AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073258


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073258.t1 MTR_7g446340 99.245 530 4 0 1 530 1 530 0.0 1062
MS.gene073258.t1 MTR_6g007340 99.245 530 4 0 1 530 1 530 0.0 1062
MS.gene073258.t1 MTR_2g013310 65.835 521 173 1 4 524 7 522 0.0 697
MS.gene073258.t1 MTR_2g013310 68.597 449 141 0 76 524 1 449 0.0 629
MS.gene073258.t1 MTR_4g069500 48.126 507 242 6 41 527 12 517 1.29e-164 477
MS.gene073258.t1 MTR_3g116240 49.896 481 221 4 42 502 11 491 1.54e-164 477
MS.gene073258.t1 MTR_6g088450 47.447 470 242 2 30 494 33 502 1.77e-161 469
MS.gene073258.t1 MTR_4g072030 46.771 511 250 6 36 529 13 518 1.56e-160 467
MS.gene073258.t1 MTR_4g069500 48.291 468 225 5 76 527 1 467 2.12e-150 439
MS.gene073258.t1 MTR_8g103500 46.552 464 242 4 45 502 8 471 3.62e-150 439
MS.gene073258.t1 MTR_8g077890 44.400 500 262 5 38 521 2 501 1.89e-148 435
MS.gene073258.t1 MTR_5g075300 45.122 492 251 6 41 515 5 494 7.69e-145 426
MS.gene073258.t1 MTR_5g019870 38.477 486 281 4 49 517 9 493 2.19e-112 343
MS.gene073258.t1 MTR_4g069500 45.593 329 162 5 215 527 1 328 3.94e-88 275
MS.gene073258.t1 MTR_3g084110 34.468 470 288 7 54 514 27 485 4.58e-80 259
MS.gene073258.t1 MTR_1g116660 34.100 478 294 6 37 505 20 485 4.53e-77 251
MS.gene073258.t1 MTR_7g082270 34.426 488 295 10 18 499 31 499 1.89e-74 244
MS.gene073258.t1 MTR_6g018790 33.740 492 305 9 18 505 71 545 2.85e-72 240
MS.gene073258.t1 MTR_1g116650 32.359 479 288 6 37 505 63 515 2.51e-71 237
MS.gene073258.t1 MTR_7g005910 32.696 471 296 8 46 505 22 482 1.13e-70 234
MS.gene073258.t1 MTR_4g077740 29.045 513 310 12 17 499 9 497 4.11e-66 223
MS.gene073258.t1 MTR_5g020270 29.341 501 312 11 17 503 17 489 8.30e-66 221
MS.gene073258.t1 MTR_8g077310 31.055 512 310 12 1 499 1 482 4.08e-64 217
MS.gene073258.t1 MTR_7g113970 30.862 499 287 12 28 500 27 493 2.44e-63 215
MS.gene073258.t1 MTR_7g082270 34.499 429 256 10 18 440 31 440 1.85e-62 212
MS.gene073258.t1 MTR_5g020270 31.719 413 243 9 106 503 1 389 1.21e-61 207
MS.gene073258.t1 MTR_7g113960 29.167 504 314 11 21 515 2 471 1.28e-61 210
MS.gene073258.t1 MTR_5g077580 28.804 552 270 10 54 505 25 553 1.57e-61 212
MS.gene073258.t1 MTR_8g077310 33.007 409 235 9 106 499 1 385 9.86e-60 202
MS.gene073258.t1 MTR_8g077300 29.365 504 312 10 16 502 1 477 1.01e-59 205
MS.gene073258.t1 MTR_1g022315 30.342 468 280 9 55 503 49 489 3.37e-59 204
MS.gene073258.t1 MTR_7g094450 29.630 486 311 11 21 499 9 470 6.10e-58 200
MS.gene073258.t1 MTR_5g020270 28.088 502 296 13 17 503 17 468 1.81e-57 199
MS.gene073258.t1 MTR_4g118610 30.328 488 317 8 19 499 12 483 4.35e-57 198
MS.gene073258.t1 MTR_2g020710 29.857 489 315 9 19 499 12 480 3.92e-56 196
MS.gene073258.t1 MTR_1g022315 31.415 417 240 9 106 503 1 390 2.16e-55 191
MS.gene073258.t1 MTR_7g094110 29.498 478 300 11 28 499 26 472 5.37e-55 192
MS.gene073258.t1 MTR_2g020710 32.512 406 249 7 100 499 5 391 5.46e-53 185
MS.gene073258.t1 MTR_1g104750 27.254 488 316 8 55 514 23 499 6.59e-52 184
MS.gene073258.t1 MTR_2g026160 32.791 369 221 7 42 391 6 366 5.48e-51 184
MS.gene073258.t1 MTR_2g026160 41.304 92 54 0 413 504 467 558 1.89e-14 76.6
MS.gene073258.t1 MTR_2g049020 34.615 338 213 5 54 387 25 358 7.56e-51 183
MS.gene073258.t1 MTR_2g049020 43.750 96 54 0 410 505 461 556 5.01e-17 84.7
MS.gene073258.t1 MTR_1g104770 27.629 485 310 9 51 506 20 492 1.34e-50 181
MS.gene073258.t1 MTR_3g074410 26.141 482 310 12 55 505 26 492 1.89e-50 181
MS.gene073258.t1 MTR_0009s0370 28.457 499 311 12 51 517 18 502 2.55e-50 180
MS.gene073258.t1 MTR_8g102860 27.579 504 320 12 47 520 19 507 3.88e-50 180
MS.gene073258.t1 MTR_3g008160 25.996 477 318 10 55 506 24 490 4.02e-50 180
MS.gene073258.t1 MTR_5g006070 26.547 501 321 12 55 524 23 507 7.98e-50 179
MS.gene073258.t1 MTR_8g102860 30.414 411 262 9 120 520 59 455 1.10e-49 177
MS.gene073258.t1 MTR_3g080240 29.328 491 319 12 21 499 54 528 1.34e-49 179
MS.gene073258.t1 MTR_3g008160 27.251 411 285 6 101 506 40 441 6.79e-49 175
MS.gene073258.t1 MTR_5g006070 27.419 434 290 9 101 524 41 459 1.26e-48 175
MS.gene073258.t1 MTR_3g023480 27.866 506 323 11 51 526 18 511 2.66e-48 175
MS.gene073258.t1 MTR_0204s0020 26.347 501 321 11 36 505 2 485 3.98e-48 174
MS.gene073258.t1 MTR_6g087040 27.406 478 311 12 54 505 25 492 5.58e-48 174
MS.gene073258.t1 MTR_6g088375 27.406 478 311 12 54 505 25 492 5.58e-48 174
MS.gene073258.t1 MTR_0204s0020 26.157 497 324 11 36 505 2 482 8.40e-48 173
MS.gene073258.t1 MTR_5g041550 26.446 484 317 11 51 505 20 493 1.52e-47 173
MS.gene073258.t1 MTR_7g094110 28.330 473 292 10 28 499 26 452 9.95e-47 169
MS.gene073258.t1 MTR_4g064820 31.105 389 230 8 45 407 86 462 1.11e-46 170
MS.gene073258.t1 MTR_4g091370 27.397 511 319 12 45 516 14 511 1.30e-46 170
MS.gene073258.t1 MTR_1g104780 25.963 493 315 10 62 520 29 505 1.47e-46 170
MS.gene073258.t1 MTR_1g038600 27.331 472 302 11 54 505 22 472 2.64e-46 169
MS.gene073258.t1 MTR_1g038630 26.708 483 309 11 54 505 22 490 2.06e-45 167
MS.gene073258.t1 MTR_3g007910 26.078 487 309 10 38 505 6 460 2.66e-45 166
MS.gene073258.t1 MTR_4g090600 26.946 501 317 12 54 516 22 511 4.08e-45 166
MS.gene073258.t1 MTR_3g074270 27.158 475 303 11 43 498 12 462 5.67e-45 165
MS.gene073258.t1 MTR_0204s0040 25.963 493 315 11 45 505 19 493 6.83e-45 165
MS.gene073258.t1 MTR_2g048720 33.714 350 220 6 54 398 25 367 8.20e-45 166
MS.gene073258.t1 MTR_4g116770 25.963 493 315 11 45 505 215 689 5.82e-44 166
MS.gene073258.t1 MTR_8g077310 30.260 423 256 10 1 413 1 394 1.66e-43 159
MS.gene073258.t1 MTR_3g093060 26.014 419 292 8 101 511 42 450 2.14e-43 160
MS.gene073258.t1 MTR_4g116790 24.458 507 343 11 45 525 17 509 5.62e-43 160
MS.gene073258.t1 MTR_3g008170 25.306 490 329 11 45 506 11 491 6.15e-43 160
MS.gene073258.t1 MTR_3g074390 25.364 481 317 12 51 502 25 492 1.14e-42 159
MS.gene073258.t1 MTR_4g013205 29.046 482 300 13 33 500 17 470 1.30e-42 159
MS.gene073258.t1 MTR_2g020710 28.947 418 270 8 19 428 12 410 6.33e-42 155
MS.gene073258.t1 MTR_6g087910 29.400 500 303 15 24 500 12 484 7.77e-42 157
MS.gene073258.t1 MTR_5g094760 23.935 493 337 9 39 505 11 491 1.23e-41 156
MS.gene073258.t1 MTR_2g020710 29.017 417 269 8 19 427 12 409 1.25e-41 154
MS.gene073258.t1 MTR_4g118610 28.297 417 277 7 19 428 12 413 1.94e-40 152
MS.gene073258.t1 MTR_3g093010 25.470 479 307 10 62 505 29 492 3.39e-40 152
MS.gene073258.t1 MTR_2g026140 31.728 353 211 8 47 390 19 350 5.38e-40 153
MS.gene073258.t1 MTR_7g113970 27.381 420 251 9 28 421 27 418 4.06e-39 147
MS.gene073258.t1 MTR_7g091690 23.887 494 338 9 38 505 10 491 5.56e-39 149
MS.gene073258.t1 MTR_5g082540 24.797 492 328 10 42 505 13 490 2.84e-37 144
MS.gene073258.t1 MTR_2g020710 27.419 372 254 4 19 389 12 368 3.08e-37 141
MS.gene073258.t1 MTR_7g113960 26.087 391 254 8 21 404 2 364 1.34e-35 137
MS.gene073258.t1 MTR_3g116060 33.333 234 153 3 53 285 2 233 2.18e-32 132
MS.gene073258.t1 MTR_3g116060 31.600 250 155 7 265 502 472 717 9.01e-22 99.8
MS.gene073258.t1 MTR_3g074320 27.445 317 210 7 213 520 31 336 1.72e-31 124
MS.gene073258.t1 MTR_3g074340 27.987 318 207 8 213 520 31 336 3.11e-31 124
MS.gene073258.t1 MTR_3g074380 25.779 353 230 9 51 382 23 364 8.32e-31 123
MS.gene073258.t1 MTR_3g074370 28.333 300 195 6 213 502 31 320 2.52e-30 121
MS.gene073258.t1 MTR_5g024740 33.197 244 154 7 55 295 4 241 4.63e-30 125
MS.gene073258.t1 MTR_5g024740 32.099 243 150 7 287 517 487 726 2.95e-19 92.0
MS.gene073258.t1 MTR_4g116790 24.438 356 241 6 45 381 17 363 7.14e-30 121
MS.gene073258.t1 MTR_5g044910 34.016 244 152 7 55 295 4 241 8.13e-29 121
MS.gene073258.t1 MTR_5g044910 31.858 226 141 6 287 502 485 707 1.93e-19 92.4
MS.gene073258.t1 MTR_8g073100 33.047 233 150 5 53 280 2 233 1.84e-27 117
MS.gene073258.t1 MTR_8g073100 28.125 224 148 4 289 502 485 705 9.64e-15 77.8
MS.gene073258.t1 MTR_3g118530 34.536 194 123 4 66 256 15 207 2.84e-27 116
MS.gene073258.t1 MTR_3g118530 33.645 214 127 5 66 276 15 216 3.27e-27 116
MS.gene073258.t1 MTR_3g118530 34.513 226 135 5 287 502 505 727 1.12e-23 105
MS.gene073258.t1 MTR_3g074400 22.573 412 265 13 101 492 39 416 3.24e-19 90.5
MS.gene073258.t1 MTR_1g074940 24.533 428 279 13 105 495 80 500 2.04e-16 82.4
MS.gene073258.t1 MTR_5g096000 29.167 168 117 2 38 204 6 172 8.55e-14 72.8
MS.gene073258.t1 MTR_4g081490 25.862 406 235 22 113 495 71 433 9.73e-13 70.9
MS.gene073258.t1 MTR_3g082700 23.702 443 280 14 104 495 76 511 1.22e-12 70.9
MS.gene073258.t1 MTR_5g077590 45.783 83 45 0 410 492 304 386 1.68e-12 69.7
MS.gene073258.t1 MTR_4g005090 24.089 494 294 19 53 497 27 488 1.83e-12 70.1
MS.gene073258.t1 MTR_1g069935 22.921 445 292 14 99 499 75 512 2.58e-12 69.7
MS.gene073258.t1 MTR_4g064807 39.474 76 46 0 424 499 1 76 3.77e-11 59.7
MS.gene073258.t1 MTR_1g074930 23.881 469 295 16 104 519 75 534 4.84e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073258.t1 AT2G20780 70.857 525 141 4 5 525 7 523 0.0 748
MS.gene073258.t1 AT2G20780 73.756 442 114 1 84 525 26 465 0.0 666
MS.gene073258.t1 AT3G18830 47.976 494 237 5 47 524 31 520 8.04e-161 468
MS.gene073258.t1 AT2G16120 47.166 494 240 4 45 517 16 509 1.34e-156 456
MS.gene073258.t1 AT2G16130 47.154 492 237 4 45 513 16 507 1.57e-155 454
MS.gene073258.t1 AT4G36670 46.737 475 238 4 46 505 8 482 1.62e-150 440
MS.gene073258.t1 AT2G18480 47.589 477 236 4 40 502 7 483 1.01e-148 436
MS.gene073258.t1 AT2G43330 32.937 504 312 10 37 526 16 507 2.90e-71 236
MS.gene073258.t1 AT5G17010 29.980 507 305 11 21 499 15 499 4.52e-69 230
MS.gene073258.t1 AT5G17010 29.980 507 305 11 21 499 15 499 4.52e-69 230
MS.gene073258.t1 AT5G17010 29.980 507 305 11 21 499 15 499 4.52e-69 230
MS.gene073258.t1 AT5G16150 33.197 488 302 10 23 504 75 544 7.30e-68 228
MS.gene073258.t1 AT5G16150 33.197 488 302 10 23 504 75 544 7.30e-68 228
MS.gene073258.t1 AT5G16150 33.197 488 302 10 23 504 75 544 7.30e-68 228
MS.gene073258.t1 AT1G75220 30.409 513 321 10 1 503 1 487 1.80e-65 220
MS.gene073258.t1 AT1G19450 30.620 516 317 13 1 503 1 488 8.56e-64 216
MS.gene073258.t1 AT5G59250 30.595 487 307 10 34 499 77 553 1.68e-63 217
MS.gene073258.t1 AT3G05150 30.738 488 307 9 21 501 5 468 6.75e-63 213
MS.gene073258.t1 AT3G05150 30.738 488 307 9 21 501 5 468 6.75e-63 213
MS.gene073258.t1 AT3G05150 30.738 488 307 9 21 501 5 468 8.34e-63 213
MS.gene073258.t1 AT1G08930 29.839 496 310 10 22 505 25 494 1.81e-62 213
MS.gene073258.t1 AT1G08930 29.839 496 310 10 22 505 25 494 1.81e-62 213
MS.gene073258.t1 AT3G03090 30.174 517 300 14 21 499 6 499 6.44e-61 209
MS.gene073258.t1 AT3G05165 28.601 479 312 8 31 499 2 460 2.20e-60 206
MS.gene073258.t1 AT3G05165 28.601 479 312 8 31 499 2 460 2.20e-60 206
MS.gene073258.t1 AT3G05165 28.601 479 312 8 31 499 2 460 2.20e-60 206
MS.gene073258.t1 AT2G48020 31.158 475 293 9 31 499 12 458 9.46e-60 204
MS.gene073258.t1 AT2G48020 31.158 475 293 9 31 499 12 458 9.46e-60 204
MS.gene073258.t1 AT3G05160 28.723 470 299 9 40 499 8 451 7.50e-59 202
MS.gene073258.t1 AT5G18840 31.174 494 302 11 22 505 16 481 1.13e-58 202
MS.gene073258.t1 AT5G27350 29.873 472 293 12 43 500 15 462 1.69e-58 201
MS.gene073258.t1 AT5G27360 29.193 483 314 11 27 499 1 465 4.75e-58 201
MS.gene073258.t1 AT5G27360 29.193 483 314 11 27 499 49 513 2.79e-57 199
MS.gene073258.t1 AT1G54730 30.496 423 268 9 83 499 60 462 2.22e-56 196
MS.gene073258.t1 AT4G04760 30.128 468 289 11 51 505 28 470 7.36e-56 194
MS.gene073258.t1 AT3G05155 29.936 471 281 11 45 499 18 455 1.61e-55 193
MS.gene073258.t1 AT4G04760 31.019 432 265 9 85 505 2 411 3.49e-55 191
MS.gene073258.t1 AT3G05160 29.216 421 272 7 85 499 2 402 9.57e-55 190
MS.gene073258.t1 AT3G05160 29.216 421 272 7 85 499 2 402 9.57e-55 190
MS.gene073258.t1 AT4G04750 28.794 514 320 14 14 505 29 518 1.32e-54 192
MS.gene073258.t1 AT5G26250 29.317 498 315 12 54 526 21 506 4.24e-54 191
MS.gene073258.t1 AT4G04750 29.237 472 299 12 45 505 27 474 4.72e-54 190
MS.gene073258.t1 AT4G04750 29.237 472 299 12 45 505 27 474 4.72e-54 190
MS.gene073258.t1 AT1G08900 30.641 421 270 8 83 499 11 413 1.24e-52 184
MS.gene073258.t1 AT1G08900 30.641 421 270 8 83 499 45 447 1.69e-52 185
MS.gene073258.t1 AT1G08900 28.810 479 310 10 25 499 4 455 1.89e-52 185
MS.gene073258.t1 AT1G08900 28.810 479 310 10 25 499 4 455 1.89e-52 185
MS.gene073258.t1 AT3G19940 27.292 480 310 11 54 505 24 492 5.99e-52 185
MS.gene073258.t1 AT1G08890 29.892 465 294 11 45 499 15 457 8.83e-52 183
MS.gene073258.t1 AT1G50310 27.140 479 313 11 54 505 24 493 1.26e-51 184
MS.gene073258.t1 AT4G04760 28.879 464 297 11 51 505 28 467 6.33e-51 181
MS.gene073258.t1 AT1G77210 27.395 522 318 20 35 520 8 504 2.58e-50 180
MS.gene073258.t1 AT1G77210 27.395 522 318 20 35 520 8 504 2.58e-50 180
MS.gene073258.t1 AT3G05960 27.108 498 329 10 54 527 20 507 4.92e-50 179
MS.gene073258.t1 AT5G26340 26.800 500 325 10 55 525 24 511 7.02e-50 179
MS.gene073258.t1 AT1G05030 30.159 441 295 7 62 500 86 515 8.05e-49 177
MS.gene073258.t1 AT1G08920 28.298 470 297 11 45 499 18 462 1.18e-48 175
MS.gene073258.t1 AT1G30220 33.435 329 211 5 54 378 27 351 1.97e-48 177
MS.gene073258.t1 AT1G30220 45.833 96 52 0 410 505 464 559 1.37e-18 89.7
MS.gene073258.t1 AT3G05400 28.178 472 300 12 45 504 17 461 2.68e-48 174
MS.gene073258.t1 AT4G02050 25.610 492 326 9 41 505 13 491 8.27e-48 174
MS.gene073258.t1 AT4G02050 25.610 492 326 9 41 505 13 491 8.27e-48 174
MS.gene073258.t1 AT3G05165 27.523 436 287 7 31 456 2 418 1.19e-47 173
MS.gene073258.t1 AT1G67300 30.196 510 307 17 15 500 3 487 1.95e-47 172
MS.gene073258.t1 AT1G67300 30.196 510 307 17 15 500 3 487 1.95e-47 172
MS.gene073258.t1 AT2G35740 32.059 340 212 7 54 382 25 356 2.46e-47 174
MS.gene073258.t1 AT2G35740 39.806 103 62 0 401 503 458 560 1.71e-17 86.3
MS.gene073258.t1 AT3G05165 27.765 425 278 7 31 445 2 407 3.02e-47 171
MS.gene073258.t1 AT3G05165 27.765 425 278 7 31 445 2 407 3.02e-47 171
MS.gene073258.t1 AT4G16480 31.714 350 216 6 54 390 26 365 3.07e-47 173
MS.gene073258.t1 AT4G16480 36.066 122 70 1 401 514 459 580 2.38e-17 85.5
MS.gene073258.t1 AT4G16480 31.714 350 216 6 54 390 26 365 3.07e-47 173
MS.gene073258.t1 AT4G16480 36.066 122 70 1 401 514 459 580 2.38e-17 85.5
MS.gene073258.t1 AT4G16480 31.714 350 216 6 54 390 26 365 3.07e-47 173
MS.gene073258.t1 AT4G16480 36.066 122 70 1 401 514 459 580 2.38e-17 85.5
MS.gene073258.t1 AT1G54730 27.896 423 258 8 83 499 60 441 7.57e-47 169
MS.gene073258.t1 AT1G67300 30.137 511 307 17 15 500 3 488 9.08e-47 170
MS.gene073258.t1 AT5G27360 31.081 370 233 9 134 499 10 361 1.33e-46 167
MS.gene073258.t1 AT5G27360 31.081 370 233 9 134 499 10 361 1.33e-46 167
MS.gene073258.t1 AT1G08920 27.848 474 301 11 45 499 18 469 1.34e-46 169
MS.gene073258.t1 AT3G19930 26.680 491 315 12 51 511 20 495 9.56e-46 168
MS.gene073258.t1 AT3G19930 26.680 491 315 12 51 511 20 495 9.56e-46 168
MS.gene073258.t1 AT1G54730 29.474 380 243 8 83 456 60 420 1.93e-45 165
MS.gene073258.t1 AT1G11260 25.200 500 329 12 54 517 22 512 2.03e-45 167
MS.gene073258.t1 AT1G34580 27.181 493 310 13 51 509 21 498 6.45e-45 166
MS.gene073258.t1 AT5G17010 27.236 492 246 11 40 499 25 436 8.68e-45 164
MS.gene073258.t1 AT5G23270 25.451 499 324 11 46 511 15 498 1.17e-44 165
MS.gene073258.t1 AT1G34580 27.896 423 278 9 101 509 39 448 6.45e-44 162
MS.gene073258.t1 AT1G05030 28.482 481 318 10 22 500 7 463 8.54e-44 162
MS.gene073258.t1 AT1G07340 27.389 471 303 10 55 498 23 481 1.24e-43 162
MS.gene073258.t1 AT4G21480 26.653 484 308 13 54 505 22 490 8.13e-43 160
MS.gene073258.t1 AT3G05400 28.903 474 274 16 45 504 17 441 8.21e-43 158
MS.gene073258.t1 AT1G67300 30.222 450 265 17 15 440 3 427 2.33e-42 157
MS.gene073258.t1 AT1G67300 30.222 450 265 17 15 440 3 427 2.33e-42 157
MS.gene073258.t1 AT1G67300 30.222 450 265 17 15 440 3 427 3.46e-42 157
MS.gene073258.t1 AT1G67300 30.222 450 265 17 15 440 3 427 3.46e-42 157
MS.gene073258.t1 AT3G20460 27.169 438 289 10 70 499 68 483 1.19e-41 156
MS.gene073258.t1 AT1G79820 29.274 468 296 12 45 500 44 488 2.94e-41 155
MS.gene073258.t1 AT1G79820 29.274 468 296 12 45 500 44 488 2.94e-41 155
MS.gene073258.t1 AT5G27360 27.251 422 280 10 27 438 1 405 5.59e-41 153
MS.gene073258.t1 AT1G54730 29.261 352 224 8 83 428 60 392 9.28e-40 149
MS.gene073258.t1 AT1G54730 29.261 352 224 8 83 428 60 392 9.28e-40 149
MS.gene073258.t1 AT1G08900 26.835 436 289 9 25 456 4 413 2.69e-39 149
MS.gene073258.t1 AT1G50310 27.954 347 234 9 166 505 13 350 1.64e-38 145
MS.gene073258.t1 AT1G08920 26.588 425 277 9 45 456 18 420 4.98e-38 145
MS.gene073258.t1 AT5G61520 25.880 483 316 10 54 505 23 494 2.34e-36 142
MS.gene073258.t1 AT2G48020 28.291 357 228 6 54 404 33 367 2.64e-36 139
MS.gene073258.t1 AT1G54730 26.579 380 233 7 83 456 60 399 2.95e-36 140
MS.gene073258.t1 AT1G79820 28.814 413 265 10 45 448 44 436 3.50e-36 140
MS.gene073258.t1 AT2G48020 27.964 329 215 4 54 382 33 339 3.33e-35 135
MS.gene073258.t1 AT1G77210 27.493 371 228 14 167 520 9 355 3.68e-35 135
MS.gene073258.t1 AT3G51490 36.864 236 144 5 53 285 2 235 6.06e-35 140
MS.gene073258.t1 AT3G51490 32.900 231 138 5 284 502 495 720 8.11e-22 100
MS.gene073258.t1 AT3G51490 36.864 236 144 5 53 285 2 235 6.12e-35 140
MS.gene073258.t1 AT3G51490 29.870 231 137 5 284 502 495 712 5.32e-19 91.3
MS.gene073258.t1 AT3G05155 28.657 335 205 7 45 372 18 325 1.75e-34 132
MS.gene073258.t1 AT1G54730 28.947 304 196 6 69 372 50 333 8.95e-34 131
MS.gene073258.t1 AT5G61520 26.341 410 287 6 101 505 47 446 1.30e-33 133
MS.gene073258.t1 AT1G20840 36.449 214 124 5 59 266 8 215 7.39e-31 127
MS.gene073258.t1 AT1G20840 32.314 229 136 5 287 502 497 719 7.20e-22 100
MS.gene073258.t1 AT1G20840 36.449 214 124 5 59 266 8 215 7.39e-31 127
MS.gene073258.t1 AT1G20840 32.314 229 136 5 287 502 497 719 7.20e-22 100
MS.gene073258.t1 AT1G54730 26.420 352 213 8 83 428 60 371 1.49e-30 123
MS.gene073258.t1 AT1G54730 27.757 263 178 3 83 345 60 310 1.33e-29 119
MS.gene073258.t1 AT1G54730 27.757 263 178 3 83 345 60 310 1.33e-29 119
MS.gene073258.t1 AT3G51490 39.080 174 103 3 113 285 14 185 8.31e-27 115
MS.gene073258.t1 AT3G51490 32.900 231 138 5 284 502 445 670 9.94e-22 99.8
MS.gene073258.t1 AT4G35300 38.308 201 116 6 66 260 15 213 9.19e-27 115
MS.gene073258.t1 AT4G35300 32.751 229 133 6 288 502 495 716 1.44e-24 108
MS.gene073258.t1 AT4G35300 38.308 201 116 6 66 260 15 213 9.19e-27 115
MS.gene073258.t1 AT4G35300 32.751 229 133 6 288 502 495 716 1.44e-24 108
MS.gene073258.t1 AT4G35300 38.308 201 116 6 66 260 15 213 9.19e-27 115
MS.gene073258.t1 AT4G35300 32.751 229 133 6 288 502 495 716 1.44e-24 108
MS.gene073258.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.04e-26 115
MS.gene073258.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.48e-24 108
MS.gene073258.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.04e-26 115
MS.gene073258.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.48e-24 108
MS.gene073258.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.04e-26 115
MS.gene073258.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.48e-24 108
MS.gene073258.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.04e-26 115
MS.gene073258.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.48e-24 108
MS.gene073258.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.04e-26 115
MS.gene073258.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.48e-24 108
MS.gene073258.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.04e-26 115
MS.gene073258.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.48e-24 108
MS.gene073258.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.04e-26 115
MS.gene073258.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.48e-24 108
MS.gene073258.t1 AT1G79820 26.068 468 263 13 45 500 44 440 2.22e-25 109
MS.gene073258.t1 AT4G35300 32.751 229 133 6 288 502 308 529 6.25e-25 108
MS.gene073258.t1 AT5G43350 22.538 457 295 14 104 509 76 524 4.48e-14 75.1
MS.gene073258.t1 AT5G43340 22.936 436 292 14 105 505 82 508 7.49e-13 71.2
MS.gene073258.t1 AT2G38940 21.670 443 291 11 105 499 81 515 1.95e-12 70.1
MS.gene073258.t1 AT3G54700 22.768 448 294 13 105 509 81 519 1.48e-11 67.4
MS.gene073258.t1 AT3G54700 22.768 448 294 13 105 509 81 519 1.48e-11 67.4
MS.gene073258.t1 AT3G20660 26.269 453 267 26 85 518 120 524 1.69e-11 67.0
MS.gene073258.t1 AT1G16370 25.450 444 262 20 91 510 116 514 1.72e-11 67.0
MS.gene073258.t1 AT1G79820 37.162 148 85 3 357 500 235 378 6.22e-11 64.7

Find 124 sgRNAs with CRISPR-Local

Find 147 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGCGGCCATTAAAATTTC+TGG 0.104258 4.3:-55487242 None:intergenic
ACTCTTTCATTATTTGAAAA+AGG 0.138285 4.3:+55487428 MS.gene073258:CDS
AACAAAGACCGTCTTTATTT+TGG 0.219339 4.3:+55487313 MS.gene073258:CDS
TGTATCTCTATTGGGTAGTT+TGG 0.222757 4.3:+55486575 MS.gene073258:CDS
AAGGCCGGAAAACGCGTAAT+TGG 0.248896 4.3:-55486865 None:intergenic
TTGGACTCGGCCCTGTGTGC+TGG 0.254548 4.3:+55487510 MS.gene073258:CDS
TCTCTCAACAATGTTCTTCT+TGG 0.260513 4.3:+55486224 MS.gene073258:CDS
GACTGCTTGTTTGTTCTGTA+TGG 0.272711 4.3:+55487400 MS.gene073258:CDS
TTCTACCTACTTTATCAATA+AGG 0.275599 4.3:-55487346 None:intergenic
GCTGGAATTGGAATAGGTTT+TGG 0.278916 4.3:+55486729 MS.gene073258:CDS
TTTGAGTATTGTATCTCTAT+TGG 0.289099 4.3:+55486566 MS.gene073258:CDS
CAGATATTATTGGTAGAAAA+TGG 0.294464 4.3:+55486613 MS.gene073258:CDS
TCTTATCTTCCAATTGTTGT+TGG 0.306828 4.3:-55486157 None:intergenic
AAGATGATGTTCCGAGAAAA+TGG 0.317959 4.3:+55486035 None:intergenic
GTATCTCTATTGGGTAGTTT+GGG 0.319309 4.3:+55486576 MS.gene073258:CDS
CTTCTCATTACTAGCACAAT+TGG 0.327974 4.3:+55487374 MS.gene073258:CDS
AATGGGGAAATGGGTTTATC+TGG 0.330407 4.3:+55486059 MS.gene073258:CDS
GTACTTGTTCTTTGTTCCTA+AGG 0.334633 4.3:-55486087 None:intergenic
GGAAGATTGTTAGCTGGAAT+TGG 0.335016 4.3:+55486717 MS.gene073258:CDS
CTTCGCCGGATGCTGATTAC+TGG 0.337252 4.3:+55487161 MS.gene073258:CDS
CCGATCTTGCTTCGTCAATT+CGG 0.337686 4.3:-55487001 None:intergenic
TTGAGTATTGTATCTCTATT+GGG 0.346213 4.3:+55486567 MS.gene073258:CDS
TTGTTAGCTGGAATTGGAAT+AGG 0.355045 4.3:+55486723 MS.gene073258:CDS
CAACTTGTGCAGAACAAAAC+TGG 0.362425 4.3:+55487824 MS.gene073258:CDS
TCATTGTAATTCCACCCATT+TGG 0.368460 4.3:-55486662 None:intergenic
TCTAAAGATAACTGAGGTTC+AGG 0.370786 4.3:+55486524 MS.gene073258:CDS
GTCCTCGTATTTACCAGAAT+TGG 0.372355 4.3:-55487099 None:intergenic
GTATCCAACGCAATTTCTTT+CGG 0.383566 4.3:+55487641 MS.gene073258:CDS
TGAGAATGAACATGGGAGTC+AGG 0.384972 4.3:+55487772 MS.gene073258:CDS
AGAAAATGGTAATGGGGAAA+TGG 0.396059 4.3:+55486049 MS.gene073258:CDS
GGGCCCTTAGTGATTGCATT+AGG 0.398235 4.3:+55487449 MS.gene073258:CDS
CACTCGGAGCTGTAGCGAAT+AGG 0.400992 4.3:+55487582 MS.gene073258:CDS
TGTTCCGAGAAAATGGTAAT+GGG 0.402173 4.3:+55486042 MS.gene073258:CDS
ACTGCTTGTTTGTTCTGTAT+GGG 0.403559 4.3:+55487401 MS.gene073258:CDS
ATCATTAGTACTTGATATGA+AGG 0.422297 4.3:-55486693 None:intergenic
TGGACTCGGCCCTGTGTGCT+GGG 0.428193 4.3:+55487511 MS.gene073258:CDS
GATATCTCAGCAATATATAT+AGG 0.430921 4.3:-55486765 None:intergenic
CTCCGCCACCGGCACTTCGC+CGG 0.433846 4.3:+55487147 MS.gene073258:CDS
GGAAGAACATCAGATATTAT+TGG 0.433859 4.3:+55486603 MS.gene073258:CDS
TACTTGTTCTTTGTTCCTAA+GGG 0.434909 4.3:-55486086 None:intergenic
AACAATGTTCTTCTTGGCTA+TGG 0.435667 4.3:+55486230 MS.gene073258:CDS
GGTTTATCTGGAATTCCCTT+AGG 0.446327 4.3:+55486071 MS.gene073258:CDS
ACACTAGTACCTGAAACAAA+AGG 0.446951 4.3:+55487719 MS.gene073258:CDS
GGCTGCAGTTGTATTCCAAA+TGG 0.451381 4.3:+55486647 MS.gene073258:CDS
CGGATGCTGATTACTGGTCT+TGG 0.455359 4.3:+55487167 MS.gene073258:CDS
GCCTGAGCACGCACTCGTAA+AGG 0.455930 4.3:-55487554 None:intergenic
GCCTTTCGGTACACATAAGT+TGG 0.456022 4.3:+55486883 MS.gene073258:CDS
AACAACAATTGGAAGATAAG+AGG 0.456265 4.3:+55486159 MS.gene073258:CDS
AGTGAGCCTCTAGTGAGATT+TGG 0.456475 4.3:-55486789 None:intergenic
ACTCGGAGCTGTAGCGAATA+GGG 0.461405 4.3:+55487583 MS.gene073258:CDS
CCCTTTACGAGTGCGTGCTC+AGG 0.461504 4.3:+55487553 MS.gene073258:CDS
TTCTCATTACTAGCACAATT+GGG 0.462959 4.3:+55487375 MS.gene073258:CDS
CGTGCTCAGGCATCTGCACT+CGG 0.465823 4.3:+55487566 MS.gene073258:CDS
TCATATCAAGTACTAATGAT+TGG 0.466636 4.3:+55486696 MS.gene073258:CDS
CCGAATTGACGAAGCAAGAT+CGG 0.470119 4.3:+55487001 MS.gene073258:CDS
AAGATAAGAGGAACAGTACT+AGG 0.471084 4.3:+55486171 MS.gene073258:CDS
ATCAGCATCCGGCGAAGTGC+CGG 0.474492 4.3:-55487155 None:intergenic
AATACCTAATGCAATCACTA+AGG 0.478312 4.3:-55487453 None:intergenic
CTGCTTGTTTGTTCTGTATG+GGG 0.479869 4.3:+55487402 MS.gene073258:CDS
ATTGTCCTTATTGATAAAGT+AGG 0.479964 4.3:+55487341 MS.gene073258:CDS
CCTGAGCACGCACTCGTAAA+GGG 0.483401 4.3:-55487553 None:intergenic
CTATTGGGTAGTTTGGGTGG+TGG 0.488972 4.3:+55486582 MS.gene073258:CDS
ATGTTCCGAGAAAATGGTAA+TGG 0.490548 4.3:+55486041 MS.gene073258:CDS
ATCCGGCGAAGTGCCGGTGG+CGG 0.497536 4.3:-55487149 None:intergenic
GAAAATGGTAATGGGGAAAT+GGG 0.497564 4.3:+55486050 MS.gene073258:CDS
GAGGCTAGCAGAAATACAAC+AGG 0.497842 4.3:+55487064 MS.gene073258:CDS
CACTAGTACCTGAAACAAAA+GGG 0.508537 4.3:+55487720 MS.gene073258:CDS
AAACGAAGACGAGAAAGAAG+TGG 0.520687 4.3:+55487037 MS.gene073258:CDS
CAAGACCAGTAATCAGCATC+CGG 0.526849 4.3:-55487166 None:intergenic
ATGATTGGAAGATTGTTAGC+TGG 0.528824 4.3:+55486711 MS.gene073258:CDS
ACTTATGTGTACCGAAAGGC+CGG 0.528846 4.3:-55486880 None:intergenic
ATAAATGTAGGAATTATGCT+TGG 0.533082 4.3:+55486834 MS.gene073258:CDS
CCAACGCAATTTCTTTCGGC+GGG 0.535097 4.3:+55487645 MS.gene073258:CDS
GACGGTCTTTGTTATACCTA+CGG 0.535206 4.3:-55487303 None:intergenic
CAGGGAAAAGAGATGGAGCT+AGG 0.539460 4.3:+55487791 MS.gene073258:CDS
TGCTTGTTTGTTCTGTATGG+GGG 0.543348 4.3:+55487403 MS.gene073258:CDS
GCTGCAGTTGTATTCCAAAT+GGG 0.552850 4.3:+55486648 MS.gene073258:CDS
ACCAACCATCTCGGCGACTC+AGG 0.557547 4.3:-55486969 None:intergenic
TCTCTATTGGGTAGTTTGGG+TGG 0.559075 4.3:+55486579 MS.gene073258:CDS
GCAGAAATACAACAGGCTGC+TGG 0.560147 4.3:+55487071 MS.gene073258:CDS
CAATTGTGCTAGTAATGAGA+AGG 0.568147 4.3:-55487373 None:intergenic
TCATTAGTACTTGATATGAA+GGG 0.569168 4.3:-55486692 None:intergenic
TGAATTGCTCTCTCCGCCAC+CGG 0.570461 4.3:+55487136 MS.gene073258:CDS
TCCTGAGTCGCCGAGATGGT+TGG 0.572336 4.3:+55486968 MS.gene073258:CDS
TGGGAGTCAGGGAAAAGAGA+TGG 0.575169 4.3:+55487784 MS.gene073258:CDS
GAGAATGAACATGGGAGTCA+GGG 0.577348 4.3:+55487773 MS.gene073258:CDS
TGGAGAGTAATGCTTGCTGT+TGG 0.577364 4.3:+55486903 MS.gene073258:CDS
GAACAAAGAACAAGTACAAG+AGG 0.581349 4.3:+55486093 MS.gene073258:CDS
AGCATCCGGCGAAGTGCCGG+TGG 0.584485 4.3:-55487152 None:intergenic
AAAGGAAAGACATGGCTACA+AGG 0.585745 4.3:-55487616 None:intergenic
AGAGAGCAATTCACGCCACA+CGG 0.586023 4.3:-55487126 None:intergenic
TTCTGCATTACCAACCATCT+CGG 0.587579 4.3:-55486978 None:intergenic
TAGAAAATGGACAATGGCAT+TGG 0.591364 4.3:+55486626 MS.gene073258:CDS
AATTGTGCTAGTAATGAGAA+GGG 0.597166 4.3:-55487372 None:intergenic
GCAGATGTGGGTGTGATGAG+TGG 0.598876 4.3:+55486477 MS.gene073258:intron
TTATTCCTGAGTCGCCGAGA+TGG 0.599472 4.3:+55486964 MS.gene073258:CDS
CCCGCCGAAAGAAATTGCGT+TGG 0.604005 4.3:-55487645 None:intergenic
ATACCTAATGCAATCACTAA+GGG 0.608156 4.3:-55487452 None:intergenic
TACTTTATCAATAAGGACAA+TGG 0.612652 4.3:-55487339 None:intergenic
ATGATGTTTGAGAATGAACA+TGG 0.614564 4.3:+55487764 MS.gene073258:CDS
TCCAACGCAATTTCTTTCGG+CGG 0.616866 4.3:+55487644 MS.gene073258:CDS
AAATTGCGTTGGATACAGAA+AGG 0.618168 4.3:-55487634 None:intergenic
ACGAGAAAGAAGTGGAAGAG+AGG 0.619835 4.3:+55487045 MS.gene073258:CDS
CATTAGTACTTGATATGAAG+GGG 0.622524 4.3:-55486691 None:intergenic
GCAAAACCAATGAACACTGA+AGG 0.623428 4.3:-55486933 None:intergenic
TGATTTATCTTCAATTCCAG+CGG 0.623893 4.3:-55487258 None:intergenic
GATGTCAAAACCCAGCACAC+AGG 0.624176 4.3:-55487521 None:intergenic
ATGTCAAAACCCAGCACACA+GGG 0.635080 4.3:-55487520 None:intergenic
GCAGTTGTATTCCAAATGGG+TGG 0.636411 4.3:+55486651 MS.gene073258:CDS
TGCCAATTCTGGTAAATACG+AGG 0.640126 4.3:+55487097 MS.gene073258:CDS
ATATCACCAAATCTCACTAG+AGG 0.642480 4.3:+55486783 MS.gene073258:CDS
CTAGCTGCTACTGTTGCCGT+AGG 0.648188 4.3:+55487287 MS.gene073258:CDS
TATTGGTAGAAAATGGACAA+TGG 0.649056 4.3:+55486620 MS.gene073258:CDS
GAGAGCAATTCACGCCACAC+GGG 0.655886 4.3:-55487125 None:intergenic
TAGTGTGAAAACAAAGACAA+TGG 0.657278 4.3:-55487702 None:intergenic
GTTCCGAGAAAATGGTAATG+GGG 0.658174 4.3:+55486043 MS.gene073258:CDS
ATTGTGCTAGTAATGAGAAG+GGG 0.672038 4.3:-55487371 None:intergenic
TCCAACTTATGTGTACCGAA+AGG 0.681195 4.3:-55486884 None:intergenic
AATGGCGACCAAAATAAAGA+CGG 0.682280 4.3:-55487321 None:intergenic
GTAGCGAATAGGGTTTGCAG+CGG 0.685373 4.3:+55487593 MS.gene073258:CDS
AGAAGATCTAAAGATAACTG+AGG 0.686492 4.3:+55486518 MS.gene073258:CDS
GGATACAGAAAGGAAAGACA+TGG 0.687966 4.3:-55487624 None:intergenic
TGATGTTTGAGAATGAACAT+GGG 0.695121 4.3:+55487765 MS.gene073258:CDS
AATACGAGGACAAACCCGTG+TGG 0.757333 4.3:+55487111 MS.gene073258:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTGAGATGATTTTTA+CGG + chr4.3:55486432-55486451 MS.gene073258:intron 15.0%
!! ACTCTTTCATTATTTGAAAA+AGG + chr4.3:55487428-55487447 MS.gene073258:CDS 20.0%
!! CTCTTTCATTATTTGAAAAA+GGG + chr4.3:55487429-55487448 MS.gene073258:CDS 20.0%
!!! CTGTATGTGTTATTAATTAT+GGG + chr4.3:55486407-55486426 MS.gene073258:intron 20.0%
!!! TCTGTATGTGTTATTAATTA+TGG + chr4.3:55486406-55486425 MS.gene073258:intron 20.0%
!!! TTTATTGAGATGATTTTTAC+GGG + chr4.3:55486433-55486452 MS.gene073258:intron 20.0%
! ATAAATGTAGGAATTATGCT+TGG + chr4.3:55486834-55486853 MS.gene073258:CDS 25.0%
! ATCATTAGTACTTGATATGA+AGG - chr4.3:55486696-55486715 None:intergenic 25.0%
! ATTGTCCTTATTGATAAAGT+AGG + chr4.3:55487341-55487360 MS.gene073258:CDS 25.0%
! CAGATATTATTGGTAGAAAA+TGG + chr4.3:55486613-55486632 MS.gene073258:CDS 25.0%
! CCTACATTTATAAAAATCTC+TGG - chr4.3:55486825-55486844 None:intergenic 25.0%
! GATATCTCAGCAATATATAT+AGG - chr4.3:55486768-55486787 None:intergenic 25.0%
! TACTTTATCAATAAGGACAA+TGG - chr4.3:55487342-55487361 None:intergenic 25.0%
! TCATATCAAGTACTAATGAT+TGG + chr4.3:55486696-55486715 MS.gene073258:CDS 25.0%
! TCATTAGTACTTGATATGAA+GGG - chr4.3:55486695-55486714 None:intergenic 25.0%
! TTCTACCTACTTTATCAATA+AGG - chr4.3:55487349-55487368 None:intergenic 25.0%
!! CCAGAGATTTTTATAAATGT+AGG + chr4.3:55486822-55486841 MS.gene073258:CDS 25.0%
!! TTACAGTCCAGAAATTTTAA+TGG + chr4.3:55487235-55487254 MS.gene073258:CDS 25.0%
!! TTGAGTATTGTATCTCTATT+GGG + chr4.3:55486567-55486586 MS.gene073258:CDS 25.0%
!! TTTGAGTATTGTATCTCTAT+TGG + chr4.3:55486566-55486585 MS.gene073258:CDS 25.0%
!!! TGGAAATGTAGCATTTTTTT+CGG + chr4.3:55487487-55487506 MS.gene073258:CDS 25.0%
AACAACAATTGGAAGATAAG+AGG + chr4.3:55486159-55486178 MS.gene073258:CDS 30.0%
AATACCTAATGCAATCACTA+AGG - chr4.3:55487456-55487475 None:intergenic 30.0%
AATTGTGCTAGTAATGAGAA+GGG - chr4.3:55487375-55487394 None:intergenic 30.0%
AGAAGATCTAAAGATAACTG+AGG + chr4.3:55486518-55486537 MS.gene073258:CDS 30.0%
ATACCTAATGCAATCACTAA+GGG - chr4.3:55487455-55487474 None:intergenic 30.0%
ATGATGTTTGAGAATGAACA+TGG + chr4.3:55487764-55487783 MS.gene073258:CDS 30.0%
CATTAGTACTTGATATGAAG+GGG - chr4.3:55486694-55486713 None:intergenic 30.0%
GGAAGAACATCAGATATTAT+TGG + chr4.3:55486603-55486622 MS.gene073258:CDS 30.0%
TACTTGTTCTTTGTTCCTAA+GGG - chr4.3:55486089-55486108 None:intergenic 30.0%
TAGTGTGAAAACAAAGACAA+TGG - chr4.3:55487705-55487724 None:intergenic 30.0%
TATTGGTAGAAAATGGACAA+TGG + chr4.3:55486620-55486639 MS.gene073258:CDS 30.0%
TCTTATCTTCCAATTGTTGT+TGG - chr4.3:55486160-55486179 None:intergenic 30.0%
TGATGTTTGAGAATGAACAT+GGG + chr4.3:55487765-55487784 MS.gene073258:CDS 30.0%
TGATTTATCTTCAATTCCAG+CGG - chr4.3:55487261-55487280 None:intergenic 30.0%
TTCTCATTACTAGCACAATT+GGG + chr4.3:55487375-55487394 MS.gene073258:CDS 30.0%
! GTTCAGGTAGAATTTTTGAT+TGG + chr4.3:55486540-55486559 MS.gene073258:CDS 30.0%
! TTAGGTATTCTTTTTGTCTG+TGG + chr4.3:55487467-55487486 MS.gene073258:CDS 30.0%
! TTGTGAATTTTTGCAGATGT+GGG + chr4.3:55486465-55486484 MS.gene073258:intron 30.0%
! TTTGTGAATTTTTGCAGATG+TGG + chr4.3:55486464-55486483 MS.gene073258:intron 30.0%
!! AACAAAGACCGTCTTTATTT+TGG + chr4.3:55487313-55487332 MS.gene073258:CDS 30.0%
!!! AATGTAGCATTTTTTTCGGT+TGG + chr4.3:55487491-55487510 MS.gene073258:CDS 30.0%
AAATTGCGTTGGATACAGAA+AGG - chr4.3:55487637-55487656 None:intergenic 35.0%
AACAATGTTCTTCTTGGCTA+TGG + chr4.3:55486230-55486249 MS.gene073258:CDS 35.0%
AAGATAAGAGGAACAGTACT+AGG + chr4.3:55486171-55486190 MS.gene073258:CDS 35.0%
AATGGCGACCAAAATAAAGA+CGG - chr4.3:55487324-55487343 None:intergenic 35.0%
ACACTAGTACCTGAAACAAA+AGG + chr4.3:55487719-55487738 MS.gene073258:CDS 35.0%
ACTGCTTGTTTGTTCTGTAT+GGG + chr4.3:55487401-55487420 MS.gene073258:CDS 35.0%
ATATCACCAAATCTCACTAG+AGG + chr4.3:55486783-55486802 MS.gene073258:CDS 35.0%
ATGATTGGAAGATTGTTAGC+TGG + chr4.3:55486711-55486730 MS.gene073258:CDS 35.0%
ATGTTCCGAGAAAATGGTAA+TGG + chr4.3:55486041-55486060 MS.gene073258:CDS 35.0%
ATTGTGCTAGTAATGAGAAG+GGG - chr4.3:55487374-55487393 None:intergenic 35.0%
CAATTGTGCTAGTAATGAGA+AGG - chr4.3:55487376-55487395 None:intergenic 35.0%
CACTAGTACCTGAAACAAAA+GGG + chr4.3:55487720-55487739 MS.gene073258:CDS 35.0%
CTTCTCATTACTAGCACAAT+TGG + chr4.3:55487374-55487393 MS.gene073258:CDS 35.0%
GAACAAAGAACAAGTACAAG+AGG + chr4.3:55486093-55486112 MS.gene073258:CDS 35.0%
GTACTTGTTCTTTGTTCCTA+AGG - chr4.3:55486090-55486109 None:intergenic 35.0%
GTATCCAACGCAATTTCTTT+CGG + chr4.3:55487641-55487660 MS.gene073258:CDS 35.0%
GTATCTCTATTGGGTAGTTT+GGG + chr4.3:55486576-55486595 MS.gene073258:CDS 35.0%
TAGAAAATGGACAATGGCAT+TGG + chr4.3:55486626-55486645 MS.gene073258:CDS 35.0%
TCATTGTAATTCCACCCATT+TGG - chr4.3:55486665-55486684 None:intergenic 35.0%
TCTAAAGATAACTGAGGTTC+AGG + chr4.3:55486524-55486543 MS.gene073258:CDS 35.0%
TCTCTCAACAATGTTCTTCT+TGG + chr4.3:55486224-55486243 MS.gene073258:CDS 35.0%
TGTATCTCTATTGGGTAGTT+TGG + chr4.3:55486575-55486594 MS.gene073258:CDS 35.0%
TGTTCCGAGAAAATGGTAAT+GGG + chr4.3:55486042-55486061 MS.gene073258:CDS 35.0%
TTGTTAGCTGGAATTGGAAT+AGG + chr4.3:55486723-55486742 MS.gene073258:CDS 35.0%
! ATTTTGCCTTCAGTGTTCAT+TGG + chr4.3:55486927-55486946 MS.gene073258:CDS 35.0%
! CAGTGTTTTCAACAAATCTC+TGG + chr4.3:55487194-55487213 MS.gene073258:CDS 35.0%
! TGTTTTGCACCAACAACAAT+TGG + chr4.3:55486148-55486167 MS.gene073258:CDS 35.0%
! TTTCCCCATTACCATTTTCT+CGG - chr4.3:55486049-55486068 None:intergenic 35.0%
!! AATGACTTCCCTTTTGTTTC+AGG - chr4.3:55487731-55487750 None:intergenic 35.0%
!! AGAAAATGGTAATGGGGAAA+TGG + chr4.3:55486049-55486068 MS.gene073258:CDS 35.0%
!! GAAAATGGTAATGGGGAAAT+GGG + chr4.3:55486050-55486069 MS.gene073258:CDS 35.0%
AAACGAAGACGAGAAAGAAG+TGG + chr4.3:55487037-55487056 MS.gene073258:CDS 40.0%
AAAGGAAAGACATGGCTACA+AGG - chr4.3:55487619-55487638 None:intergenic 40.0%
CAACTTGTGCAGAACAAAAC+TGG + chr4.3:55487824-55487843 MS.gene073258:CDS 40.0%
CTGCTTGTTTGTTCTGTATG+GGG + chr4.3:55487402-55487421 MS.gene073258:CDS 40.0%
GACTGCTTGTTTGTTCTGTA+TGG + chr4.3:55487400-55487419 MS.gene073258:CDS 40.0%
GCAAAACCAATGAACACTGA+AGG - chr4.3:55486936-55486955 None:intergenic 40.0%
GCTGCAGTTGTATTCCAAAT+GGG + chr4.3:55486648-55486667 MS.gene073258:CDS 40.0%
GGAAGATTGTTAGCTGGAAT+TGG + chr4.3:55486717-55486736 MS.gene073258:CDS 40.0%
GGATACAGAAAGGAAAGACA+TGG - chr4.3:55487627-55487646 None:intergenic 40.0%
GTCCTCGTATTTACCAGAAT+TGG - chr4.3:55487102-55487121 None:intergenic 40.0%
TCCAACTTATGTGTACCGAA+AGG - chr4.3:55486887-55486906 None:intergenic 40.0%
TGCCAATTCTGGTAAATACG+AGG + chr4.3:55487097-55487116 MS.gene073258:CDS 40.0%
TGCTTGTTTGTTCTGTATGG+GGG + chr4.3:55487403-55487422 MS.gene073258:CDS 40.0%
TTCTGCATTACCAACCATCT+CGG - chr4.3:55486981-55487000 None:intergenic 40.0%
! AATGGGGAAATGGGTTTATC+TGG + chr4.3:55486059-55486078 MS.gene073258:CDS 40.0%
! GACGGTCTTTGTTATACCTA+CGG - chr4.3:55487306-55487325 None:intergenic 40.0%
! GCTGGAATTGGAATAGGTTT+TGG + chr4.3:55486729-55486748 MS.gene073258:CDS 40.0%
! GGTTTATCTGGAATTCCCTT+AGG + chr4.3:55486071-55486090 MS.gene073258:CDS 40.0%
! GTATCCAATTACGCGTTTTC+CGG + chr4.3:55486861-55486880 MS.gene073258:CDS 40.0%
! GTTCCGAGAAAATGGTAATG+GGG + chr4.3:55486043-55486062 MS.gene073258:CDS 40.0%
!!! GCATTTTTTTCGGTTGGACT+CGG + chr4.3:55487497-55487516 MS.gene073258:CDS 40.0%
ACGAGAAAGAAGTGGAAGAG+AGG + chr4.3:55487045-55487064 MS.gene073258:CDS 45.0%
ACTTATGTGTACCGAAAGGC+CGG - chr4.3:55486883-55486902 None:intergenic 45.0%
AGTGAGCCTCTAGTGAGATT+TGG - chr4.3:55486792-55486811 None:intergenic 45.0%
ATGTCAAAACCCAGCACACA+GGG - chr4.3:55487523-55487542 None:intergenic 45.0%
CAAGACCAGTAATCAGCATC+CGG - chr4.3:55487169-55487188 None:intergenic 45.0%
CCAGCGGCCATTAAAATTTC+TGG - chr4.3:55487245-55487264 None:intergenic 45.0%
CCGAATTGACGAAGCAAGAT+CGG + chr4.3:55487001-55487020 MS.gene073258:CDS 45.0%
CCGATCTTGCTTCGTCAATT+CGG - chr4.3:55487004-55487023 None:intergenic 45.0%
GAGAATGAACATGGGAGTCA+GGG + chr4.3:55487773-55487792 MS.gene073258:CDS 45.0%
GAGGCTAGCAGAAATACAAC+AGG + chr4.3:55487064-55487083 MS.gene073258:CDS 45.0%
GCAGTTGTATTCCAAATGGG+TGG + chr4.3:55486651-55486670 MS.gene073258:CDS 45.0%
GCCTTTCGGTACACATAAGT+TGG + chr4.3:55486883-55486902 MS.gene073258:CDS 45.0%
GGCTGCAGTTGTATTCCAAA+TGG + chr4.3:55486647-55486666 MS.gene073258:CDS 45.0%
TCCAACGCAATTTCTTTCGG+CGG + chr4.3:55487644-55487663 MS.gene073258:CDS 45.0%
TCTCTATTGGGTAGTTTGGG+TGG + chr4.3:55486579-55486598 MS.gene073258:CDS 45.0%
TGAGAATGAACATGGGAGTC+AGG + chr4.3:55487772-55487791 MS.gene073258:CDS 45.0%
!! CCAGAAATTTTAATGGCCGC+TGG + chr4.3:55487242-55487261 MS.gene073258:CDS 45.0%
!! TGGAGAGTAATGCTTGCTGT+TGG + chr4.3:55486903-55486922 MS.gene073258:CDS 45.0%
AAGGCCGGAAAACGCGTAAT+TGG - chr4.3:55486868-55486887 None:intergenic 50.0%
AATACGAGGACAAACCCGTG+TGG + chr4.3:55487111-55487130 MS.gene073258:CDS 50.0%
ACTCGGAGCTGTAGCGAATA+GGG + chr4.3:55487583-55487602 MS.gene073258:CDS 50.0%
AGAGAGCAATTCACGCCACA+CGG - chr4.3:55487129-55487148 None:intergenic 50.0%
CAGGGAAAAGAGATGGAGCT+AGG + chr4.3:55487791-55487810 MS.gene073258:CDS 50.0%
CCAACGCAATTTCTTTCGGC+GGG + chr4.3:55487645-55487664 MS.gene073258:CDS 50.0%
CTATTGGGTAGTTTGGGTGG+TGG + chr4.3:55486582-55486601 MS.gene073258:CDS 50.0%
GATGTCAAAACCCAGCACAC+AGG - chr4.3:55487524-55487543 None:intergenic 50.0%
GCAGAAATACAACAGGCTGC+TGG + chr4.3:55487071-55487090 MS.gene073258:CDS 50.0%
GGGCCCTTAGTGATTGCATT+AGG + chr4.3:55487449-55487468 MS.gene073258:CDS 50.0%
GTAGCGAATAGGGTTTGCAG+CGG + chr4.3:55487593-55487612 MS.gene073258:CDS 50.0%
TGGGAGTCAGGGAAAAGAGA+TGG + chr4.3:55487784-55487803 MS.gene073258:CDS 50.0%
TTATTCCTGAGTCGCCGAGA+TGG + chr4.3:55486964-55486983 MS.gene073258:CDS 50.0%
! CGGATGCTGATTACTGGTCT+TGG + chr4.3:55487167-55487186 MS.gene073258:CDS 50.0%
! TTACGCGTTTTCCGGCCTTT+CGG + chr4.3:55486869-55486888 MS.gene073258:CDS 50.0%
!!! GCTGCTGGTTTTGCCAATTC+TGG + chr4.3:55487086-55487105 MS.gene073258:CDS 50.0%
CACTCGGAGCTGTAGCGAAT+AGG + chr4.3:55487582-55487601 MS.gene073258:CDS 55.0%
CCCGCCGAAAGAAATTGCGT+TGG - chr4.3:55487648-55487667 None:intergenic 55.0%
CCTGAGCACGCACTCGTAAA+GGG - chr4.3:55487556-55487575 None:intergenic 55.0%
CTAGCTGCTACTGTTGCCGT+AGG + chr4.3:55487287-55487306 MS.gene073258:CDS 55.0%
GAGAGCAATTCACGCCACAC+GGG - chr4.3:55487128-55487147 None:intergenic 55.0%
GCAGATGTGGGTGTGATGAG+TGG + chr4.3:55486477-55486496 MS.gene073258:intron 55.0%
TGAATTGCTCTCTCCGCCAC+CGG + chr4.3:55487136-55487155 MS.gene073258:CDS 55.0%
! CTTCGCCGGATGCTGATTAC+TGG + chr4.3:55487161-55487180 MS.gene073258:CDS 55.0%
ACCAACCATCTCGGCGACTC+AGG - chr4.3:55486972-55486991 None:intergenic 60.0%
ATCAGCATCCGGCGAAGTGC+CGG - chr4.3:55487158-55487177 None:intergenic 60.0%
CCCTTTACGAGTGCGTGCTC+AGG + chr4.3:55487553-55487572 MS.gene073258:CDS 60.0%
CGTGCTCAGGCATCTGCACT+CGG + chr4.3:55487566-55487585 MS.gene073258:CDS 60.0%
GCCTGAGCACGCACTCGTAA+AGG - chr4.3:55487557-55487576 None:intergenic 60.0%
TCCTGAGTCGCCGAGATGGT+TGG + chr4.3:55486968-55486987 MS.gene073258:CDS 60.0%
TGGACTCGGCCCTGTGTGCT+GGG + chr4.3:55487511-55487530 MS.gene073258:CDS 65.0%
TTGGACTCGGCCCTGTGTGC+TGG + chr4.3:55487510-55487529 MS.gene073258:CDS 65.0%
!! AGCATCCGGCGAAGTGCCGG+TGG - chr4.3:55487155-55487174 None:intergenic 70.0%
!! ATCCGGCGAAGTGCCGGTGG+CGG - chr4.3:55487152-55487171 None:intergenic 70.0%
CTCCGCCACCGGCACTTCGC+CGG + chr4.3:55487147-55487166 MS.gene073258:CDS 75.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 55486038 55487859 55486038 ID=MS.gene073258
chr4.3 mRNA 55486038 55487859 55486038 ID=MS.gene073258.t1;Parent=MS.gene073258
chr4.3 exon 55486038 55486251 55486038 ID=MS.gene073258.t1.exon1;Parent=MS.gene073258.t1
chr4.3 CDS 55486038 55486251 55486038 ID=cds.MS.gene073258.t1;Parent=MS.gene073258.t1
chr4.3 exon 55486481 55487859 55486481 ID=MS.gene073258.t1.exon2;Parent=MS.gene073258.t1
chr4.3 CDS 55486481 55487859 55486481 ID=cds.MS.gene073258.t1;Parent=MS.gene073258.t1
Gene Sequence

>MS.gene073258

ATGATGTTCCGAGAAAATGGTAATGGGGAAATGGGTTTATCTGGAATTCCCTTAGGAACAAAGAACAAGTACAAGAGGATGAATTCACAGCTTGTTGATGATAATGATGATGTTTTGCACCAACAACAATTGGAAGATAAGAGGAACAGTACTAGGAAATATGTTATTGCTTGTGCTATATTTGCTTCTCTCAACAATGTTCTTCTTGGCTATGGTATGCTTTCTTTGAAAAGTCTTTGACTTTGTTGATTTTTTGCGTTGACTTTGATTCTCTTTAGATTGTTCTTGATGATCTACAATGATTTTGATTCATTTTTGCATTTCTAGTAGCTAAGATAATAACAGATCTAAAATAATAATTCATCAATTCTGTATGTGTTATTAATTATGGGAGTTTTATTGAGATGATTTTTACGGGATTTTTGTTTTGTGAATTTTTGCAGATGTGGGTGTGATGAGTGGTGCAGTTATATTTATCAAAGAAGATCTAAAGATAACTGAGGTTCAGGTAGAATTTTTGATTGGTATTTTGAGTATTGTATCTCTATTGGGTAGTTTGGGTGGTGGAAGAACATCAGATATTATTGGTAGAAAATGGACAATGGCATTGGCTGCAGTTGTATTCCAAATGGGTGGAATTACAATGACTCTTGCCCCTTCATATCAAGTACTAATGATTGGAAGATTGTTAGCTGGAATTGGAATAGGTTTTGGAGTTATGATTTCACCTATATATATTGCTGAGATATCACCAAATCTCACTAGAGGCTCACTTACTACTTTTCCAGAGATTTTTATAAATGTAGGAATTATGCTTGGTTATGTATCCAATTACGCGTTTTCCGGCCTTTCGGTACACATAAGTTGGAGAGTAATGCTTGCTGTTGGAATTTTGCCTTCAGTGTTCATTGGTTTTGCTCTTTTCATTATTCCTGAGTCGCCGAGATGGTTGGTAATGCAGAACCGAATTGACGAAGCAAGATCGGTGCTGTTGAAAACAAACGAAGACGAGAAAGAAGTGGAAGAGAGGCTAGCAGAAATACAACAGGCTGCTGGTTTTGCCAATTCTGGTAAATACGAGGACAAACCCGTGTGGCGTGAATTGCTCTCTCCGCCACCGGCACTTCGCCGGATGCTGATTACTGGTCTTGGAATTCAGTGTTTTCAACAAATCTCTGGAATTGATGCAACTGTGTATTACAGTCCAGAAATTTTAATGGCCGCTGGAATTGAAGATAAATCAAAACTTCTAGCTGCTACTGTTGCCGTAGGTATAACAAAGACCGTCTTTATTTTGGTCGCCATTGTCCTTATTGATAAAGTAGGTAGAAAACCCCTTCTCATTACTAGCACAATTGGGATGACTGCTTGTTTGTTCTGTATGGGGGTTACTCTTTCATTATTTGAAAAAGGGCCCTTAGTGATTGCATTAGGTATTCTTTTTGTCTGTGGAAATGTAGCATTTTTTTCGGTTGGACTCGGCCCTGTGTGCTGGGTTTTGACATCTGAAATCTTCCCTTTACGAGTGCGTGCTCAGGCATCTGCACTCGGAGCTGTAGCGAATAGGGTTTGCAGCGGCCTTGTAGCCATGTCTTTCCTTTCTGTATCCAACGCAATTTCTTTCGGCGGGACATTTTTTCTGTTTTCTGCTATTTCTGCTCTTGCCATTGTCTTTGTTTTCACACTAGTACCTGAAACAAAAGGGAAGTCATTAGAACAAATTGAGATGATGTTTGAGAATGAACATGGGAGTCAGGGAAAAGAGATGGAGCTAGGTGATGTTGAACAACTTGTGCAGAACAAAACTGGTTTAACAAATTAG

Protein sequence

>MS.gene073258.t1

MMFRENGNGEMGLSGIPLGTKNKYKRMNSQLVDDNDDVLHQQQLEDKRNSTRKYVIACAIFASLNNVLLGYDVGVMSGAVIFIKEDLKITEVQVEFLIGILSIVSLLGSLGGGRTSDIIGRKWTMALAAVVFQMGGITMTLAPSYQVLMIGRLLAGIGIGFGVMISPIYIAEISPNLTRGSLTTFPEIFINVGIMLGYVSNYAFSGLSVHISWRVMLAVGILPSVFIGFALFIIPESPRWLVMQNRIDEARSVLLKTNEDEKEVEERLAEIQQAAGFANSGKYEDKPVWRELLSPPPALRRMLITGLGIQCFQQISGIDATVYYSPEILMAAGIEDKSKLLAATVAVGITKTVFILVAIVLIDKVGRKPLLITSTIGMTACLFCMGVTLSLFEKGPLVIALGILFVCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVANRVCSGLVAMSFLSVSNAISFGGTFFLFSAISALAIVFVFTLVPETKGKSLEQIEMMFENEHGSQGKEMELGDVEQLVQNKTGLTN