Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031564.t1 | XP_003607656.2 | 92.3 | 754 | 34 | 4 | 1 | 730 | 1 | 754 | 0.00E+00 | 1381.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031564.t1 | B5WWZ8 | 77.3 | 748 | 142 | 6 | 1 | 724 | 1 | 744 | 0.0e+00 | 1162.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031564.t1 | G7JDV8 | 92.3 | 754 | 34 | 4 | 1 | 730 | 1 | 754 | 0.0e+00 | 1381.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene82943 | MS.gene031564 | PPI |
| MS.gene82942 | MS.gene031564 | PPI |
| MS.gene72746 | MS.gene031564 | PPI |
| MS.gene72745 | MS.gene031564 | PPI |
| MS.gene82452 | MS.gene031564 | PPI |
| MS.gene86456 | MS.gene031564 | PPI |
| MS.gene83396 | MS.gene031564 | PPI |
| MS.gene056569 | MS.gene031564 | PPI |
| MS.gene067993 | MS.gene031564 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031564.t1 | MTR_4g080890 | 92.308 | 754 | 34 | 4 | 1 | 730 | 1 | 754 | 0.0 | 1368 |
| MS.gene031564.t1 | MTR_4g080823 | 88.579 | 753 | 62 | 4 | 1 | 729 | 10 | 762 | 0.0 | 1323 |
| MS.gene031564.t1 | MTR_0651s0010 | 90.812 | 653 | 36 | 4 | 1 | 629 | 1 | 653 | 0.0 | 1156 |
| MS.gene031564.t1 | MTR_7g097210 | 55.316 | 743 | 299 | 10 | 4 | 724 | 3 | 734 | 0.0 | 800 |
| MS.gene031564.t1 | MTR_1g075650 | 61.684 | 582 | 173 | 8 | 144 | 724 | 3 | 535 | 0.0 | 715 |
| MS.gene031564.t1 | MTR_7g097210 | 59.408 | 574 | 221 | 7 | 152 | 724 | 2 | 564 | 0.0 | 669 |
| MS.gene031564.t1 | MTR_5g025650 | 43.077 | 780 | 367 | 16 | 12 | 728 | 64 | 829 | 0.0 | 571 |
| MS.gene031564.t1 | MTR_8g072210 | 41.935 | 775 | 364 | 15 | 19 | 728 | 57 | 810 | 0.0 | 548 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031564.t1 | AT3G23410 | 57.959 | 735 | 274 | 4 | 22 | 727 | 15 | 743 | 0.0 | 844 |
| MS.gene031564.t1 | AT3G23410 | 61.004 | 677 | 255 | 3 | 54 | 727 | 5 | 675 | 0.0 | 833 |
| MS.gene031564.t1 | AT4G28570 | 55.256 | 742 | 307 | 5 | 2 | 724 | 7 | 742 | 0.0 | 814 |
| MS.gene031564.t1 | AT4G28570 | 55.256 | 742 | 307 | 5 | 2 | 724 | 7 | 742 | 0.0 | 814 |
| MS.gene031564.t1 | AT1G03990 | 49.404 | 755 | 340 | 11 | 7 | 729 | 13 | 757 | 0.0 | 728 |
| MS.gene031564.t1 | AT4G19380 | 42.364 | 753 | 374 | 16 | 18 | 728 | 34 | 768 | 0.0 | 536 |
| MS.gene031564.t1 | AT4G19380 | 42.608 | 744 | 367 | 16 | 27 | 728 | 1 | 726 | 5.64e-180 | 531 |
Find 142 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCCTTGTTTCTCTCCTTT+TGG | 0.180580 | 4.4:+30974365 | None:intergenic |
| TGATTCAAGAATACTTATTT+TGG | 0.221568 | 4.4:-30974684 | MS.gene031564:CDS |
| GAAGAAATGTTTGGGAGTTT+TGG | 0.228655 | 4.4:-30974231 | MS.gene031564:CDS |
| CAACTTCTCAAGCTTGTCTT+TGG | 0.272508 | 4.4:-30975324 | MS.gene031564:CDS |
| TGATTCCCTGGTGAATTTCT+TGG | 0.279412 | 4.4:+30974416 | None:intergenic |
| GCTTGAGAAGTTGCTGATAA+AGG | 0.301467 | 4.4:+30975334 | None:intergenic |
| ATGGACCAACAATATGAAAA+TGG | 0.302883 | 4.4:-30974725 | MS.gene031564:CDS |
| TATTGTGGTTCATGTGGTTA+TGG | 0.314221 | 4.4:-30974392 | MS.gene031564:CDS |
| TAAACGAATGCAATTCTAAA+AGG | 0.317923 | 4.4:+30975251 | None:intergenic |
| GAAGGTGCTGTTGATGAAAA+TGG | 0.336026 | 4.4:-30973066 | MS.gene031564:CDS |
| GTTGATTGAATAGTAATCAT+AGG | 0.337491 | 4.4:+30972973 | None:intergenic |
| CAACAGAAAGAAGAAATGTT+TGG | 0.349734 | 4.4:-30974240 | MS.gene031564:CDS |
| CATTGTTACCAGGTGAGAAT+TGG | 0.351996 | 4.4:-30973146 | MS.gene031564:CDS |
| GTTATGAAGTGTGCTGTTCT+TGG | 0.357460 | 4.4:+30973411 | None:intergenic |
| GCACTATATCCATGGGAATC+AGG | 0.366958 | 4.4:-30973465 | MS.gene031564:CDS |
| TTCTAGTGATGAATAATCTT+CGG | 0.371885 | 4.4:+30974757 | None:intergenic |
| AGAAAAGGGTGTCAAAATCT+TGG | 0.379576 | 4.4:-30974458 | MS.gene031564:CDS |
| TTGGGCACTTTCTTGATTTG+TGG | 0.380021 | 4.4:-30975383 | MS.gene031564:CDS |
| GTATACTTCTGCTCATCAAA+TGG | 0.389845 | 4.4:-30973118 | MS.gene031564:CDS |
| TTTGAAAATAGTTACAAGAA+TGG | 0.393141 | 4.4:-30974266 | MS.gene031564:CDS |
| TATACTTCTGCTCATCAAAT+GGG | 0.393187 | 4.4:-30973117 | MS.gene031564:CDS |
| TATCCAATGGCTTTCCATGC+TGG | 0.395200 | 4.4:+30975058 | None:intergenic |
| AACAGAAAGAAGAAATGTTT+GGG | 0.405430 | 4.4:-30974239 | MS.gene031564:CDS |
| CAAAATCAAGTATTAAGAAA+AGG | 0.411212 | 4.4:-30974473 | MS.gene031564:CDS |
| TCTAGTGATGAATAATCTTC+GGG | 0.422485 | 4.4:+30974758 | None:intergenic |
| TGTGGTTATGGTTGTCCAAA+AGG | 0.434505 | 4.4:-30974380 | MS.gene031564:CDS |
| CTTGAGAAGTTGCTGATAAA+GGG | 0.437565 | 4.4:+30975335 | None:intergenic |
| TTCAATTATTGCTCTTGTAT+CGG | 0.438986 | 4.4:+30973518 | None:intergenic |
| CTTGTAGATGCTGTTGAAAA+AGG | 0.445193 | 4.4:-30974329 | MS.gene031564:CDS |
| TTGATGATGATGGTACTCTA+TGG | 0.447920 | 4.4:+30973556 | None:intergenic |
| GTAATTGTTGGTTCTGGCTG+TGG | 0.452941 | 4.4:-30974857 | MS.gene031564:CDS |
| GTGGTGGTTCAGCTGTTAAT+TGG | 0.455365 | 4.4:-30974646 | MS.gene031564:CDS |
| TGGCTTCTAGCAACGAGGTT+GGG | 0.458420 | 4.4:-30975401 | MS.gene031564:CDS |
| TGCTATGCCTCAGTAAGAAA+TGG | 0.464395 | 4.4:-30975358 | MS.gene031564:CDS |
| AAAATCAAGTATTAAGAAAA+GGG | 0.465765 | 4.4:-30974472 | MS.gene031564:CDS |
| TCATATTGTTGGTCCATTGA+AGG | 0.466560 | 4.4:+30974731 | None:intergenic |
| AAAGGTGCTGTGATAATAAC+AGG | 0.471872 | 4.4:-30974311 | MS.gene031564:CDS |
| CATATTCAGCACTATATCCA+TGG | 0.471948 | 4.4:-30973473 | MS.gene031564:CDS |
| TATGTTTCCTTCACTGCCAA+TGG | 0.474427 | 4.4:-30976470 | MS.gene031564:CDS |
| GATGCGGTAATTGTTGGTTC+TGG | 0.474625 | 4.4:-30974863 | MS.gene031564:CDS |
| TCAAATGGGGAGTTGTAGAA+TGG | 0.477133 | 4.4:-30973103 | MS.gene031564:CDS |
| TTGCATTAAAACACCAGAAA+AGG | 0.481522 | 4.4:-30974618 | MS.gene031564:CDS |
| GTTGGTTCTGGCTGTGGAGG+AGG | 0.482681 | 4.4:-30974851 | MS.gene031564:CDS |
| GGTAACAATGCTCCTTCCAT+TGG | 0.483905 | 4.4:+30973159 | None:intergenic |
| CAGAAAAGGTGTTGAAAGAA+TGG | 0.485140 | 4.4:-30974604 | MS.gene031564:CDS |
| CTTGATTCATCATCATCCAT+TGG | 0.494921 | 4.4:+30976454 | None:intergenic |
| TGATGAAAATGGTGAGAGTT+GGG | 0.496388 | 4.4:-30973055 | MS.gene031564:CDS |
| CCTAACAGGTAAAGCGAATG+AGG | 0.496951 | 4.4:-30973598 | MS.gene031564:intron |
| CATAGAGTATCTATCTGCTA+TGG | 0.499902 | 4.4:-30974549 | MS.gene031564:CDS |
| GCAGGTTCAACAGTAGGTGG+TGG | 0.500248 | 4.4:-30974662 | MS.gene031564:CDS |
| AAATGTGATGCGGTAATTGT+TGG | 0.502713 | 4.4:-30974869 | MS.gene031564:CDS |
| TGGAGTCTAGTGTGGCATTG+AGG | 0.503710 | 4.4:+30974912 | None:intergenic |
| ATTGTTGGTTCTGGCTGTGG+AGG | 0.505457 | 4.4:-30974854 | MS.gene031564:CDS |
| GAAGATTATTCATCACTAGA+AGG | 0.507111 | 4.4:-30974755 | MS.gene031564:CDS |
| AAAGTGGTTGTTCTAGAGAA+AGG | 0.509206 | 4.4:-30974794 | MS.gene031564:CDS |
| GAATCATCATTTGATGATGA+TGG | 0.513986 | 4.4:+30973546 | None:intergenic |
| ATCACTAGAAGGTCCTTCAA+TGG | 0.515670 | 4.4:-30974744 | MS.gene031564:CDS |
| AGTGTGCTTCCAACTGCTGT+TGG | 0.516894 | 4.4:-30973003 | MS.gene031564:CDS |
| TAATGAGAACACTAGCGAAA+AGG | 0.517011 | 4.4:-30973211 | MS.gene031564:CDS |
| TGCTGAGATGTTAGCAAAGA+GGG | 0.518378 | 4.4:-30975462 | MS.gene031564:CDS |
| AGAAGAAAACAAAGAGGCAT+AGG | 0.523278 | 4.4:+30975219 | None:intergenic |
| AGAAGGAAAGAAAGATGAGA+AGG | 0.523803 | 4.4:-30976591 | None:intergenic |
| GCAGCAGGAGCAGTTGAAGT+AGG | 0.525512 | 4.4:-30973267 | MS.gene031564:CDS |
| CTGAGAATTCTAATAGCAGC+AGG | 0.529888 | 4.4:-30973282 | MS.gene031564:CDS |
| AATGAAAATTGTACACAAGA+AGG | 0.531263 | 4.4:-30974500 | MS.gene031564:CDS |
| TCATCATCCATTGGCAGTGA+AGG | 0.531597 | 4.4:+30976463 | None:intergenic |
| TTGATTGAATAGTAATCATA+GGG | 0.531890 | 4.4:+30972974 | None:intergenic |
| TGTTGATACTTCATATCCAA+TGG | 0.534466 | 4.4:+30975045 | None:intergenic |
| AATCCAGCATGGAAAGCCAT+TGG | 0.536851 | 4.4:-30975061 | MS.gene031564:CDS |
| ATAATTGAAACACCATTACT+AGG | 0.540718 | 4.4:-30973504 | MS.gene031564:CDS |
| TATAGATAGTGTTTATCCAA+TGG | 0.540962 | 4.4:-30973175 | MS.gene031564:CDS |
| ATGGCTTCTAGCAACGAGGT+TGG | 0.542866 | 4.4:-30975402 | MS.gene031564:CDS |
| TTGATGAAAATGGTGAGAGT+TGG | 0.551525 | 4.4:-30973056 | MS.gene031564:CDS |
| AAGAGAAAAGATTGTGCAGA+GGG | 0.551533 | 4.4:-30975297 | MS.gene031564:CDS |
| CAAATGGGGAGTTGTAGAAT+GGG | 0.552016 | 4.4:-30973102 | MS.gene031564:CDS |
| TTCATCCCGTGCTAATGACA+TGG | 0.554731 | 4.4:-30974067 | MS.gene031564:CDS |
| GGGTTAACACCAACAGCAGT+TGG | 0.556806 | 4.4:+30972994 | None:intergenic |
| GCTTCTGTCCTATCAAAAGC+TGG | 0.558239 | 4.4:-30974821 | MS.gene031564:CDS |
| GAACCACAATAATGATTCCC+TGG | 0.558303 | 4.4:+30974404 | None:intergenic |
| AAACCGCTAGAAATCATCAA+TGG | 0.561746 | 4.4:+30974122 | None:intergenic |
| AATCATTATTGTGGTTCATG+TGG | 0.563673 | 4.4:-30974398 | MS.gene031564:CDS |
| TATCCCCATGTCATTAGCAC+GGG | 0.567787 | 4.4:+30974062 | None:intergenic |
| GACAAAGAGAATATGAGAGC+TGG | 0.568725 | 4.4:-30973318 | MS.gene031564:CDS |
| GCAAAAGTAACAATTTCAGC+AGG | 0.569600 | 4.4:-30974164 | MS.gene031564:CDS |
| TTAGCACGGGATGAAGATGA+AGG | 0.570366 | 4.4:+30974075 | None:intergenic |
| TAGTCTAGTCCTGATTCCCA+TGG | 0.571034 | 4.4:+30973456 | None:intergenic |
| GGTGAGAGTTGGGAAGCTGA+AGG | 0.571561 | 4.4:-30973045 | MS.gene031564:CDS |
| GTGAGAGTTGGGAAGCTGAA+GGG | 0.574364 | 4.4:-30973044 | MS.gene031564:CDS |
| ATGGAAGGAGCATTGTTACC+AGG | 0.577349 | 4.4:-30973156 | MS.gene031564:CDS |
| GACCAACAATATGAAAATGG+AGG | 0.578079 | 4.4:-30974722 | MS.gene031564:CDS |
| TCATCCCGTGCTAATGACAT+GGG | 0.581174 | 4.4:-30974066 | MS.gene031564:CDS |
| GGGAGTGTCATCCATTGTTG+AGG | 0.581648 | 4.4:-30976570 | MS.gene031564:CDS |
| GAAACTGTTTGTGAGAGGAT+TGG | 0.583784 | 4.4:-30974527 | MS.gene031564:CDS |
| TCACCAGGGAATCATTATTG+TGG | 0.584122 | 4.4:-30974407 | MS.gene031564:CDS |
| TCTCTCACACCCCTCAACAA+TGG | 0.586246 | 4.4:+30976559 | None:intergenic |
| CGATTGAATTCAATTTGTAG+CGG | 0.586554 | 4.4:+30973340 | None:intergenic |
| AACAAGGGACTCAAGTTACA+TGG | 0.588903 | 4.4:-30974352 | MS.gene031564:CDS |
| GATAGTGTTTATCCAATGGA+AGG | 0.590334 | 4.4:-30973171 | MS.gene031564:CDS |
| TACAAATTCCAATTCTCACC+TGG | 0.591010 | 4.4:+30973138 | None:intergenic |
| TTGGCAGGTTCAACAGTAGG+TGG | 0.592216 | 4.4:-30974665 | MS.gene031564:CDS |
| GGAGTGTCATCCATTGTTGA+GGG | 0.596554 | 4.4:-30976569 | MS.gene031564:CDS |
| AAAGTAACAATTTCAGCAGG+TGG | 0.598692 | 4.4:-30974161 | MS.gene031564:CDS |
| TTCTTGAATCAATAGAAGCT+AGG | 0.600875 | 4.4:+30974696 | None:intergenic |
| GAAGGAAAGAAAGATGAGAA+GGG | 0.601594 | 4.4:-30976590 | None:intergenic |
| GTATCCCCATGTCATTAGCA+CGG | 0.602417 | 4.4:+30974061 | None:intergenic |
| ACCAACAATATGAAAATGGA+GGG | 0.602438 | 4.4:-30974721 | MS.gene031564:CDS |
| ATATTCAGCACTATATCCAT+GGG | 0.603766 | 4.4:-30973472 | MS.gene031564:CDS |
| CAACAATCTCTATCTAACAA+AGG | 0.604364 | 4.4:-30974935 | MS.gene031564:CDS |
| TTGGCGAAGACTTTAAGTAG+TGG | 0.611941 | 4.4:-30974212 | MS.gene031564:CDS |
| GGTGGACAAGTAACAACAGA+GGG | 0.615575 | 4.4:-30973369 | MS.gene031564:CDS |
| CTATGGAAACTGTTTGTGAG+AGG | 0.618097 | 4.4:-30974532 | MS.gene031564:CDS |
| TAAAGGGCCATTTCTTACTG+AGG | 0.621637 | 4.4:+30975351 | None:intergenic |
| TATAGTGCTGAATATGATGA+TGG | 0.622796 | 4.4:+30973480 | None:intergenic |
| TGTCCAAAAGGAGAGAAACA+AGG | 0.624436 | 4.4:-30974368 | MS.gene031564:CDS |
| ACAATAATAAGAGACAAAGC+AGG | 0.625178 | 4.4:-30973390 | MS.gene031564:CDS |
| ATCAAAAGCTGGCTACAAAG+TGG | 0.627865 | 4.4:-30974810 | MS.gene031564:CDS |
| CTAACAGGTAAAGCGAATGA+GGG | 0.633458 | 4.4:-30973597 | MS.gene031564:intron |
| GAATCAAAATCAGATCTCAA+AGG | 0.635229 | 4.4:-30974032 | MS.gene031564:intron |
| GAAGTAGGAACACACAGAAG+TGG | 0.639178 | 4.4:-30973252 | MS.gene031564:CDS |
| CCCAAGAGAAGAAAACAAAG+AGG | 0.641068 | 4.4:+30975213 | None:intergenic |
| TTGCTGAGATGTTAGCAAAG+AGG | 0.642160 | 4.4:-30975463 | MS.gene031564:CDS |
| AAAATGGTGATAATCCAGCA+TGG | 0.647627 | 4.4:-30975072 | MS.gene031564:CDS |
| TATGATGATGGTCCTAGTAA+TGG | 0.648405 | 4.4:+30973492 | None:intergenic |
| CCTCAAAATCAAATGTGATG+CGG | 0.648723 | 4.4:-30974879 | MS.gene031564:CDS |
| CCGCTAGAAATCATCAATGG+AGG | 0.650624 | 4.4:+30974125 | None:intergenic |
| ACAGGTAAAGCGAATGAGGG+AGG | 0.655166 | 4.4:-30973594 | MS.gene031564:intron |
| CCTCCATTGATGATTTCTAG+CGG | 0.656669 | 4.4:-30974125 | MS.gene031564:CDS |
| GAGAATCGCAAATACAAACA+TGG | 0.657233 | 4.4:-30976538 | MS.gene031564:CDS |
| ATCGCTCACAAGCATATGTG+AGG | 0.657257 | 4.4:-30976494 | MS.gene031564:CDS |
| GGTGTTGAAAGAATGGTCAG+AGG | 0.659062 | 4.4:-30974597 | MS.gene031564:CDS |
| GTCCAAAAGGAGAGAAACAA+GGG | 0.659274 | 4.4:-30974367 | MS.gene031564:CDS |
| TATGTGCCAAGAAATTCACC+AGG | 0.661064 | 4.4:-30974422 | MS.gene031564:CDS |
| ATAATAAGAGACAAAGCAGG+TGG | 0.661476 | 4.4:-30973387 | MS.gene031564:CDS |
| GTAGGAACACACAGAAGTGG+TGG | 0.662276 | 4.4:-30973249 | MS.gene031564:CDS |
| ATACTTCTGCTCATCAAATG+GGG | 0.665706 | 4.4:-30973116 | MS.gene031564:CDS |
| GGATGATGATGAATCAAGCA+AGG | 0.668966 | 4.4:-30976449 | MS.gene031564:CDS |
| AAAGAGAAAAGATTGTGCAG+AGG | 0.669869 | 4.4:-30975298 | MS.gene031564:CDS |
| GAGTGTCATCCATTGTTGAG+GGG | 0.685569 | 4.4:-30976568 | MS.gene031564:CDS |
| TAACAGGATGCAAAGCTGAG+AGG | 0.688213 | 4.4:-30974295 | MS.gene031564:CDS |
| CATCCCGTGCTAATGACATG+GGG | 0.693536 | 4.4:-30974065 | MS.gene031564:CDS |
| AGGTGGACAAGTAACAACAG+AGG | 0.733762 | 4.4:-30973370 | MS.gene031564:CDS |
| ATGTGCCAAGAAATTCACCA+GGG | 0.759136 | 4.4:-30974421 | MS.gene031564:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCAAGTATTAAGAAAA+GGG | - | chr4.4:30975020-30975039 | MS.gene031564:CDS | 15.0% |
| !! | ATAATTAATCATTATTGAGT+TGG | - | chr4.4:30973722-30973741 | MS.gene031564:intron | 15.0% |
| !! | TAATTAATCATTATTGAGTT+GGG | - | chr4.4:30973723-30973742 | MS.gene031564:intron | 15.0% |
| !! | TGTCATAAAGTTTATAAATT+TGG | - | chr4.4:30973756-30973775 | MS.gene031564:intron | 15.0% |
| !!! | ATCATGTTATAAATTTTGAA+TGG | - | chr4.4:30973999-30974018 | MS.gene031564:intron | 15.0% |
| !!! | TAATTTTTTTTTTTCTTCCT+AGG | - | chr4.4:30975839-30975858 | MS.gene031564:intron | 15.0% |
| !!! | TTATGTGTATTTTTTTTTGT+GGG | - | chr4.4:30973470-30973489 | MS.gene031564:CDS | 15.0% |
| !!! | TTTTTTTATAAACATGGTAT+TGG | - | chr4.4:30975532-30975551 | MS.gene031564:intron | 15.0% |
| !! | AACATATTGAAACATAAATG+TGG | + | chr4.4:30973255-30973274 | None:intergenic | 20.0% |
| !! | ACATATTGAAACATAAATGT+GGG | + | chr4.4:30973254-30973273 | None:intergenic | 20.0% |
| !! | CAAAATCAAGTATTAAGAAA+AGG | - | chr4.4:30975019-30975038 | MS.gene031564:CDS | 20.0% |
| !! | GGTTTAAAGAATAAAAACAT+TGG | - | chr4.4:30975388-30975407 | MS.gene031564:CDS | 20.0% |
| !! | TTATAAACTTTATGACAACT+TGG | + | chr4.4:30973753-30973772 | None:intergenic | 20.0% |
| !! | TTGATTGAATAGTAATCATA+GGG | + | chr4.4:30976521-30976540 | None:intergenic | 20.0% |
| !! | TTTGAAAATAGTTACAAGAA+TGG | - | chr4.4:30975226-30975245 | MS.gene031564:CDS | 20.0% |
| !!! | AAGTGTTTTTTCTGAATATT+TGG | + | chr4.4:30973671-30973690 | None:intergenic | 20.0% |
| !!! | ATTTTCCAACCTTATTTTTA+AGG | - | chr4.4:30973864-30973883 | MS.gene031564:intron | 20.0% |
| !!! | CTTATGTGTATTTTTTTTTG+TGG | - | chr4.4:30973469-30973488 | MS.gene031564:CDS | 20.0% |
| !!! | CTTTTCTTAATACTTGATTT+TGG | + | chr4.4:30975021-30975040 | None:intergenic | 20.0% |
| !!! | GTTTAATTTTGATGTATTGT+TGG | + | chr4.4:30974345-30974364 | None:intergenic | 20.0% |
| !!! | TATGTGTATTTTTTTTTGTG+GGG | - | chr4.4:30973471-30973490 | MS.gene031564:CDS | 20.0% |
| !!! | TATTGATTAGAGTGATTTTA+TGG | - | chr4.4:30974071-30974090 | MS.gene031564:CDS | 20.0% |
| !!! | TGATTCAAGAATACTTATTT+TGG | - | chr4.4:30974808-30974827 | MS.gene031564:CDS | 20.0% |
| !!! | TTCTATAATTCCTTTTTCAA+GGG | + | chr4.4:30974510-30974529 | None:intergenic | 20.0% |
| !!! | TTTCTATAATTCCTTTTTCA+AGG | + | chr4.4:30974511-30974530 | None:intergenic | 20.0% |
| ! | AAATAAGGTTGGAAAATGAT+TGG | + | chr4.4:30973861-30973880 | None:intergenic | 25.0% |
| ! | AACAATGCATAAAATATGCA+AGG | + | chr4.4:30973509-30973528 | None:intergenic | 25.0% |
| ! | AACAGAAAGAAGAAATGTTT+GGG | - | chr4.4:30975253-30975272 | MS.gene031564:CDS | 25.0% |
| ! | AATGAAAATTGTACACAAGA+AGG | - | chr4.4:30974992-30975011 | MS.gene031564:CDS | 25.0% |
| ! | ATAATTGAAACACCATTACT+AGG | - | chr4.4:30975988-30976007 | MS.gene031564:intron | 25.0% |
| ! | CAATACCTTAAAAATAAGGT+TGG | + | chr4.4:30973872-30973891 | None:intergenic | 25.0% |
| ! | CCAACAATACCTTAAAAATA+AGG | + | chr4.4:30973876-30973895 | None:intergenic | 25.0% |
| ! | GTATGTATGTATGTATTCAT+CGG | - | chr4.4:30973127-30973146 | MS.gene031564:CDS | 25.0% |
| ! | GTTGATTGAATAGTAATCAT+AGG | + | chr4.4:30976522-30976541 | None:intergenic | 25.0% |
| ! | TAAACGAATGCAATTCTAAA+AGG | + | chr4.4:30974244-30974263 | None:intergenic | 25.0% |
| ! | TACCAATATACTTAAGAAAG+TGG | - | chr4.4:30974379-30974398 | MS.gene031564:CDS | 25.0% |
| ! | TATAGATAGTGTTTATCCAA+TGG | - | chr4.4:30976317-30976336 | MS.gene031564:intron | 25.0% |
| ! | TTCAATTATTGCTCTTGTAT+CGG | + | chr4.4:30975977-30975996 | None:intergenic | 25.0% |
| ! | TTCTAGTGATGAATAATCTT+CGG | + | chr4.4:30974738-30974757 | None:intergenic | 25.0% |
| !! | AATAGGATTGTAGATTTTCT+TGG | - | chr4.4:30976558-30976577 | MS.gene031564:CDS | 25.0% |
| !! | ATTGTAGATTTTCTTGGAAA+GGG | - | chr4.4:30976564-30976583 | MS.gene031564:CDS | 25.0% |
| !! | CTGCATTTTGTATTTCAAAT+AGG | - | chr4.4:30976541-30976560 | MS.gene031564:CDS | 25.0% |
| !! | GTGTAAATTCTTTTATAGCA+AGG | + | chr4.4:30974323-30974342 | None:intergenic | 25.0% |
| !! | TATAAATTTTGAATGGCAAC+AGG | - | chr4.4:30974006-30974025 | MS.gene031564:intron | 25.0% |
| !!! | ATTTTGTAGGTTGATGAAAA+TGG | - | chr4.4:30974404-30974423 | MS.gene031564:CDS | 25.0% |
| !!! | CCTTATTTTTAAGGTATTGT+TGG | - | chr4.4:30973873-30973892 | MS.gene031564:intron | 25.0% |
| !!! | CGTGTTTAACTATTTTTGTT+AGG | + | chr4.4:30973364-30973383 | None:intergenic | 25.0% |
| !!! | TCTATAATTCCTTTTTCAAG+GGG | + | chr4.4:30974509-30974528 | None:intergenic | 25.0% |
| !!! | TTTTAGGTGCATATTTTGTT+AGG | - | chr4.4:30973418-30973437 | MS.gene031564:CDS | 25.0% |
| AATCATTATTGTGGTTCATG+TGG | - | chr4.4:30975094-30975113 | MS.gene031564:intron | 30.0% | |
| ACAATAATAAGAGACAAAGC+AGG | - | chr4.4:30976102-30976121 | MS.gene031564:intron | 30.0% | |
| ACCAACAATATGAAAATGGA+GGG | - | chr4.4:30974771-30974790 | MS.gene031564:CDS | 30.0% | |
| ATATTCAGCACTATATCCAT+GGG | - | chr4.4:30976020-30976039 | MS.gene031564:intron | 30.0% | |
| ATGGACCAACAATATGAAAA+TGG | - | chr4.4:30974767-30974786 | MS.gene031564:CDS | 30.0% | |
| CAACAATCTCTATCTAACAA+AGG | - | chr4.4:30974557-30974576 | MS.gene031564:CDS | 30.0% | |
| CAACAGAAAGAAGAAATGTT+TGG | - | chr4.4:30975252-30975271 | MS.gene031564:CDS | 30.0% | |
| CGATTGAATTCAATTTGTAG+CGG | + | chr4.4:30976155-30976174 | None:intergenic | 30.0% | |
| GAAGATTATTCATCACTAGA+AGG | - | chr4.4:30974737-30974756 | MS.gene031564:CDS | 30.0% | |
| GAATCAAAATCAGATCTCAA+AGG | - | chr4.4:30975460-30975479 | MS.gene031564:CDS | 30.0% | |
| GTCCACTTTCTTAAGTATAT+TGG | + | chr4.4:30974384-30974403 | None:intergenic | 30.0% | |
| TATACTTCTGCTCATCAAAT+GGG | - | chr4.4:30976375-30976394 | MS.gene031564:intron | 30.0% | |
| TCTAGTGATGAATAATCTTC+GGG | + | chr4.4:30974737-30974756 | None:intergenic | 30.0% | |
| TGTTGATACTTCATATCCAA+TGG | + | chr4.4:30974450-30974469 | None:intergenic | 30.0% | |
| TTCTTGAATCAATAGAAGCT+AGG | + | chr4.4:30974799-30974818 | None:intergenic | 30.0% | |
| TTGCATTAAAACACCAGAAA+AGG | - | chr4.4:30974874-30974893 | MS.gene031564:CDS | 30.0% | |
| ! | ATACAAACATGGATTTTCTG+TGG | - | chr4.4:30972965-30972984 | MS.gene031564:CDS | 30.0% |
| ! | GATTGTAGATTTTCTTGGAA+AGG | - | chr4.4:30976563-30976582 | MS.gene031564:CDS | 30.0% |
| ! | TAAGAAAGTGGACATTTTGT+AGG | - | chr4.4:30974391-30974410 | MS.gene031564:CDS | 30.0% |
| ! | TATAGTGCTGAATATGATGA+TGG | + | chr4.4:30976015-30976034 | None:intergenic | 30.0% |
| !! | GAATCATCATTTGATGATGA+TGG | + | chr4.4:30975949-30975968 | None:intergenic | 30.0% |
| !!! | TCAAGAATACTTATTTTGGC+AGG | - | chr4.4:30974812-30974831 | MS.gene031564:CDS | 30.0% |
| !!! | TTGAGATCTGATTTTGATTC+TGG | + | chr4.4:30975460-30975479 | None:intergenic | 30.0% |
| AAAAAGAGACCCCTTGAAAA+AGG | - | chr4.4:30974497-30974516 | MS.gene031564:CDS | 35.0% | |
| AAAATGGTGATAATCCAGCA+TGG | - | chr4.4:30974420-30974439 | MS.gene031564:CDS | 35.0% | |
| AAACCGCTAGAAATCATCAA+TGG | + | chr4.4:30975373-30975392 | None:intergenic | 35.0% | |
| AAAGAGAAAAGATTGTGCAG+AGG | - | chr4.4:30974194-30974213 | MS.gene031564:CDS | 35.0% | |
| AAAGTAACAATTTCAGCAGG+TGG | - | chr4.4:30975331-30975350 | MS.gene031564:CDS | 35.0% | |
| AAATGTGATGCGGTAATTGT+TGG | - | chr4.4:30974623-30974642 | MS.gene031564:CDS | 35.0% | |
| AAGAGAAAAGATTGTGCAGA+GGG | - | chr4.4:30974195-30974214 | MS.gene031564:CDS | 35.0% | |
| AATCCAGTAAACAATGTCTC+AGG | + | chr4.4:30975614-30975633 | None:intergenic | 35.0% | |
| ATAATAAGAGACAAAGCAGG+TGG | - | chr4.4:30976105-30976124 | MS.gene031564:intron | 35.0% | |
| ATACTTCTGCTCATCAAATG+GGG | - | chr4.4:30976376-30976395 | MS.gene031564:intron | 35.0% | |
| ATGGGAGTGAATGAAAAAGA+AGG | - | chr4.4:30976408-30976427 | MS.gene031564:intron | 35.0% | |
| CATATTCAGCACTATATCCA+TGG | - | chr4.4:30976019-30976038 | MS.gene031564:intron | 35.0% | |
| CATGTATCGCTAAATCATGT+AGG | - | chr4.4:30975752-30975771 | MS.gene031564:intron | 35.0% | |
| CCTCAAAATCAAATGTGATG+CGG | - | chr4.4:30974613-30974632 | MS.gene031564:CDS | 35.0% | |
| CTTGAGAAGTTGCTGATAAA+GGG | + | chr4.4:30974160-30974179 | None:intergenic | 35.0% | |
| CTTGATTCATCATCATCCAT+TGG | + | chr4.4:30973041-30973060 | None:intergenic | 35.0% | |
| CTTGTAGATGCTGTTGAAAA+AGG | - | chr4.4:30975163-30975182 | MS.gene031564:intron | 35.0% | |
| GACCAACAATATGAAAATGG+AGG | - | chr4.4:30974770-30974789 | MS.gene031564:CDS | 35.0% | |
| GAGAATCGCAAATACAAACA+TGG | - | chr4.4:30972954-30972973 | MS.gene031564:CDS | 35.0% | |
| GATAGTGTTTATCCAATGGA+AGG | - | chr4.4:30976321-30976340 | MS.gene031564:intron | 35.0% | |
| GATCAATTAGAGACTGTATG+TGG | + | chr4.4:30975722-30975741 | None:intergenic | 35.0% | |
| GCAAAAGTAACAATTTCAGC+AGG | - | chr4.4:30975328-30975347 | MS.gene031564:CDS | 35.0% | |
| GCATAAAATATGCAAGGTCT+GGG | + | chr4.4:30973503-30973522 | None:intergenic | 35.0% | |
| GTATACTTCTGCTCATCAAA+TGG | - | chr4.4:30976374-30976393 | MS.gene031564:intron | 35.0% | |
| TAATGAGAACACTAGCGAAA+AGG | - | chr4.4:30976281-30976300 | MS.gene031564:intron | 35.0% | |
| TACAAATTCCAATTCTCACC+TGG | + | chr4.4:30976357-30976376 | None:intergenic | 35.0% | |
| TATTGTGGTTCATGTGGTTA+TGG | - | chr4.4:30975100-30975119 | MS.gene031564:intron | 35.0% | |
| TCATATTGTTGGTCCATTGA+AGG | + | chr4.4:30974764-30974783 | None:intergenic | 35.0% | |
| TGATGAAAATGGTGAGAGTT+GGG | - | chr4.4:30976437-30976456 | MS.gene031564:intron | 35.0% | |
| TGCATAAAATATGCAAGGTC+TGG | + | chr4.4:30973504-30973523 | None:intergenic | 35.0% | |
| TTCCATTCAGGAACTTCTTT+CGG | + | chr4.4:30973199-30973218 | None:intergenic | 35.0% | |
| TTGATGAAAATGGTGAGAGT+TGG | - | chr4.4:30976436-30976455 | MS.gene031564:intron | 35.0% | |
| TTGTTCTTTCTAAGCTCATG+AGG | - | chr4.4:30973524-30973543 | MS.gene031564:CDS | 35.0% | |
| ! | AGAAGAAAACAAAGAGGCAT+AGG | + | chr4.4:30974276-30974295 | None:intergenic | 35.0% |
| ! | AGTTCAGCTAAAAGGTTTTC+TGG | + | chr4.4:30973906-30973925 | None:intergenic | 35.0% |
| ! | CATAGAGTATCTATCTGCTA+TGG | - | chr4.4:30974943-30974962 | MS.gene031564:CDS | 35.0% |
| ! | CATTCTTTCAACACCTTTTC+TGG | + | chr4.4:30974890-30974909 | None:intergenic | 35.0% |
| ! | GAAGAAATGTTTGGGAGTTT+TGG | - | chr4.4:30975261-30975280 | MS.gene031564:CDS | 35.0% |
| ! | GCGAGCTAATCTATAGTTTT+AGG | - | chr4.4:30973402-30973421 | MS.gene031564:CDS | 35.0% |
| ! | GTTGTTCAAGTTCAGCTAAA+AGG | + | chr4.4:30973914-30973933 | None:intergenic | 35.0% |
| ! | TCCCTCCATTTTCATATTGT+TGG | + | chr4.4:30974775-30974794 | None:intergenic | 35.0% |
| !! | AAAGGTGCTGTGATAATAAC+AGG | - | chr4.4:30975181-30975200 | MS.gene031564:intron | 35.0% |
| !! | AAAGTGGTTGTTCTAGAGAA+AGG | - | chr4.4:30974698-30974717 | MS.gene031564:CDS | 35.0% |
| !! | AGAAAAGGGTGTCAAAATCT+TGG | - | chr4.4:30975034-30975053 | MS.gene031564:CDS | 35.0% |
| !! | CAGAAAAGGTGTTGAAAGAA+TGG | - | chr4.4:30974888-30974907 | MS.gene031564:CDS | 35.0% |
| !! | TATGATGATGGTCCTAGTAA+TGG | + | chr4.4:30976003-30976022 | None:intergenic | 35.0% |
| !! | TTGATGATGATGGTACTCTA+TGG | + | chr4.4:30975939-30975958 | None:intergenic | 35.0% |
| !!! | CCTCTTTGTTTTCTTCTCTT+GGG | - | chr4.4:30974279-30974298 | MS.gene031564:CDS | 35.0% |
| !!! | GATTTTGAGGATGTTGCTTT+TGG | + | chr4.4:30974603-30974622 | None:intergenic | 35.0% |
| !!! | TTTTTCAAGGGGTCTCTTTT+TGG | + | chr4.4:30974498-30974517 | None:intergenic | 35.0% |
| AACAAGGGACTCAAGTTACA+TGG | - | chr4.4:30975140-30975159 | MS.gene031564:intron | 40.0% | |
| AAGTTCCTGAATGGAATGCA+AGG | - | chr4.4:30973203-30973222 | MS.gene031564:CDS | 40.0% | |
| ACATACATACATACCTCGTC+AGG | + | chr4.4:30973113-30973132 | None:intergenic | 40.0% | |
| ATCAAAAGCTGGCTACAAAG+TGG | - | chr4.4:30974682-30974701 | MS.gene031564:CDS | 40.0% | |
| ATCACTAGAAGGTCCTTCAA+TGG | - | chr4.4:30974748-30974767 | MS.gene031564:CDS | 40.0% | |
| ATCCGAAAGAAGTTCCTGAA+TGG | - | chr4.4:30973194-30973213 | MS.gene031564:CDS | 40.0% | |
| ATGTGCCAAGAAATTCACCA+GGG | - | chr4.4:30975071-30975090 | MS.gene031564:CDS | 40.0% | |
| CAAATGGGGAGTTGTAGAAT+GGG | - | chr4.4:30976390-30976409 | MS.gene031564:intron | 40.0% | |
| CAACTTCTCAAGCTTGTCTT+TGG | - | chr4.4:30974168-30974187 | MS.gene031564:CDS | 40.0% | |
| CATACATACATACCTCGTCA+GGG | + | chr4.4:30973112-30973131 | None:intergenic | 40.0% | |
| CATTGTTACCAGGTGAGAAT+TGG | - | chr4.4:30976346-30976365 | MS.gene031564:intron | 40.0% | |
| CCCAAGAGAAGAAAACAAAG+AGG | + | chr4.4:30974282-30974301 | None:intergenic | 40.0% | |
| CTAACAGGTAAAGCGAATGA+GGG | - | chr4.4:30975895-30975914 | MS.gene031564:intron | 40.0% | |
| CTATGGAAACTGTTTGTGAG+AGG | - | chr4.4:30974960-30974979 | MS.gene031564:CDS | 40.0% | |
| CTGAGAATTCTAATAGCAGC+AGG | - | chr4.4:30976210-30976229 | MS.gene031564:intron | 40.0% | |
| CTTTACCTGTTAGGAATCAC+AGG | + | chr4.4:30975888-30975907 | None:intergenic | 40.0% | |
| CTTTCCCGATAATTAGTGTC+TGG | - | chr4.4:30975572-30975591 | MS.gene031564:intron | 40.0% | |
| GAAACTGTTTGTGAGAGGAT+TGG | - | chr4.4:30974965-30974984 | MS.gene031564:CDS | 40.0% | |
| GAACCACAATAATGATTCCC+TGG | + | chr4.4:30975091-30975110 | None:intergenic | 40.0% | |
| GAACCTGAGACATTGTTTAC+TGG | - | chr4.4:30975608-30975627 | MS.gene031564:intron | 40.0% | |
| GACAAAGAGAATATGAGAGC+TGG | - | chr4.4:30976174-30976193 | MS.gene031564:intron | 40.0% | |
| GAGACCAGACACTAATTATC+GGG | + | chr4.4:30975579-30975598 | None:intergenic | 40.0% | |
| GCTTGAGAAGTTGCTGATAA+AGG | + | chr4.4:30974161-30974180 | None:intergenic | 40.0% | |
| GGAGACCAGACACTAATTAT+CGG | + | chr4.4:30975580-30975599 | None:intergenic | 40.0% | |
| GTCCAAAAGGAGAGAAACAA+GGG | - | chr4.4:30975125-30975144 | MS.gene031564:intron | 40.0% | |
| TAAACAATGTCTCAGGTTCG+AGG | + | chr4.4:30975607-30975626 | None:intergenic | 40.0% | |
| TAAAGGGCCATTTCTTACTG+AGG | + | chr4.4:30974144-30974163 | None:intergenic | 40.0% | |
| TAGATGAAGATTCAGCTCCT+AGG | + | chr4.4:30975859-30975878 | None:intergenic | 40.0% | |
| TATGTGCCAAGAAATTCACC+AGG | - | chr4.4:30975070-30975089 | MS.gene031564:CDS | 40.0% | |
| TATGTTTCCTTCACTGCCAA+TGG | - | chr4.4:30973022-30973041 | MS.gene031564:CDS | 40.0% | |
| TCAAATGGGGAGTTGTAGAA+TGG | - | chr4.4:30976389-30976408 | MS.gene031564:intron | 40.0% | |
| TCACCAGGGAATCATTATTG+TGG | - | chr4.4:30975085-30975104 | MS.gene031564:intron | 40.0% | |
| TGATTCCCTGGTGAATTTCT+TGG | + | chr4.4:30975079-30975098 | None:intergenic | 40.0% | |
| TGCTATGCCTCAGTAAGAAA+TGG | - | chr4.4:30974134-30974153 | MS.gene031564:CDS | 40.0% | |
| TGCTGAGATGTTAGCAAAGA+GGG | - | chr4.4:30974030-30974049 | MS.gene031564:intron | 40.0% | |
| TGTCCAAAAGGAGAGAAACA+AGG | - | chr4.4:30975124-30975143 | MS.gene031564:intron | 40.0% | |
| TGTGGTTATGGTTGTCCAAA+AGG | - | chr4.4:30975112-30975131 | MS.gene031564:intron | 40.0% | |
| TTGCTGAGATGTTAGCAAAG+AGG | - | chr4.4:30974029-30974048 | MS.gene031564:intron | 40.0% | |
| TTGGCGAAGACTTTAAGTAG+TGG | - | chr4.4:30975280-30975299 | MS.gene031564:CDS | 40.0% | |
| ! | CCTCCATTGATGATTTCTAG+CGG | - | chr4.4:30975367-30975386 | MS.gene031564:CDS | 40.0% |
| ! | CTTTGTAGCCAGCTTTTGAT+AGG | + | chr4.4:30974682-30974701 | None:intergenic | 40.0% |
| ! | GGATGATGATGAATCAAGCA+AGG | - | chr4.4:30973043-30973062 | MS.gene031564:CDS | 40.0% |
| ! | GTTATGAAGTGTGCTGTTCT+TGG | + | chr4.4:30976084-30976103 | None:intergenic | 40.0% |
| ! | TTGGGCACTTTCTTGATTTG+TGG | - | chr4.4:30974109-30974128 | MS.gene031564:CDS | 40.0% |
| ! | TTTTATGGCTTCTAGCAACG+AGG | - | chr4.4:30974086-30974105 | MS.gene031564:CDS | 40.0% |
| !! | ATTTTGGCAGGTTCAACAGT+AGG | - | chr4.4:30974824-30974843 | MS.gene031564:CDS | 40.0% |
| !! | CCGCATCACATTTGATTTTG+AGG | + | chr4.4:30974616-30974635 | None:intergenic | 40.0% |
| !! | GAAGGTGCTGTTGATGAAAA+TGG | - | chr4.4:30976426-30976445 | MS.gene031564:intron | 40.0% |
| !!! | GCCTCTTTGTTTTCTTCTCT+TGG | - | chr4.4:30974278-30974297 | MS.gene031564:CDS | 40.0% |
| AACTTCTTTCGGATCGATCG+AGG | + | chr4.4:30973188-30973207 | None:intergenic | 45.0% | |
| AATCCAGCATGGAAAGCCAT+TGG | - | chr4.4:30974431-30974450 | MS.gene031564:CDS | 45.0% | |
| ACTTCTTTCGGATCGATCGA+GGG | + | chr4.4:30973187-30973206 | None:intergenic | 45.0% | |
| AGGTGGACAAGTAACAACAG+AGG | - | chr4.4:30976122-30976141 | MS.gene031564:intron | 45.0% | |
| ATACATACCTCGTCAGGGAT+TGG | + | chr4.4:30973107-30973126 | None:intergenic | 45.0% | |
| ATCGCTCACAAGCATATGTG+AGG | - | chr4.4:30972998-30973017 | MS.gene031564:CDS | 45.0% | |
| CAAATATCCAATCCCTGACG+AGG | - | chr4.4:30973097-30973116 | MS.gene031564:CDS | 45.0% | |
| CCGCTAGAAATCATCAATGG+AGG | + | chr4.4:30975370-30975389 | None:intergenic | 45.0% | |
| CCTAACAGGTAAAGCGAATG+AGG | - | chr4.4:30975894-30975913 | MS.gene031564:intron | 45.0% | |
| CCTCATTCGCTTTACCTGTT+AGG | + | chr4.4:30975897-30975916 | None:intergenic | 45.0% | |
| CTCGTCAGGGATTGGATATT+TGG | + | chr4.4:30973099-30973118 | None:intergenic | 45.0% | |
| CTGTTCCTTGCATTCCATTC+AGG | + | chr4.4:30973211-30973230 | None:intergenic | 45.0% | |
| GAAGTAGGAACACACAGAAG+TGG | - | chr4.4:30976240-30976259 | MS.gene031564:intron | 45.0% | |
| GAGTGTCATCCATTGTTGAG+GGG | - | chr4.4:30972924-30972943 | MS.gene031564:CDS | 45.0% | |
| GCACTATATCCATGGGAATC+AGG | - | chr4.4:30976027-30976046 | MS.gene031564:intron | 45.0% | |
| GCTTCTGTCCTATCAAAAGC+TGG | - | chr4.4:30974671-30974690 | MS.gene031564:CDS | 45.0% | |
| GGTAACAATGCTCCTTCCAT+TGG | + | chr4.4:30976336-30976355 | None:intergenic | 45.0% | |
| GGTGGACAAGTAACAACAGA+GGG | - | chr4.4:30976123-30976142 | MS.gene031564:intron | 45.0% | |
| GTATCCCCATGTCATTAGCA+CGG | + | chr4.4:30975434-30975453 | None:intergenic | 45.0% | |
| GTGGTGGTTCAGCTGTTAAT+TGG | - | chr4.4:30974846-30974865 | MS.gene031564:CDS | 45.0% | |
| TAACAGGATGCAAAGCTGAG+AGG | - | chr4.4:30975197-30975216 | MS.gene031564:intron | 45.0% | |
| TAGCTCGCTATCAAGATCAG+TGG | + | chr4.4:30973390-30973409 | None:intergenic | 45.0% | |
| TAGTCTAGTCCTGATTCCCA+TGG | + | chr4.4:30976039-30976058 | None:intergenic | 45.0% | |
| TATCCAATGGCTTTCCATGC+TGG | + | chr4.4:30974437-30974456 | None:intergenic | 45.0% | |
| TATCCCCATGTCATTAGCAC+GGG | + | chr4.4:30975433-30975452 | None:intergenic | 45.0% | |
| TCATCATCCATTGGCAGTGA+AGG | + | chr4.4:30973032-30973051 | None:intergenic | 45.0% | |
| TCATCCCGTGCTAATGACAT+GGG | - | chr4.4:30975426-30975445 | MS.gene031564:CDS | 45.0% | |
| TCGATCCTGTGATTCCTAAC+AGG | - | chr4.4:30975880-30975899 | MS.gene031564:intron | 45.0% | |
| TTAGCACGGGATGAAGATGA+AGG | + | chr4.4:30975420-30975439 | None:intergenic | 45.0% | |
| TTCATCCCGTGCTAATGACA+TGG | - | chr4.4:30975425-30975444 | MS.gene031564:CDS | 45.0% | |
| ! | GGAGTGTCATCCATTGTTGA+GGG | - | chr4.4:30972923-30972942 | MS.gene031564:CDS | 45.0% |
| ! | GGTGTTGAAAGAATGGTCAG+AGG | - | chr4.4:30974895-30974914 | MS.gene031564:CDS | 45.0% |
| !! | ATGGAAGGAGCATTGTTACC+AGG | - | chr4.4:30976336-30976355 | MS.gene031564:intron | 45.0% |
| !! | GATGCGGTAATTGTTGGTTC+TGG | - | chr4.4:30974629-30974648 | MS.gene031564:CDS | 45.0% |
| !! | GTAATTGTTGGTTCTGGCTG+TGG | - | chr4.4:30974635-30974654 | MS.gene031564:CDS | 45.0% |
| !! | GTCCCTTGTTTCTCTCCTTT+TGG | + | chr4.4:30975130-30975149 | None:intergenic | 45.0% |
| !!! | GGGTCTCTTTTTGGTGTCAT+TGG | + | chr4.4:30974489-30974508 | None:intergenic | 45.0% |
| !!! | GTTGCTTTTGGAGTCTAGTG+TGG | + | chr4.4:30974591-30974610 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTTTATAAACA+TGG | - | chr4.4:30975526-30975545 | MS.gene031564:intron | 5.0% |
| AACAGCTTCGATGTGCATGG+TGG | - | chr4.4:30973226-30973245 | MS.gene031564:CDS | 50.0% | |
| ACAGCTTCGATGTGCATGGT+GGG | - | chr4.4:30973227-30973246 | MS.gene031564:CDS | 50.0% | |
| ACAGGTAAAGCGAATGAGGG+AGG | - | chr4.4:30975898-30975917 | MS.gene031564:intron | 50.0% | |
| AGGAACAGCTTCGATGTGCA+TGG | - | chr4.4:30973223-30973242 | MS.gene031564:CDS | 50.0% | |
| AGTGTGCTTCCAACTGCTGT+TGG | - | chr4.4:30976489-30976508 | MS.gene031564:CDS | 50.0% | |
| ATGGCTTCTAGCAACGAGGT+TGG | - | chr4.4:30974090-30974109 | MS.gene031564:CDS | 50.0% | |
| CATCCCGTGCTAATGACATG+GGG | - | chr4.4:30975427-30975446 | MS.gene031564:CDS | 50.0% | |
| GGGTTAACACCAACAGCAGT+TGG | + | chr4.4:30976501-30976520 | None:intergenic | 50.0% | |
| GTAGGAACACACAGAAGTGG+TGG | - | chr4.4:30976243-30976262 | MS.gene031564:intron | 50.0% | |
| GTGAGAGTTGGGAAGCTGAA+GGG | - | chr4.4:30976448-30976467 | MS.gene031564:CDS | 50.0% | |
| TCTCTCACACCCCTCAACAA+TGG | + | chr4.4:30972936-30972955 | None:intergenic | 50.0% | |
| TGATTACGCGCTGTTACGAG+TGG | + | chr4.4:30975648-30975667 | None:intergenic | 50.0% | |
| TGGAGTCTAGTGTGGCATTG+AGG | + | chr4.4:30974583-30974602 | None:intergenic | 50.0% | |
| TGGCTTCTAGCAACGAGGTT+GGG | - | chr4.4:30974091-30974110 | MS.gene031564:CDS | 50.0% | |
| TTGGCAGGTTCAACAGTAGG+TGG | - | chr4.4:30974827-30974846 | MS.gene031564:CDS | 50.0% | |
| !! | ATTGTTGGTTCTGGCTGTGG+AGG | - | chr4.4:30974638-30974657 | MS.gene031564:CDS | 50.0% |
| !! | GGGAGTGTCATCCATTGTTG+AGG | - | chr4.4:30972922-30972941 | MS.gene031564:CDS | 50.0% |
| ATGTCTCAGGTTCGAGGCAG+TGG | + | chr4.4:30975601-30975620 | None:intergenic | 55.0% | |
| GCAGCAGGAGCAGTTGAAGT+AGG | - | chr4.4:30976225-30976244 | MS.gene031564:intron | 55.0% | |
| GCAGGTTCAACAGTAGGTGG+TGG | - | chr4.4:30974830-30974849 | MS.gene031564:CDS | 55.0% | |
| GGTGAGAGTTGGGAAGCTGA+AGG | - | chr4.4:30976447-30976466 | MS.gene031564:CDS | 55.0% | |
| TTCGGATCGATCGAGGGAGA+GGG | + | chr4.4:30973181-30973200 | None:intergenic | 55.0% | |
| TTTCGGATCGATCGAGGGAG+AGG | + | chr4.4:30973182-30973201 | None:intergenic | 55.0% | |
| ATCGATCGAGGGAGAGGGAG+AGG | + | chr4.4:30973176-30973195 | None:intergenic | 60.0% | |
| TCGATCGAGGGAGAGGGAGA+GGG | + | chr4.4:30973175-30973194 | None:intergenic | 60.0% | |
| !! | GTTGGTTCTGGCTGTGGAGG+AGG | - | chr4.4:30974641-30974660 | MS.gene031564:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 30972915 | 30976599 | 30972915 | ID=MS.gene031564 |
| chr4.4 | mRNA | 30972915 | 30976599 | 30972915 | ID=MS.gene031564.t1;Parent=MS.gene031564 |
| chr4.4 | exon | 30976447 | 30976599 | 30976447 | ID=MS.gene031564.t1.exon1;Parent=MS.gene031564.t1 |
| chr4.4 | CDS | 30976447 | 30976599 | 30976447 | ID=cds.MS.gene031564.t1;Parent=MS.gene031564.t1 |
| chr4.4 | exon | 30975214 | 30975486 | 30975214 | ID=MS.gene031564.t1.exon2;Parent=MS.gene031564.t1 |
| chr4.4 | CDS | 30975214 | 30975486 | 30975214 | ID=cds.MS.gene031564.t1;Parent=MS.gene031564.t1 |
| chr4.4 | exon | 30974033 | 30975101 | 30974033 | ID=MS.gene031564.t1.exon3;Parent=MS.gene031564.t1 |
| chr4.4 | CDS | 30974033 | 30975101 | 30974033 | ID=cds.MS.gene031564.t1;Parent=MS.gene031564.t1 |
| chr4.4 | exon | 30972915 | 30973612 | 30972915 | ID=MS.gene031564.t1.exon4;Parent=MS.gene031564.t1 |
| chr4.4 | CDS | 30972915 | 30973612 | 30972915 | ID=cds.MS.gene031564.t1;Parent=MS.gene031564.t1 |
| Gene Sequence |
| Protein sequence |
