Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031565.t1 | RHN61912.1 | 92.7 | 757 | 31 | 2 | 1 | 738 | 10 | 761 | 0.00E+00 | 1403.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031565.t1 | B5WWZ8 | 76.5 | 757 | 149 | 8 | 1 | 737 | 1 | 748 | 0.0e+00 | 1151.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031565.t1 | A0A396I8H5 | 92.7 | 757 | 31 | 2 | 1 | 738 | 10 | 761 | 0.0e+00 | 1403.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72746 | MS.gene031565 | PPI |
| MS.gene72745 | MS.gene031565 | PPI |
| MS.gene82452 | MS.gene031565 | PPI |
| MS.gene86456 | MS.gene031565 | PPI |
| MS.gene83396 | MS.gene031565 | PPI |
| MS.gene056569 | MS.gene031565 | PPI |
| MS.gene067993 | MS.gene031565 | PPI |
| MS.gene82943 | MS.gene031565 | PPI |
| MS.gene82942 | MS.gene031565 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031565.t1 | MTR_4g080823 | 91.601 | 762 | 39 | 3 | 1 | 742 | 10 | 766 | 0.0 | 1378 |
| MS.gene031565.t1 | MTR_4g080890 | 87.335 | 758 | 71 | 3 | 1 | 738 | 1 | 753 | 0.0 | 1312 |
| MS.gene031565.t1 | MTR_0651s0010 | 87.538 | 658 | 57 | 3 | 1 | 638 | 1 | 653 | 0.0 | 1131 |
| MS.gene031565.t1 | MTR_7g097210 | 55.511 | 753 | 291 | 11 | 4 | 733 | 3 | 734 | 0.0 | 808 |
| MS.gene031565.t1 | MTR_1g075650 | 60.549 | 583 | 179 | 8 | 152 | 733 | 3 | 535 | 0.0 | 711 |
| MS.gene031565.t1 | MTR_7g097210 | 61.217 | 575 | 210 | 7 | 160 | 733 | 2 | 564 | 0.0 | 691 |
| MS.gene031565.t1 | MTR_5g025650 | 43.075 | 787 | 362 | 18 | 12 | 735 | 64 | 827 | 0.0 | 568 |
| MS.gene031565.t1 | MTR_8g072210 | 40.746 | 778 | 374 | 14 | 19 | 735 | 57 | 808 | 0.0 | 554 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031565.t1 | AT3G23410 | 58.266 | 738 | 276 | 7 | 22 | 736 | 15 | 743 | 0.0 | 839 |
| MS.gene031565.t1 | AT3G23410 | 62.006 | 658 | 240 | 4 | 82 | 736 | 25 | 675 | 0.0 | 818 |
| MS.gene031565.t1 | AT4G28570 | 55.159 | 756 | 295 | 8 | 2 | 733 | 7 | 742 | 0.0 | 801 |
| MS.gene031565.t1 | AT4G28570 | 55.159 | 756 | 295 | 8 | 2 | 733 | 7 | 742 | 0.0 | 801 |
| MS.gene031565.t1 | AT1G03990 | 48.810 | 756 | 346 | 13 | 7 | 735 | 13 | 754 | 0.0 | 706 |
| MS.gene031565.t1 | AT4G19380 | 41.864 | 762 | 370 | 16 | 18 | 735 | 34 | 766 | 3.89e-179 | 531 |
| MS.gene031565.t1 | AT4G19380 | 42.098 | 753 | 363 | 16 | 27 | 735 | 1 | 724 | 4.73e-178 | 527 |
Find 144 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACATTTCTTCTTCTTTC+TGG | 0.073106 | 4.4:+30983554 | None:intergenic |
| GTCCCTTGTTTCTCTCCTTT+TGG | 0.180580 | 4.4:+30983681 | None:intergenic |
| TCTTGTTTGAAAATAATTAT+AGG | 0.260541 | 4.4:-30983587 | MS.gene031565:CDS |
| CAACTTCTCAAGCTTGTCTT+TGG | 0.271024 | 4.4:-30984641 | MS.gene031565:CDS |
| TGATTCCCTGGTGAATTTCT+TGG | 0.279412 | 4.4:+30983732 | None:intergenic |
| TTTCTTCTTCTTTCTGGTAT+TGG | 0.293147 | 4.4:+30983560 | None:intergenic |
| GTGATTAAATGTGCTGTTCT+TGG | 0.295870 | 4.4:+30982726 | None:intergenic |
| ATGGACCAACAATATGAAAA+TGG | 0.302883 | 4.4:-30984041 | MS.gene031565:CDS |
| CTTGAGAAGTTGTGGATAAA+TGG | 0.306281 | 4.4:+30984652 | None:intergenic |
| AAACCACTAGAGATCATTAA+TGG | 0.311728 | 4.4:+30983435 | None:intergenic |
| TATTGTGGTTCATGTGGTTA+TGG | 0.314221 | 4.4:-30983708 | MS.gene031565:CDS |
| TATTGATAAGGGTGATTCTA+TGG | 0.316225 | 4.4:-30984734 | MS.gene031565:intron |
| CAGAAAGAAGAAGAAATGTT+TGG | 0.347440 | 4.4:-30983553 | MS.gene031565:CDS |
| TAAGCGAATGCGAGTCTAAA+AGG | 0.353718 | 4.4:+30984568 | None:intergenic |
| TTCTAGTGATGAATAATCTT+CGG | 0.371885 | 4.4:+30984073 | None:intergenic |
| TCAATATATCCATGGGAATC+AGG | 0.373653 | 4.4:-30982780 | MS.gene031565:CDS |
| CATTGTCACCAGGTGAGAAT+TGG | 0.377821 | 4.4:-30982461 | MS.gene031565:CDS |
| GTATACTTCTGCTCATCAAA+TGG | 0.389845 | 4.4:-30982433 | MS.gene031565:CDS |
| TATACTTCTGCTCATCAAAT+GGG | 0.393187 | 4.4:-30982432 | MS.gene031565:CDS |
| TGCTCTGTCTTAGTAAGAAA+TGG | 0.394689 | 4.4:-30984675 | MS.gene031565:CDS |
| GACTCTACTGTTTAAAGTCT+TGG | 0.401679 | 4.4:+30983521 | None:intergenic |
| TCTATGGCTTCAACAAGGTT+GGG | 0.403552 | 4.4:-30984718 | MS.gene031565:CDS |
| TCTCTAGAACAATCACTTTG+TGG | 0.413037 | 4.4:+30984114 | None:intergenic |
| CAAAATCAAGTACTAAGAAA+AGG | 0.418237 | 4.4:-30983789 | MS.gene031565:CDS |
| TCTAGTGATGAATAATCTTC+GGG | 0.422485 | 4.4:+30984074 | None:intergenic |
| GATGCAGTAGTTGTTGGTTC+TGG | 0.425266 | 4.4:-30984179 | MS.gene031565:CDS |
| CACAAAATGTGTTGAAAGAA+TGG | 0.430850 | 4.4:-30983920 | MS.gene031565:CDS |
| AGAAAGAAGAAGAAATGTTT+GGG | 0.431123 | 4.4:-30983552 | MS.gene031565:CDS |
| TTGGGGACTTTGTTGATTTG+TGG | 0.432818 | 4.4:-30984700 | MS.gene031565:CDS |
| TGTGGTTATGGTTGTCCAAA+AGG | 0.434505 | 4.4:-30983696 | MS.gene031565:CDS |
| GTAGTTGTTGGTTCTGGCTG+TGG | 0.438334 | 4.4:-30984173 | MS.gene031565:CDS |
| AGAAAAGGGTGCCAAAATCT+TGG | 0.440950 | 4.4:-30983774 | MS.gene031565:CDS |
| TTCTATGGCTTCAACAAGGT+TGG | 0.443648 | 4.4:-30984719 | MS.gene031565:CDS |
| CTTGTAGATGCTGTTGAAAA+AGG | 0.445193 | 4.4:-30983645 | MS.gene031565:CDS |
| GAAGGTGCTGTTGATGAAAA+TGG | 0.445503 | 4.4:-30982381 | MS.gene031565:CDS |
| GTTGACTGAATAGTGATCAT+AGG | 0.452880 | 4.4:+30982288 | None:intergenic |
| AAAGGTGCTGTGATCATAAC+AGG | 0.453948 | 4.4:-30983627 | MS.gene031565:CDS |
| GTGGTGGTTCAGCTGTTAAT+TGG | 0.455365 | 4.4:-30983962 | MS.gene031565:CDS |
| GCATCATCCATTGGCAATGA+AGG | 0.456373 | 4.4:+30985844 | None:intergenic |
| ACCTGCAGAAATTGTCACTT+TGG | 0.458514 | 4.4:+30983476 | None:intergenic |
| CAGAAATGTTGAAGAAAGAC+TGG | 0.461374 | 4.4:+30985773 | None:intergenic |
| TATCCGATGGCTTTCCATGC+CGG | 0.465397 | 4.4:+30984374 | None:intergenic |
| TCATATTGTTGGTCCATTGA+AGG | 0.466560 | 4.4:+30984047 | None:intergenic |
| AAAGTGATTGTTCTAGAGAA+AGG | 0.469246 | 4.4:-30984110 | MS.gene031565:CDS |
| ACACACATATATACCTCGTC+AGG | 0.472782 | 4.4:+30985733 | None:intergenic |
| GAAGAAATGTTTGGGAGTGT+TGG | 0.474637 | 4.4:-30983544 | MS.gene031565:CDS |
| ATAATTGAGACACCATTACT+TGG | 0.476662 | 4.4:-30982819 | MS.gene031565:CDS |
| TGCAGAGGGCTCTCAAGCTT+AGG | 0.477034 | 4.4:-30984600 | MS.gene031565:CDS |
| TCAAATGGGGAGTTGTAGAA+TGG | 0.477133 | 4.4:-30982418 | MS.gene031565:CDS |
| GCTTCTGTCCTTTCAAATGC+AGG | 0.481266 | 4.4:-30984137 | MS.gene031565:CDS |
| GTTGGTTCTGGCTGTGGAGG+AGG | 0.482681 | 4.4:-30984167 | MS.gene031565:CDS |
| AAATGTGATGCAGTAGTTGT+TGG | 0.485936 | 4.4:-30984185 | MS.gene031565:CDS |
| GGTGACAATGCTCCTTCCAT+TGG | 0.486201 | 4.4:+30982474 | None:intergenic |
| ATATATACCTCGTCAGGGAT+TGG | 0.487511 | 4.4:+30985739 | None:intergenic |
| AAAATCAAGTACTAAGAAAA+GGG | 0.492431 | 4.4:-30983788 | MS.gene031565:CDS |
| CTTTGTGGCCTGCATTTGAA+AGG | 0.494540 | 4.4:+30984129 | None:intergenic |
| TGATGAAAATGGTGAGAGTT+GGG | 0.496388 | 4.4:-30982370 | MS.gene031565:CDS |
| CTTAGAGTATCTATCTGCTA+TGG | 0.499902 | 4.4:-30983865 | MS.gene031565:CDS |
| CATATGCATCAATATATCCA+TGG | 0.500085 | 4.4:-30982788 | MS.gene031565:CDS |
| GAAGATTATTCATCACTAGA+AGG | 0.507111 | 4.4:-30984071 | MS.gene031565:CDS |
| TGTGTTGCCTTCATTGCCAA+TGG | 0.507516 | 4.4:-30985851 | MS.gene031565:CDS |
| GCTGGTTCAACAGTAGGTGG+TGG | 0.508719 | 4.4:-30983978 | MS.gene031565:CDS |
| TTAATGATGAGGATACTTTG+TGG | 0.510276 | 4.4:+30982871 | None:intergenic |
| GCAGCAGGAGCTGTTGAAGT+AGG | 0.511117 | 4.4:-30982582 | MS.gene031565:CDS |
| TATCCCCATGTCATTAGTAC+AGG | 0.513550 | 4.4:+30983375 | None:intergenic |
| ATCACTAGAAGGTCCTTCAA+TGG | 0.515670 | 4.4:-30984060 | MS.gene031565:CDS |
| AGTGTGCTTCCAACTGCTGT+TGG | 0.516894 | 4.4:-30982318 | MS.gene031565:CDS |
| TAATGAGAACACTAGCGAAA+AGG | 0.517011 | 4.4:-30982526 | MS.gene031565:CDS |
| CACAATGAAGCTACAAATTG+AGG | 0.519287 | 4.4:-30983499 | MS.gene031565:CDS |
| GGATTAACACCAACAGCAGT+TGG | 0.519690 | 4.4:+30982309 | None:intergenic |
| GAAACTGTGTGTGAGAGAAT+TGG | 0.522367 | 4.4:-30983843 | MS.gene031565:CDS |
| TTGAGTCAAGTGTGACATTG+AGG | 0.526976 | 4.4:+30984228 | None:intergenic |
| ATGGAAAGCCATCGGATATG+AGG | 0.528852 | 4.4:-30984369 | MS.gene031565:CDS |
| AAAGTGACAATTTCTGCAGG+TGG | 0.529305 | 4.4:-30983474 | MS.gene031565:CDS |
| AGAAGAAAACAAAGAGGCAT+AGG | 0.530309 | 4.4:+30984536 | None:intergenic |
| CTATGGCTTCAACAAGGTTG+GGG | 0.530442 | 4.4:-30984717 | MS.gene031565:CDS |
| AAGACAAGCTTGAGAAGTTG+TGG | 0.536089 | 4.4:+30984644 | None:intergenic |
| TATCACAGGTAAAATCTATG+AGG | 0.536553 | 4.4:-30982913 | MS.gene031565:intron |
| CTGAGAATTCTAATAGCAGC+AGG | 0.537001 | 4.4:-30982597 | MS.gene031565:CDS |
| ATACTCTAAGCTTTCAAAGA+GGG | 0.538565 | 4.4:+30983878 | None:intergenic |
| TATAGATAGTGTTTATCCAA+TGG | 0.540962 | 4.4:-30982490 | MS.gene031565:CDS |
| AACGAAAATCGTACACAAGA+AGG | 0.544986 | 4.4:-30983816 | MS.gene031565:CDS |
| TTGCTAAGAGCATCATCCAT+TGG | 0.546651 | 4.4:+30985835 | None:intergenic |
| GCCAAAGTGACAATTTCTGC+AGG | 0.549592 | 4.4:-30983477 | MS.gene031565:CDS |
| TTGATGAAAATGGTGAGAGT+TGG | 0.551525 | 4.4:-30982371 | MS.gene031565:CDS |
| AAGAGAAAAGATTGTGCAGA+GGG | 0.551533 | 4.4:-30984614 | MS.gene031565:CDS |
| CAAATGGGGAGTTGTAGAAT+GGG | 0.552016 | 4.4:-30982417 | MS.gene031565:CDS |
| TGAATGATCATTTAATGATG+AGG | 0.555682 | 4.4:+30982860 | None:intergenic |
| GAACCACAATAATGATTCCC+TGG | 0.558303 | 4.4:+30983720 | None:intergenic |
| TTTGCTGGTTCAACAGTAGG+TGG | 0.559029 | 4.4:-30983981 | MS.gene031565:CDS |
| TATATTGATGCATATGATGA+TGG | 0.559413 | 4.4:+30982795 | None:intergenic |
| AATCATTATTGTGGTTCATG+TGG | 0.563673 | 4.4:-30983714 | MS.gene031565:CDS |
| TCCATCCTGTACTAATGACA+TGG | 0.567525 | 4.4:-30983380 | MS.gene031565:CDS |
| GGTGAGAGTTGGGAAGCTGA+AGG | 0.571561 | 4.4:-30982360 | MS.gene031565:CDS |
| AAGTGACAATTTCTGCAGGT+GGG | 0.574604 | 4.4:-30983473 | MS.gene031565:CDS |
| AAGTCAAGTCCTGATTCCCA+TGG | 0.575765 | 4.4:+30982771 | None:intergenic |
| AGTGACAATTTCTGCAGGTG+GGG | 0.576018 | 4.4:-30983472 | MS.gene031565:CDS |
| ATAATAAGAGACAAAGCAAG+TGG | 0.576779 | 4.4:-30982702 | MS.gene031565:CDS |
| TACTCTAAGCTTTCAAAGAG+GGG | 0.577026 | 4.4:+30983879 | None:intergenic |
| GATAGAGAGAATATGAGAGC+TGG | 0.578200 | 4.4:-30982633 | MS.gene031565:CDS |
| CCCATGTCATTAGTACAGGA+TGG | 0.579090 | 4.4:+30983379 | None:intergenic |
| GTTGTTGGTTCTGGCTGTGG+AGG | 0.580402 | 4.4:-30984170 | MS.gene031565:CDS |
| TAGAATGGGAGTGAATGAAA+AGG | 0.583569 | 4.4:-30982403 | MS.gene031565:CDS |
| TCACCAGGGAATCATTATTG+TGG | 0.584122 | 4.4:-30983723 | MS.gene031565:CDS |
| ATATGCATCAATATATCCAT+GGG | 0.588719 | 4.4:-30982787 | MS.gene031565:CDS |
| AACAAGGGACTCAAGTTACA+TGG | 0.588903 | 4.4:-30983668 | MS.gene031565:CDS |
| GATAGTGTTTATCCAATGGA+AGG | 0.590334 | 4.4:-30982486 | MS.gene031565:CDS |
| TCTCTCACACCACTCAACAA+TGG | 0.593983 | 4.4:+30985940 | None:intergenic |
| AGTTGTGTCATGTTCATGCA+TGG | 0.599087 | 4.4:+30984277 | None:intergenic |
| TACAAATTCCAATTCTCACC+TGG | 0.600068 | 4.4:+30982453 | None:intergenic |
| ATGGAAGGAGCATTGTCACC+AGG | 0.601599 | 4.4:-30982471 | MS.gene031565:CDS |
| CAACAATCTCTATCTAACAA+AGG | 0.604364 | 4.4:-30984251 | MS.gene031565:CDS |
| GATACTCTAAGCTTTCAAAG+AGG | 0.612780 | 4.4:+30983877 | None:intergenic |
| GTAGGAACACACAGAAGTGA+TGG | 0.615648 | 4.4:-30982564 | MS.gene031565:CDS |
| ATCACAGGTAAAATCTATGA+GGG | 0.616658 | 4.4:-30982912 | MS.gene031565:intron |
| CCATCCTGTACTAATGACAT+GGG | 0.618479 | 4.4:-30983379 | MS.gene031565:CDS |
| TGTCCAAAAGGAGAGAAACA+AGG | 0.624436 | 4.4:-30983684 | MS.gene031565:CDS |
| TGTTGATACCTCATATCCGA+TGG | 0.624751 | 4.4:+30984361 | None:intergenic |
| AAAATGGTGATAATCCGGCA+TGG | 0.627391 | 4.4:-30984388 | MS.gene031565:CDS |
| AATCCGGCATGGAAAGCCAT+CGG | 0.629555 | 4.4:-30984377 | MS.gene031565:CDS |
| CCACCATTAATGATCTCTAG+TGG | 0.630098 | 4.4:-30983438 | MS.gene031565:CDS |
| GTGAGAGTTGGGAAGCTGAA+GGG | 0.632909 | 4.4:-30982359 | MS.gene031565:CDS |
| CACACATATATACCTCGTCA+GGG | 0.633164 | 4.4:+30985734 | None:intergenic |
| GAATCAAAATCAGATCTCAA+AGG | 0.635229 | 4.4:-30983345 | MS.gene031565:intron |
| TATGATGATGGTCCAAGTAA+TGG | 0.637944 | 4.4:+30982807 | None:intergenic |
| ATGGGAGTGAATGAAAAGGA+AGG | 0.638461 | 4.4:-30982399 | MS.gene031565:CDS |
| CCCAAGAGAAGAAAACAAAG+AGG | 0.641068 | 4.4:+30984530 | None:intergenic |
| ATGAGAGCTGGTTTACAACA+AGG | 0.645336 | 4.4:-30982621 | MS.gene031565:CDS |
| GACCAACAATATGAAAATGG+AGG | 0.646970 | 4.4:-30984038 | MS.gene031565:CDS |
| GTGATTCTATGGCTTCAACA+AGG | 0.648828 | 4.4:-30984723 | MS.gene031565:CDS |
| GTCACTAACAAGCATATGTG+AGG | 0.652709 | 4.4:-30985875 | MS.gene031565:CDS |
| GAGAATAGCAAATACAAACA+TGG | 0.657233 | 4.4:-30985919 | MS.gene031565:CDS |
| GTCCAAAAGGAGAGAAACAA+GGG | 0.659274 | 4.4:-30983683 | MS.gene031565:CDS |
| TATGTGCCAAGAAATTCACC+AGG | 0.661064 | 4.4:-30983738 | MS.gene031565:CDS |
| ATACTTCTGCTCATCAAATG+GGG | 0.665706 | 4.4:-30982431 | MS.gene031565:CDS |
| AAAGAGAAAAGATTGTGCAG+AGG | 0.669869 | 4.4:-30984615 | MS.gene031565:CDS |
| TATGTATCCAATCCCTGACG+AGG | 0.674932 | 4.4:-30985746 | MS.gene031565:intron |
| ACAGGTAAAATCTATGAGGG+AGG | 0.676529 | 4.4:-30982909 | MS.gene031565:intron |
| CCACTAGAGATCATTAATGG+TGG | 0.685061 | 4.4:+30983438 | None:intergenic |
| TGATTATGATGAATCAAGCA+AGG | 0.685314 | 4.4:-30985800 | MS.gene031565:CDS |
| ATGCGAGTCTAAAAGGAGTG+AGG | 0.691376 | 4.4:+30984575 | None:intergenic |
| CATCCTGTACTAATGACATG+GGG | 0.691532 | 4.4:-30983378 | MS.gene031565:CDS |
| GAGTGTCATCCATTGTTGAG+TGG | 0.715422 | 4.4:-30985949 | MS.gene031565:CDS |
| ATGTGCCAAGAAATTCACCA+GGG | 0.759136 | 4.4:-30983737 | MS.gene031565:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTAAAATAACAACAT+CGG | - | chr4.4:30982768-30982787 | MS.gene031565:CDS | 10.0% |
| !!! | ACTTCTTATAAATTTATTTT+AGG | + | chr4.4:30983004-30983023 | None:intergenic | 10.0% |
| !!! | CTTCTTATAAATTTATTTTA+GGG | + | chr4.4:30983003-30983022 | None:intergenic | 10.0% |
| !! | ACTCTTTATAAAATTATGTA+AGG | + | chr4.4:30983215-30983234 | None:intergenic | 15.0% |
| !! | ATAATGTAAAGATCTAATAT+GGG | - | chr4.4:30983068-30983087 | MS.gene031565:intron | 15.0% |
| !!! | ATGAAAAATTTTAGAGTAAA+GGG | + | chr4.4:30982956-30982975 | None:intergenic | 15.0% |
| !!! | GTTTTTTTTAACCATATTAT+TGG | - | chr4.4:30984892-30984911 | MS.gene031565:intron | 15.0% |
| !!! | TATGAAAAATTTTAGAGTAA+AGG | + | chr4.4:30982957-30982976 | None:intergenic | 15.0% |
| !!! | TCTTGTTTGAAAATAATTAT+AGG | - | chr4.4:30984592-30984611 | MS.gene031565:CDS | 15.0% |
| !! | AAAATCAAGTACTAAGAAAA+GGG | - | chr4.4:30984391-30984410 | MS.gene031565:CDS | 20.0% |
| !! | AAATTGAACTTTAAACTTTC+AGG | + | chr4.4:30982840-30982859 | None:intergenic | 20.0% |
| !! | ATATAAGTTTGTAAGATAAG+AGG | + | chr4.4:30983242-30983261 | None:intergenic | 20.0% |
| !! | CAAATAAGATATATTAGATG+AGG | + | chr4.4:30983310-30983329 | None:intergenic | 20.0% |
| !! | CATAATGTAAAGATCTAATA+TGG | - | chr4.4:30983067-30983086 | MS.gene031565:intron | 20.0% |
| !! | GGTTTAAAGAATAAAAACAT+TGG | - | chr4.4:30984762-30984781 | MS.gene031565:intron | 20.0% |
| !! | TAAAGAATAAAAACATTGGT+AGG | - | chr4.4:30984766-30984785 | MS.gene031565:intron | 20.0% |
| !!! | ATTTTGTAGGTTGATAAAAA+TGG | - | chr4.4:30983775-30983794 | MS.gene031565:CDS | 20.0% |
| ! | AGAAAGAAGAAGAAATGTTT+GGG | - | chr4.4:30984627-30984646 | MS.gene031565:CDS | 25.0% |
| ! | AGAAGCAGTAATATTGATAA+GGG | - | chr4.4:30983434-30983453 | MS.gene031565:CDS | 25.0% |
| ! | ATATGCATCAATATATCCAT+GGG | - | chr4.4:30985392-30985411 | MS.gene031565:intron | 25.0% |
| ! | ATCTTAACTAGTTACATGTT+TGG | - | chr4.4:30985108-30985127 | MS.gene031565:intron | 25.0% |
| ! | CAAAATCAAGTACTAAGAAA+AGG | - | chr4.4:30984390-30984409 | MS.gene031565:CDS | 25.0% |
| ! | CAATTAAAATTGAACAGTCA+TGG | - | chr4.4:30982705-30982724 | MS.gene031565:CDS | 25.0% |
| ! | CATAGGAAAAATAATAAGCT+TGG | + | chr4.4:30985222-30985241 | None:intergenic | 25.0% |
| ! | TATAGATAGTGTTTATCCAA+TGG | - | chr4.4:30985689-30985708 | MS.gene031565:intron | 25.0% |
| ! | TATATTGATGCATATGATGA+TGG | + | chr4.4:30985387-30985406 | None:intergenic | 25.0% |
| ! | TGAATGATCATTTAATGATG+AGG | + | chr4.4:30985322-30985341 | None:intergenic | 25.0% |
| ! | TGATAAAAATGGTGATAATC+CGG | - | chr4.4:30983786-30983805 | MS.gene031565:CDS | 25.0% |
| ! | TGGTGTGTAATATAAAAAGT+TGG | + | chr4.4:30983119-30983138 | None:intergenic | 25.0% |
| ! | TTAAATCATATTAGTCGAGT+TGG | + | chr4.4:30982659-30982678 | None:intergenic | 25.0% |
| ! | TTCTAGTGATGAATAATCTT+CGG | + | chr4.4:30984109-30984128 | None:intergenic | 25.0% |
| !! | AATAGGATTGTAGATTTTCT+TGG | - | chr4.4:30985930-30985949 | MS.gene031565:CDS | 25.0% |
| !! | ATTGTAGATTTTCTTGGAAA+GGG | - | chr4.4:30985936-30985955 | MS.gene031565:CDS | 25.0% |
| !! | CTGCATTTTGTATTTCAAAT+AGG | - | chr4.4:30985913-30985932 | MS.gene031565:CDS | 25.0% |
| !! | CTTTTCTTAGTACTTGATTT+TGG | + | chr4.4:30984392-30984411 | None:intergenic | 25.0% |
| !! | TCATCTATTTGATTTATCAC+AGG | - | chr4.4:30985252-30985271 | MS.gene031565:intron | 25.0% |
| !! | TTAAGAAAGTGACATTTTGT+AGG | - | chr4.4:30983762-30983781 | MS.gene031565:CDS | 25.0% |
| !! | TTCTATAATTCCCTTTTCAA+GGG | + | chr4.4:30983881-30983900 | None:intergenic | 25.0% |
| !! | TTTCTATAATTCCCTTTTCA+AGG | + | chr4.4:30983882-30983901 | None:intergenic | 25.0% |
| !!! | TCAAGAATAGTTATTTTTGC+TGG | - | chr4.4:30984183-30984202 | MS.gene031565:CDS | 25.0% |
| AAACCACTAGAGATCATTAA+TGG | + | chr4.4:30984747-30984766 | None:intergenic | 30.0% | |
| AATCATTATTGTGGTTCATG+TGG | - | chr4.4:30984465-30984484 | MS.gene031565:intron | 30.0% | |
| ACTCAAAATGTTTGGTATAG+TGG | - | chr4.4:30982795-30982814 | MS.gene031565:CDS | 30.0% | |
| ATAACTTGGCACCAATAATA+TGG | + | chr4.4:30984906-30984925 | None:intergenic | 30.0% | |
| ATAATAAGAGACAAAGCAAG+TGG | - | chr4.4:30985477-30985496 | MS.gene031565:intron | 30.0% | |
| ATAATTGAGACACCATTACT+TGG | - | chr4.4:30985360-30985379 | MS.gene031565:intron | 30.0% | |
| ATACTCTAAGCTTTCAAAGA+GGG | + | chr4.4:30984304-30984323 | None:intergenic | 30.0% | |
| ATCACAGGTAAAATCTATGA+GGG | - | chr4.4:30985267-30985286 | MS.gene031565:intron | 30.0% | |
| ATGGACCAACAATATGAAAA+TGG | - | chr4.4:30984138-30984157 | MS.gene031565:CDS | 30.0% | |
| ATTATTGTGAGTGTACGAAA+TGG | + | chr4.4:30983708-30983727 | None:intergenic | 30.0% | |
| ATTTGAACACATGCAAACTA+TGG | - | chr4.4:30983280-30983299 | MS.gene031565:intron | 30.0% | |
| CAAACATTTCTTCTTCTTTC+TGG | + | chr4.4:30984628-30984647 | None:intergenic | 30.0% | |
| CAACAATCTCTATCTAACAA+AGG | - | chr4.4:30983928-30983947 | MS.gene031565:CDS | 30.0% | |
| CAACTTTATATTTGTACGAG+TGG | + | chr4.4:30985056-30985075 | None:intergenic | 30.0% | |
| CACAAAATGTGTTGAAAGAA+TGG | - | chr4.4:30984259-30984278 | MS.gene031565:CDS | 30.0% | |
| CACTCGTACAAATATAAAGT+TGG | - | chr4.4:30985054-30985073 | MS.gene031565:intron | 30.0% | |
| CAGAAAGAAGAAGAAATGTT+TGG | - | chr4.4:30984626-30984645 | MS.gene031565:CDS | 30.0% | |
| CAGAAGCAGTAATATTGATA+AGG | - | chr4.4:30983433-30983452 | MS.gene031565:CDS | 30.0% | |
| CATATGCATCAATATATCCA+TGG | - | chr4.4:30985391-30985410 | MS.gene031565:intron | 30.0% | |
| CGTGTCCAAAATTGTTAATT+TGG | + | chr4.4:30983144-30983163 | None:intergenic | 30.0% | |
| GAAGATTATTCATCACTAGA+AGG | - | chr4.4:30984108-30984127 | MS.gene031565:CDS | 30.0% | |
| GAATCAAAATCAGATCTCAA+AGG | - | chr4.4:30984834-30984853 | MS.gene031565:intron | 30.0% | |
| GAGAATAGCAAATACAAACA+TGG | - | chr4.4:30982260-30982279 | MS.gene031565:CDS | 30.0% | |
| GTTCAACATAGAAATAGTGT+TGG | - | chr4.4:30983183-30983202 | MS.gene031565:intron | 30.0% | |
| TAGATGAAAATACAGCTCAT+AGG | + | chr4.4:30985239-30985258 | None:intergenic | 30.0% | |
| TATACTTCTGCTCATCAAAT+GGG | - | chr4.4:30985747-30985766 | MS.gene031565:CDS | 30.0% | |
| TATCACAGGTAAAATCTATG+AGG | - | chr4.4:30985266-30985285 | MS.gene031565:intron | 30.0% | |
| TATTGATAAGGGTGATTCTA+TGG | - | chr4.4:30983445-30983464 | MS.gene031565:CDS | 30.0% | |
| TCGGAAAAACTCAAAATGTT+TGG | - | chr4.4:30982787-30982806 | MS.gene031565:CDS | 30.0% | |
| TCTAGTGATGAATAATCTTC+GGG | + | chr4.4:30984108-30984127 | None:intergenic | 30.0% | |
| TGATTATGATGAATCAAGCA+AGG | - | chr4.4:30982379-30982398 | MS.gene031565:CDS | 30.0% | |
| TTAATGATGAGGATACTTTG+TGG | + | chr4.4:30985311-30985330 | None:intergenic | 30.0% | |
| TTTGAACACATGCAAACTAT+GGG | - | chr4.4:30983281-30983300 | MS.gene031565:intron | 30.0% | |
| TTTGTGTTTGTTTGATATCG+CGG | + | chr4.4:30985188-30985207 | None:intergenic | 30.0% | |
| ! | AATTAACAATTTTGGACACG+AGG | - | chr4.4:30983144-30983163 | MS.gene031565:intron | 30.0% |
| ! | ATACAAACATGGATTTTCTG+TGG | - | chr4.4:30982271-30982290 | MS.gene031565:CDS | 30.0% |
| ! | ATTAACAATTTTGGACACGA+GGG | - | chr4.4:30983145-30983164 | MS.gene031565:intron | 30.0% |
| ! | CAACTTTTAAGCCAAGATTT+TGG | + | chr4.4:30984419-30984438 | None:intergenic | 30.0% |
| ! | CAATTTCTGCTTGTGTTTTT+AGG | - | chr4.4:30982854-30982873 | MS.gene031565:CDS | 30.0% |
| ! | CATTCTTTCAACACATTTTG+TGG | + | chr4.4:30984261-30984280 | None:intergenic | 30.0% |
| ! | CCAAAATTGTTAATTTGGCT+TGG | + | chr4.4:30983139-30983158 | None:intergenic | 30.0% |
| ! | CCAAGCCAAATTAACAATTT+TGG | - | chr4.4:30983136-30983155 | MS.gene031565:intron | 30.0% |
| ! | CCTTGCAAGTCAATTTTATA+TGG | - | chr4.4:30983034-30983053 | MS.gene031565:intron | 30.0% |
| ! | GATTGTAGATTTTCTTGGAA+AGG | - | chr4.4:30985935-30985954 | MS.gene031565:CDS | 30.0% |
| ! | TACCTCCATTTTCATATTGT+TGG | + | chr4.4:30984146-30984165 | None:intergenic | 30.0% |
| ! | TTGCATTCAGGAATTTCTTT+TGG | + | chr4.4:30982527-30982546 | None:intergenic | 30.0% |
| ! | TTTCTTCTTCTTTCTGGTAT+TGG | + | chr4.4:30984622-30984641 | None:intergenic | 30.0% |
| !! | AAAATTGACTTGCAAGGTAA+GGG | + | chr4.4:30983031-30983050 | None:intergenic | 30.0% |
| !! | AAAGTGATTGTTCTAGAGAA+AGG | - | chr4.4:30984069-30984088 | MS.gene031565:CDS | 30.0% |
| !! | CACTATTTCTATGTTGAACT+TGG | + | chr4.4:30983182-30983201 | None:intergenic | 30.0% |
| !! | CCATATAAAATTGACTTGCA+AGG | + | chr4.4:30983037-30983056 | None:intergenic | 30.0% |
| !! | TAAAATTGACTTGCAAGGTA+AGG | + | chr4.4:30983032-30983051 | None:intergenic | 30.0% |
| !! | TCTATAATTCCCTTTTCAAG+GGG | + | chr4.4:30983880-30983899 | None:intergenic | 30.0% |
| !!! | CCAAGTTATCACTGATTTTT+CGG | - | chr4.4:30984917-30984936 | MS.gene031565:intron | 30.0% |
| !!! | TGAGATCTGATTTTGATTCT+GGG | + | chr4.4:30984833-30984852 | None:intergenic | 30.0% |
| !!! | TTGAGATCTGATTTTGATTC+TGG | + | chr4.4:30984834-30984853 | None:intergenic | 30.0% |
| AAAAAGAGACCCCTTGAAAA+GGG | - | chr4.4:30983868-30983887 | MS.gene031565:CDS | 35.0% | |
| AAAGAGAAAAGATTGTGCAG+AGG | - | chr4.4:30983564-30983583 | MS.gene031565:CDS | 35.0% | |
| AAATGTGATGCAGTAGTTGT+TGG | - | chr4.4:30983994-30984013 | MS.gene031565:CDS | 35.0% | |
| AACGAAAATCGTACACAAGA+AGG | - | chr4.4:30984363-30984382 | MS.gene031565:CDS | 35.0% | |
| AACTTTAAACTTTCAGGCTC+TGG | + | chr4.4:30982834-30982853 | None:intergenic | 35.0% | |
| AAGAGAAAAGATTGTGCAGA+GGG | - | chr4.4:30983565-30983584 | MS.gene031565:CDS | 35.0% | |
| AAGTGGACAAGTAAAAACTG+AGG | - | chr4.4:30985494-30985513 | MS.gene031565:intron | 35.0% | |
| AGTGGACAAGTAAAAACTGA+GGG | - | chr4.4:30985495-30985514 | MS.gene031565:intron | 35.0% | |
| ATACTTCTGCTCATCAAATG+GGG | - | chr4.4:30985748-30985767 | MS.gene031565:CDS | 35.0% | |
| ATCTTGTCTGTCTTAGACTA+GGG | - | chr4.4:30982924-30982943 | MS.gene031565:intron | 35.0% | |
| CACAATGAAGCTACAAATTG+AGG | - | chr4.4:30984680-30984699 | MS.gene031565:CDS | 35.0% | |
| CAGAAATGTTGAAGAAAGAC+TGG | + | chr4.4:30982409-30982428 | None:intergenic | 35.0% | |
| CCGAAAAATCAGTGATAACT+TGG | + | chr4.4:30984920-30984939 | None:intergenic | 35.0% | |
| CTAGTTACATGTTTGGTACA+CGG | - | chr4.4:30985115-30985134 | MS.gene031565:intron | 35.0% | |
| CTTGAGAAGTTGTGGATAAA+TGG | + | chr4.4:30983530-30983549 | None:intergenic | 35.0% | |
| CTTGTAGATGCTGTTGAAAA+AGG | - | chr4.4:30984534-30984553 | MS.gene031565:CDS | 35.0% | |
| GACCAACAATATGAAAATGG+AGG | - | chr4.4:30984141-30984160 | MS.gene031565:CDS | 35.0% | |
| GATACTCTAAGCTTTCAAAG+AGG | + | chr4.4:30984305-30984324 | None:intergenic | 35.0% | |
| GATAGTGTTTATCCAATGGA+AGG | - | chr4.4:30985693-30985712 | MS.gene031565:intron | 35.0% | |
| GTATACTTCTGCTCATCAAA+TGG | - | chr4.4:30985746-30985765 | MS.gene031565:intron | 35.0% | |
| GTTGACTGAATAGTGATCAT+AGG | + | chr4.4:30985894-30985913 | None:intergenic | 35.0% | |
| TAATGAGAACACTAGCGAAA+AGG | - | chr4.4:30985653-30985672 | MS.gene031565:intron | 35.0% | |
| TACAAATTCCAATTCTCACC+TGG | + | chr4.4:30985729-30985748 | None:intergenic | 35.0% | |
| TACTCTAAGCTTTCAAAGAG+GGG | + | chr4.4:30984303-30984322 | None:intergenic | 35.0% | |
| TAGAATGGGAGTGAATGAAA+AGG | - | chr4.4:30985776-30985795 | MS.gene031565:CDS | 35.0% | |
| TATCTTGTCTGTCTTAGACT+AGG | - | chr4.4:30982923-30982942 | MS.gene031565:intron | 35.0% | |
| TATTGTGGTTCATGTGGTTA+TGG | - | chr4.4:30984471-30984490 | MS.gene031565:intron | 35.0% | |
| TCAATATATCCATGGGAATC+AGG | - | chr4.4:30985399-30985418 | MS.gene031565:intron | 35.0% | |
| TCATATTGTTGGTCCATTGA+AGG | + | chr4.4:30984135-30984154 | None:intergenic | 35.0% | |
| TCCACTAAAAGTTACTAGTC+AGG | + | chr4.4:30984964-30984983 | None:intergenic | 35.0% | |
| TCTAAATGTTCAATGCCAAC+AGG | - | chr4.4:30983380-30983399 | MS.gene031565:CDS | 35.0% | |
| TGATGAAAATGGTGAGAGTT+GGG | - | chr4.4:30985809-30985828 | MS.gene031565:CDS | 35.0% | |
| TGCTCTGTCTTAGTAAGAAA+TGG | - | chr4.4:30983504-30983523 | MS.gene031565:CDS | 35.0% | |
| TTGATGAAAATGGTGAGAGT+TGG | - | chr4.4:30985808-30985827 | MS.gene031565:CDS | 35.0% | |
| ! | ACCTGACTAGTAACTTTTAG+TGG | - | chr4.4:30984960-30984979 | MS.gene031565:intron | 35.0% |
| ! | AGAAGAAAACAAAGAGGCAT+AGG | + | chr4.4:30983646-30983665 | None:intergenic | 35.0% |
| ! | CTTAGAGTATCTATCTGCTA+TGG | - | chr4.4:30984314-30984333 | MS.gene031565:CDS | 35.0% |
| ! | GACTCTACTGTTTAAAGTCT+TGG | + | chr4.4:30984661-30984680 | None:intergenic | 35.0% |
| ! | GTGATTAAATGTGCTGTTCT+TGG | + | chr4.4:30985456-30985475 | None:intergenic | 35.0% |
| ! | TTAACAATTTTGGACACGAG+GGG | - | chr4.4:30983146-30983165 | MS.gene031565:intron | 35.0% |
| !! | CTGCATCACATTTGATTTTG+AGG | + | chr4.4:30983987-30984006 | None:intergenic | 35.0% |
| !! | TATGATGATGGTCCAAGTAA+TGG | + | chr4.4:30985375-30985394 | None:intergenic | 35.0% |
| !! | TCTCTAGAACAATCACTTTG+TGG | + | chr4.4:30984068-30984087 | None:intergenic | 35.0% |
| !!! | ATTTTTGCTGGTTCAACAGT+AGG | - | chr4.4:30984195-30984214 | MS.gene031565:CDS | 35.0% |
| !!! | CCTCTTTGTTTTCTTCTCTT+GGG | - | chr4.4:30983649-30983668 | MS.gene031565:CDS | 35.0% |
| !!! | TGCTTGTGTTTTTAGGAAAG+AGG | - | chr4.4:30982861-30982880 | MS.gene031565:CDS | 35.0% |
| AAAAAGTTGGCGACCCTAAA+CGG | + | chr4.4:30983106-30983125 | None:intergenic | 40.0% | |
| AAAATGGTGATAATCCGGCA+TGG | - | chr4.4:30983791-30983810 | MS.gene031565:CDS | 40.0% | |
| AAAGTGACAATTTCTGCAGG+TGG | - | chr4.4:30984705-30984724 | MS.gene031565:CDS | 40.0% | |
| AACAAGGGACTCAAGTTACA+TGG | - | chr4.4:30984511-30984530 | MS.gene031565:intron | 40.0% | |
| AAGACAAGCTTGAGAAGTTG+TGG | + | chr4.4:30983538-30983557 | None:intergenic | 40.0% | |
| AAGTGACAATTTCTGCAGGT+GGG | - | chr4.4:30984706-30984725 | MS.gene031565:CDS | 40.0% | |
| ACACACATATATACCTCGTC+AGG | + | chr4.4:30982449-30982468 | None:intergenic | 40.0% | |
| ACAGGTAAAATCTATGAGGG+AGG | - | chr4.4:30985270-30985289 | MS.gene031565:intron | 40.0% | |
| AGTTGTGTCATGTTCATGCA+TGG | + | chr4.4:30983905-30983924 | None:intergenic | 40.0% | |
| ATATATACCTCGTCAGGGAT+TGG | + | chr4.4:30982443-30982462 | None:intergenic | 40.0% | |
| ATCACTAGAAGGTCCTTCAA+TGG | - | chr4.4:30984119-30984138 | MS.gene031565:CDS | 40.0% | |
| ATGGGAGTGAATGAAAAGGA+AGG | - | chr4.4:30985780-30985799 | MS.gene031565:CDS | 40.0% | |
| ATGTGCCAAGAAATTCACCA+GGG | - | chr4.4:30984442-30984461 | MS.gene031565:intron | 40.0% | |
| ATGTTTGGTACACGGTGTAT+TGG | - | chr4.4:30985123-30985142 | MS.gene031565:intron | 40.0% | |
| ATTGGAGTGATATTCGAGTG+AGG | - | chr4.4:30985141-30985160 | MS.gene031565:intron | 40.0% | |
| CAAAAAGAGACCCCTTGAAA+AGG | - | chr4.4:30983867-30983886 | MS.gene031565:CDS | 40.0% | |
| CAAATGGGGAGTTGTAGAAT+GGG | - | chr4.4:30985762-30985781 | MS.gene031565:CDS | 40.0% | |
| CAACTTCTCAAGCTTGTCTT+TGG | - | chr4.4:30983538-30983557 | MS.gene031565:CDS | 40.0% | |
| CACACATATATACCTCGTCA+GGG | + | chr4.4:30982448-30982467 | None:intergenic | 40.0% | |
| CATCCTGTACTAATGACATG+GGG | - | chr4.4:30984801-30984820 | MS.gene031565:intron | 40.0% | |
| CCACCATTAATGATCTCTAG+TGG | - | chr4.4:30984741-30984760 | MS.gene031565:intron | 40.0% | |
| CCACTAGAGATCATTAATGG+TGG | + | chr4.4:30984744-30984763 | None:intergenic | 40.0% | |
| CCATCCTGTACTAATGACAT+GGG | - | chr4.4:30984800-30984819 | MS.gene031565:intron | 40.0% | |
| CCCAAGAGAAGAAAACAAAG+AGG | + | chr4.4:30983652-30983671 | None:intergenic | 40.0% | |
| CTGAGAATTCTAATAGCAGC+AGG | - | chr4.4:30985582-30985601 | MS.gene031565:intron | 40.0% | |
| GAAACTGTGTGTGAGAGAAT+TGG | - | chr4.4:30984336-30984355 | MS.gene031565:CDS | 40.0% | |
| GAACCACAATAATGATTCCC+TGG | + | chr4.4:30984462-30984481 | None:intergenic | 40.0% | |
| GATAGAGAGAATATGAGAGC+TGG | - | chr4.4:30985546-30985565 | MS.gene031565:intron | 40.0% | |
| GATTAGAGTCGATCCGTTTA+GGG | - | chr4.4:30983090-30983109 | MS.gene031565:intron | 40.0% | |
| GTCACTAACAAGCATATGTG+AGG | - | chr4.4:30982304-30982323 | MS.gene031565:CDS | 40.0% | |
| GTCCAAAAGGAGAGAAACAA+GGG | - | chr4.4:30984496-30984515 | MS.gene031565:intron | 40.0% | |
| GTGATTCTATGGCTTCAACA+AGG | - | chr4.4:30983456-30983475 | MS.gene031565:CDS | 40.0% | |
| GTTTGATATCGCGGTGAATT+TGG | + | chr4.4:30985179-30985198 | None:intergenic | 40.0% | |
| TAAGCGAATGCGAGTCTAAA+AGG | + | chr4.4:30983614-30983633 | None:intergenic | 40.0% | |
| TATCCCCATGTCATTAGTAC+AGG | + | chr4.4:30984807-30984826 | None:intergenic | 40.0% | |
| TATGTGCCAAGAAATTCACC+AGG | - | chr4.4:30984441-30984460 | MS.gene031565:intron | 40.0% | |
| TCAAATGGGGAGTTGTAGAA+TGG | - | chr4.4:30985761-30985780 | MS.gene031565:CDS | 40.0% | |
| TCACCAGGGAATCATTATTG+TGG | - | chr4.4:30984456-30984475 | MS.gene031565:intron | 40.0% | |
| TCCATCCTGTACTAATGACA+TGG | - | chr4.4:30984799-30984818 | MS.gene031565:intron | 40.0% | |
| TCTATGGCTTCAACAAGGTT+GGG | - | chr4.4:30983461-30983480 | MS.gene031565:CDS | 40.0% | |
| TGATTCCCTGGTGAATTTCT+TGG | + | chr4.4:30984450-30984469 | None:intergenic | 40.0% | |
| TGTACGAGTGGAAATGAACT+TGG | + | chr4.4:30985044-30985063 | None:intergenic | 40.0% | |
| TGTCCAAAAGGAGAGAAACA+AGG | - | chr4.4:30984495-30984514 | MS.gene031565:intron | 40.0% | |
| TGTGGTTATGGTTGTCCAAA+AGG | - | chr4.4:30984483-30984502 | MS.gene031565:intron | 40.0% | |
| TGTTGATACCTCATATCCGA+TGG | + | chr4.4:30983821-30983840 | None:intergenic | 40.0% | |
| TTCTATGGCTTCAACAAGGT+TGG | - | chr4.4:30983460-30983479 | MS.gene031565:CDS | 40.0% | |
| TTGAGTCAAGTGTGACATTG+AGG | + | chr4.4:30983954-30983973 | None:intergenic | 40.0% | |
| TTGGAGTGATATTCGAGTGA+GGG | - | chr4.4:30985142-30985161 | MS.gene031565:intron | 40.0% | |
| ! | ACCTGCAGAAATTGTCACTT+TGG | + | chr4.4:30984706-30984725 | None:intergenic | 40.0% |
| ! | ATGAGAGCTGGTTTACAACA+AGG | - | chr4.4:30985558-30985577 | MS.gene031565:intron | 40.0% |
| ! | GAAGAAATGTTTGGGAGTGT+TGG | - | chr4.4:30984635-30984654 | MS.gene031565:CDS | 40.0% |
| !! | AAAGGTGCTGTGATCATAAC+AGG | - | chr4.4:30984552-30984571 | MS.gene031565:CDS | 40.0% |
| !! | AGAAAAGGGTGCCAAAATCT+TGG | - | chr4.4:30984405-30984424 | MS.gene031565:intron | 40.0% |
| !! | CTTTTCAAGGGGTCTCTTTT+TGG | + | chr4.4:30983869-30983888 | None:intergenic | 40.0% |
| !! | GAAGGTGCTGTTGATGAAAA+TGG | - | chr4.4:30985798-30985817 | MS.gene031565:CDS | 40.0% |
| !! | TTGCTAAGAGCATCATCCAT+TGG | + | chr4.4:30982347-30982366 | None:intergenic | 40.0% |
| !! | TTGGGGACTTTGTTGATTTG+TGG | - | chr4.4:30983479-30983498 | MS.gene031565:CDS | 40.0% |
| !!! | GCCTCTTTGTTTTCTTCTCT+TGG | - | chr4.4:30983648-30983667 | MS.gene031565:CDS | 40.0% |
| AAACTGCTACGATGTGCAAG+TGG | - | chr4.4:30982548-30982567 | MS.gene031565:CDS | 45.0% | |
| AACTGCTACGATGTGCAAGT+GGG | - | chr4.4:30982549-30982568 | MS.gene031565:CDS | 45.0% | |
| AAGTCAAGTCCTGATTCCCA+TGG | + | chr4.4:30985411-30985430 | None:intergenic | 45.0% | |
| AGTGACAATTTCTGCAGGTG+GGG | - | chr4.4:30984707-30984726 | MS.gene031565:CDS | 45.0% | |
| ATGCGAGTCTAAAAGGAGTG+AGG | + | chr4.4:30983607-30983626 | None:intergenic | 45.0% | |
| ATGGAAAGCCATCGGATATG+AGG | - | chr4.4:30983810-30983829 | MS.gene031565:CDS | 45.0% | |
| CATTGTCACCAGGTGAGAAT+TGG | - | chr4.4:30985718-30985737 | MS.gene031565:intron | 45.0% | |
| CCCATGTCATTAGTACAGGA+TGG | + | chr4.4:30984803-30984822 | None:intergenic | 45.0% | |
| CGTAGCAGTTTCTTGCATTC+AGG | + | chr4.4:30982539-30982558 | None:intergenic | 45.0% | |
| CTAACATCTCAGCAACCTGT+TGG | + | chr4.4:30983398-30983417 | None:intergenic | 45.0% | |
| CTATGGCTTCAACAAGGTTG+GGG | - | chr4.4:30983462-30983481 | MS.gene031565:CDS | 45.0% | |
| CTTTGTGGCCTGCATTTGAA+AGG | + | chr4.4:30984053-30984072 | None:intergenic | 45.0% | |
| GAGTGTCATCCATTGTTGAG+TGG | - | chr4.4:30982230-30982249 | MS.gene031565:CDS | 45.0% | |
| GCATCATCCATTGGCAATGA+AGG | + | chr4.4:30982338-30982357 | None:intergenic | 45.0% | |
| GCCAAAGTGACAATTTCTGC+AGG | - | chr4.4:30984702-30984721 | MS.gene031565:CDS | 45.0% | |
| GCTGAGATGTTAGTGAAGAG+TGG | - | chr4.4:30983405-30983424 | MS.gene031565:CDS | 45.0% | |
| GCTTCTGTCCTTTCAAATGC+AGG | - | chr4.4:30984042-30984061 | MS.gene031565:CDS | 45.0% | |
| GGATTAACACCAACAGCAGT+TGG | + | chr4.4:30985873-30985892 | None:intergenic | 45.0% | |
| GGATTAGAGTCGATCCGTTT+AGG | - | chr4.4:30983089-30983108 | MS.gene031565:intron | 45.0% | |
| GTAGGAACACACAGAAGTGA+TGG | - | chr4.4:30985615-30985634 | MS.gene031565:intron | 45.0% | |
| GTGGTGGTTCAGCTGTTAAT+TGG | - | chr4.4:30984217-30984236 | MS.gene031565:CDS | 45.0% | |
| TATGTATCCAATCCCTGACG+AGG | - | chr4.4:30982433-30982452 | MS.gene031565:CDS | 45.0% | |
| TCTCTCACACCACTCAACAA+TGG | + | chr4.4:30982242-30982261 | None:intergenic | 45.0% | |
| TGGAGTGATATTCGAGTGAG+GGG | - | chr4.4:30985143-30985162 | MS.gene031565:intron | 45.0% | |
| TGTGTTGCCTTCATTGCCAA+TGG | - | chr4.4:30982328-30982347 | MS.gene031565:CDS | 45.0% | |
| ! | AGTTTGAGACTTGCGAATGG+TGG | + | chr4.4:30985001-30985020 | None:intergenic | 45.0% |
| ! | TCGAGTTTGAGACTTGCGAA+TGG | + | chr4.4:30985004-30985023 | None:intergenic | 45.0% |
| !! | GATGCAGTAGTTGTTGGTTC+TGG | - | chr4.4:30984000-30984019 | MS.gene031565:CDS | 45.0% |
| !! | GTCCCTTGTTTCTCTCCTTT+TGG | + | chr4.4:30984501-30984520 | None:intergenic | 45.0% |
| !! | TTTGCTGGTTCAACAGTAGG+TGG | - | chr4.4:30984198-30984217 | MS.gene031565:CDS | 45.0% |
| !!! | GGGTCTCTTTTTGGTGTCAT+TGG | + | chr4.4:30983860-30983879 | None:intergenic | 45.0% |
| !!! | TTTAATTTTTATAATCATAT+TGG | + | chr4.4:30982758-30982777 | None:intergenic | 5.0% |
| AATCCGGCATGGAAAGCCAT+CGG | - | chr4.4:30983802-30983821 | MS.gene031565:CDS | 50.0% | |
| ACCCACACTTAGGTTCCATG+TGG | - | chr4.4:30982576-30982595 | MS.gene031565:CDS | 50.0% | |
| AGCCACATGGAACCTAAGTG+TGG | + | chr4.4:30982581-30982600 | None:intergenic | 50.0% | |
| AGTGTGCTTCCAACTGCTGT+TGG | - | chr4.4:30985861-30985880 | MS.gene031565:CDS | 50.0% | |
| ATGTGGCTGCGTTGTGCATT+CGG | - | chr4.4:30982593-30982612 | MS.gene031565:CDS | 50.0% | |
| GAGACTTGCGAATGGTGGTT+GGG | + | chr4.4:30984996-30985015 | None:intergenic | 50.0% | |
| GCCACATGGAACCTAAGTGT+GGG | + | chr4.4:30982580-30982599 | None:intergenic | 50.0% | |
| GGTGACAATGCTCCTTCCAT+TGG | + | chr4.4:30985708-30985727 | None:intergenic | 50.0% | |
| GTGAGAGTTGGGAAGCTGAA+GGG | - | chr4.4:30985820-30985839 | MS.gene031565:CDS | 50.0% | |
| TATCCGATGGCTTTCCATGC+CGG | + | chr4.4:30983808-30983827 | None:intergenic | 50.0% | |
| TGAGACTTGCGAATGGTGGT+TGG | + | chr4.4:30984997-30985016 | None:intergenic | 50.0% | |
| ! | CGTTGTGCATTCGGTGAAGT+TGG | - | chr4.4:30982602-30982621 | MS.gene031565:CDS | 50.0% |
| !! | ATGGAAGGAGCATTGTCACC+AGG | - | chr4.4:30985708-30985727 | MS.gene031565:intron | 50.0% |
| !! | GTAGTTGTTGGTTCTGGCTG+TGG | - | chr4.4:30984006-30984025 | MS.gene031565:CDS | 50.0% |
| ACTTGCGAATGGTGGTTGGG+AGG | + | chr4.4:30984993-30985012 | None:intergenic | 55.0% | |
| CGAAATGGCACGTTGCAGCA+AGG | + | chr4.4:30983693-30983712 | None:intergenic | 55.0% | |
| CTTGCGAATGGTGGTTGGGA+GGG | + | chr4.4:30984992-30985011 | None:intergenic | 55.0% | |
| GAATGCACAACGCAGCCACA+TGG | + | chr4.4:30982594-30982613 | None:intergenic | 55.0% | |
| GCAGCAGGAGCTGTTGAAGT+AGG | - | chr4.4:30985597-30985616 | MS.gene031565:intron | 55.0% | |
| GCTACGATGTGCAAGTGGGT+GGG | - | chr4.4:30982553-30982572 | MS.gene031565:CDS | 55.0% | |
| GGTGAGAGTTGGGAAGCTGA+AGG | - | chr4.4:30985819-30985838 | MS.gene031565:CDS | 55.0% | |
| TGCAGAGGGCTCTCAAGCTT+AGG | - | chr4.4:30983579-30983598 | MS.gene031565:CDS | 55.0% | |
| TGCTACGATGTGCAAGTGGG+TGG | - | chr4.4:30982552-30982571 | MS.gene031565:CDS | 55.0% | |
| ! | GCTGGTTCAACAGTAGGTGG+TGG | - | chr4.4:30984201-30984220 | MS.gene031565:CDS | 55.0% |
| !! | GTTGTTGGTTCTGGCTGTGG+AGG | - | chr4.4:30984009-30984028 | MS.gene031565:CDS | 55.0% |
| AGTGGGTGGGACCCACACTT+AGG | - | chr4.4:30982566-30982585 | MS.gene031565:CDS | 60.0% | |
| !! | GTTGGTTCTGGCTGTGGAGG+AGG | - | chr4.4:30984012-30984031 | MS.gene031565:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 30982221 | 30985980 | 30982221 | ID=MS.gene031565 |
| chr4.4 | mRNA | 30982221 | 30985980 | 30982221 | ID=MS.gene031565.t1;Parent=MS.gene031565 |
| chr4.4 | exon | 30985747 | 30985980 | 30985747 | ID=MS.gene031565.t1.exon1;Parent=MS.gene031565.t1 |
| chr4.4 | CDS | 30985747 | 30985980 | 30985747 | ID=cds.MS.gene031565.t1;Parent=MS.gene031565.t1 |
| chr4.4 | exon | 30984531 | 30984746 | 30984531 | ID=MS.gene031565.t1.exon2;Parent=MS.gene031565.t1 |
| chr4.4 | CDS | 30984531 | 30984746 | 30984531 | ID=cds.MS.gene031565.t1;Parent=MS.gene031565.t1 |
| chr4.4 | exon | 30983346 | 30984417 | 30983346 | ID=MS.gene031565.t1.exon3;Parent=MS.gene031565.t1 |
| chr4.4 | CDS | 30983346 | 30984417 | 30983346 | ID=cds.MS.gene031565.t1;Parent=MS.gene031565.t1 |
| chr4.4 | exon | 30982221 | 30982927 | 30982221 | ID=MS.gene031565.t1.exon4;Parent=MS.gene031565.t1 |
| chr4.4 | CDS | 30982221 | 30982927 | 30982221 | ID=cds.MS.gene031565.t1;Parent=MS.gene031565.t1 |
| Gene Sequence |
| Protein sequence |
