AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068492


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068492.t1 MTR_7g446340 99.057 530 5 0 1 530 1 530 0.0 1059
MS.gene068492.t1 MTR_6g007340 99.057 530 5 0 1 530 1 530 0.0 1059
MS.gene068492.t1 MTR_2g013310 66.027 521 172 1 4 524 7 522 0.0 700
MS.gene068492.t1 MTR_2g013310 68.597 449 141 0 76 524 1 449 0.0 630
MS.gene068492.t1 MTR_4g069500 48.126 507 242 6 41 527 12 517 2.09e-165 479
MS.gene068492.t1 MTR_3g116240 50.104 481 220 4 42 502 11 491 2.29e-165 479
MS.gene068492.t1 MTR_6g088450 47.660 470 241 2 30 494 33 502 2.34e-162 471
MS.gene068492.t1 MTR_4g072030 46.967 511 249 6 36 529 13 518 2.43e-161 469
MS.gene068492.t1 MTR_4g069500 48.291 468 225 5 76 527 1 467 3.85e-151 441
MS.gene068492.t1 MTR_8g103500 46.767 464 241 4 45 502 8 471 4.97e-151 442
MS.gene068492.t1 MTR_8g077890 44.400 500 262 5 38 521 2 501 4.75e-149 437
MS.gene068492.t1 MTR_5g075300 45.122 492 251 6 41 515 5 494 1.36e-145 428
MS.gene068492.t1 MTR_5g019870 38.477 486 281 4 49 517 9 493 1.24e-112 343
MS.gene068492.t1 MTR_4g069500 45.593 329 162 5 215 527 1 328 2.98e-88 275
MS.gene068492.t1 MTR_3g084110 34.468 470 288 7 54 514 27 485 2.42e-80 259
MS.gene068492.t1 MTR_1g116660 34.100 478 294 6 37 505 20 485 2.64e-77 252
MS.gene068492.t1 MTR_7g082270 34.426 488 295 10 18 499 31 499 7.94e-74 243
MS.gene068492.t1 MTR_6g018790 33.874 493 303 10 18 505 71 545 1.20e-71 238
MS.gene068492.t1 MTR_1g116650 32.359 479 288 6 37 505 63 515 1.52e-71 238
MS.gene068492.t1 MTR_7g005910 32.696 471 296 8 46 505 22 482 5.45e-71 235
MS.gene068492.t1 MTR_4g077740 29.191 507 317 12 17 499 9 497 3.37e-66 223
MS.gene068492.t1 MTR_5g020270 29.283 502 311 11 17 503 17 489 7.25e-66 221
MS.gene068492.t1 MTR_7g113970 31.062 499 286 12 28 500 27 493 3.65e-64 217
MS.gene068492.t1 MTR_8g077310 32.018 456 279 9 55 499 47 482 1.02e-63 216
MS.gene068492.t1 MTR_7g082270 34.499 429 256 10 18 440 31 440 6.83e-62 210
MS.gene068492.t1 MTR_5g077580 28.804 552 270 10 54 505 25 553 8.69e-62 213
MS.gene068492.t1 MTR_7g113960 29.167 504 314 11 21 515 2 471 9.59e-62 210
MS.gene068492.t1 MTR_5g020270 31.719 413 243 9 106 503 1 389 1.14e-61 207
MS.gene068492.t1 MTR_8g077300 29.365 504 312 10 16 502 1 477 6.83e-60 205
MS.gene068492.t1 MTR_8g077310 33.007 409 235 9 106 499 1 385 1.36e-59 202
MS.gene068492.t1 MTR_1g022315 30.342 468 280 9 55 503 49 489 1.92e-59 204
MS.gene068492.t1 MTR_7g094450 29.630 486 311 11 21 499 9 470 4.33e-58 201
MS.gene068492.t1 MTR_5g020270 28.144 501 297 13 17 503 17 468 1.00e-57 199
MS.gene068492.t1 MTR_4g118610 30.328 488 317 8 19 499 12 483 2.76e-57 199
MS.gene068492.t1 MTR_2g020710 29.857 489 315 9 19 499 12 480 2.57e-56 196
MS.gene068492.t1 MTR_1g022315 31.415 417 240 9 106 503 1 390 1.83e-55 191
MS.gene068492.t1 MTR_7g094110 29.498 478 300 11 28 499 26 472 3.17e-55 193
MS.gene068492.t1 MTR_2g020710 32.512 406 249 7 100 499 5 391 3.84e-53 185
MS.gene068492.t1 MTR_1g104750 27.254 488 316 8 55 514 23 499 3.53e-52 185
MS.gene068492.t1 MTR_2g026160 32.791 369 221 7 42 391 6 366 4.17e-51 184
MS.gene068492.t1 MTR_2g026160 41.304 92 54 0 413 504 467 558 1.83e-14 76.6
MS.gene068492.t1 MTR_2g049020 34.615 338 213 5 54 387 25 358 4.89e-51 184
MS.gene068492.t1 MTR_2g049020 43.750 96 54 0 410 505 461 556 4.88e-17 84.7
MS.gene068492.t1 MTR_3g074410 26.141 482 310 12 55 505 26 492 8.99e-51 181
MS.gene068492.t1 MTR_1g104770 27.629 485 310 9 51 506 20 492 9.88e-51 181
MS.gene068492.t1 MTR_0009s0370 28.457 499 311 12 51 517 18 502 1.19e-50 181
MS.gene068492.t1 MTR_3g008160 26.205 477 318 9 55 506 23 490 1.93e-50 181
MS.gene068492.t1 MTR_8g102860 27.579 504 320 12 47 520 19 507 2.61e-50 181
MS.gene068492.t1 MTR_5g006070 26.547 501 321 12 55 524 23 507 5.37e-50 180
MS.gene068492.t1 MTR_3g080240 29.675 492 316 14 21 499 54 528 7.02e-50 180
MS.gene068492.t1 MTR_8g102860 30.414 411 262 9 120 520 59 455 8.51e-50 178
MS.gene068492.t1 MTR_3g008160 27.251 411 285 6 101 506 40 441 8.08e-49 175
MS.gene068492.t1 MTR_5g006070 26.984 441 297 9 94 524 34 459 8.98e-49 175
MS.gene068492.t1 MTR_6g087040 27.406 478 311 12 54 505 25 492 3.10e-48 175
MS.gene068492.t1 MTR_6g088375 27.406 478 311 12 54 505 25 492 3.10e-48 175
MS.gene068492.t1 MTR_0204s0020 26.347 501 321 11 36 505 2 485 3.71e-48 174
MS.gene068492.t1 MTR_0204s0020 26.157 497 324 11 36 505 2 482 6.39e-48 173
MS.gene068492.t1 MTR_5g041550 26.446 484 317 11 51 505 20 493 7.12e-48 174
MS.gene068492.t1 MTR_3g023480 27.668 506 324 11 51 526 18 511 1.53e-47 173
MS.gene068492.t1 MTR_7g094110 28.330 473 292 10 28 499 26 452 5.99e-47 170
MS.gene068492.t1 MTR_4g064820 31.105 389 230 8 45 407 86 462 7.54e-47 171
MS.gene068492.t1 MTR_1g104780 25.963 493 315 10 62 520 29 505 7.97e-47 171
MS.gene068492.t1 MTR_1g038600 27.527 465 310 10 54 505 22 472 3.61e-46 169
MS.gene068492.t1 MTR_4g091370 27.397 511 319 12 45 516 14 511 6.14e-46 169
MS.gene068492.t1 MTR_4g090600 27.745 501 313 12 54 516 22 511 1.02e-45 168
MS.gene068492.t1 MTR_3g007910 26.078 487 309 10 38 505 6 460 1.49e-45 167
MS.gene068492.t1 MTR_3g074270 27.158 475 303 11 43 498 12 462 4.19e-45 166
MS.gene068492.t1 MTR_1g038630 26.653 484 308 11 54 505 22 490 4.41e-45 166
MS.gene068492.t1 MTR_0204s0040 25.963 493 315 11 45 505 19 493 5.53e-45 166
MS.gene068492.t1 MTR_2g048720 33.714 350 220 6 54 398 25 367 5.96e-45 167
MS.gene068492.t1 MTR_4g116770 25.963 493 315 11 45 505 215 689 3.38e-44 166
MS.gene068492.t1 MTR_8g077310 31.335 367 225 7 55 413 47 394 2.19e-43 159
MS.gene068492.t1 MTR_3g093060 26.014 419 292 8 101 511 42 450 2.59e-43 160
MS.gene068492.t1 MTR_3g008170 25.306 490 329 11 45 506 11 491 3.96e-43 160
MS.gene068492.t1 MTR_4g116790 24.458 507 343 11 45 525 17 509 4.94e-43 160
MS.gene068492.t1 MTR_3g074390 25.364 481 317 12 51 502 25 492 7.82e-43 160
MS.gene068492.t1 MTR_4g013205 28.542 480 305 11 33 500 17 470 1.35e-42 159
MS.gene068492.t1 MTR_2g020710 28.947 418 270 8 19 428 12 410 4.36e-42 156
MS.gene068492.t1 MTR_2g020710 29.017 417 269 8 19 427 12 409 4.51e-42 156
MS.gene068492.t1 MTR_6g087910 29.400 500 303 15 24 500 12 484 5.06e-42 157
MS.gene068492.t1 MTR_5g094760 23.935 493 337 9 39 505 11 491 1.63e-41 156
MS.gene068492.t1 MTR_4g118610 28.297 417 277 7 19 428 12 413 9.44e-41 152
MS.gene068492.t1 MTR_3g093010 25.470 479 307 10 62 505 29 492 2.32e-40 153
MS.gene068492.t1 MTR_2g026140 31.728 353 211 8 47 390 19 350 2.58e-40 154
MS.gene068492.t1 MTR_7g113970 28.333 420 247 10 28 421 27 418 9.70e-40 149
MS.gene068492.t1 MTR_7g091690 23.887 494 338 9 38 505 10 491 8.25e-39 148
MS.gene068492.t1 MTR_5g082540 25.203 492 326 11 42 505 13 490 1.76e-37 145
MS.gene068492.t1 MTR_2g020710 27.419 372 254 4 19 389 12 368 1.76e-37 142
MS.gene068492.t1 MTR_7g113960 26.087 391 254 8 21 404 2 364 9.57e-36 137
MS.gene068492.t1 MTR_3g116060 33.333 234 153 3 53 285 2 233 1.43e-32 132
MS.gene068492.t1 MTR_3g116060 31.600 250 155 7 265 502 472 717 8.77e-22 99.8
MS.gene068492.t1 MTR_3g074320 28.302 318 206 8 213 520 31 336 1.70e-31 124
MS.gene068492.t1 MTR_3g074340 27.987 318 207 8 213 520 31 336 3.26e-31 124
MS.gene068492.t1 MTR_3g074380 25.779 353 230 9 51 382 23 364 4.72e-31 124
MS.gene068492.t1 MTR_3g074370 28.667 300 194 6 213 502 31 320 2.40e-30 121
MS.gene068492.t1 MTR_5g024740 33.197 244 154 7 55 295 4 241 5.46e-30 125
MS.gene068492.t1 MTR_5g024740 32.099 243 150 7 287 517 487 726 3.09e-19 91.7
MS.gene068492.t1 MTR_4g116790 24.438 356 241 6 45 381 17 363 5.50e-30 121
MS.gene068492.t1 MTR_5g044910 32.377 244 156 6 55 295 4 241 9.92e-29 121
MS.gene068492.t1 MTR_5g044910 31.858 226 141 6 287 502 485 707 2.26e-19 92.4
MS.gene068492.t1 MTR_8g073100 33.047 233 150 5 53 280 2 233 2.09e-27 117
MS.gene068492.t1 MTR_8g073100 28.125 224 148 4 289 502 485 705 9.55e-15 77.8
MS.gene068492.t1 MTR_3g118530 34.536 194 123 4 66 256 15 207 3.41e-27 116
MS.gene068492.t1 MTR_3g118530 33.645 214 127 5 66 276 15 216 4.37e-27 116
MS.gene068492.t1 MTR_3g118530 34.513 226 135 5 287 502 505 727 1.07e-23 105
MS.gene068492.t1 MTR_3g074400 22.573 412 265 13 101 492 39 416 4.04e-19 90.1
MS.gene068492.t1 MTR_1g074940 24.533 428 279 13 105 495 80 500 2.68e-16 82.0
MS.gene068492.t1 MTR_5g096000 29.167 168 117 2 38 204 6 172 3.94e-14 73.9
MS.gene068492.t1 MTR_4g081490 25.862 406 235 22 113 495 71 433 8.30e-13 70.9
MS.gene068492.t1 MTR_3g082700 23.702 443 280 14 104 495 76 511 1.48e-12 70.5
MS.gene068492.t1 MTR_5g077590 45.783 83 45 0 410 492 304 386 1.68e-12 69.7
MS.gene068492.t1 MTR_1g069935 22.921 445 292 14 99 499 75 512 3.07e-12 69.3
MS.gene068492.t1 MTR_4g005090 25.397 441 248 19 106 497 80 488 6.54e-12 68.2
MS.gene068492.t1 MTR_4g064807 39.474 76 46 0 424 499 1 76 3.74e-11 59.7
MS.gene068492.t1 MTR_1g074930 23.881 469 295 16 104 519 75 534 4.72e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068492.t1 AT2G20780 70.857 525 141 4 5 525 7 523 0.0 750
MS.gene068492.t1 AT2G20780 73.756 442 114 1 84 525 26 465 0.0 668
MS.gene068492.t1 AT3G18830 48.178 494 236 5 47 524 31 520 1.12e-161 471
MS.gene068492.t1 AT2G16120 47.368 494 239 4 45 517 16 509 2.29e-157 458
MS.gene068492.t1 AT2G16130 47.358 492 236 4 45 513 16 507 1.62e-156 456
MS.gene068492.t1 AT4G36670 46.737 475 238 4 46 505 8 482 5.08e-151 442
MS.gene068492.t1 AT2G18480 47.589 477 236 4 40 502 7 483 1.92e-149 438
MS.gene068492.t1 AT2G43330 32.604 503 315 9 37 526 16 507 2.59e-71 236
MS.gene068492.t1 AT5G17010 29.622 503 312 9 21 499 15 499 4.20e-69 230
MS.gene068492.t1 AT5G17010 29.622 503 312 9 21 499 15 499 4.20e-69 230
MS.gene068492.t1 AT5G17010 29.622 503 312 9 21 499 15 499 4.20e-69 230
MS.gene068492.t1 AT5G16150 33.608 485 296 11 23 500 75 540 3.32e-67 226
MS.gene068492.t1 AT5G16150 33.608 485 296 11 23 500 75 540 3.32e-67 226
MS.gene068492.t1 AT5G16150 33.608 485 296 11 23 500 75 540 3.32e-67 226
MS.gene068492.t1 AT1G75220 30.785 497 308 10 17 503 17 487 1.04e-65 221
MS.gene068492.t1 AT5G59250 30.595 487 307 10 34 499 77 553 1.06e-63 218
MS.gene068492.t1 AT1G19450 30.426 516 318 13 1 503 1 488 1.51e-63 215
MS.gene068492.t1 AT3G05150 30.738 488 307 9 21 501 5 468 2.28e-63 214
MS.gene068492.t1 AT3G05150 30.738 488 307 9 21 501 5 468 2.28e-63 214
MS.gene068492.t1 AT3G05150 30.738 488 307 9 21 501 5 468 2.51e-63 214
MS.gene068492.t1 AT1G08930 29.839 496 310 10 22 505 25 494 1.18e-62 213
MS.gene068492.t1 AT1G08930 29.839 496 310 10 22 505 25 494 1.18e-62 213
MS.gene068492.t1 AT3G03090 29.746 511 310 12 21 499 6 499 3.79e-61 209
MS.gene068492.t1 AT3G05165 28.601 479 312 8 31 499 2 460 2.11e-60 206
MS.gene068492.t1 AT3G05165 28.601 479 312 8 31 499 2 460 2.11e-60 206
MS.gene068492.t1 AT3G05165 28.601 479 312 8 31 499 2 460 2.11e-60 206
MS.gene068492.t1 AT2G48020 31.195 452 279 8 54 499 33 458 5.50e-60 205
MS.gene068492.t1 AT2G48020 31.195 452 279 8 54 499 33 458 5.50e-60 205
MS.gene068492.t1 AT3G05160 28.723 470 299 9 40 499 8 451 5.05e-59 202
MS.gene068492.t1 AT5G18840 31.174 494 302 11 22 505 16 481 8.35e-59 202
MS.gene068492.t1 AT5G27350 29.873 472 293 12 43 500 15 462 1.05e-58 202
MS.gene068492.t1 AT5G27360 29.193 483 314 11 27 499 1 465 3.14e-58 201
MS.gene068492.t1 AT5G27360 29.193 483 314 11 27 499 49 513 1.77e-57 200
MS.gene068492.t1 AT1G54730 30.496 423 268 9 83 499 60 462 1.53e-56 196
MS.gene068492.t1 AT3G05155 29.936 471 281 11 45 499 18 455 4.20e-56 195
MS.gene068492.t1 AT4G04760 30.128 468 289 11 51 505 28 470 4.82e-56 195
MS.gene068492.t1 AT4G04760 31.019 432 265 9 85 505 2 411 2.10e-55 192
MS.gene068492.t1 AT3G05160 29.216 421 272 7 85 499 2 402 6.25e-55 190
MS.gene068492.t1 AT3G05160 29.216 421 272 7 85 499 2 402 6.25e-55 190
MS.gene068492.t1 AT5G26250 29.317 498 315 12 54 526 21 506 2.31e-54 191
MS.gene068492.t1 AT4G04750 28.599 514 321 14 14 505 29 518 1.07e-53 190
MS.gene068492.t1 AT4G04750 29.025 472 300 12 45 505 27 474 4.10e-53 187
MS.gene068492.t1 AT4G04750 29.025 472 300 12 45 505 27 474 4.10e-53 187
MS.gene068492.t1 AT3G19940 27.292 480 310 11 54 505 24 492 3.21e-52 186
MS.gene068492.t1 AT1G08900 30.404 421 271 8 83 499 11 413 6.88e-52 182
MS.gene068492.t1 AT1G50310 27.140 479 313 11 54 505 24 493 7.17e-52 185
MS.gene068492.t1 AT1G08900 30.404 421 271 8 83 499 45 447 1.27e-51 182
MS.gene068492.t1 AT1G08900 28.601 479 311 10 25 499 4 455 1.44e-51 182
MS.gene068492.t1 AT1G08900 28.601 479 311 10 25 499 4 455 1.44e-51 182
MS.gene068492.t1 AT4G04760 28.879 464 297 11 51 505 28 467 4.52e-51 182
MS.gene068492.t1 AT1G08890 29.677 465 295 11 45 499 15 457 5.11e-51 181
MS.gene068492.t1 AT1G77210 27.395 522 318 20 35 520 8 504 1.37e-50 181
MS.gene068492.t1 AT1G77210 27.395 522 318 20 35 520 8 504 1.37e-50 181
MS.gene068492.t1 AT3G05960 27.108 498 329 10 54 527 20 507 2.09e-50 181
MS.gene068492.t1 AT5G26340 26.800 500 325 10 55 525 24 511 4.22e-50 180
MS.gene068492.t1 AT1G08920 28.298 470 297 11 45 499 18 462 5.32e-49 176
MS.gene068492.t1 AT1G05030 30.159 441 295 7 62 500 86 515 5.94e-49 177
MS.gene068492.t1 AT1G30220 33.435 329 211 5 54 378 27 351 1.49e-48 177
MS.gene068492.t1 AT1G30220 45.833 96 52 0 410 505 464 559 1.39e-18 89.4
MS.gene068492.t1 AT3G05400 28.178 472 300 12 45 504 17 461 1.59e-48 174
MS.gene068492.t1 AT2G35740 32.353 340 211 7 54 382 25 356 6.00e-48 175
MS.gene068492.t1 AT2G35740 39.806 103 62 0 401 503 458 560 1.71e-17 86.3
MS.gene068492.t1 AT4G02050 25.610 492 326 9 41 505 13 491 6.75e-48 174
MS.gene068492.t1 AT4G02050 25.610 492 326 9 41 505 13 491 6.75e-48 174
MS.gene068492.t1 AT3G05165 28.571 427 270 8 40 456 17 418 6.91e-48 174
MS.gene068492.t1 AT3G05165 27.765 425 278 7 31 445 2 407 1.35e-47 172
MS.gene068492.t1 AT3G05165 27.765 425 278 7 31 445 2 407 1.35e-47 172
MS.gene068492.t1 AT1G67300 29.528 508 313 14 15 500 3 487 1.41e-47 172
MS.gene068492.t1 AT1G67300 29.528 508 313 14 15 500 3 487 1.41e-47 172
MS.gene068492.t1 AT4G16480 31.714 350 216 6 54 390 26 365 1.95e-47 174
MS.gene068492.t1 AT4G16480 36.066 122 70 1 401 514 459 580 2.36e-17 85.5
MS.gene068492.t1 AT4G16480 31.714 350 216 6 54 390 26 365 1.95e-47 174
MS.gene068492.t1 AT4G16480 36.066 122 70 1 401 514 459 580 2.36e-17 85.5
MS.gene068492.t1 AT4G16480 31.714 350 216 6 54 390 26 365 1.95e-47 174
MS.gene068492.t1 AT4G16480 36.066 122 70 1 401 514 459 580 2.36e-17 85.5
MS.gene068492.t1 AT1G54730 27.896 423 258 8 83 499 60 441 5.14e-47 170
MS.gene068492.t1 AT1G67300 29.666 509 312 15 15 500 3 488 6.31e-47 171
MS.gene068492.t1 AT1G08920 27.848 474 301 11 45 499 18 469 8.65e-47 170
MS.gene068492.t1 AT5G27360 31.081 370 233 9 134 499 10 361 1.44e-46 167
MS.gene068492.t1 AT5G27360 31.081 370 233 9 134 499 10 361 1.44e-46 167
MS.gene068492.t1 AT3G19930 26.680 491 315 12 51 511 20 495 6.02e-46 169
MS.gene068492.t1 AT3G19930 26.680 491 315 12 51 511 20 495 6.02e-46 169
MS.gene068492.t1 AT1G11260 25.200 500 329 12 54 517 22 512 9.20e-46 168
MS.gene068492.t1 AT1G54730 29.474 380 243 8 83 456 60 420 1.06e-45 166
MS.gene068492.t1 AT1G34580 27.181 493 310 13 51 509 21 498 1.91e-45 167
MS.gene068492.t1 AT5G23270 25.451 499 324 11 46 511 15 498 5.18e-45 166
MS.gene068492.t1 AT5G17010 27.236 492 246 11 40 499 25 436 2.52e-44 162
MS.gene068492.t1 AT1G05030 28.482 481 318 10 22 500 7 463 3.97e-44 162
MS.gene068492.t1 AT1G34580 27.896 423 278 9 101 509 39 448 6.45e-44 162
MS.gene068492.t1 AT1G07340 27.389 471 303 10 55 498 23 481 7.53e-44 162
MS.gene068492.t1 AT4G21480 26.653 484 308 13 54 505 22 490 4.88e-43 160
MS.gene068492.t1 AT3G05400 27.119 472 285 13 45 504 17 441 6.32e-43 159
MS.gene068492.t1 AT1G67300 29.797 443 266 15 20 440 8 427 1.71e-42 157
MS.gene068492.t1 AT1G67300 29.797 443 266 15 20 440 8 427 1.71e-42 157
MS.gene068492.t1 AT1G67300 29.464 448 271 14 15 440 3 427 2.72e-42 157
MS.gene068492.t1 AT1G67300 29.464 448 271 14 15 440 3 427 2.72e-42 157
MS.gene068492.t1 AT1G79820 29.274 468 296 12 45 500 44 488 1.81e-41 156
MS.gene068492.t1 AT1G79820 29.274 468 296 12 45 500 44 488 1.81e-41 156
MS.gene068492.t1 AT5G27360 27.251 422 280 10 27 438 1 405 3.70e-41 154
MS.gene068492.t1 AT3G20460 26.941 438 290 10 70 499 68 483 7.28e-41 154
MS.gene068492.t1 AT1G54730 29.261 352 224 8 83 428 60 392 7.29e-40 150
MS.gene068492.t1 AT1G54730 29.261 352 224 8 83 428 60 392 7.29e-40 150
MS.gene068492.t1 AT1G50310 27.666 347 235 9 166 505 13 350 1.50e-38 145
MS.gene068492.t1 AT1G08900 28.307 378 250 7 83 456 53 413 1.94e-38 146
MS.gene068492.t1 AT1G08920 26.588 425 277 9 45 456 18 420 2.25e-38 146
MS.gene068492.t1 AT1G54730 26.842 380 232 8 83 456 60 399 1.83e-36 140
MS.gene068492.t1 AT2G48020 28.291 357 228 6 54 404 33 367 2.02e-36 139
MS.gene068492.t1 AT5G61520 25.880 483 316 10 54 505 23 494 2.84e-36 141
MS.gene068492.t1 AT1G79820 28.814 413 265 10 45 448 44 436 3.08e-36 140
MS.gene068492.t1 AT2G48020 27.964 329 215 4 54 382 33 339 1.89e-35 136
MS.gene068492.t1 AT1G77210 27.493 371 228 14 167 520 9 355 4.06e-35 135
MS.gene068492.t1 AT3G05155 28.657 335 205 7 45 372 18 325 4.48e-35 134
MS.gene068492.t1 AT3G51490 36.864 236 144 5 53 285 2 235 7.10e-35 139
MS.gene068492.t1 AT3G51490 29.870 231 137 5 284 502 495 712 5.37e-19 91.3
MS.gene068492.t1 AT3G51490 36.864 236 144 5 53 285 2 235 7.50e-35 139
MS.gene068492.t1 AT3G51490 32.900 231 138 5 284 502 495 720 8.04e-22 100
MS.gene068492.t1 AT1G54730 28.947 304 196 6 69 372 50 333 6.51e-34 131
MS.gene068492.t1 AT5G61520 26.341 410 287 6 101 505 47 446 1.74e-33 133
MS.gene068492.t1 AT1G20840 36.449 214 124 5 59 266 8 215 6.04e-31 127
MS.gene068492.t1 AT1G20840 32.314 229 136 5 287 502 497 719 6.47e-22 100
MS.gene068492.t1 AT1G20840 36.449 214 124 5 59 266 8 215 6.04e-31 127
MS.gene068492.t1 AT1G20840 32.314 229 136 5 287 502 497 719 6.47e-22 100
MS.gene068492.t1 AT1G54730 26.420 352 213 8 83 428 60 371 9.42e-31 124
MS.gene068492.t1 AT1G54730 27.757 263 178 3 83 345 60 310 6.82e-30 120
MS.gene068492.t1 AT1G54730 27.757 263 178 3 83 345 60 310 6.82e-30 120
MS.gene068492.t1 AT3G51490 39.080 174 103 3 113 285 14 185 7.32e-27 115
MS.gene068492.t1 AT3G51490 32.900 231 138 5 284 502 445 670 1.06e-21 99.4
MS.gene068492.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.16e-26 115
MS.gene068492.t1 AT4G35300 32.751 229 133 6 288 502 495 716 1.42e-24 108
MS.gene068492.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.16e-26 115
MS.gene068492.t1 AT4G35300 32.751 229 133 6 288 502 495 716 1.42e-24 108
MS.gene068492.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.16e-26 115
MS.gene068492.t1 AT4G35300 32.751 229 133 6 288 502 495 716 1.42e-24 108
MS.gene068492.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.17e-26 115
MS.gene068492.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.46e-24 108
MS.gene068492.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.17e-26 115
MS.gene068492.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.46e-24 108
MS.gene068492.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.17e-26 115
MS.gene068492.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.46e-24 108
MS.gene068492.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.17e-26 115
MS.gene068492.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.46e-24 108
MS.gene068492.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.17e-26 115
MS.gene068492.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.46e-24 108
MS.gene068492.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.17e-26 115
MS.gene068492.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.46e-24 108
MS.gene068492.t1 AT4G35300 38.308 201 116 6 66 260 15 213 1.17e-26 115
MS.gene068492.t1 AT4G35300 32.751 229 133 6 288 502 505 726 1.46e-24 108
MS.gene068492.t1 AT1G79820 26.068 468 263 13 45 500 44 440 1.46e-25 109
MS.gene068492.t1 AT4G35300 32.751 229 133 6 288 502 308 529 5.70e-25 108
MS.gene068492.t1 AT5G43350 22.538 457 295 14 104 509 76 524 4.56e-14 75.1
MS.gene068492.t1 AT5G43340 22.581 434 296 13 105 505 82 508 6.86e-13 71.6
MS.gene068492.t1 AT2G38940 21.670 443 291 11 105 499 81 515 2.23e-12 69.7
MS.gene068492.t1 AT1G16370 25.450 444 262 20 91 510 116 514 1.13e-11 67.8
MS.gene068492.t1 AT3G54700 22.768 448 294 13 105 509 81 519 1.31e-11 67.4
MS.gene068492.t1 AT3G54700 22.768 448 294 13 105 509 81 519 1.31e-11 67.4
MS.gene068492.t1 AT1G79820 37.748 151 80 5 357 500 235 378 6.28e-11 64.7
MS.gene068492.t1 AT3G20660 26.049 453 268 26 85 518 120 524 7.44e-11 65.1

Find 127 sgRNAs with CRISPR-Local

Find 150 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGCGGCCATTAAAATTTC+TGG 0.104258 4.2:-58297589 None:intergenic
ACTCTTTCATTATTTGAAAA+AGG 0.138285 4.2:+58297775 MS.gene068492:CDS
AACAAAGACCGTCTTTATTT+TGG 0.219339 4.2:+58297660 MS.gene068492:CDS
TGTATCTCTATTGGGTAGTT+TGG 0.222757 4.2:+58296922 MS.gene068492:CDS
AAGGCCGGAAAACGCGTAAT+TGG 0.248896 4.2:-58297212 None:intergenic
TTGGACTCGGCCCTGTGTGC+TGG 0.254548 4.2:+58297857 MS.gene068492:CDS
TCTCTCAACAATGTTCTTCT+TGG 0.260513 4.2:+58296571 MS.gene068492:CDS
GACTGCTTGTTTGTTCTGTA+TGG 0.272711 4.2:+58297747 MS.gene068492:CDS
TTCTACCTACTTTATCAATA+AGG 0.275599 4.2:-58297693 None:intergenic
GCTGGAATTGGAATAGGTTT+TGG 0.278916 4.2:+58297076 MS.gene068492:CDS
TTTGAGTATTGTATCTCTAT+TGG 0.289099 4.2:+58296913 MS.gene068492:CDS
CAGATATTATTGGTAGAAAA+TGG 0.294464 4.2:+58296960 MS.gene068492:CDS
TCTTATCTTCCAATTGTTGT+TGG 0.306828 4.2:-58296504 None:intergenic
AAGATGATGTTCCAAGAAAA+TGG 0.307041 4.2:+58296382 None:intergenic
GTATCTCTATTGGGTAGTTT+GGG 0.319309 4.2:+58296923 MS.gene068492:CDS
CTTCTCATTACTAGCACAAT+TGG 0.327974 4.2:+58297721 MS.gene068492:CDS
AATGGGGAAATGGGTTTATC+TGG 0.330407 4.2:+58296406 MS.gene068492:CDS
GTACTTGTTCTTTGTTCCTA+AGG 0.334633 4.2:-58296434 None:intergenic
GGAAGATTGTTAGCTGGAAT+TGG 0.335016 4.2:+58297064 MS.gene068492:CDS
CTTCGCCGGATGCTGATTAC+TGG 0.337252 4.2:+58297508 MS.gene068492:CDS
CCGATCTTGCTTCGTCAATT+CGG 0.337686 4.2:-58297348 None:intergenic
TTGAGTATTGTATCTCTATT+GGG 0.346213 4.2:+58296914 MS.gene068492:CDS
TTGTTAGCTGGAATTGGAAT+AGG 0.355045 4.2:+58297070 MS.gene068492:CDS
AGAAAATGGTAATGGGGAAA+TGG 0.358662 4.2:+58296396 MS.gene068492:CDS
CAACTTGTGCAGAACAAAAC+TGG 0.362425 4.2:+58298171 MS.gene068492:CDS
TCATTGTAATTCCACCCATT+TGG 0.368460 4.2:-58297009 None:intergenic
TCTAAAGATAACTGAGGTTC+AGG 0.370786 4.2:+58296871 MS.gene068492:CDS
GTCCTCGTATTTACCAGAAT+TGG 0.372355 4.2:-58297446 None:intergenic
GTATCCAACGCAATTTCTTT+CGG 0.383566 4.2:+58297988 MS.gene068492:CDS
TGAGAATGAACATGGGAGTC+AGG 0.384972 4.2:+58298119 MS.gene068492:CDS
TGTTCCAAGAAAATGGTAAT+GGG 0.389476 4.2:+58296389 MS.gene068492:CDS
GGGCCCTTAGTGATTGCATT+AGG 0.398235 4.2:+58297796 MS.gene068492:CDS
CACTCGGAGCTGTAGCGAAT+AGG 0.400992 4.2:+58297929 MS.gene068492:CDS
ACTGCTTGTTTGTTCTGTAT+GGG 0.403559 4.2:+58297748 MS.gene068492:CDS
ATCATTAGTACTTGATATGA+AGG 0.422297 4.2:-58297040 None:intergenic
GAAAATGGTAATGGGGAAAT+GGG 0.424079 4.2:+58296397 MS.gene068492:CDS
TGGACTCGGCCCTGTGTGCT+GGG 0.428193 4.2:+58297858 MS.gene068492:CDS
GATATCTCAGCAATATATAT+AGG 0.430921 4.2:-58297112 None:intergenic
CTCCGCCACCGGCACTTCGC+CGG 0.433846 4.2:+58297494 MS.gene068492:CDS
GGAAGAACATCAGATATTAT+TGG 0.433859 4.2:+58296950 MS.gene068492:CDS
TACTTGTTCTTTGTTCCTAA+GGG 0.434909 4.2:-58296433 None:intergenic
AACAATGTTCTTCTTGGCTA+TGG 0.435667 4.2:+58296577 MS.gene068492:CDS
GGTTTATCTGGAATTCCCTT+AGG 0.446327 4.2:+58296418 MS.gene068492:CDS
ACACTAGTACCTGAAACAAA+AGG 0.446951 4.2:+58298066 MS.gene068492:CDS
GGCTGCAGTTGTATTCCAAA+TGG 0.451381 4.2:+58296994 MS.gene068492:CDS
CGGATGCTGATTACTGGTCT+TGG 0.455359 4.2:+58297514 MS.gene068492:CDS
GCCTGAGCACGCACTCGTAA+AGG 0.455930 4.2:-58297901 None:intergenic
GCCTTTCGGTACACATAAGT+TGG 0.456022 4.2:+58297230 MS.gene068492:CDS
AACAACAATTGGAAGATAAG+AGG 0.456265 4.2:+58296506 MS.gene068492:CDS
AGTGAGCCTCTAGTGAGATT+TGG 0.456475 4.2:-58297136 None:intergenic
ACTCGGAGCTGTAGCGAATA+GGG 0.461405 4.2:+58297930 MS.gene068492:CDS
CCCTTTACGAGTGCGTGCTC+AGG 0.461504 4.2:+58297900 MS.gene068492:CDS
TTCTCATTACTAGCACAATT+GGG 0.462959 4.2:+58297722 MS.gene068492:CDS
CGTGCTCAGGCATCTGCACT+CGG 0.465823 4.2:+58297913 MS.gene068492:CDS
TCATATCAAGTACTAATGAT+TGG 0.466636 4.2:+58297043 MS.gene068492:CDS
CCGAATTGACGAAGCAAGAT+CGG 0.470119 4.2:+58297348 MS.gene068492:CDS
ATGTTCCAAGAAAATGGTAA+TGG 0.470800 4.2:+58296388 MS.gene068492:CDS
AAGATAAGAGGAACAGTACT+AGG 0.471084 4.2:+58296518 MS.gene068492:CDS
ATCAGCATCCGGCGAAGTGC+CGG 0.474492 4.2:-58297502 None:intergenic
AATACCTAATGCAATCACTA+AGG 0.478312 4.2:-58297800 None:intergenic
CTGCTTGTTTGTTCTGTATG+GGG 0.479869 4.2:+58297749 MS.gene068492:CDS
ATTGTCCTTATTGATAAAGT+AGG 0.479964 4.2:+58297688 MS.gene068492:CDS
CCTGAGCACGCACTCGTAAA+GGG 0.483401 4.2:-58297900 None:intergenic
CTATTGGGTAGTTTGGGTGG+TGG 0.488972 4.2:+58296929 MS.gene068492:CDS
TGAAACAAAAGGGAAGTCAT+TGG 0.496609 4.2:+58298077 MS.gene068492:CDS
ATCCGGCGAAGTGCCGGTGG+CGG 0.497536 4.2:-58297496 None:intergenic
GAGGCTAGCAGAAATACAAC+AGG 0.497842 4.2:+58297411 MS.gene068492:CDS
CACTAGTACCTGAAACAAAA+GGG 0.508537 4.2:+58298067 MS.gene068492:CDS
AAACGAAGACGAGAAAGAAG+TGG 0.520687 4.2:+58297384 MS.gene068492:CDS
CAAGACCAGTAATCAGCATC+CGG 0.526849 4.2:-58297513 None:intergenic
ATGATTGGAAGATTGTTAGC+TGG 0.528824 4.2:+58297058 MS.gene068492:CDS
ACTTATGTGTACCGAAAGGC+CGG 0.528846 4.2:-58297227 None:intergenic
ATAAATGTAGGAATTATGCT+TGG 0.533082 4.2:+58297181 MS.gene068492:CDS
CCAACGCAATTTCTTTCGGC+GGG 0.535097 4.2:+58297992 MS.gene068492:CDS
GACGGTCTTTGTTATACCTA+CGG 0.535206 4.2:-58297650 None:intergenic
CAGGGAAAAGAGATGGAGCT+AGG 0.539460 4.2:+58298138 MS.gene068492:CDS
TGCTTGTTTGTTCTGTATGG+GGG 0.543348 4.2:+58297750 MS.gene068492:CDS
GCTGCAGTTGTATTCCAAAT+GGG 0.552850 4.2:+58296995 MS.gene068492:CDS
ACCAACCATCTCGGCGACTC+AGG 0.557547 4.2:-58297316 None:intergenic
TCTCTATTGGGTAGTTTGGG+TGG 0.559075 4.2:+58296926 MS.gene068492:CDS
GCAGAAATACAACAGGCTGC+TGG 0.560147 4.2:+58297418 MS.gene068492:CDS
CAATTGTGCTAGTAATGAGA+AGG 0.568147 4.2:-58297720 None:intergenic
TCATTAGTACTTGATATGAA+GGG 0.569168 4.2:-58297039 None:intergenic
TGAATTGCTCTCTCCGCCAC+CGG 0.570461 4.2:+58297483 MS.gene068492:CDS
TCCTGAGTCGCCGAGATGGT+TGG 0.572336 4.2:+58297315 MS.gene068492:CDS
TGGGAGTCAGGGAAAAGAGA+TGG 0.575169 4.2:+58298131 MS.gene068492:CDS
GAGAATGAACATGGGAGTCA+GGG 0.577348 4.2:+58298120 MS.gene068492:CDS
TGGAGAGTAATGCTTGCTGT+TGG 0.577364 4.2:+58297250 MS.gene068492:CDS
GAACAAAGAACAAGTACAAG+AGG 0.581349 4.2:+58296440 MS.gene068492:CDS
AGCATCCGGCGAAGTGCCGG+TGG 0.584485 4.2:-58297499 None:intergenic
AGAGAGCAATTCACGCCACA+CGG 0.586023 4.2:-58297473 None:intergenic
TTCTGCATTACCAACCATCT+CGG 0.587579 4.2:-58297325 None:intergenic
AAATTGCGTTGGATACAGAC+AGG 0.590532 4.2:-58297981 None:intergenic
TAGAAAATGGACAATGGCAT+TGG 0.591364 4.2:+58296973 MS.gene068492:CDS
ACAGGAAAGACATGGCTACA+AGG 0.594862 4.2:-58297963 None:intergenic
AATTGTGCTAGTAATGAGAA+GGG 0.597166 4.2:-58297719 None:intergenic
GCAGATGTGGGTGTGATGAG+TGG 0.598876 4.2:+58296824 MS.gene068492:intron
TTATTCCTGAGTCGCCGAGA+TGG 0.599472 4.2:+58297311 MS.gene068492:CDS
CCCGCCGAAAGAAATTGCGT+TGG 0.604005 4.2:-58297992 None:intergenic
ATACCTAATGCAATCACTAA+GGG 0.608156 4.2:-58297799 None:intergenic
TACTTTATCAATAAGGACAA+TGG 0.612652 4.2:-58297686 None:intergenic
ATGATGTTTGAGAATGAACA+TGG 0.614564 4.2:+58298111 MS.gene068492:CDS
TCCAACGCAATTTCTTTCGG+CGG 0.616866 4.2:+58297991 MS.gene068492:CDS
ACGAGAAAGAAGTGGAAGAG+AGG 0.619835 4.2:+58297392 MS.gene068492:CDS
CATTAGTACTTGATATGAAG+GGG 0.622524 4.2:-58297038 None:intergenic
GCAAAACCAATGAACACTGA+AGG 0.623428 4.2:-58297280 None:intergenic
TGATTTATCTTCAATTCCAG+CGG 0.623893 4.2:-58297605 None:intergenic
GATGTCAAAACCCAGCACAC+AGG 0.624176 4.2:-58297868 None:intergenic
TGAAAACAAAGACAATGGCA+AGG 0.625343 4.2:-58298044 None:intergenic
GTTCCAAGAAAATGGTAATG+GGG 0.628643 4.2:+58296390 MS.gene068492:CDS
ATGTCAAAACCCAGCACACA+GGG 0.635080 4.2:-58297867 None:intergenic
GCAGTTGTATTCCAAATGGG+TGG 0.636411 4.2:+58296998 MS.gene068492:CDS
TGCCAATTCTGGTAAATACG+AGG 0.640126 4.2:+58297444 MS.gene068492:CDS
ATATCACCAAATCTCACTAG+AGG 0.642480 4.2:+58297130 MS.gene068492:CDS
CTAGCTGCTACTGTTGCCGT+AGG 0.648188 4.2:+58297634 MS.gene068492:CDS
TATTGGTAGAAAATGGACAA+TGG 0.649056 4.2:+58296967 MS.gene068492:CDS
GAGAGCAATTCACGCCACAC+GGG 0.655886 4.2:-58297472 None:intergenic
TAGTGTGAAAACAAAGACAA+TGG 0.657278 4.2:-58298049 None:intergenic
GAAAACAAAGACAATGGCAA+GGG 0.658409 4.2:-58298043 None:intergenic
ATTGTGCTAGTAATGAGAAG+GGG 0.672038 4.2:-58297718 None:intergenic
TCCAACTTATGTGTACCGAA+AGG 0.681195 4.2:-58297231 None:intergenic
AATGGCGACCAAAATAAAGA+CGG 0.682280 4.2:-58297668 None:intergenic
GTAGCGAATAGGGTTTGCAG+CGG 0.685373 4.2:+58297940 MS.gene068492:CDS
AGAAGATCTAAAGATAACTG+AGG 0.686492 4.2:+58296865 MS.gene068492:CDS
GGATACAGACAGGAAAGACA+TGG 0.687845 4.2:-58297971 None:intergenic
TGATGTTTGAGAATGAACAT+GGG 0.695121 4.2:+58298112 MS.gene068492:CDS
AATACGAGGACAAACCCGTG+TGG 0.757333 4.2:+58297458 MS.gene068492:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTGAGATGATTTTTA+CGG + chr4.2:58296779-58296798 MS.gene068492:intron 15.0%
!! ACTCTTTCATTATTTGAAAA+AGG + chr4.2:58297775-58297794 MS.gene068492:CDS 20.0%
!! CTCTTTCATTATTTGAAAAA+GGG + chr4.2:58297776-58297795 MS.gene068492:CDS 20.0%
!!! GTGTATGTGTTATTAATTAT+GGG + chr4.2:58296754-58296773 MS.gene068492:intron 20.0%
!!! TGTGTATGTGTTATTAATTA+TGG + chr4.2:58296753-58296772 MS.gene068492:intron 20.0%
!!! TTTATTGAGATGATTTTTAC+GGG + chr4.2:58296780-58296799 MS.gene068492:intron 20.0%
! ATAAATGTAGGAATTATGCT+TGG + chr4.2:58297181-58297200 MS.gene068492:CDS 25.0%
! ATCATTAGTACTTGATATGA+AGG - chr4.2:58297043-58297062 None:intergenic 25.0%
! ATTGTCCTTATTGATAAAGT+AGG + chr4.2:58297688-58297707 MS.gene068492:CDS 25.0%
! CAGATATTATTGGTAGAAAA+TGG + chr4.2:58296960-58296979 MS.gene068492:CDS 25.0%
! CCTACATTTATAAAAATCTC+TGG - chr4.2:58297172-58297191 None:intergenic 25.0%
! GATATCTCAGCAATATATAT+AGG - chr4.2:58297115-58297134 None:intergenic 25.0%
! TACTTTATCAATAAGGACAA+TGG - chr4.2:58297689-58297708 None:intergenic 25.0%
! TCATATCAAGTACTAATGAT+TGG + chr4.2:58297043-58297062 MS.gene068492:CDS 25.0%
! TCATTAGTACTTGATATGAA+GGG - chr4.2:58297042-58297061 None:intergenic 25.0%
! TTCTACCTACTTTATCAATA+AGG - chr4.2:58297696-58297715 None:intergenic 25.0%
!! CCAGAGATTTTTATAAATGT+AGG + chr4.2:58297169-58297188 MS.gene068492:CDS 25.0%
!! TTACAGTCCAGAAATTTTAA+TGG + chr4.2:58297582-58297601 MS.gene068492:CDS 25.0%
!! TTGAGTATTGTATCTCTATT+GGG + chr4.2:58296914-58296933 MS.gene068492:CDS 25.0%
!! TTTGAGTATTGTATCTCTAT+TGG + chr4.2:58296913-58296932 MS.gene068492:CDS 25.0%
!!! TGGAAATGTAGCATTTTTTT+CGG + chr4.2:58297834-58297853 MS.gene068492:CDS 25.0%
AACAACAATTGGAAGATAAG+AGG + chr4.2:58296506-58296525 MS.gene068492:CDS 30.0%
AATACCTAATGCAATCACTA+AGG - chr4.2:58297803-58297822 None:intergenic 30.0%
AATTGTGCTAGTAATGAGAA+GGG - chr4.2:58297722-58297741 None:intergenic 30.0%
AGAAGATCTAAAGATAACTG+AGG + chr4.2:58296865-58296884 MS.gene068492:CDS 30.0%
ATACCTAATGCAATCACTAA+GGG - chr4.2:58297802-58297821 None:intergenic 30.0%
ATGATGTTTGAGAATGAACA+TGG + chr4.2:58298111-58298130 MS.gene068492:CDS 30.0%
ATGTTCCAAGAAAATGGTAA+TGG + chr4.2:58296388-58296407 MS.gene068492:CDS 30.0%
CATTAGTACTTGATATGAAG+GGG - chr4.2:58297041-58297060 None:intergenic 30.0%
GGAAGAACATCAGATATTAT+TGG + chr4.2:58296950-58296969 MS.gene068492:CDS 30.0%
TACTTGTTCTTTGTTCCTAA+GGG - chr4.2:58296436-58296455 None:intergenic 30.0%
TAGTGTGAAAACAAAGACAA+TGG - chr4.2:58298052-58298071 None:intergenic 30.0%
TATTGGTAGAAAATGGACAA+TGG + chr4.2:58296967-58296986 MS.gene068492:CDS 30.0%
TCTTATCTTCCAATTGTTGT+TGG - chr4.2:58296507-58296526 None:intergenic 30.0%
TGATGTTTGAGAATGAACAT+GGG + chr4.2:58298112-58298131 MS.gene068492:CDS 30.0%
TGATTTATCTTCAATTCCAG+CGG - chr4.2:58297608-58297627 None:intergenic 30.0%
TGTTCCAAGAAAATGGTAAT+GGG + chr4.2:58296389-58296408 MS.gene068492:CDS 30.0%
TTCTCATTACTAGCACAATT+GGG + chr4.2:58297722-58297741 MS.gene068492:CDS 30.0%
! TTAGGTATTCTTTTTGTCTG+TGG + chr4.2:58297814-58297833 MS.gene068492:CDS 30.0%
! TTGTGAATTTTTGCAGATGT+GGG + chr4.2:58296812-58296831 MS.gene068492:intron 30.0%
! TTTGTGAATTTTTGCAGATG+TGG + chr4.2:58296811-58296830 MS.gene068492:intron 30.0%
!! AACAAAGACCGTCTTTATTT+TGG + chr4.2:58297660-58297679 MS.gene068492:CDS 30.0%
!! GTTCAGGTAGAAATTTTGAT+TGG + chr4.2:58296887-58296906 MS.gene068492:CDS 30.0%
!!! AATGTAGCATTTTTTTCGGT+TGG + chr4.2:58297838-58297857 MS.gene068492:CDS 30.0%
AACAATGTTCTTCTTGGCTA+TGG + chr4.2:58296577-58296596 MS.gene068492:CDS 35.0%
AAGATAAGAGGAACAGTACT+AGG + chr4.2:58296518-58296537 MS.gene068492:CDS 35.0%
AATGGCGACCAAAATAAAGA+CGG - chr4.2:58297671-58297690 None:intergenic 35.0%
ACACTAGTACCTGAAACAAA+AGG + chr4.2:58298066-58298085 MS.gene068492:CDS 35.0%
ACTGCTTGTTTGTTCTGTAT+GGG + chr4.2:58297748-58297767 MS.gene068492:CDS 35.0%
ATATCACCAAATCTCACTAG+AGG + chr4.2:58297130-58297149 MS.gene068492:CDS 35.0%
ATGATTGGAAGATTGTTAGC+TGG + chr4.2:58297058-58297077 MS.gene068492:CDS 35.0%
ATTGTGCTAGTAATGAGAAG+GGG - chr4.2:58297721-58297740 None:intergenic 35.0%
CAATTGTGCTAGTAATGAGA+AGG - chr4.2:58297723-58297742 None:intergenic 35.0%
CACTAGTACCTGAAACAAAA+GGG + chr4.2:58298067-58298086 MS.gene068492:CDS 35.0%
CTTCTCATTACTAGCACAAT+TGG + chr4.2:58297721-58297740 MS.gene068492:CDS 35.0%
GAAAACAAAGACAATGGCAA+GGG - chr4.2:58298046-58298065 None:intergenic 35.0%
GAACAAAGAACAAGTACAAG+AGG + chr4.2:58296440-58296459 MS.gene068492:CDS 35.0%
GTACTTGTTCTTTGTTCCTA+AGG - chr4.2:58296437-58296456 None:intergenic 35.0%
GTATCCAACGCAATTTCTTT+CGG + chr4.2:58297988-58298007 MS.gene068492:CDS 35.0%
GTATCTCTATTGGGTAGTTT+GGG + chr4.2:58296923-58296942 MS.gene068492:CDS 35.0%
TAGAAAATGGACAATGGCAT+TGG + chr4.2:58296973-58296992 MS.gene068492:CDS 35.0%
TCATTGTAATTCCACCCATT+TGG - chr4.2:58297012-58297031 None:intergenic 35.0%
TCTAAAGATAACTGAGGTTC+AGG + chr4.2:58296871-58296890 MS.gene068492:CDS 35.0%
TCTCTCAACAATGTTCTTCT+TGG + chr4.2:58296571-58296590 MS.gene068492:CDS 35.0%
TGAAAACAAAGACAATGGCA+AGG - chr4.2:58298047-58298066 None:intergenic 35.0%
TGAAACAAAAGGGAAGTCAT+TGG + chr4.2:58298077-58298096 MS.gene068492:CDS 35.0%
TGTATCTCTATTGGGTAGTT+TGG + chr4.2:58296922-58296941 MS.gene068492:CDS 35.0%
TTGTTAGCTGGAATTGGAAT+AGG + chr4.2:58297070-58297089 MS.gene068492:CDS 35.0%
! ATTTTGCCTTCAGTGTTCAT+TGG + chr4.2:58297274-58297293 MS.gene068492:CDS 35.0%
! CAGTGTTTTCAACAAATCTC+TGG + chr4.2:58297541-58297560 MS.gene068492:CDS 35.0%
! GTTCCAAGAAAATGGTAATG+GGG + chr4.2:58296390-58296409 MS.gene068492:CDS 35.0%
! TGTTTTGCACCAACAACAAT+TGG + chr4.2:58296495-58296514 MS.gene068492:CDS 35.0%
! TTTCCCCATTACCATTTTCT+TGG - chr4.2:58296396-58296415 None:intergenic 35.0%
!! AATGACTTCCCTTTTGTTTC+AGG - chr4.2:58298078-58298097 None:intergenic 35.0%
!! AGAAAATGGTAATGGGGAAA+TGG + chr4.2:58296396-58296415 MS.gene068492:CDS 35.0%
!! GAAAATGGTAATGGGGAAAT+GGG + chr4.2:58296397-58296416 MS.gene068492:CDS 35.0%
AAACGAAGACGAGAAAGAAG+TGG + chr4.2:58297384-58297403 MS.gene068492:CDS 40.0%
AAATTGCGTTGGATACAGAC+AGG - chr4.2:58297984-58298003 None:intergenic 40.0%
CAACTTGTGCAGAACAAAAC+TGG + chr4.2:58298171-58298190 MS.gene068492:CDS 40.0%
CTGCTTGTTTGTTCTGTATG+GGG + chr4.2:58297749-58297768 MS.gene068492:CDS 40.0%
GACTGCTTGTTTGTTCTGTA+TGG + chr4.2:58297747-58297766 MS.gene068492:CDS 40.0%
GCAAAACCAATGAACACTGA+AGG - chr4.2:58297283-58297302 None:intergenic 40.0%
GCTGCAGTTGTATTCCAAAT+GGG + chr4.2:58296995-58297014 MS.gene068492:CDS 40.0%
GGAAGATTGTTAGCTGGAAT+TGG + chr4.2:58297064-58297083 MS.gene068492:CDS 40.0%
GTCCTCGTATTTACCAGAAT+TGG - chr4.2:58297449-58297468 None:intergenic 40.0%
TCCAACTTATGTGTACCGAA+AGG - chr4.2:58297234-58297253 None:intergenic 40.0%
TGCCAATTCTGGTAAATACG+AGG + chr4.2:58297444-58297463 MS.gene068492:CDS 40.0%
TGCTTGTTTGTTCTGTATGG+GGG + chr4.2:58297750-58297769 MS.gene068492:CDS 40.0%
TTCTGCATTACCAACCATCT+CGG - chr4.2:58297328-58297347 None:intergenic 40.0%
! AATGGGGAAATGGGTTTATC+TGG + chr4.2:58296406-58296425 MS.gene068492:CDS 40.0%
! GACGGTCTTTGTTATACCTA+CGG - chr4.2:58297653-58297672 None:intergenic 40.0%
! GCTGGAATTGGAATAGGTTT+TGG + chr4.2:58297076-58297095 MS.gene068492:CDS 40.0%
! GGTTTATCTGGAATTCCCTT+AGG + chr4.2:58296418-58296437 MS.gene068492:CDS 40.0%
! GTATCCAATTACGCGTTTTC+CGG + chr4.2:58297208-58297227 MS.gene068492:CDS 40.0%
!!! GCATTTTTTTCGGTTGGACT+CGG + chr4.2:58297844-58297863 MS.gene068492:CDS 40.0%
ACAGGAAAGACATGGCTACA+AGG - chr4.2:58297966-58297985 None:intergenic 45.0%
ACGAGAAAGAAGTGGAAGAG+AGG + chr4.2:58297392-58297411 MS.gene068492:CDS 45.0%
ACTTATGTGTACCGAAAGGC+CGG - chr4.2:58297230-58297249 None:intergenic 45.0%
AGTGAGCCTCTAGTGAGATT+TGG - chr4.2:58297139-58297158 None:intergenic 45.0%
ATGTCAAAACCCAGCACACA+GGG - chr4.2:58297870-58297889 None:intergenic 45.0%
CAAGACCAGTAATCAGCATC+CGG - chr4.2:58297516-58297535 None:intergenic 45.0%
CCAGCGGCCATTAAAATTTC+TGG - chr4.2:58297592-58297611 None:intergenic 45.0%
CCGAATTGACGAAGCAAGAT+CGG + chr4.2:58297348-58297367 MS.gene068492:CDS 45.0%
CCGATCTTGCTTCGTCAATT+CGG - chr4.2:58297351-58297370 None:intergenic 45.0%
GAGAATGAACATGGGAGTCA+GGG + chr4.2:58298120-58298139 MS.gene068492:CDS 45.0%
GAGGCTAGCAGAAATACAAC+AGG + chr4.2:58297411-58297430 MS.gene068492:CDS 45.0%
GCAGTTGTATTCCAAATGGG+TGG + chr4.2:58296998-58297017 MS.gene068492:CDS 45.0%
GCCTTTCGGTACACATAAGT+TGG + chr4.2:58297230-58297249 MS.gene068492:CDS 45.0%
GGATACAGACAGGAAAGACA+TGG - chr4.2:58297974-58297993 None:intergenic 45.0%
GGCTGCAGTTGTATTCCAAA+TGG + chr4.2:58296994-58297013 MS.gene068492:CDS 45.0%
TCCAACGCAATTTCTTTCGG+CGG + chr4.2:58297991-58298010 MS.gene068492:CDS 45.0%
TCTCTATTGGGTAGTTTGGG+TGG + chr4.2:58296926-58296945 MS.gene068492:CDS 45.0%
TGAGAATGAACATGGGAGTC+AGG + chr4.2:58298119-58298138 MS.gene068492:CDS 45.0%
!! CCAGAAATTTTAATGGCCGC+TGG + chr4.2:58297589-58297608 MS.gene068492:CDS 45.0%
!! TGGAGAGTAATGCTTGCTGT+TGG + chr4.2:58297250-58297269 MS.gene068492:CDS 45.0%
AAGGCCGGAAAACGCGTAAT+TGG - chr4.2:58297215-58297234 None:intergenic 50.0%
AATACGAGGACAAACCCGTG+TGG + chr4.2:58297458-58297477 MS.gene068492:CDS 50.0%
ACTCGGAGCTGTAGCGAATA+GGG + chr4.2:58297930-58297949 MS.gene068492:CDS 50.0%
AGAGAGCAATTCACGCCACA+CGG - chr4.2:58297476-58297495 None:intergenic 50.0%
CAGGGAAAAGAGATGGAGCT+AGG + chr4.2:58298138-58298157 MS.gene068492:CDS 50.0%
CCAACGCAATTTCTTTCGGC+GGG + chr4.2:58297992-58298011 MS.gene068492:CDS 50.0%
CTATTGGGTAGTTTGGGTGG+TGG + chr4.2:58296929-58296948 MS.gene068492:CDS 50.0%
GATGTCAAAACCCAGCACAC+AGG - chr4.2:58297871-58297890 None:intergenic 50.0%
GCAGAAATACAACAGGCTGC+TGG + chr4.2:58297418-58297437 MS.gene068492:CDS 50.0%
GGGCCCTTAGTGATTGCATT+AGG + chr4.2:58297796-58297815 MS.gene068492:CDS 50.0%
GTAGCGAATAGGGTTTGCAG+CGG + chr4.2:58297940-58297959 MS.gene068492:CDS 50.0%
TGGGAGTCAGGGAAAAGAGA+TGG + chr4.2:58298131-58298150 MS.gene068492:CDS 50.0%
TTATTCCTGAGTCGCCGAGA+TGG + chr4.2:58297311-58297330 MS.gene068492:CDS 50.0%
! CGGATGCTGATTACTGGTCT+TGG + chr4.2:58297514-58297533 MS.gene068492:CDS 50.0%
! TTACGCGTTTTCCGGCCTTT+CGG + chr4.2:58297216-58297235 MS.gene068492:CDS 50.0%
!!! GCTGCTGGTTTTGCCAATTC+TGG + chr4.2:58297433-58297452 MS.gene068492:CDS 50.0%
CACTCGGAGCTGTAGCGAAT+AGG + chr4.2:58297929-58297948 MS.gene068492:CDS 55.0%
CCCGCCGAAAGAAATTGCGT+TGG - chr4.2:58297995-58298014 None:intergenic 55.0%
CCTGAGCACGCACTCGTAAA+GGG - chr4.2:58297903-58297922 None:intergenic 55.0%
CTAGCTGCTACTGTTGCCGT+AGG + chr4.2:58297634-58297653 MS.gene068492:CDS 55.0%
GAGAGCAATTCACGCCACAC+GGG - chr4.2:58297475-58297494 None:intergenic 55.0%
GCAGATGTGGGTGTGATGAG+TGG + chr4.2:58296824-58296843 MS.gene068492:intron 55.0%
TGAATTGCTCTCTCCGCCAC+CGG + chr4.2:58297483-58297502 MS.gene068492:CDS 55.0%
! CTTCGCCGGATGCTGATTAC+TGG + chr4.2:58297508-58297527 MS.gene068492:CDS 55.0%
ACCAACCATCTCGGCGACTC+AGG - chr4.2:58297319-58297338 None:intergenic 60.0%
ATCAGCATCCGGCGAAGTGC+CGG - chr4.2:58297505-58297524 None:intergenic 60.0%
CCCTTTACGAGTGCGTGCTC+AGG + chr4.2:58297900-58297919 MS.gene068492:CDS 60.0%
CGTGCTCAGGCATCTGCACT+CGG + chr4.2:58297913-58297932 MS.gene068492:CDS 60.0%
GCCTGAGCACGCACTCGTAA+AGG - chr4.2:58297904-58297923 None:intergenic 60.0%
TCCTGAGTCGCCGAGATGGT+TGG + chr4.2:58297315-58297334 MS.gene068492:CDS 60.0%
TGGACTCGGCCCTGTGTGCT+GGG + chr4.2:58297858-58297877 MS.gene068492:CDS 65.0%
TTGGACTCGGCCCTGTGTGC+TGG + chr4.2:58297857-58297876 MS.gene068492:CDS 65.0%
!! AGCATCCGGCGAAGTGCCGG+TGG - chr4.2:58297502-58297521 None:intergenic 70.0%
!! ATCCGGCGAAGTGCCGGTGG+CGG - chr4.2:58297499-58297518 None:intergenic 70.0%
CTCCGCCACCGGCACTTCGC+CGG + chr4.2:58297494-58297513 MS.gene068492:CDS 75.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 58296385 58298206 58296385 ID=MS.gene068492
chr4.2 mRNA 58296385 58298206 58296385 ID=MS.gene068492.t1;Parent=MS.gene068492
chr4.2 exon 58296385 58296598 58296385 ID=MS.gene068492.t1.exon1;Parent=MS.gene068492.t1
chr4.2 CDS 58296385 58296598 58296385 ID=cds.MS.gene068492.t1;Parent=MS.gene068492.t1
chr4.2 exon 58296828 58298206 58296828 ID=MS.gene068492.t1.exon2;Parent=MS.gene068492.t1
chr4.2 CDS 58296828 58298206 58296828 ID=cds.MS.gene068492.t1;Parent=MS.gene068492.t1
Gene Sequence

>MS.gene068492

ATGATGTTCCAAGAAAATGGTAATGGGGAAATGGGTTTATCTGGAATTCCCTTAGGAACAAAGAACAAGTACAAGAGGATGAATTCACAGCTTGTTGATGATAATGATGATGTTTTGCACCAACAACAATTGGAAGATAAGAGGAACAGTACTAGGAAATATGTTATTGCTTGTGCTATATTTGCTTCTCTCAACAATGTTCTTCTTGGCTATGGTATGCTTTCTTTGAAAAGTCTTTGACTTTGTTGATTTTTTGCGTTGACTTTGATTCTATTTAGATTGTTCTTGATGATCTACAATGATTTTGATTCATTTTTGCATTTCTAGTAGCTAAGATAATAACAGATCTAAAATAATAATTCATCAATTGTGTATGTGTTATTAATTATGGGAGTTTTATTGAGATGATTTTTACGGGATTTTTGTTTTGTGAATTTTTGCAGATGTGGGTGTGATGAGTGGTGCAGTTATATTTATCAAAGAAGATCTAAAGATAACTGAGGTTCAGGTAGAAATTTTGATTGGTATTTTGAGTATTGTATCTCTATTGGGTAGTTTGGGTGGTGGAAGAACATCAGATATTATTGGTAGAAAATGGACAATGGCATTGGCTGCAGTTGTATTCCAAATGGGTGGAATTACAATGACTCTTGCCCCTTCATATCAAGTACTAATGATTGGAAGATTGTTAGCTGGAATTGGAATAGGTTTTGGAGTTATGATTTCACCTATATATATTGCTGAGATATCACCAAATCTCACTAGAGGCTCACTTACTACTTTTCCAGAGATTTTTATAAATGTAGGAATTATGCTTGGTTATGTATCCAATTACGCGTTTTCCGGCCTTTCGGTACACATAAGTTGGAGAGTAATGCTTGCTGTTGGAATTTTGCCTTCAGTGTTCATTGGTTTTGCTCTTTTCATTATTCCTGAGTCGCCGAGATGGTTGGTAATGCAGAACCGAATTGACGAAGCAAGATCGGTGCTGTTGAAAACAAACGAAGACGAGAAAGAAGTGGAAGAGAGGCTAGCAGAAATACAACAGGCTGCTGGTTTTGCCAATTCTGGTAAATACGAGGACAAACCCGTGTGGCGTGAATTGCTCTCTCCGCCACCGGCACTTCGCCGGATGCTGATTACTGGTCTTGGAATTCAGTGTTTTCAACAAATCTCTGGAATTGATGCAACTGTGTATTACAGTCCAGAAATTTTAATGGCCGCTGGAATTGAAGATAAATCAAAACTTCTAGCTGCTACTGTTGCCGTAGGTATAACAAAGACCGTCTTTATTTTGGTCGCCATTGTCCTTATTGATAAAGTAGGTAGAAAACCCCTTCTCATTACTAGCACAATTGGGATGACTGCTTGTTTGTTCTGTATGGGGGTTACTCTTTCATTATTTGAAAAAGGGCCCTTAGTGATTGCATTAGGTATTCTTTTTGTCTGTGGAAATGTAGCATTTTTTTCGGTTGGACTCGGCCCTGTGTGCTGGGTTTTGACATCTGAAATCTTCCCTTTACGAGTGCGTGCTCAGGCATCTGCACTCGGAGCTGTAGCGAATAGGGTTTGCAGCGGCCTTGTAGCCATGTCTTTCCTGTCTGTATCCAACGCAATTTCTTTCGGCGGGACATTCTTTCTGTTTTCTGCTATTTCTGCCCTTGCCATTGTCTTTGTTTTCACACTAGTACCTGAAACAAAAGGGAAGTCATTGGAACAGATTGAGATGATGTTTGAGAATGAACATGGGAGTCAGGGAAAAGAGATGGAGCTAGGTGATGTTGAACAACTTGTGCAGAACAAAACTGGTTTAACAAAATAG

Protein sequence

>MS.gene068492.t1

MMFQENGNGEMGLSGIPLGTKNKYKRMNSQLVDDNDDVLHQQQLEDKRNSTRKYVIACAIFASLNNVLLGYDVGVMSGAVIFIKEDLKITEVQVEILIGILSIVSLLGSLGGGRTSDIIGRKWTMALAAVVFQMGGITMTLAPSYQVLMIGRLLAGIGIGFGVMISPIYIAEISPNLTRGSLTTFPEIFINVGIMLGYVSNYAFSGLSVHISWRVMLAVGILPSVFIGFALFIIPESPRWLVMQNRIDEARSVLLKTNEDEKEVEERLAEIQQAAGFANSGKYEDKPVWRELLSPPPALRRMLITGLGIQCFQQISGIDATVYYSPEILMAAGIEDKSKLLAATVAVGITKTVFILVAIVLIDKVGRKPLLITSTIGMTACLFCMGVTLSLFEKGPLVIALGILFVCGNVAFFSVGLGPVCWVLTSEIFPLRVRAQASALGAVANRVCSGLVAMSFLSVSNAISFGGTFFLFSAISALAIVFVFTLVPETKGKSLEQIEMMFENEHGSQGKEMELGDVEQLVQNKTGLTK