 4.4:+59219157 MS.gene98665:CDS
GCAGAAATACAACAGGCTGC+TGG 0.560147 4.4:+59219649 MS.gene98665:CDS
AAACGAAGATGAGAAAGAAG+TGG 0.563366 4.4:+59219615 MS.gene98665:CDS
CAATTGTGCTAGTAATGAGA+AGG 0.568147 4.4:-59219951 None:intergenic
TCATTAGTACTTGATATGAA+GGG 0.569168 4.4:-59219270 None:intergenic
TCCTGAGTCGCCGAGATGGT+TGG 0.572336 4.4:+59219546 MS.gene98665:CDS
TGGGAGTCAGGGAAAAGAGA+TGG 0.575169 4.4:+59220362 MS.gene98665:CDS
GAGAATGAACATGGGAGTCA+GGG 0.577348 4.4:+59220351 MS.gene98665:CDS
TGGAGAGTAATGCTTGCTGT+TGG 0.577364 4.4:+59219481 MS.gene98665:CDS
GAACAAAGAACAAGTACAAG+AGG 0.581349 4.4:+59218668 MS.gene98665:CDS
AGAGAGCAATTCACGCCACA+CGG 0.586023 4.4:-59219704 None:intergenic
ATGTCAAAACCCAGCAAACA+GGG 0.587235 4.4:-59220098 None:intergenic
TTCTGCATTACCAACCATCT+CGG 0.587579 4.4:-59219556 None:intergenic
AAATTGCGTTGGATACAGAC+AGG 0.590532 4.4:-59220212 None:intergenic
TAGAAAATGGACAATGGCAT+TGG 0.591364 4.4:+59219204 MS.gene98665:CDS
ACAGGAAAGACATGGCTACA+AGG 0.594862 4.4:-59220194 None:intergenic
AATTGTGCTAGTAATGAGAA+GGG 0.597166 4.4:-59219950 None:intergenic
GCAGATGTGGGTGTGATGAG+TGG 0.598876 4.4:+59219055 MS.gene98665:intron
TTATTCCTGAGTCGCCGAGA+TGG 0.599472 4.4:+59219542 MS.gene98665:CDS
CCCGCCGAAAGAAATTGCGT+TGG 0.604005 4.4:-59220223 None:intergenic
ATGATGTTTGAGAATGAACA+TGG 0.614564 4.4:+59220342 MS.gene98665:CDS
TCCAACGCAATTTCTTTCGG+CGG 0.616866 4.4:+59220222 MS.gene98665:CDS
CATTAGTACTTGATATGAAG+GGG 0.622524 4.4:-59219269 None:intergenic
GCAAAACCAATGAACACTGA+AGG 0.623428 4.4:-59219511 None:intergenic
TGATTTATCTTCAATTCCAG+CGG 0.623893 4.4:-59219836 None:intergenic
GTTCCAAGAAAATGGTAATG+GGG 0.628643 4.4:+59218618 MS.gene98665:CDS
AATGGCCACCAAAATAAAGA+CGG 0.634627 4.4:-59219899 None:intergenic
GCAGTTGTATTCCAAATGGG+TGG 0.636411 4.4:+59219229 MS.gene98665:CDS
TGCCAATTCTGGTAAATACG+AGG 0.640126 4.4:+59219675 MS.gene98665:CDS
ATATCACCAAATCTCACTAG+AGG 0.642480 4.4:+59219361 MS.gene98665:CDS
CTAGCTGCTACTGTTGCCGT+AGG 0.648188 4.4:+59219865 MS.gene98665:CDS
TATTGGTAGAAAATGGACAA+TGG 0.649056 4.4:+59219198 MS.gene98665:CDS
GAGAGCAATTCACGCCACAC+GGG 0.655886 4.4:-59219703 None:intergenic
TAGTGTGAAAACAAAGACAA+TGG 0.657278 4.4:-59220280 None:intergenic
ATTGTGCTAGTAATGAGAAG+GGG 0.672038 4.4:-59219949 None:intergenic
TCCAACTTATGTGTACCGAA+AGG 0.681195 4.4:-59219462 None:intergenic
GTAGCGAATAGGGTTTGCAG+CGG 0.685373 4.4:+59220171 MS.gene98665:CDS
AGAAGATCTAAAGATAACTG+AGG 0.686492 4.4:+59219096 MS.gene98665:CDS
GGATACAGACAGGAAAGACA+TGG 0.687845 4.4:-59220202 None:intergenic
TGATGTTTGAGAATGAACAT+GGG 0.695121 4.4:+59220343 MS.gene98665:CDS
AATGCAGAACCGAATTGACG+AGG 0.707414 4.4:+59219570 MS.gene98665:CDS
AATACGAGGACAAACCCGTG+TGG 0.757333 4.4:+59219689 MS.gene98665:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTCTTATTGATAAAGT+AGG + chr4.4:59219919-59219938 MS.gene98665:CDS 15.0%
!! TACTTTATCAATAAGAATAA+TGG - chr4.4:59219920-59219939 None:intergenic 15.0%
!!! TTTTATTGAGATGATTTTTA+CGG + chr4.4:59219010-59219029 MS.gene98665:intron 15.0%
!! ACTACATTTATAAAAATCTC+TGG - chr4.4:59219403-59219422 None:intergenic 20.0%
!! ACTCTTTCATTATTTGAAAA+AGG + chr4.4:59220006-59220025 MS.gene98665:CDS 20.0%
!! ATAAATGTAGTAATTATGCT+TGG + chr4.4:59219412-59219431 MS.gene98665:CDS 20.0%
!! CTCTTTCATTATTTGAAAAA+GGG + chr4.4:59220007-59220026 MS.gene98665:CDS 20.0%
!!! GTGTATGTGTTATTAATTAT+GGG + chr4.4:59218985-59219004 MS.gene98665:intron 20.0%
!!! TGTGTATGTGTTATTAATTA+TGG + chr4.4:59218984-59219003 MS.gene98665:intron 20.0%
!!! TTTATTGAGATGATTTTTAC+GGG + chr4.4:59219011-59219030 MS.gene98665:intron 20.0%
! ATCATTAGTACTTGATATGA+AGG - chr4.4:59219274-59219293 None:intergenic 25.0%
! CAGATATTATTGGTAGAAAA+TGG + chr4.4:59219191-59219210 MS.gene98665:CDS 25.0%
! GATATCTCAGCAATATATAT+AGG - chr4.4:59219346-59219365 None:intergenic 25.0%
! TCATATCAAGTACTAATGAT+TGG + chr4.4:59219274-59219293 MS.gene98665:CDS 25.0%
! TCATTAGTACTTGATATGAA+GGG - chr4.4:59219273-59219292 None:intergenic 25.0%
!! TTACAGTCCAGAAATTTTAA+TGG + chr4.4:59219813-59219832 MS.gene98665:CDS 25.0%
!! TTGAGTATTGTATCTCTATT+GGG + chr4.4:59219145-59219164 MS.gene98665:CDS 25.0%
!! TTTGAGTATTGTATCTCTAT+TGG + chr4.4:59219144-59219163 MS.gene98665:CDS 25.0%
!!! TGGAAATGTAGCATTTTTTT+CGG + chr4.4:59220065-59220084 MS.gene98665:CDS 25.0%
AACAACAATTGGAAGATAAG+AGG + chr4.4:59218734-59218753 MS.gene98665:CDS 30.0%
AATTGTGCTAGTAATGAGAA+GGG - chr4.4:59219953-59219972 None:intergenic 30.0%
AGAAGATCTAAAGATAACTG+AGG + chr4.4:59219096-59219115 MS.gene98665:CDS 30.0%
ATACCTAATGCAATCACTAA+TGG - chr4.4:59220033-59220052 None:intergenic 30.0%
ATGATGTTTGAGAATGAACA+TGG + chr4.4:59220342-59220361 MS.gene98665:CDS 30.0%
ATGTTCCAAGAAAATGGTAA+TGG + chr4.4:59218616-59218635 MS.gene98665:CDS 30.0%
CATTAGTACTTGATATGAAG+GGG - chr4.4:59219272-59219291 None:intergenic 30.0%
GGAAGAACATCAGATATTAT+TGG + chr4.4:59219181-59219200 MS.gene98665:CDS 30.0%
TACTTGTTCTTTGTTCCTAA+GGG - chr4.4:59218664-59218683 None:intergenic 30.0%
TAGTGTGAAAACAAAGACAA+TGG - chr4.4:59220283-59220302 None:intergenic 30.0%
TATTGGTAGAAAATGGACAA+TGG + chr4.4:59219198-59219217 MS.gene98665:CDS 30.0%
TCTTATCTTCCAATTGTTGT+TGG - chr4.4:59218735-59218754 None:intergenic 30.0%
TGATGTTTGAGAATGAACAT+GGG + chr4.4:59220343-59220362 MS.gene98665:CDS 30.0%
TGATTTATCTTCAATTCCAG+CGG - chr4.4:59219839-59219858 None:intergenic 30.0%
TGTTCCAAGAAAATGGTAAT+GGG + chr4.4:59218617-59218636 MS.gene98665:CDS 30.0%
TTCTCATTACTAGCACAATT+GGG + chr4.4:59219953-59219972 MS.gene98665:CDS 30.0%
! TTAGGTATTCTTTTTGTCTG+TGG + chr4.4:59220045-59220064 MS.gene98665:CDS 30.0%
! TTGTGAATTTTTGCAGATGT+GGG + chr4.4:59219043-59219062 MS.gene98665:intron 30.0%
! TTTGTGAATTTTTGCAGATG+TGG + chr4.4:59219042-59219061 MS.gene98665:intron 30.0%
!! AACAAAGACCGTCTTTATTT+TGG + chr4.4:59219891-59219910 MS.gene98665:CDS 30.0%
!! GTTCAGGTAGAAATTTTGAT+TGG + chr4.4:59219118-59219137 MS.gene98665:CDS 30.0%
!!! AATGTAGCATTTTTTTCGGT+TGG + chr4.4:59220069-59220088 MS.gene98665:CDS 30.0%
AAACGAAGATGAGAAAGAAG+TGG + chr4.4:59219615-59219634 MS.gene98665:CDS 35.0%
AACAATGTTCTTCTTGGCTA+TGG + chr4.4:59218805-59218824 MS.gene98665:CDS 35.0%
AAGATAAGAGGAACAGTACT+AGG + chr4.4:59218746-59218765 MS.gene98665:CDS 35.0%
AATGGCCACCAAAATAAAGA+CGG - chr4.4:59219902-59219921 None:intergenic 35.0%
ACACTAGTACCTGAAACAAA+AGG + chr4.4:59220297-59220316 MS.gene98665:CDS 35.0%
ACTGCTTGTTTGTTCTGTAT+GGG + chr4.4:59219979-59219998 MS.gene98665:CDS 35.0%
ATATCACCAAATCTCACTAG+AGG + chr4.4:59219361-59219380 MS.gene98665:CDS 35.0%
ATGATTGGAAGATTGTTAGC+TGG + chr4.4:59219289-59219308 MS.gene98665:CDS 35.0%
ATTGTGCTAGTAATGAGAAG+GGG - chr4.4:59219952-59219971 None:intergenic 35.0%
CAATTGTGCTAGTAATGAGA+AGG - chr4.4:59219954-59219973 None:intergenic 35.0%
CACTAGTACCTGAAACAAAA+GGG + chr4.4:59220298-59220317 MS.gene98665:CDS 35.0%
CTTCTCATTACTAGCACAAT+TGG + chr4.4:59219952-59219971 MS.gene98665:CDS 35.0%
GAACAAAGAACAAGTACAAG+AGG + chr4.4:59218668-59218687 MS.gene98665:CDS 35.0%
GTACTTGTTCTTTGTTCCTA+AGG - chr4.4:59218665-59218684 None:intergenic 35.0%
GTATCCAACGCAATTTCTTT+CGG + chr4.4:59220219-59220238 MS.gene98665:CDS 35.0%
GTATCTCTATTGGGTAGTTT+GGG + chr4.4:59219154-59219173 MS.gene98665:CDS 35.0%
TAGAAAATGGACAATGGCAT+TGG + chr4.4:59219204-59219223 MS.gene98665:CDS 35.0%
TCATTGTAATTCCACCCATT+TGG - chr4.4:59219243-59219262 None:intergenic 35.0%
TCTAAAGATAACTGAGGTTC+AGG + chr4.4:59219102-59219121 MS.gene98665:CDS 35.0%
TCTCTCAACAATGTTCTTCT+TGG + chr4.4:59218799-59218818 MS.gene98665:CDS 35.0%
TGTATCTCTATTGGGTAGTT+TGG + chr4.4:59219153-59219172 MS.gene98665:CDS 35.0%
TTGTTAGCTGGAATTGGAAT+AGG + chr4.4:59219301-59219320 MS.gene98665:CDS 35.0%
! ATTTTGCCTTCAGTGTTCAT+TGG + chr4.4:59219505-59219524 MS.gene98665:CDS 35.0%
! CAGTGTTTTCAACAAATCTC+TGG + chr4.4:59219772-59219791 MS.gene98665:CDS 35.0%
! GTTCCAAGAAAATGGTAATG+GGG + chr4.4:59218618-59218637 MS.gene98665:CDS 35.0%
! TGTTTTGCACCAACAACAAT+TGG + chr4.4:59218723-59218742 MS.gene98665:CDS 35.0%
! TTTCCCCATTACCATTTTCT+TGG - chr4.4:59218624-59218643 None:intergenic 35.0%
!! AATGACTTCCCTTTTGTTTC+AGG - chr4.4:59220309-59220328 None:intergenic 35.0%
!! AGAAAATGGTAATGGGGAAA+TGG + chr4.4:59218624-59218643 MS.gene98665:CDS 35.0%
!! GAAAATGGTAATGGGGAAAT+GGG + chr4.4:59218625-59218644 MS.gene98665:CDS 35.0%
!!! AAAGACCGTCTTTATTTTGG+TGG + chr4.4:59219894-59219913 MS.gene98665:CDS 35.0%
AAATTGCGTTGGATACAGAC+AGG - chr4.4:59220215-59220234 None:intergenic 40.0%
ATGAGAAAGAAGTGGAAGAG+AGG + chr4.4:59219623-59219642 MS.gene98665:CDS 40.0%
ATGTCAAAACCCAGCAAACA+GGG - chr4.4:59220101-59220120 None:intergenic 40.0%
CAACTTGTGCAGAACAAAAC+TGG + chr4.4:59220402-59220421 MS.gene98665:CDS 40.0%
GACTGCTTGTTTGTTCTGTA+TGG + chr4.4:59219978-59219997 MS.gene98665:CDS 40.0%
GCAAAACCAATGAACACTGA+AGG - chr4.4:59219514-59219533 None:intergenic 40.0%
GCTGCAGTTGTATTCCAAAT+GGG + chr4.4:59219226-59219245 MS.gene98665:CDS 40.0%
GGAAGATTGTTAGCTGGAAT+TGG + chr4.4:59219295-59219314 MS.gene98665:CDS 40.0%
GGTTTATCAGGAATTCCCTT+AGG + chr4.4:59218646-59218665 MS.gene98665:CDS 40.0%
GTCCTCGTATTTACCAGAAT+TGG - chr4.4:59219680-59219699 None:intergenic 40.0%
TCCAACTTATGTGTACCGAA+AGG - chr4.4:59219465-59219484 None:intergenic 40.0%
TGCCAATTCTGGTAAATACG+AGG + chr4.4:59219675-59219694 MS.gene98665:CDS 40.0%
TTCTGCATTACCAACCATCT+CGG - chr4.4:59219559-59219578 None:intergenic 40.0%
! AATGGGGAAATGGGTTTATC+AGG + chr4.4:59218634-59218653 MS.gene98665:CDS 40.0%
! GACGGTCTTTGTTATACCTA+CGG - chr4.4:59219884-59219903 None:intergenic 40.0%
! GCTGGAATTGGAATAGGTTT+TGG + chr4.4:59219307-59219326 MS.gene98665:CDS 40.0%
! GTATCCAATTACGCGTTTTC+CGG + chr4.4:59219439-59219458 MS.gene98665:CDS 40.0%
!!! GCATTTTTTTCGGTTGGACT+CGG + chr4.4:59220075-59220094 MS.gene98665:CDS 40.0%
AATGCAGAACCGAATTGACG+AGG + chr4.4:59219570-59219589 MS.gene98665:CDS 45.0%
ACAGGAAAGACATGGCTACA+AGG - chr4.4:59220197-59220216 None:intergenic 45.0%
ACTTATGTGTACCGAAAGGC+CGG - chr4.4:59219461-59219480 None:intergenic 45.0%
AGTGAGCCTCTAGTGAGATT+TGG - chr4.4:59219370-59219389 None:intergenic 45.0%
CAAGACCAGTAATCAGCATC+CGG - chr4.4:59219747-59219766 None:intergenic 45.0%
CCAGCGGCCATTAAAATTTC+TGG - chr4.4:59219823-59219842 None:intergenic 45.0%
GAGAATGAACATGGGAGTCA+GGG + chr4.4:59220351-59220370 MS.gene98665:CDS 45.0%
GAGGCTAGCAGAAATACAAC+AGG + chr4.4:59219642-59219661 MS.gene98665:CDS 45.0%
GATGTCAAAACCCAGCAAAC+AGG - chr4.4:59220102-59220121 None:intergenic 45.0%
GCAGTTGTATTCCAAATGGG+TGG + chr4.4:59219229-59219248 MS.gene98665:CDS 45.0%
GCCTTTCGGTACACATAAGT+TGG + chr4.4:59219461-59219480 MS.gene98665:CDS 45.0%
GGATACAGACAGGAAAGACA+TGG - chr4.4:59220205-59220224 None:intergenic 45.0%
GGCTGCAGTTGTATTCCAAA+TGG + chr4.4:59219225-59219244 MS.gene98665:CDS 45.0%
GGGCCATTAGTGATTGCATT+AGG + chr4.4:59220027-59220046 MS.gene98665:CDS 45.0%
TCCAACGCAATTTCTTTCGG+CGG + chr4.4:59220222-59220241 MS.gene98665:CDS 45.0%
TCTCTATTGGGTAGTTTGGG+TGG + chr4.4:59219157-59219176 MS.gene98665:CDS 45.0%
TGAGAATGAACATGGGAGTC+AGG + chr4.4:59220350-59220369 MS.gene98665:CDS 45.0%
!! CCAGAAATTTTAATGGCCGC+TGG + chr4.4:59219820-59219839 MS.gene98665:CDS 45.0%
!! TGGAGAGTAATGCTTGCTGT+TGG + chr4.4:59219481-59219500 MS.gene98665:CDS 45.0%
AAGGCCGGAAAACGCGTAAT+TGG - chr4.4:59219446-59219465 None:intergenic 50.0%
AATACGAGGACAAACCCGTG+TGG + chr4.4:59219689-59219708 MS.gene98665:CDS 50.0%
ACTCGGAGCTGTAGCGAATA+GGG + chr4.4:59220161-59220180 MS.gene98665:CDS 50.0%
AGAGAGCAATTCACGCCACA+CGG - chr4.4:59219707-59219726 None:intergenic 50.0%
CAGGGAAAAGAGATGGAGCT+AGG + chr4.4:59220369-59220388 MS.gene98665:CDS 50.0%
CCAACGCAATTTCTTTCGGC+GGG + chr4.4:59220223-59220242 MS.gene98665:CDS 50.0%
CCGAATTGACGAGGCAAGAT+CGG + chr4.4:59219579-59219598 MS.gene98665:CDS 50.0%
CCGATCTTGCCTCGTCAATT+CGG - chr4.4:59219582-59219601 None:intergenic 50.0%
CTATTGGGTAGTTTGGGTGG+TGG + chr4.4:59219160-59219179 MS.gene98665:CDS 50.0%
GCAGAAATACAACAGGCTGC+TGG + chr4.4:59219649-59219668 MS.gene98665:CDS 50.0%
GTAGCGAATAGGGTTTGCAG+CGG + chr4.4:59220171-59220190 MS.gene98665:CDS 50.0%
TGGGAGTCAGGGAAAAGAGA+TGG + chr4.4:59220362-59220381 MS.gene98665:CDS 50.0%
TTATTCCTGAGTCGCCGAGA+TGG + chr4.4:59219542-59219561 MS.gene98665:CDS 50.0%
! CGGATGCTGATTACTGGTCT+TGG + chr4.4:59219745-59219764 MS.gene98665:CDS 50.0%
! TTACGCGTTTTCCGGCCTTT+CGG + chr4.4:59219447-59219466 MS.gene98665:CDS 50.0%
!!! GCTGCTGGTTTTGCCAATTC+TGG + chr4.4:59219664-59219683 MS.gene98665:CDS 50.0%
CACTCGGAGCTGTAGCGAAT+AGG + chr4.4:59220160-59220179 MS.gene98665:CDS 55.0%
CCCGCCGAAAGAAATTGCGT+TGG - chr4.4:59220226-59220245 None:intergenic 55.0%
CCTGAGCACGCACTCGTAAA+GGG - chr4.4:59220134-59220153 None:intergenic 55.0%
CTAGCTGCTACTGTTGCCGT+AGG + chr4.4:59219865-59219884 MS.gene98665:CDS 55.0%
GAGAGCAATTCACGCCACAC+GGG - chr4.4:59219706-59219725 None:intergenic 55.0%
GCAGATGTGGGTGTGATGAG+TGG + chr4.4:59219055-59219074 MS.gene98665:intron 55.0%
TGAATTGCTCTCTCCGCCAC+CGG + chr4.4:59219714-59219733 MS.gene98665:CDS 55.0%
! CTTCGCCGGATGCTGATTAC+TGG + chr4.4:59219739-59219758 MS.gene98665:CDS 55.0%
ACCAACCATCTCGGCGACTC+AGG - chr4.4:59219550-59219569 None:intergenic 60.0%
CCCTTTACGAGTGCGTGCTC+AGG + chr4.4:59220131-59220150 MS.gene98665:CDS 60.0%
CGTGCTCAGGCATCTGCACT+CGG + chr4.4:59220144-59220163 MS.gene98665:CDS 60.0%
GCCTGAGCACGCACTCGTAA+AGG - chr4.4:59220135-59220154 None:intergenic 60.0%
TCCTGAGTCGCCGAGATGGT+TGG + chr4.4:59219546-59219565 MS.gene98665:CDS 60.0%
TGGACTCGGCCCTGTTTGCT+GGG + chr4.4:59220089-59220108 MS.gene98665:CDS 60.0%
TTGGACTCGGCCCTGTTTGC+TGG + chr4.4:59220088-59220107 MS.gene98665:CDS 60.0%
ATCAGCATCCGGCGAAGCGC+CGG - chr4.4:59219736-59219755 None:intergenic 65.0%
!! AGCATCCGGCGAAGCGCCGG+TGG - chr4.4:59219733-59219752 None:intergenic 75.0%
!! ATCCGGCGAAGCGCCGGTGG+CGG - chr4.4:59219730-59219749 None:intergenic 75.0%
! CTCCGCCACCGGCGCTTCGC+CGG + chr4.4:59219725-59219744 MS.gene98665:CDS 80.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 59218613 59220437 59218613 ID=MS.gene98665
chr4.4 mRNA 59218613 59220437 59218613 ID=MS.gene98665.t1;Parent=MS.gene98665
chr4.4 exon 59218613 59218826 59218613 ID=MS.gene98665.t1.exon1;Parent=MS.gene98665.t1
chr4.4 CDS 59218613 59218826 59218613 ID=cds.MS.gene98665.t1;Parent=MS.gene98665.t1
chr4.4 exon 59219059 59220437 59219059 ID=MS.gene98665.t1.exon2;Parent=MS.gene98665.t1
chr4.4 CDS 59219059 59220437 59219059 ID=cds.MS.gene98665.t1;Parent=MS.gene98665.t1
Gene Sequence

>MS.gene98665

ATGATGTTCCAAGAAAATGGTAATGGGGAAATGGGTTTATCAGGAATTCCCTTAGGAACAAAGAACAAGTACAAGAGGATGAATTCACAGCTTGTTGATGATAATGATGATGTTTTGCACCAACAACAATTGGAAGATAAGAGGAACAGTACTAGGAAATATGTTATTGCTTGTGCTATATTTGCTTCTCTCAACAATGTTCTTCTTGGCTATGGTATGCTTTCTTTGAAAAGTCTTTGACTTTGTTGATTTTTTGCGTTGACTTTGATTCTAATTAGATTGTTCTTGATGATCTACAATGATTTTGATTCATTTTTGCATTTCTAGTAGCTAAGATAATAACAGATCTAAAATAATAATTCATCATCAATTGTGTATGTGTTATTAATTATGGGAGTTTTATTGAGATGATTTTTACGGGATTTTTGTTTTGTGAATTTTTGCAGATGTGGGTGTGATGAGTGGTGCAGTTATATTTATCAAAGAAGATCTAAAGATAACTGAGGTTCAGGTAGAAATTTTGATTGGTATTTTGAGTATTGTATCTCTATTGGGTAGTTTGGGTGGTGGAAGAACATCAGATATTATTGGTAGAAAATGGACAATGGCATTGGCTGCAGTTGTATTCCAAATGGGTGGAATTACAATGACTCTTGCCCCTTCATATCAAGTACTAATGATTGGAAGATTGTTAGCTGGAATTGGAATAGGTTTTGGAGTTATGATTTCACCTATATATATTGCTGAGATATCACCAAATCTCACTAGAGGCTCACTTACTACTTTTCCAGAGATTTTTATAAATGTAGTAATTATGCTTGGTTATGTATCCAATTACGCGTTTTCCGGCCTTTCGGTACACATAAGTTGGAGAGTAATGCTTGCTGTTGGAATTTTGCCTTCAGTGTTCATTGGTTTTGCTCTTTTCATTATTCCTGAGTCGCCGAGATGGTTGGTAATGCAGAACCGAATTGACGAGGCAAGATCGGTGCTGTTGAAAACAAACGAAGATGAGAAAGAAGTGGAAGAGAGGCTAGCAGAAATACAACAGGCTGCTGGTTTTGCCAATTCTGGTAAATACGAGGACAAACCCGTGTGGCGTGAATTGCTCTCTCCGCCACCGGCGCTTCGCCGGATGCTGATTACTGGTCTTGGAATTCAGTGTTTTCAACAAATCTCTGGAATTGATGCAACTGTGTATTACAGTCCAGAAATTTTAATGGCCGCTGGAATTGAAGATAAATCAAAACTTCTAGCTGCTACTGTTGCCGTAGGTATAACAAAGACCGTCTTTATTTTGGTGGCCATTATTCTTATTGATAAAGTAGGTAGAAAACCCCTTCTCATTACTAGCACAATTGGGATGACTGCTTGTTTGTTCTGTATGGGAATTACTCTTTCATTATTTGAAAAAGGGCCATTAGTGATTGCATTAGGTATTCTTTTTGTCTGTGGAAATGTAGCATTTTTTTCGGTTGGACTCGGCCCTGTTTGCTGGGTTTTGACATCTGAAATCTTCCCTTTACGAGTGCGTGCTCAGGCATCTGCACTCGGAGCTGTAGCGAATAGGGTTTGCAGCGGCCTTGTAGCCATGTCTTTCCTGTCTGTATCCAACGCAATTTCTTTCGGCGGGACATTCTTTCTGTTTTCTGCTATTTCTGCTCTTGCCATTGTCTTTGTTTTCACACTAGTACCTGAAACAAAAGGGAAGTCATTAGAACAAATTGAGATGATGTTTGAGAATGAACATGGGAGTCAGGGAAAAGAGATGGAGCTAGGTGATGTTGAACAACTTGTGCAGAACAAAACTGGTTTAACAAATTAG

Protein sequence

>MS.gene98665.t1

MMFQENGNGEMGLSGIPLGTKNKYKRMNSQLVDDNDDVLHQQQLEDKRNSTRKYVIACAIFASLNNVLLGYDVGVMSGAVIFIKEDLKITEVQVEILIGILSIVSLLGSLGGGRTSDIIGRKWTMALAAVVFQMGGITMTLAPSYQVLMIGRLLAGIGIGFGVMISPIYIAEISPNLTRGSLTTFPEIFINVVIMLGYVSNYAFSGLSVHISWRVMLAVGILPSVFIGFALFIIPESPRWLVMQNRIDEARSVLLKTNEDEKEVEERLAEIQQAAGFANSGKYEDKPVWRELLSPPPALRRMLITGLGIQCFQQISGIDATVYYSPEILMAAGIEDKSKLLAATVAVGITKTVFILVAIILIDKVGRKPLLITSTIGMTACLFCMGITLSLFEKGPLVIALGILFVCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVANRVCSGLVAMSFLSVSNAISFGGTFFLFSAISALAIVFVFTLVPETKGKSLEQIEMMFENEHGSQGKEMELGDVEQLVQNKTGLTN