Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031651.t1 | XP_003607535.1 | 98.7 | 678 | 9 | 0 | 1 | 678 | 1 | 678 | 0.00E+00 | 1352.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031651.t1 | P0CZ23 | 72.0 | 676 | 186 | 2 | 1 | 675 | 1 | 674 | 1.9e-297 | 1022.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031651.t1 | G7JUZ2 | 98.7 | 678 | 9 | 0 | 1 | 678 | 1 | 678 | 0.0e+00 | 1352.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031651 | MS.gene011553 | PPI |
| MS.gene031651 | MS.gene57427 | PPI |
| MS.gene031651 | MS.gene006655 | PPI |
| MS.gene031651 | MS.gene61306 | PPI |
| MS.gene031651 | MS.gene045541 | PPI |
| MS.gene031651 | MS.gene030781 | PPI |
| MS.gene031651 | MS.gene73859 | PPI |
| MS.gene031651 | MS.gene045536 | PPI |
| MS.gene031651 | MS.gene071513 | PPI |
| MS.gene031651 | MS.gene71970 | PPI |
| MS.gene031651 | MS.gene21220 | PPI |
| MS.gene031651 | MS.gene09756 | PPI |
| MS.gene031651 | MS.gene071514 | PPI |
| MS.gene031651 | MS.gene71971 | PPI |
| MS.gene031651 | MS.gene045538 | PPI |
| MS.gene031651 | MS.gene015408 | PPI |
| MS.gene031651 | MS.gene72596 | PPI |
| MS.gene031651 | MS.gene28100 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031651.t1 | MTR_4g079290 | 98.673 | 678 | 9 | 0 | 1 | 678 | 1 | 678 | 0.0 | 1396 |
| MS.gene031651.t1 | MTR_8g090375 | 36.893 | 618 | 343 | 14 | 82 | 664 | 68 | 673 | 8.18e-119 | 370 |
| MS.gene031651.t1 | MTR_5g012920 | 30.996 | 542 | 318 | 14 | 153 | 663 | 101 | 617 | 7.61e-74 | 251 |
| MS.gene031651.t1 | MTR_4g100640 | 29.490 | 529 | 336 | 13 | 158 | 663 | 103 | 617 | 1.93e-67 | 234 |
| MS.gene031651.t1 | MTR_4g100640 | 33.994 | 353 | 215 | 7 | 158 | 496 | 103 | 451 | 9.65e-59 | 207 |
| MS.gene031651.t1 | MTR_6g464330 | 91.803 | 61 | 5 | 0 | 73 | 133 | 1 | 61 | 2.13e-33 | 122 |
| MS.gene031651.t1 | MTR_2g033680 | 87.805 | 41 | 5 | 0 | 107 | 147 | 3 | 43 | 4.67e-18 | 79.7 |
| MS.gene031651.t1 | MTR_7g068850 | 22.788 | 373 | 240 | 12 | 100 | 470 | 79 | 405 | 1.11e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031651.t1 | AT1G06290 | 71.935 | 677 | 187 | 2 | 1 | 676 | 1 | 675 | 0.0 | 1057 |
| MS.gene031651.t1 | AT1G06310 | 69.379 | 676 | 204 | 2 | 1 | 675 | 1 | 674 | 0.0 | 1014 |
| MS.gene031651.t1 | AT5G65110 | 37.851 | 605 | 334 | 14 | 97 | 674 | 95 | 684 | 1.92e-118 | 370 |
| MS.gene031651.t1 | AT5G65110 | 38.750 | 560 | 305 | 12 | 97 | 630 | 95 | 642 | 2.23e-113 | 355 |
| MS.gene031651.t1 | AT3G06690 | 65.269 | 167 | 58 | 0 | 510 | 676 | 21 | 187 | 3.92e-75 | 239 |
| MS.gene031651.t1 | AT4G16760 | 31.061 | 528 | 329 | 13 | 158 | 663 | 90 | 604 | 4.62e-68 | 235 |
| MS.gene031651.t1 | AT4G16760 | 30.755 | 530 | 335 | 12 | 153 | 663 | 101 | 617 | 4.97e-68 | 235 |
| MS.gene031651.t1 | AT2G35690 | 29.050 | 537 | 339 | 12 | 151 | 663 | 99 | 617 | 7.02e-64 | 224 |
Find 174 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCAGCTATTCGGATATT+TGG | 0.062882 | 4.3:-29852627 | None:intergenic |
| AAACCGTATTGGTCAATTTA+AGG | 0.139356 | 4.3:+29853963 | MS.gene031651:CDS |
| ATGACAAACTCACCAGAATT+TGG | 0.201015 | 4.3:-29852319 | None:intergenic |
| GGTCACAAAATTGGTTTAAA+TGG | 0.204440 | 4.3:+29852651 | MS.gene031651:CDS |
| CATCAAGAGCAGTGAATTTC+AGG | 0.216438 | 4.3:+29855243 | MS.gene031651:CDS |
| GCTGAATGTGGTCACAAAAT+TGG | 0.219965 | 4.3:+29852642 | MS.gene031651:CDS |
| GGGTGGGGCTGTAAAGTTTC+TGG | 0.235532 | 4.3:+29852064 | MS.gene031651:CDS |
| GACGCTGCCTTTCTTCGATA+TGG | 0.236909 | 4.3:+29855822 | MS.gene031651:CDS |
| TTGGCTCTTCATGAGGTTAT+TGG | 0.237880 | 4.3:+29851349 | MS.gene031651:CDS |
| AGCAATACTGAAAACATTTA+TGG | 0.246846 | 4.3:+29855582 | MS.gene031651:CDS |
| AACAAACCATTTAAAGGTCT+TGG | 0.280881 | 4.3:+29855163 | MS.gene031651:CDS |
| TTCCATCTGAATCCCTGATT+TGG | 0.280970 | 4.3:-29852596 | None:intergenic |
| TCTAATCCAAGACCTTTAAA+TGG | 0.282466 | 4.3:-29855169 | None:intergenic |
| TCTCCTCTGCAGGATGTCTT+AGG | 0.292318 | 4.3:+29855759 | MS.gene031651:intron |
| CAAATACGCAATTCGTTTCA+TGG | 0.303772 | 4.3:-29851263 | None:intergenic |
| TCAATAGGTCTCGCTCTCTT+AGG | 0.305094 | 4.3:-29855367 | None:intergenic |
| CTGAAATTCACTGCTCTTGA+TGG | 0.308244 | 4.3:-29855242 | None:intergenic |
| CTTGCCTTGGTTAACTCCTT+TGG | 0.312555 | 4.3:+29855921 | MS.gene031651:CDS |
| GAATAATATGCGTACTCTTC+AGG | 0.319191 | 4.3:+29853811 | MS.gene031651:CDS |
| TGGATTTGATTCGGAGAGTT+CGG | 0.330563 | 4.3:-29851065 | None:intergenic |
| ATTCAGCTATTCGGATATTT+GGG | 0.337889 | 4.3:-29852626 | None:intergenic |
| GGTTTAAATGGAGTTGATAA+TGG | 0.338212 | 4.3:+29852663 | MS.gene031651:CDS |
| GAAGATCGCGACTGGCTATT+CGG | 0.342629 | 4.3:+29851139 | MS.gene031651:CDS |
| TCCATCTGAATCCCTGATTT+GGG | 0.353613 | 4.3:-29852595 | None:intergenic |
| TGAGCCCTATTGCATACAAC+TGG | 0.357438 | 4.3:+29855961 | MS.gene031651:CDS |
| CTTTGAGATGCGAAAGCTCT+TGG | 0.365539 | 4.3:+29851102 | MS.gene031651:CDS |
| GGAATTTAACAAATTCTCTC+TGG | 0.369490 | 4.3:-29852812 | None:intergenic |
| GGATTTGATTCGGAGAGTTC+GGG | 0.370117 | 4.3:-29851064 | None:intergenic |
| TGTGACCACATTCAGCTATT+CGG | 0.372695 | 4.3:-29852635 | None:intergenic |
| GAAACGAATTGCGTATTTGT+TGG | 0.373037 | 4.3:+29851267 | MS.gene031651:CDS |
| CAACATAAACGGAAGCAATC+AGG | 0.373818 | 4.3:+29852554 | MS.gene031651:CDS |
| TTATCAGCTTGCTGAGGACT+TGG | 0.379509 | 4.3:+29855540 | MS.gene031651:CDS |
| AACCGTATTGGTCAATTTAA+GGG | 0.379544 | 4.3:+29853964 | MS.gene031651:CDS |
| TGGGTCGTGGCGGAGGTGAT+TGG | 0.379947 | 4.3:-29850990 | None:intergenic |
| TTCTTAGCCCCTTTGACCTC+TGG | 0.384312 | 4.3:+29853015 | MS.gene031651:CDS |
| TGGAGGATTGTTGGTGCGGT+TGG | 0.385269 | 4.3:-29851013 | None:intergenic |
| TCCATGGACTGATTATAATC+AGG | 0.392905 | 4.3:-29851223 | None:intergenic |
| TCAACCCAGTTGTATGCAAT+AGG | 0.394427 | 4.3:-29855966 | None:intergenic |
| AACTTCCTCAACTCTTCTTG+TGG | 0.399283 | 4.3:-29851328 | None:intergenic |
| GAGTTGATAATGGCCGTATC+TGG | 0.403465 | 4.3:+29852673 | MS.gene031651:CDS |
| AAGATCGCGACTGGCTATTC+GGG | 0.408048 | 4.3:+29851140 | MS.gene031651:CDS |
| ACTGGGTTGAGTCAAATTCT+TGG | 0.409758 | 4.3:+29855979 | MS.gene031651:CDS |
| GCTCTTGGACGGTCACAATC+TGG | 0.413012 | 4.3:+29851117 | MS.gene031651:CDS |
| CATCTCCCTCTGTTGTTCCA+TGG | 0.413358 | 4.3:-29851239 | None:intergenic |
| CGAAGTTCAGCACATAGCTT+TGG | 0.414228 | 4.3:-29855888 | None:intergenic |
| AGTAAAACCTCAGGCCCATT+TGG | 0.419355 | 4.3:-29853255 | None:intergenic |
| ACTACTTATGATCCAAATTC+TGG | 0.419459 | 4.3:+29852307 | MS.gene031651:CDS |
| AGGATTGTTGGTGCGGTTGG+TGG | 0.420230 | 4.3:-29851010 | None:intergenic |
| CATTCTCTTGCTGTTAAGCT+TGG | 0.432008 | 4.3:+29851382 | MS.gene031651:CDS |
| CCGTGAAGCATGTGGAGGAC+AGG | 0.433137 | 4.3:+29853927 | MS.gene031651:CDS |
| GGATTGTTGGTGCGGTTGGT+GGG | 0.435760 | 4.3:-29851009 | None:intergenic |
| ATGATTTACCTTCAATGAAC+CGG | 0.436593 | 4.3:-29855626 | None:intergenic |
| ACTTCCTCAACTCTTCTTGT+GGG | 0.444218 | 4.3:-29851327 | None:intergenic |
| CTATAGCAAAACGTTTCAAT+AGG | 0.454415 | 4.3:-29855382 | None:intergenic |
| CACCCTTAAATTGACCAATA+CGG | 0.463490 | 4.3:-29853966 | None:intergenic |
| CGGTTGGTGGGTCGTGGCGG+AGG | 0.463795 | 4.3:-29850997 | None:intergenic |
| CGTGGGTGGCTTACTGGTGA+TGG | 0.467490 | 4.3:+29851304 | MS.gene031651:CDS |
| GAATGTTGTTGGATTTGATT+CGG | 0.467551 | 4.3:-29851074 | None:intergenic |
| CCACTTGTCATGGTGACGCT+TGG | 0.472168 | 4.3:-29852090 | None:intergenic |
| ACCGGCGGGAAGTCGACGGC+AGG | 0.473101 | 4.3:+29851188 | MS.gene031651:CDS |
| GTAGAACTTGTTAACTGAGA+TGG | 0.473386 | 4.3:-29855220 | None:intergenic |
| CCTGTCCTCCACATGCTTCA+CGG | 0.473869 | 4.3:-29853927 | None:intergenic |
| TATTGTTTCTAGTGCATACA+AGG | 0.474725 | 4.3:+29853775 | MS.gene031651:CDS |
| TTGGTGCGGTTGGTGGGTCG+TGG | 0.475082 | 4.3:-29851003 | None:intergenic |
| TGACGTGCATTCAACATTTG+AGG | 0.475703 | 4.3:+29853993 | MS.gene031651:CDS |
| GCTATGTCTGAGTTGGGCCA+TGG | 0.475827 | 4.3:+29852152 | MS.gene031651:CDS |
| TCAAAGGTGTCGAATGTTGT+TGG | 0.478788 | 4.3:-29851085 | None:intergenic |
| CCCATTTGGTGTAATAGAAA+AGG | 0.481194 | 4.3:-29853241 | None:intergenic |
| TTTACCAGCCGGTTCATTGA+AGG | 0.481975 | 4.3:+29855618 | MS.gene031651:CDS |
| AATAGACGTTGTTGATGACT+TGG | 0.483886 | 4.3:-29853288 | None:intergenic |
| TTACACGACCAGAGGTCAAA+GGG | 0.484386 | 4.3:-29853023 | None:intergenic |
| GTGAGTCAGCTCAGAAGTAT+TGG | 0.488256 | 4.3:+29852353 | MS.gene031651:CDS |
| AACATAAACGGAAGCAATCA+GGG | 0.488638 | 4.3:+29852555 | MS.gene031651:CDS |
| TGAATTGCTTTGTTTGACTC+AGG | 0.494253 | 4.3:-29853752 | None:intergenic |
| AATGTATATATTACCAGATA+CGG | 0.501138 | 4.3:-29852686 | None:intergenic |
| CAACCCAGTTGTATGCAATA+GGG | 0.501421 | 4.3:-29855965 | None:intergenic |
| TACTGAAAACTATGACATCA+AGG | 0.503788 | 4.3:+29852121 | MS.gene031651:CDS |
| GGTGAGGATGGTGGTTCGCC+AGG | 0.507157 | 4.3:-29850969 | None:intergenic |
| GCGTAGTTGTGGAGGATTGT+TGG | 0.509249 | 4.3:-29851022 | None:intergenic |
| ACTTACATCTTCGCAAGTAA+AGG | 0.511759 | 4.3:-29853312 | None:intergenic |
| TACAGAGCGGACTATTCAAC+CGG | 0.511916 | 4.3:+29851170 | MS.gene031651:CDS |
| TGGACAACAACCGCATCACC+TGG | 0.515189 | 4.3:+29850951 | MS.gene031651:CDS |
| GTCAAAACTGAAAACCGTAT+TGG | 0.515495 | 4.3:+29853952 | MS.gene031651:CDS |
| GCGGAGGTGATTGGTGAGGA+TGG | 0.515660 | 4.3:-29850981 | None:intergenic |
| GACGTGCATTCAACATTTGA+GGG | 0.516195 | 4.3:+29853994 | MS.gene031651:CDS |
| AGCTAAGGCAAGCGTAGTTG+TGG | 0.516903 | 4.3:-29851033 | None:intergenic |
| CTATGTCTGAGTTGGGCCAT+GGG | 0.517623 | 4.3:+29852153 | MS.gene031651:CDS |
| TCGACCGCATGCACTTGCCT+TGG | 0.518895 | 4.3:+29855908 | MS.gene031651:CDS |
| GAATTTAACAAATTCTCTCT+GGG | 0.518948 | 4.3:-29852811 | None:intergenic |
| GGTGGGGCTGTAAAGTTTCT+GGG | 0.520924 | 4.3:+29852065 | MS.gene031651:CDS |
| TAGTGACAGTTTCAATTCCT+CGG | 0.521777 | 4.3:-29852288 | None:intergenic |
| CAAGTATCCATATCGAAGAA+AGG | 0.523422 | 4.3:-29855829 | None:intergenic |
| ACAAGAAGAGTTGAGGAAGT+TGG | 0.529170 | 4.3:+29851330 | MS.gene031651:CDS |
| GGTGATGCGGTTGTTGTCCA+TGG | 0.532757 | 4.3:-29850948 | None:intergenic |
| GTTCGGGAGGAGAGTAGCTA+AGG | 0.534113 | 4.3:-29851048 | None:intergenic |
| AGAGAATTTGTTAAATTCCG+TGG | 0.536973 | 4.3:+29852816 | MS.gene031651:CDS |
| TAGAGTCCTCACTAGAATGA+AGG | 0.537714 | 4.3:-29855447 | None:intergenic |
| ATTAATGGATTTCAGGGGTG+GGG | 0.544312 | 4.3:+29852049 | MS.gene031651:intron |
| GTCTTCGTCCACACTAATCA+AGG | 0.553624 | 4.3:-29855802 | None:intergenic |
| TATCAGCTTGCTGAGGACTT+GGG | 0.556480 | 4.3:+29855541 | MS.gene031651:CDS |
| AAGATATGCATTGACAAGGC+GGG | 0.561218 | 4.3:+29853218 | MS.gene031651:CDS |
| TAATCAAGCAGTAAAACCTC+AGG | 0.564610 | 4.3:-29853264 | None:intergenic |
| GCTGAGTCAGCTTTACCAGC+CGG | 0.565138 | 4.3:+29855607 | MS.gene031651:CDS |
| CGTGAAGCATGTGGAGGACA+GGG | 0.565627 | 4.3:+29853928 | MS.gene031651:CDS |
| GCACTCAAGTATTCACCACT+TGG | 0.565645 | 4.3:-29852850 | None:intergenic |
| ATAGGTCTCGCTCTCTTAGG+TGG | 0.569715 | 4.3:-29855364 | None:intergenic |
| TAGCTCTCAGCCACTTGTCA+TGG | 0.571188 | 4.3:-29852100 | None:intergenic |
| GTTAACTGAGATGGGATGAC+AGG | 0.572425 | 4.3:-29855211 | None:intergenic |
| CAGAAAATGCTTCTGTAGTG+AGG | 0.573670 | 4.3:+29855856 | MS.gene031651:CDS |
| GTTATATGCCTTGATTAGTG+TGG | 0.574945 | 4.3:+29855794 | MS.gene031651:CDS |
| CAACAATGTTCTGATGCAGC+AGG | 0.578536 | 4.3:+29854020 | MS.gene031651:CDS |
| ACTTGGTGAAACGTCGGCCA+CGG | 0.579741 | 4.3:-29852833 | None:intergenic |
| GAGGAAGTTGGCTCTTCATG+AGG | 0.581295 | 4.3:+29851342 | MS.gene031651:CDS |
| GTGCGGTTGGTGGGTCGTGG+CGG | 0.581343 | 4.3:-29851000 | None:intergenic |
| GTTTCAGAACATCAATCTCA+AGG | 0.581478 | 4.3:+29855407 | MS.gene031651:CDS |
| TTTACCTTCAATGAACCGGC+TGG | 0.583384 | 4.3:-29855622 | None:intergenic |
| TTGGTGTTCATATCTTCTTG+TGG | 0.583806 | 4.3:+29851401 | MS.gene031651:CDS |
| GTTACACGACCAGAGGTCAA+AGG | 0.585021 | 4.3:-29853024 | None:intergenic |
| CAGTTCTGTTTACATCTCCA+AGG | 0.586786 | 4.3:+29853056 | MS.gene031651:CDS |
| TCCTGATTATAATCAGTCCA+TGG | 0.588638 | 4.3:+29851222 | MS.gene031651:CDS |
| CAATGCATATCTTATAGCAA+TGG | 0.589002 | 4.3:-29853208 | None:intergenic |
| CAAGAGCTTTCGCATCTCAA+AGG | 0.592095 | 4.3:-29851101 | None:intergenic |
| TAGAACTTGTTAACTGAGAT+GGG | 0.593873 | 4.3:-29855219 | None:intergenic |
| TTCAACCGGCGGGAAGTCGA+CGG | 0.594950 | 4.3:+29851184 | MS.gene031651:CDS |
| GAGATGCGAAAGCTCTTGGA+CGG | 0.595446 | 4.3:+29851106 | MS.gene031651:CDS |
| ACAATCTGGAAGATCGCGAC+TGG | 0.598438 | 4.3:+29851131 | MS.gene031651:CDS |
| GAGCGGACTATTCAACCGGC+GGG | 0.599185 | 4.3:+29851174 | MS.gene031651:CDS |
| ATAGACGTTGTTGATGACTT+GGG | 0.603339 | 4.3:-29853287 | None:intergenic |
| GTGGCCGACGTTTCACCAAG+TGG | 0.604648 | 4.3:+29852835 | MS.gene031651:CDS |
| TGGTGGTTCGCCAGGTGATG+CGG | 0.609405 | 4.3:-29850961 | None:intergenic |
| TATTACACCAAATGGGCCTG+AGG | 0.613456 | 4.3:+29853248 | MS.gene031651:CDS |
| CAGGAATGCCGTGAAGCATG+TGG | 0.614384 | 4.3:+29853919 | MS.gene031651:intron |
| TCAGTCCATGGAACAACAGA+GGG | 0.615909 | 4.3:+29851234 | MS.gene031651:CDS |
| GAGCCCTATTGCATACAACT+GGG | 0.618903 | 4.3:+29855962 | MS.gene031651:CDS |
| GAGGTGATTGGTGAGGATGG+TGG | 0.620258 | 4.3:-29850978 | None:intergenic |
| GCCCAAATCAGGGATTCAGA+TGG | 0.621638 | 4.3:+29852594 | MS.gene031651:CDS |
| TAAGGCAAGCGTAGTTGTGG+AGG | 0.621691 | 4.3:-29851030 | None:intergenic |
| CCGGCGGGAAGTCGACGGCA+GGG | 0.623639 | 4.3:+29851189 | MS.gene031651:CDS |
| ATGGCCCACAAGAAGAGTTG+AGG | 0.628054 | 4.3:+29851323 | MS.gene031651:CDS |
| CCCTGCCGTCGACTTCCCGC+CGG | 0.629419 | 4.3:-29851189 | None:intergenic |
| CTATAAGATATGCATTGACA+AGG | 0.632074 | 4.3:+29853214 | MS.gene031651:CDS |
| TCAATCTCAAGGAAATAGCA+AGG | 0.632456 | 4.3:+29855418 | MS.gene031651:CDS |
| TACTTCTGAGCTGACTCACA+CGG | 0.633462 | 4.3:-29852349 | None:intergenic |
| ATTGCGTATTTGTTGGATCG+TGG | 0.635615 | 4.3:+29851274 | MS.gene031651:CDS |
| CCAAGCGTCACCATGACAAG+TGG | 0.636792 | 4.3:+29852090 | MS.gene031651:CDS |
| CTTCACATACATTACTCCCA+TGG | 0.638446 | 4.3:-29852169 | None:intergenic |
| GCTCAGAAGTATTGGATCGG+TGG | 0.639509 | 4.3:+29852361 | MS.gene031651:CDS |
| CATTTCACTTCAGATAAGCA+AGG | 0.640547 | 4.3:+29855105 | MS.gene031651:intron |
| AATACTGAAAACATTTATGG+AGG | 0.640785 | 4.3:+29855585 | MS.gene031651:CDS |
| ACTGAAAACTATGACATCAA+GGG | 0.641587 | 4.3:+29852122 | MS.gene031651:CDS |
| ACGTGCATTCAACATTTGAG+GGG | 0.643157 | 4.3:+29853995 | MS.gene031651:CDS |
| CGTGGCGGAGGTGATTGGTG+AGG | 0.646371 | 4.3:-29850985 | None:intergenic |
| TTTGATTCGGAGAGTTCGGG+AGG | 0.650263 | 4.3:-29851061 | None:intergenic |
| CGTGCATTCAACATTTGAGG+GGG | 0.650995 | 4.3:+29853996 | MS.gene031651:CDS |
| TCAGCTCAGAAGTATTGGAT+CGG | 0.652959 | 4.3:+29852358 | MS.gene031651:CDS |
| GACATGCTATGTATTCTGCA+AGG | 0.654350 | 4.3:-29855132 | None:intergenic |
| CCAGAGTTATCAGCTTGCTG+AGG | 0.658447 | 4.3:+29855534 | MS.gene031651:intron |
| GGAGATGTAAACAGAACTGA+CGG | 0.662441 | 4.3:-29853052 | None:intergenic |
| ACATAAACGGAAGCAATCAG+GGG | 0.662941 | 4.3:+29852556 | MS.gene031651:CDS |
| AATATCCGAATAGCTGAATG+TGG | 0.664029 | 4.3:+29852630 | MS.gene031651:CDS |
| TTAACCAAGGCAAGTGCATG+CGG | 0.664341 | 4.3:-29855912 | None:intergenic |
| TAAGATATGCATTGACAAGG+CGG | 0.666215 | 4.3:+29853217 | MS.gene031651:CDS |
| ATCAGTCCATGGAACAACAG+AGG | 0.666691 | 4.3:+29851233 | MS.gene031651:CDS |
| CTTGGATTAGAACATATGAA+CGG | 0.667047 | 4.3:+29855181 | MS.gene031651:CDS |
| AAACGCATCAGGAATACCAA+AGG | 0.669563 | 4.3:-29855937 | None:intergenic |
| GAATGCCGTGAAGCATGTGG+AGG | 0.676248 | 4.3:+29853922 | MS.gene031651:CDS |
| GGCAATAGTTACACGACCAG+AGG | 0.678714 | 4.3:-29853031 | None:intergenic |
| GTTGTGGAGGATTGTTGGTG+CGG | 0.678862 | 4.3:-29851017 | None:intergenic |
| TTCACCACTTGGTGAAACGT+CGG | 0.679084 | 4.3:-29852839 | None:intergenic |
| AGAGCGGACTATTCAACCGG+CGG | 0.689517 | 4.3:+29851173 | MS.gene031651:CDS |
| AATACCAAAGGAGTTAACCA+AGG | 0.712604 | 4.3:-29855925 | None:intergenic |
| TACACGACCAGAGGTCAAAG+GGG | 0.719846 | 4.3:-29853022 | None:intergenic |
| CATAAACGGAAGCAATCAGG+GGG | 0.721408 | 4.3:+29852557 | MS.gene031651:CDS |
| TTCGGGTTGATGATACAGAG+CGG | 0.759200 | 4.3:+29851157 | MS.gene031651:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAATTCATTTATTATC+AGG | - | chr4.3:29852730-29852749 | None:intergenic | 10.0% |
| !! | AATTAAAAAAGATATAAAAC+AGG | - | chr4.3:29854717-29854736 | None:intergenic | 10.0% |
| !!! | AAATTAAACTTTAATTTACA+AGG | + | chr4.3:29851684-29851703 | MS.gene031651:intron | 10.0% |
| !! | AAAAAAGTTTATTTGACAAA+TGG | + | chr4.3:29852003-29852022 | MS.gene031651:intron | 15.0% |
| !! | AAAATAGAGAAATAATCATA+TGG | + | chr4.3:29854352-29854371 | MS.gene031651:intron | 15.0% |
| !! | AAATAGAGAAATAATCATAT+GGG | + | chr4.3:29854353-29854372 | MS.gene031651:intron | 15.0% |
| !! | ATATAACAAGAAAAAAATGA+TGG | + | chr4.3:29851937-29851956 | MS.gene031651:intron | 15.0% |
| !! | ATCATCATAACATAAAAATA+AGG | - | chr4.3:29851445-29851464 | None:intergenic | 15.0% |
| !! | CAAACTTAAAAATCATTTAA+AGG | - | chr4.3:29851744-29851763 | None:intergenic | 15.0% |
| !! | TAGAAATATTATTAAAGTGA+CGG | - | chr4.3:29852251-29852270 | None:intergenic | 15.0% |
| !! | TTTAATTATACCTTTAATCA+TGG | + | chr4.3:29854730-29854749 | MS.gene031651:intron | 15.0% |
| !!! | ATTTTTTAATTTATGTTCAG+AGG | + | chr4.3:29853458-29853477 | MS.gene031651:intron | 15.0% |
| !!! | TTGTTCATTTTTTTATATCT+AGG | + | chr4.3:29851905-29851924 | MS.gene031651:intron | 15.0% |
| !! | AAATCATAATAAACTACATG+TGG | - | chr4.3:29852223-29852242 | None:intergenic | 20.0% |
| !! | AAGAAACATTTCATTTAACA+AGG | - | chr4.3:29851779-29851798 | None:intergenic | 20.0% |
| !! | AATAAACAATAAGAGTGATA+TGG | - | chr4.3:29854550-29854569 | None:intergenic | 20.0% |
| !! | AATGTATATATTACCAGATA+CGG | - | chr4.3:29852689-29852708 | None:intergenic | 20.0% |
| !! | ACAAAAAACAAACCATTTAA+AGG | + | chr4.3:29855157-29855176 | MS.gene031651:CDS | 20.0% |
| !! | AGAAATATTATTAAAGTGAC+GGG | - | chr4.3:29852250-29852269 | None:intergenic | 20.0% |
| !! | AGATTTAGAGATTAATGAAT+TGG | + | chr4.3:29851552-29851571 | MS.gene031651:intron | 20.0% |
| !! | ATCATCAGAAGATATAATAA+TGG | + | chr4.3:29853639-29853658 | MS.gene031651:intron | 20.0% |
| !! | ATGAAATCACATCAAATTAT+AGG | - | chr4.3:29851821-29851840 | None:intergenic | 20.0% |
| !! | GATATAAAATGCATGTATTA+GGG | - | chr4.3:29853339-29853358 | None:intergenic | 20.0% |
| !! | GTAAATCATATTATTGCTTA+TGG | + | chr4.3:29855640-29855659 | MS.gene031651:intron | 20.0% |
| !! | TAATGTAAGATGTTAAAGTT+TGG | - | chr4.3:29853152-29853171 | None:intergenic | 20.0% |
| !! | TACAAAATATTGTGAAATAG+CGG | + | chr4.3:29854976-29854995 | MS.gene031651:intron | 20.0% |
| !! | TATATGTAGTTAGATTGTTT+GGG | + | chr4.3:29852431-29852450 | MS.gene031651:intron | 20.0% |
| !! | TGGTTTCTTTATATGATTAA+TGG | + | chr4.3:29852034-29852053 | MS.gene031651:intron | 20.0% |
| !!! | AATTGCATTTTACATTTTAC+TGG | + | chr4.3:29854324-29854343 | MS.gene031651:intron | 20.0% |
| !!! | AGCTTCTTTTATATTTTCTT+AGG | - | chr4.3:29851524-29851543 | None:intergenic | 20.0% |
| !!! | GTCTTTCTCTTTTATATTAT+CGG | - | chr4.3:29851502-29851521 | None:intergenic | 20.0% |
| !!! | TAAACTTTAATTTACAAGGT+AGG | + | chr4.3:29851688-29851707 | MS.gene031651:intron | 20.0% |
| !!! | TAAAGTTTAATTTAAGCATG+TGG | - | chr4.3:29851677-29851696 | None:intergenic | 20.0% |
| !!! | TATATGATTAATGGATTTCA+GGG | + | chr4.3:29852043-29852062 | MS.gene031651:intron | 20.0% |
| !!! | TTATATGATTAATGGATTTC+AGG | + | chr4.3:29852042-29852061 | MS.gene031651:intron | 20.0% |
| !!! | TTCATTTTTTTATATCTAGG+TGG | + | chr4.3:29851908-29851927 | MS.gene031651:intron | 20.0% |
| !!! | TTGTCAAATAAACTTTTTTG+AGG | - | chr4.3:29852002-29852021 | None:intergenic | 20.0% |
| !!! | TTTTAAGTTTGACACATAAT+TGG | + | chr4.3:29851753-29851772 | MS.gene031651:intron | 20.0% |
| !!! | TTTTGTTTGTTGTTAAATAG+TGG | + | chr4.3:29854888-29854907 | MS.gene031651:intron | 20.0% |
| ! | AACCTCATAATAACATTATG+AGG | - | chr4.3:29853438-29853457 | None:intergenic | 25.0% |
| ! | AAGTCAAATAGTAATAGACT+GGG | - | chr4.3:29854691-29854710 | None:intergenic | 25.0% |
| ! | AATACTGAAAACATTTATGG+AGG | + | chr4.3:29855585-29855604 | MS.gene031651:CDS | 25.0% |
| ! | AATGATTCCATCTTTATATG+TGG | + | chr4.3:29853080-29853099 | MS.gene031651:intron | 25.0% |
| ! | AATTGTTCAATACTACTTCA+TGG | - | chr4.3:29854838-29854857 | None:intergenic | 25.0% |
| ! | ACCTCATAATAACATTATGA+GGG | - | chr4.3:29853437-29853456 | None:intergenic | 25.0% |
| ! | AGCAATACTGAAAACATTTA+TGG | + | chr4.3:29855582-29855601 | MS.gene031651:CDS | 25.0% |
| ! | ATCTAACAACAGAAAATGAA+AGG | - | chr4.3:29853180-29853199 | None:intergenic | 25.0% |
| ! | ATGTAAGCAAACTTTGTAAT+TGG | - | chr4.3:29852954-29852973 | None:intergenic | 25.0% |
| ! | ATTGTTCAATACTACTTCAT+GGG | - | chr4.3:29854837-29854856 | None:intergenic | 25.0% |
| ! | CAAACAATCTAACTACATAT+AGG | - | chr4.3:29852432-29852451 | None:intergenic | 25.0% |
| ! | CTATATGTAGTTAGATTGTT+TGG | + | chr4.3:29852430-29852449 | MS.gene031651:intron | 25.0% |
| ! | GAATTTAACAAATTCTCTCT+GGG | - | chr4.3:29852814-29852833 | None:intergenic | 25.0% |
| ! | GGATATAAAATGCATGTATT+AGG | - | chr4.3:29853340-29853359 | None:intergenic | 25.0% |
| ! | GGTAAATAAATTATCTAAGG+TGG | - | chr4.3:29851977-29851996 | None:intergenic | 25.0% |
| ! | TAACAACAAACAAAAATGAG+TGG | - | chr4.3:29854883-29854902 | None:intergenic | 25.0% |
| ! | TAATGAATTGGACTGAAATA+TGG | + | chr4.3:29851564-29851583 | MS.gene031651:intron | 25.0% |
| ! | TGCAATAAAAAATACAGATC+AGG | + | chr4.3:29852870-29852889 | MS.gene031651:CDS | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | chr4.3:29851584-29851603 | MS.gene031651:intron | 25.0% |
| ! | TTCATATCCACATATAAAGA+TGG | - | chr4.3:29853090-29853109 | None:intergenic | 25.0% |
| ! | TTCTAATCACTTGAACAAAA+AGG | - | chr4.3:29854520-29854539 | None:intergenic | 25.0% |
| !! | ACTACATATAGGCTTTTAAA+TGG | - | chr4.3:29852421-29852440 | None:intergenic | 25.0% |
| !! | ACTTAACAGTGTTAACTTTT+TGG | + | chr4.3:29854465-29854484 | MS.gene031651:intron | 25.0% |
| !! | TGTGATAGATTGTAATTTGT+AGG | + | chr4.3:29853860-29853879 | MS.gene031651:intron | 25.0% |
| !!! | AAAACCAGTTTTGAATTGAA+AGG | - | chr4.3:29854225-29854244 | None:intergenic | 25.0% |
| !!! | AAACCAGTTTTGAATTGAAA+GGG | - | chr4.3:29854224-29854243 | None:intergenic | 25.0% |
| !!! | ATATGATTAATGGATTTCAG+GGG | + | chr4.3:29852044-29852063 | MS.gene031651:intron | 25.0% |
| !!! | TAGACTTGTTTTACTTTATC+TGG | - | chr4.3:29855716-29855735 | None:intergenic | 25.0% |
| !!! | TATGGATGGATTGAATTTAT+GGG | + | chr4.3:29855077-29855096 | MS.gene031651:intron | 25.0% |
| !!! | TCAAATAAACTTTTTTGAGG+CGG | - | chr4.3:29851999-29852018 | None:intergenic | 25.0% |
| AAATGAGTAAACTCAAGTTC+TGG | + | chr4.3:29852751-29852770 | MS.gene031651:intron | 30.0% | |
| AACAAACCATTTAAAGGTCT+TGG | + | chr4.3:29855163-29855182 | MS.gene031651:CDS | 30.0% | |
| AAGTTAACACTGTTAAGTGA+AGG | - | chr4.3:29854463-29854482 | None:intergenic | 30.0% | |
| AATAGCGAATCACATAACAA+TGG | - | chr4.3:29854954-29854973 | None:intergenic | 30.0% | |
| ACTACTTATGATCCAAATTC+TGG | + | chr4.3:29852307-29852326 | MS.gene031651:CDS | 30.0% | |
| ACTGAAAACTATGACATCAA+GGG | + | chr4.3:29852122-29852141 | MS.gene031651:CDS | 30.0% | |
| AGATTTCAGCTAAAACATAC+TGG | + | chr4.3:29854575-29854594 | MS.gene031651:intron | 30.0% | |
| AGGTCATTACAAATATCAAC+AGG | - | chr4.3:29855288-29855307 | None:intergenic | 30.0% | |
| AGTGAAGAATCATTCTTTGT+AGG | + | chr4.3:29854144-29854163 | MS.gene031651:intron | 30.0% | |
| ATGATTTACCTTCAATGAAC+CGG | - | chr4.3:29855629-29855648 | None:intergenic | 30.0% | |
| ATTCAGCTATTCGGATATTT+GGG | - | chr4.3:29852629-29852648 | None:intergenic | 30.0% | |
| ATTTAAAGGCTTGAGCTTTA+GGG | - | chr4.3:29851730-29851749 | None:intergenic | 30.0% | |
| CAAGTCAAATAGTAATAGAC+TGG | - | chr4.3:29854692-29854711 | None:intergenic | 30.0% | |
| CAATGCATATCTTATAGCAA+TGG | - | chr4.3:29853211-29853230 | None:intergenic | 30.0% | |
| CAATGTGATTCAAATCCTTT+AGG | + | chr4.3:29853376-29853395 | MS.gene031651:intron | 30.0% | |
| CTATAGCAAAACGTTTCAAT+AGG | - | chr4.3:29855385-29855404 | None:intergenic | 30.0% | |
| GAATGTTGTTGGATTTGATT+CGG | - | chr4.3:29851077-29851096 | None:intergenic | 30.0% | |
| GCGGGTAAATAAATTATCTA+AGG | - | chr4.3:29851980-29851999 | None:intergenic | 30.0% | |
| GGAATTTAACAAATTCTCTC+TGG | - | chr4.3:29852815-29852834 | None:intergenic | 30.0% | |
| GGATTGCTATCATTATACTT+GGG | + | chr4.3:29853837-29853856 | MS.gene031651:intron | 30.0% | |
| GTAAGGAGATTAACATAAAC+AGG | - | chr4.3:29853666-29853685 | None:intergenic | 30.0% | |
| TAAAGATGGAATCATTACCT+TGG | - | chr4.3:29853076-29853095 | None:intergenic | 30.0% | |
| TACTGAAAACTATGACATCA+AGG | + | chr4.3:29852121-29852140 | MS.gene031651:CDS | 30.0% | |
| TATCTTCTGATGATCAAACT+AGG | - | chr4.3:29853633-29853652 | None:intergenic | 30.0% | |
| TCACATCAAATTATAGGTCT+AGG | - | chr4.3:29851815-29851834 | None:intergenic | 30.0% | |
| TCCCTCATAATGTTATTATG+AGG | + | chr4.3:29853433-29853452 | MS.gene031651:intron | 30.0% | |
| TCTAATCCAAGACCTTTAAA+TGG | - | chr4.3:29855172-29855191 | None:intergenic | 30.0% | |
| TGGATTGCTATCATTATACT+TGG | + | chr4.3:29853836-29853855 | MS.gene031651:intron | 30.0% | |
| TGTTGATATTTGTAATGACC+TGG | + | chr4.3:29855287-29855306 | MS.gene031651:intron | 30.0% | |
| TTATATCAAATGCTTTCGTC+TGG | - | chr4.3:29853510-29853529 | None:intergenic | 30.0% | |
| TTGTTCAATACTACTTCATG+GGG | - | chr4.3:29854836-29854855 | None:intergenic | 30.0% | |
| TTTCATATTCAAACAGTGCA+CGG | - | chr4.3:29854198-29854217 | None:intergenic | 30.0% | |
| ! | AAACCGTATTGGTCAATTTA+AGG | + | chr4.3:29853963-29853982 | MS.gene031651:CDS | 30.0% |
| ! | AACCGTATTGGTCAATTTAA+GGG | + | chr4.3:29853964-29853983 | MS.gene031651:CDS | 30.0% |
| ! | ACTTTAATTTACAAGGTAGG+TGG | + | chr4.3:29851691-29851710 | MS.gene031651:intron | 30.0% |
| ! | CCTTTTCTATTACACCAAAT+GGG | + | chr4.3:29853241-29853260 | MS.gene031651:CDS | 30.0% |
| ! | CTATAAGATATGCATTGACA+AGG | + | chr4.3:29853214-29853233 | MS.gene031651:CDS | 30.0% |
| ! | CTTGGATTAGAACATATGAA+CGG | + | chr4.3:29855181-29855200 | MS.gene031651:CDS | 30.0% |
| ! | GGTCACAAAATTGGTTTAAA+TGG | + | chr4.3:29852651-29852670 | MS.gene031651:CDS | 30.0% |
| ! | GTGTTAACTTTTTGGATGAT+TGG | + | chr4.3:29854473-29854492 | MS.gene031651:intron | 30.0% |
| ! | TGCATTTTACATTTTACTGG+TGG | + | chr4.3:29854327-29854346 | MS.gene031651:intron | 30.0% |
| ! | TTGGAGATAAAACCTACTTT+TGG | + | chr4.3:29854437-29854456 | MS.gene031651:intron | 30.0% |
| ! | TTTTCACAGCTCAACATAAA+CGG | + | chr4.3:29852543-29852562 | MS.gene031651:CDS | 30.0% |
| ! | TTTTTATATCTAGGTGGTTG+TGG | + | chr4.3:29851914-29851933 | MS.gene031651:intron | 30.0% |
| !! | AGAGAATTTGTTAAATTCCG+TGG | + | chr4.3:29852816-29852835 | MS.gene031651:CDS | 30.0% |
| !! | ATTGAAACGTTTTGCTATAG+AGG | + | chr4.3:29855385-29855404 | MS.gene031651:CDS | 30.0% |
| !! | CTATGGATGGATTGAATTTA+TGG | + | chr4.3:29855076-29855095 | MS.gene031651:intron | 30.0% |
| !! | GGTTTAAATGGAGTTGATAA+TGG | + | chr4.3:29852663-29852682 | MS.gene031651:CDS | 30.0% |
| !! | TAGAACTTGTTAACTGAGAT+GGG | - | chr4.3:29855222-29855241 | None:intergenic | 30.0% |
| !! | TATTGTTTCTAGTGCATACA+AGG | + | chr4.3:29853775-29853794 | MS.gene031651:CDS | 30.0% |
| !!! | AACCAGTTTTGAATTGAAAG+GGG | - | chr4.3:29854223-29854242 | None:intergenic | 30.0% |
| !!! | ATTTCTAGAGTGATTTTCAC+AGG | + | chr4.3:29852264-29852283 | MS.gene031651:intron | 30.0% |
| !!! | CAAATAAACTTTTTTGAGGC+GGG | - | chr4.3:29851998-29852017 | None:intergenic | 30.0% |
| !!! | TTTTATATCCATTTGCTGTG+AGG | + | chr4.3:29853350-29853369 | MS.gene031651:intron | 30.0% |
| AAAATAAGGTAGAGAGAGAG+AGG | - | chr4.3:29851431-29851450 | None:intergenic | 35.0% | |
| AAATAAGGTAGAGAGAGAGA+GGG | - | chr4.3:29851430-29851449 | None:intergenic | 35.0% | |
| AAATGCTTTCGTCTGGAAAT+TGG | - | chr4.3:29853503-29853522 | None:intergenic | 35.0% | |
| AAATGGGAAATTGTCATCTC+TGG | - | chr4.3:29854760-29854779 | None:intergenic | 35.0% | |
| AACAATGTATGAAGTGTAGC+AGG | + | chr4.3:29854076-29854095 | MS.gene031651:intron | 35.0% | |
| AACATAAACGGAAGCAATCA+GGG | + | chr4.3:29852555-29852574 | MS.gene031651:CDS | 35.0% | |
| AAGGAATTTCACATGAGAGA+TGG | + | chr4.3:29854629-29854648 | MS.gene031651:intron | 35.0% | |
| AAGTCCACGGATATCATAAA+TGG | - | chr4.3:29854777-29854796 | None:intergenic | 35.0% | |
| AATACCAAAGGAGTTAACCA+AGG | - | chr4.3:29855928-29855947 | None:intergenic | 35.0% | |
| AATATCCGAATAGCTGAATG+TGG | + | chr4.3:29852630-29852649 | MS.gene031651:CDS | 35.0% | |
| ACTTACATCTTCGCAAGTAA+AGG | - | chr4.3:29853315-29853334 | None:intergenic | 35.0% | |
| AGTCCACGGATATCATAAAT+GGG | - | chr4.3:29854776-29854795 | None:intergenic | 35.0% | |
| ATCCATAGTGTTGTCAATTG+CGG | - | chr4.3:29855064-29855083 | None:intergenic | 35.0% | |
| ATGACAAACTCACCAGAATT+TGG | - | chr4.3:29852322-29852341 | None:intergenic | 35.0% | |
| ATTCAACTCTTGAGAGTAAC+TGG | + | chr4.3:29854376-29854395 | MS.gene031651:intron | 35.0% | |
| CAAATACGCAATTCGTTTCA+TGG | - | chr4.3:29851266-29851285 | None:intergenic | 35.0% | |
| CAAGTATCCATATCGAAGAA+AGG | - | chr4.3:29855832-29855851 | None:intergenic | 35.0% | |
| CACCCTTAAATTGACCAATA+CGG | - | chr4.3:29853969-29853988 | None:intergenic | 35.0% | |
| CATTCAGCTATTCGGATATT+TGG | - | chr4.3:29852630-29852649 | None:intergenic | 35.0% | |
| CATTTAAAGGCTTGAGCTTT+AGG | - | chr4.3:29851731-29851750 | None:intergenic | 35.0% | |
| CATTTCACTTCAGATAAGCA+AGG | + | chr4.3:29855105-29855124 | MS.gene031651:intron | 35.0% | |
| CTCAATAGGATGTGATTGTT+AGG | + | chr4.3:29852196-29852215 | MS.gene031651:intron | 35.0% | |
| CTCTCATGTGAAATTCCTTT+CGG | - | chr4.3:29854628-29854647 | None:intergenic | 35.0% | |
| GAAACGAATTGCGTATTTGT+TGG | + | chr4.3:29851267-29851286 | MS.gene031651:CDS | 35.0% | |
| GAAGAATCATTCTTTGTAGG+AGG | + | chr4.3:29854147-29854166 | MS.gene031651:intron | 35.0% | |
| GAATAATATGCGTACTCTTC+AGG | + | chr4.3:29853811-29853830 | MS.gene031651:CDS | 35.0% | |
| GATATTTGTAATGACCTGGT+TGG | + | chr4.3:29855291-29855310 | MS.gene031651:intron | 35.0% | |
| GATCAATCTGTGTAAATGAG+AGG | - | chr4.3:29855340-29855359 | None:intergenic | 35.0% | |
| GTCAAAACTGAAAACCGTAT+TGG | + | chr4.3:29853952-29853971 | MS.gene031651:CDS | 35.0% | |
| GTTATATGCCTTGATTAGTG+TGG | + | chr4.3:29855794-29855813 | MS.gene031651:CDS | 35.0% | |
| GTTGTACTAATGCATGAATC+AGG | + | chr4.3:29853900-29853919 | MS.gene031651:intron | 35.0% | |
| GTTTCAGAACATCAATCTCA+AGG | + | chr4.3:29855407-29855426 | MS.gene031651:CDS | 35.0% | |
| TAATCAAGCAGTAAAACCTC+AGG | - | chr4.3:29853267-29853286 | None:intergenic | 35.0% | |
| TAGTGACAGTTTCAATTCCT+CGG | - | chr4.3:29852291-29852310 | None:intergenic | 35.0% | |
| TCAATCTCAAGGAAATAGCA+AGG | + | chr4.3:29855418-29855437 | MS.gene031651:CDS | 35.0% | |
| TCCTGATTATAATCAGTCCA+TGG | + | chr4.3:29851222-29851241 | MS.gene031651:CDS | 35.0% | |
| TCTCATGTGAAATTCCTTTC+GGG | - | chr4.3:29854627-29854646 | None:intergenic | 35.0% | |
| TGAGGGACATATACTAAAAG+TGG | - | chr4.3:29853420-29853439 | None:intergenic | 35.0% | |
| TTCAACTCTTGAGAGTAACT+GGG | + | chr4.3:29854377-29854396 | MS.gene031651:intron | 35.0% | |
| TTCAGCTAAAACATACTGGT+AGG | + | chr4.3:29854579-29854598 | MS.gene031651:intron | 35.0% | |
| TTCCCCTTTCAATTCAAAAC+TGG | + | chr4.3:29854218-29854237 | MS.gene031651:intron | 35.0% | |
| TTTCCCATTTATGATATCCG+TGG | + | chr4.3:29854770-29854789 | MS.gene031651:intron | 35.0% | |
| ! | AAAGTGGCATACCTAAGTTT+TGG | - | chr4.3:29853404-29853423 | None:intergenic | 35.0% |
| ! | ATGCTTTTATTGCCCAAATC+AGG | + | chr4.3:29852583-29852602 | MS.gene031651:CDS | 35.0% |
| ! | GATTGTAATTTGTAGGCTAC+TGG | + | chr4.3:29853867-29853886 | MS.gene031651:intron | 35.0% |
| ! | GCCTTTTCTATTACACCAAA+TGG | + | chr4.3:29853240-29853259 | MS.gene031651:CDS | 35.0% |
| ! | TAAAAACAGATCTAGAGCCT+AGG | - | chr4.3:29854173-29854192 | None:intergenic | 35.0% |
| ! | TAAGATATGCATTGACAAGG+CGG | + | chr4.3:29853217-29853236 | MS.gene031651:CDS | 35.0% |
| ! | TCCATGGACTGATTATAATC+AGG | - | chr4.3:29851226-29851245 | None:intergenic | 35.0% |
| ! | TCCTTTAGGAACCAAAACTT+AGG | + | chr4.3:29853390-29853409 | MS.gene031651:intron | 35.0% |
| ! | TGCTTTTATTGCCCAAATCA+GGG | + | chr4.3:29852584-29852603 | MS.gene031651:CDS | 35.0% |
| ! | TTGGTGTTCATATCTTCTTG+TGG | + | chr4.3:29851401-29851420 | MS.gene031651:CDS | 35.0% |
| !! | AATAGACGTTGTTGATGACT+TGG | - | chr4.3:29853291-29853310 | None:intergenic | 35.0% |
| !! | ATAGACGTTGTTGATGACTT+GGG | - | chr4.3:29853290-29853309 | None:intergenic | 35.0% |
| !! | ATTATCGGTGTCAATGTGTA+GGG | - | chr4.3:29851487-29851506 | None:intergenic | 35.0% |
| !! | CCCATTTGGTGTAATAGAAA+AGG | - | chr4.3:29853244-29853263 | None:intergenic | 35.0% |
| !! | GTAGAACTTGTTAACTGAGA+TGG | - | chr4.3:29855223-29855242 | None:intergenic | 35.0% |
| !! | TATTATCGGTGTCAATGTGT+AGG | - | chr4.3:29851488-29851507 | None:intergenic | 35.0% |
| !! | TGAATTGCTTTGTTTGACTC+AGG | - | chr4.3:29853755-29853774 | None:intergenic | 35.0% |
| !! | TGTTTTGCTATGTCTGAGTT+GGG | + | chr4.3:29852146-29852165 | MS.gene031651:CDS | 35.0% |
| !! | TTGTTTTGCTATGTCTGAGT+TGG | + | chr4.3:29852145-29852164 | MS.gene031651:CDS | 35.0% |
| !!! | ACCTAAGTTTTGGTTCCTAA+AGG | - | chr4.3:29853394-29853413 | None:intergenic | 35.0% |
| !!! | CATACAAGGCTACTTTTACA+TGG | + | chr4.3:29853789-29853808 | MS.gene031651:CDS | 35.0% |
| !!! | TGATTGCTTTTTCTGAGAGT+TGG | + | chr4.3:29852893-29852912 | MS.gene031651:intron | 35.0% |
| AAACGCATCAGGAATACCAA+AGG | - | chr4.3:29855940-29855959 | None:intergenic | 40.0% | |
| AACAACATATATGAGCCGCA+GGG | - | chr4.3:29853566-29853585 | None:intergenic | 40.0% | |
| AACTTCCTCAACTCTTCTTG+TGG | - | chr4.3:29851331-29851350 | None:intergenic | 40.0% | |
| AAGTCAATCGACAAAGTCCA+CGG | - | chr4.3:29854790-29854809 | None:intergenic | 40.0% | |
| AATAAGGTAGAGAGAGAGAG+GGG | - | chr4.3:29851429-29851448 | None:intergenic | 40.0% | |
| ACAAGAAGAGTTGAGGAAGT+TGG | + | chr4.3:29851330-29851349 | MS.gene031651:CDS | 40.0% | |
| ACATAAACGGAAGCAATCAG+GGG | + | chr4.3:29852556-29852575 | MS.gene031651:CDS | 40.0% | |
| ACGTGCATTCAACATTTGAG+GGG | + | chr4.3:29853995-29854014 | MS.gene031651:CDS | 40.0% | |
| ACTTCCTCAACTCTTCTTGT+GGG | - | chr4.3:29851330-29851349 | None:intergenic | 40.0% | |
| AGACACATCATATGTCTCCT+AGG | - | chr4.3:29854262-29854281 | None:intergenic | 40.0% | |
| AGTAGGAGTTATGTGTGAAG+TGG | + | chr4.3:29854108-29854127 | MS.gene031651:intron | 40.0% | |
| ATATGCGTACTCTTCAGGTA+TGG | + | chr4.3:29853816-29853835 | MS.gene031651:intron | 40.0% | |
| ATCCGCAATTGACAACACTA+TGG | + | chr4.3:29855059-29855078 | MS.gene031651:intron | 40.0% | |
| ATGTCTCCTAGGCTTGAATT+TGG | - | chr4.3:29854251-29854270 | None:intergenic | 40.0% | |
| ATTTAAGCATGTGGCAGCTT+TGG | - | chr4.3:29851668-29851687 | None:intergenic | 40.0% | |
| CAACATAAACGGAAGCAATC+AGG | + | chr4.3:29852554-29852573 | MS.gene031651:CDS | 40.0% | |
| CAACCCAGTTGTATGCAATA+GGG | - | chr4.3:29855968-29855987 | None:intergenic | 40.0% | |
| CAGAAAATGCTTCTGTAGTG+AGG | + | chr4.3:29855856-29855875 | MS.gene031651:CDS | 40.0% | |
| CAGTTCTGTTTACATCTCCA+AGG | + | chr4.3:29853056-29853075 | MS.gene031651:CDS | 40.0% | |
| CATCAAGAGCAGTGAATTTC+AGG | + | chr4.3:29855243-29855262 | MS.gene031651:CDS | 40.0% | |
| CATGGGAGTAATGTATGTGA+AGG | + | chr4.3:29852170-29852189 | MS.gene031651:intron | 40.0% | |
| CATTGAATCCTCACAGCAAA+TGG | - | chr4.3:29853361-29853380 | None:intergenic | 40.0% | |
| CTGAAATTCACTGCTCTTGA+TGG | - | chr4.3:29855245-29855264 | None:intergenic | 40.0% | |
| CTTCACATACATTACTCCCA+TGG | - | chr4.3:29852172-29852191 | None:intergenic | 40.0% | |
| GACATGCTATGTATTCTGCA+AGG | - | chr4.3:29855135-29855154 | None:intergenic | 40.0% | |
| GACGTGCATTCAACATTTGA+GGG | + | chr4.3:29853994-29854013 | MS.gene031651:CDS | 40.0% | |
| GACTAAGCATGACAAAGCAT+AGG | - | chr4.3:29854605-29854624 | None:intergenic | 40.0% | |
| GCAATTGACAACACTATGGA+TGG | + | chr4.3:29855063-29855082 | MS.gene031651:intron | 40.0% | |
| GCATATCTGTAGAAGACGTA+AGG | - | chr4.3:29853683-29853702 | None:intergenic | 40.0% | |
| GCATTAGTACAACCTTAGTG+AGG | - | chr4.3:29853893-29853912 | None:intergenic | 40.0% | |
| GCTGAATGTGGTCACAAAAT+TGG | + | chr4.3:29852642-29852661 | MS.gene031651:CDS | 40.0% | |
| GGAGATGTAAACAGAACTGA+CGG | - | chr4.3:29853055-29853074 | None:intergenic | 40.0% | |
| GTTAAGTGAAGGCCAAAAGT+AGG | - | chr4.3:29854452-29854471 | None:intergenic | 40.0% | |
| TAACAACATATATGAGCCGC+AGG | - | chr4.3:29853567-29853586 | None:intergenic | 40.0% | |
| TAGAGTCCTCACTAGAATGA+AGG | - | chr4.3:29855450-29855469 | None:intergenic | 40.0% | |
| TCAACCCAGTTGTATGCAAT+AGG | - | chr4.3:29855969-29855988 | None:intergenic | 40.0% | |
| TCAACTCTTGAGAGTAACTG+GGG | + | chr4.3:29854378-29854397 | MS.gene031651:intron | 40.0% | |
| TCCATCTGAATCCCTGATTT+GGG | - | chr4.3:29852598-29852617 | None:intergenic | 40.0% | |
| TGACGTGCATTCAACATTTG+AGG | + | chr4.3:29853993-29854012 | MS.gene031651:CDS | 40.0% | |
| TGCGGCTCATATATGTTGTT+AGG | + | chr4.3:29853566-29853585 | MS.gene031651:intron | 40.0% | |
| TGTGACCACATTCAGCTATT+CGG | - | chr4.3:29852638-29852657 | None:intergenic | 40.0% | |
| TTCCATCTGAATCCCTGATT+TGG | - | chr4.3:29852599-29852618 | None:intergenic | 40.0% | |
| TTGCGGATCGCATAAAATAG+CGG | - | chr4.3:29855047-29855066 | None:intergenic | 40.0% | |
| TTTCTGCCAAATTCAAGCCT+AGG | + | chr4.3:29854242-29854261 | MS.gene031651:intron | 40.0% | |
| ! | AAGATATGCATTGACAAGGC+GGG | + | chr4.3:29853218-29853237 | MS.gene031651:CDS | 40.0% |
| ! | ACTGGGTTGAGTCAAATTCT+TGG | + | chr4.3:29855979-29855998 | MS.gene031651:CDS | 40.0% |
| ! | ATTGCGTATTTGTTGGATCG+TGG | + | chr4.3:29851274-29851293 | MS.gene031651:CDS | 40.0% |
| ! | CTCTGGAGAACCATGATTAA+AGG | - | chr4.3:29854743-29854762 | None:intergenic | 40.0% |
| ! | GCTACTTCGTTTGAGTTTGT+TGG | + | chr4.3:29854418-29854437 | MS.gene031651:intron | 40.0% |
| ! | TTGGCTCTTCATGAGGTTAT+TGG | + | chr4.3:29851349-29851368 | MS.gene031651:CDS | 40.0% |
| !! | ATTAATGGATTTCAGGGGTG+GGG | + | chr4.3:29852049-29852068 | MS.gene031651:intron | 40.0% |
| !! | CATTCTCTTGCTGTTAAGCT+TGG | + | chr4.3:29851382-29851401 | MS.gene031651:CDS | 40.0% |
| !! | GATTAATGGATTTCAGGGGT+GGG | + | chr4.3:29852048-29852067 | MS.gene031651:intron | 40.0% |
| !! | TCAAAGGTGTCGAATGTTGT+TGG | - | chr4.3:29851088-29851107 | None:intergenic | 40.0% |
| !! | TCAGCTCAGAAGTATTGGAT+CGG | + | chr4.3:29852358-29852377 | MS.gene031651:CDS | 40.0% |
| !! | TGATTAATGGATTTCAGGGG+TGG | + | chr4.3:29852047-29852066 | MS.gene031651:intron | 40.0% |
| !! | TGGATTTGATTCGGAGAGTT+CGG | - | chr4.3:29851068-29851087 | None:intergenic | 40.0% |
| AACAACCAAGCCACTAAGTG+GGG | - | chr4.3:29851632-29851651 | None:intergenic | 45.0% | |
| ACAACAACCAAGCCACTAAG+TGG | - | chr4.3:29851634-29851653 | None:intergenic | 45.0% | |
| AGTAAAACCTCAGGCCCATT+TGG | - | chr4.3:29853258-29853277 | None:intergenic | 45.0% | |
| AGTCTGCCTTCATTCTAGTG+AGG | + | chr4.3:29855441-29855460 | MS.gene031651:intron | 45.0% | |
| ATAGGGCTCAAAAACGCATC+AGG | - | chr4.3:29855951-29855970 | None:intergenic | 45.0% | |
| ATCAGTCCATGGAACAACAG+AGG | + | chr4.3:29851233-29851252 | MS.gene031651:CDS | 45.0% | |
| CAAAATAAACACCTGCCCTG+CGG | + | chr4.3:29853548-29853567 | MS.gene031651:intron | 45.0% | |
| CAACAACCAAGCCACTAAGT+GGG | - | chr4.3:29851633-29851652 | None:intergenic | 45.0% | |
| CAACAATGTTCTGATGCAGC+AGG | + | chr4.3:29854020-29854039 | MS.gene031651:CDS | 45.0% | |
| CAAGAGCTTTCGCATCTCAA+AGG | - | chr4.3:29851104-29851123 | None:intergenic | 45.0% | |
| CATAAACGGAAGCAATCAGG+GGG | + | chr4.3:29852557-29852576 | MS.gene031651:CDS | 45.0% | |
| CGAAGTTCAGCACATAGCTT+TGG | - | chr4.3:29855891-29855910 | None:intergenic | 45.0% | |
| CGTGCATTCAACATTTGAGG+GGG | + | chr4.3:29853996-29854015 | MS.gene031651:CDS | 45.0% | |
| CTAAGAATGCTGCAAACCTC+TGG | - | chr4.3:29853002-29853021 | None:intergenic | 45.0% | |
| CTTGCCTTGGTTAACTCCTT+TGG | + | chr4.3:29855921-29855940 | MS.gene031651:CDS | 45.0% | |
| GAGCCCTATTGCATACAACT+GGG | + | chr4.3:29855962-29855981 | MS.gene031651:CDS | 45.0% | |
| GATAGAAGCTTCTACCAACC+AGG | - | chr4.3:29855308-29855327 | None:intergenic | 45.0% | |
| GCACTCAAGTATTCACCACT+TGG | - | chr4.3:29852853-29852872 | None:intergenic | 45.0% | |
| GTATGTGAAGGCTGCTCAAT+AGG | + | chr4.3:29852182-29852201 | MS.gene031651:intron | 45.0% | |
| GTCTTCGTCCACACTAATCA+AGG | - | chr4.3:29855805-29855824 | None:intergenic | 45.0% | |
| GTTAACTGAGATGGGATGAC+AGG | - | chr4.3:29855214-29855233 | None:intergenic | 45.0% | |
| TATTACACCAAATGGGCCTG+AGG | + | chr4.3:29853248-29853267 | MS.gene031651:CDS | 45.0% | |
| TCAATAGGTCTCGCTCTCTT+AGG | - | chr4.3:29855370-29855389 | None:intergenic | 45.0% | |
| TCAGTCCATGGAACAACAGA+GGG | + | chr4.3:29851234-29851253 | MS.gene031651:CDS | 45.0% | |
| TCATTCTTTGTAGGAGGCCT+AGG | + | chr4.3:29854153-29854172 | MS.gene031651:intron | 45.0% | |
| TGAGCCCTATTGCATACAAC+TGG | + | chr4.3:29855961-29855980 | MS.gene031651:CDS | 45.0% | |
| TTAACCAAGGCAAGTGCATG+CGG | - | chr4.3:29855915-29855934 | None:intergenic | 45.0% | |
| TTACACGACCAGAGGTCAAA+GGG | - | chr4.3:29853026-29853045 | None:intergenic | 45.0% | |
| TTGTCATGCTTAGTCCCGAA+AGG | + | chr4.3:29854610-29854629 | MS.gene031651:intron | 45.0% | |
| TTTACCTTCAATGAACCGGC+TGG | - | chr4.3:29855625-29855644 | None:intergenic | 45.0% | |
| TTTGACAAATGGCTCACTGC+TGG | + | chr4.3:29852014-29852033 | MS.gene031651:intron | 45.0% | |
| ! | GAGTAAACTCAAGTTCTGGC+TGG | + | chr4.3:29852755-29852774 | MS.gene031651:intron | 45.0% |
| ! | GTGAGTCAGCTCAGAAGTAT+TGG | + | chr4.3:29852353-29852372 | MS.gene031651:CDS | 45.0% |
| ! | TACTTCTGAGCTGACTCACA+CGG | - | chr4.3:29852352-29852371 | None:intergenic | 45.0% |
| ! | TGGATCGTGGTGTTTTTCGT+GGG | + | chr4.3:29851287-29851306 | MS.gene031651:CDS | 45.0% |
| ! | TTCACCACTTGGTGAAACGT+CGG | - | chr4.3:29852842-29852861 | None:intergenic | 45.0% |
| ! | TTGCATTTTGTCTCCTCTGC+AGG | + | chr4.3:29855749-29855768 | MS.gene031651:intron | 45.0% |
| ! | TTGGATCGTGGTGTTTTTCG+TGG | + | chr4.3:29851286-29851305 | MS.gene031651:CDS | 45.0% |
| ! | TTTACCAGCCGGTTCATTGA+AGG | + | chr4.3:29855618-29855637 | MS.gene031651:CDS | 45.0% |
| !! | ACTTAGTGGCTTGGTTGTTG+TGG | + | chr4.3:29851633-29851652 | MS.gene031651:intron | 45.0% |
| !! | CTTTGAGATGCGAAAGCTCT+TGG | + | chr4.3:29851102-29851121 | MS.gene031651:CDS | 45.0% |
| !! | GAGTTGATAATGGCCGTATC+TGG | + | chr4.3:29852673-29852692 | MS.gene031651:CDS | 45.0% |
| !! | GGATTTGATTCGGAGAGTTC+GGG | - | chr4.3:29851067-29851086 | None:intergenic | 45.0% |
| !! | TACAGAGCGGACTATTCAAC+CGG | + | chr4.3:29851170-29851189 | MS.gene031651:CDS | 45.0% |
| !! | TATCAGCTTGCTGAGGACTT+GGG | + | chr4.3:29855541-29855560 | MS.gene031651:CDS | 45.0% |
| !! | TTATCAGCTTGCTGAGGACT+TGG | + | chr4.3:29855540-29855559 | MS.gene031651:CDS | 45.0% |
| !! | TTCGGGTTGATGATACAGAG+CGG | + | chr4.3:29851157-29851176 | MS.gene031651:CDS | 45.0% |
| ACAATCTGGAAGATCGCGAC+TGG | + | chr4.3:29851131-29851150 | MS.gene031651:CDS | 50.0% | |
| AGACCTAAGACATCCTGCAG+AGG | - | chr4.3:29855765-29855784 | None:intergenic | 50.0% | |
| AGCTAAGGCAAGCGTAGTTG+TGG | - | chr4.3:29851036-29851055 | None:intergenic | 50.0% | |
| ATAGGTCTCGCTCTCTTAGG+TGG | - | chr4.3:29855367-29855386 | None:intergenic | 50.0% | |
| ATGGCCCACAAGAAGAGTTG+AGG | + | chr4.3:29851323-29851342 | MS.gene031651:CDS | 50.0% | |
| CATCTCCCTCTGTTGTTCCA+TGG | - | chr4.3:29851242-29851261 | None:intergenic | 50.0% | |
| CCTCAGCAAGCTGATAACTC+TGG | - | chr4.3:29855537-29855556 | None:intergenic | 50.0% | |
| GACGCTGCCTTTCTTCGATA+TGG | + | chr4.3:29855822-29855841 | MS.gene031651:CDS | 50.0% | |
| GAGATGCGAAAGCTCTTGGA+CGG | + | chr4.3:29851106-29851125 | MS.gene031651:CDS | 50.0% | |
| GCCCAAATCAGGGATTCAGA+TGG | + | chr4.3:29852594-29852613 | MS.gene031651:CDS | 50.0% | |
| GCGTAGTTGTGGAGGATTGT+TGG | - | chr4.3:29851025-29851044 | None:intergenic | 50.0% | |
| GGCAATAGTTACACGACCAG+AGG | - | chr4.3:29853034-29853053 | None:intergenic | 50.0% | |
| GGTGGGGCTGTAAAGTTTCT+GGG | + | chr4.3:29852065-29852084 | MS.gene031651:CDS | 50.0% | |
| GTATGTCTTCTGTGCTCCAG+AGG | + | chr4.3:29852983-29853002 | MS.gene031651:intron | 50.0% | |
| GTTACACGACCAGAGGTCAA+AGG | - | chr4.3:29853027-29853046 | None:intergenic | 50.0% | |
| GTTGTGGAGGATTGTTGGTG+CGG | - | chr4.3:29851020-29851039 | None:intergenic | 50.0% | |
| TAAGGCAAGCGTAGTTGTGG+AGG | - | chr4.3:29851033-29851052 | None:intergenic | 50.0% | |
| TACACGACCAGAGGTCAAAG+GGG | - | chr4.3:29853025-29853044 | None:intergenic | 50.0% | |
| TAGCTCTCAGCCACTTGTCA+TGG | - | chr4.3:29852103-29852122 | None:intergenic | 50.0% | |
| TCGGTGGTGCAGCAAATGTA+AGG | + | chr4.3:29852377-29852396 | MS.gene031651:intron | 50.0% | |
| TCTCCTCTGCAGGATGTCTT+AGG | + | chr4.3:29855759-29855778 | MS.gene031651:intron | 50.0% | |
| TTCTTAGCCCCTTTGACCTC+TGG | + | chr4.3:29853015-29853034 | MS.gene031651:CDS | 50.0% | |
| ! | AAGATCGCGACTGGCTATTC+GGG | + | chr4.3:29851140-29851159 | MS.gene031651:CDS | 50.0% |
| ! | ATCGTGGTGTTTTTCGTGGG+TGG | + | chr4.3:29851290-29851309 | MS.gene031651:CDS | 50.0% |
| ! | CTATGTCTGAGTTGGGCCAT+GGG | + | chr4.3:29852153-29852172 | MS.gene031651:CDS | 50.0% |
| ! | GAAGATCGCGACTGGCTATT+CGG | + | chr4.3:29851139-29851158 | MS.gene031651:CDS | 50.0% |
| ! | GAGGAAGTTGGCTCTTCATG+AGG | + | chr4.3:29851342-29851361 | MS.gene031651:CDS | 50.0% |
| ! | GAGTGATTTTCACAGGTCCG+AGG | + | chr4.3:29852271-29852290 | MS.gene031651:intron | 50.0% |
| ! | GTAGCAGGTTCTGATGCAGT+AGG | + | chr4.3:29854091-29854110 | MS.gene031651:intron | 50.0% |
| ! | GTTTTTCGTGGGTGGCTTAC+TGG | + | chr4.3:29851298-29851317 | MS.gene031651:CDS | 50.0% |
| ! | TAAGCATGTGGCAGCTTTGG+TGG | - | chr4.3:29851665-29851684 | None:intergenic | 50.0% |
| !! | ACTAAGTGGGGTTGGCTACA+CGG | - | chr4.3:29851620-29851639 | None:intergenic | 50.0% |
| !! | CCAGAGTTATCAGCTTGCTG+AGG | + | chr4.3:29855534-29855553 | MS.gene031651:intron | 50.0% |
| !! | GCTCAGAAGTATTGGATCGG+TGG | + | chr4.3:29852361-29852380 | MS.gene031651:CDS | 50.0% |
| !! | TTTGATTCGGAGAGTTCGGG+AGG | - | chr4.3:29851064-29851083 | None:intergenic | 50.0% |
| ACATATATGAGCCGCAGGGC+AGG | - | chr4.3:29853562-29853581 | None:intergenic | 55.0% | |
| ACCAAGCCACTAAGTGGGGT+TGG | - | chr4.3:29851628-29851647 | None:intergenic | 55.0% | |
| AGGATTGTTGGTGCGGTTGG+TGG | - | chr4.3:29851013-29851032 | None:intergenic | 55.0% | |
| CAGGAATGCCGTGAAGCATG+TGG | + | chr4.3:29853919-29853938 | MS.gene031651:intron | 55.0% | |
| CCAAGCGTCACCATGACAAG+TGG | + | chr4.3:29852090-29852109 | MS.gene031651:CDS | 55.0% | |
| CCTGTCCTCCACATGCTTCA+CGG | - | chr4.3:29853930-29853949 | None:intergenic | 55.0% | |
| CGTGAAGCATGTGGAGGACA+GGG | + | chr4.3:29853928-29853947 | MS.gene031651:CDS | 55.0% | |
| CTGGCTGGACATCTGACTTC+AGG | + | chr4.3:29852770-29852789 | MS.gene031651:intron | 55.0% | |
| GAATGCCGTGAAGCATGTGG+AGG | + | chr4.3:29853922-29853941 | MS.gene031651:CDS | 55.0% | |
| GAGGTGATTGGTGAGGATGG+TGG | - | chr4.3:29850981-29851000 | None:intergenic | 55.0% | |
| GCTCTTGGACGGTCACAATC+TGG | + | chr4.3:29851117-29851136 | MS.gene031651:CDS | 55.0% | |
| GCTGAGTCAGCTTTACCAGC+CGG | + | chr4.3:29855607-29855626 | MS.gene031651:CDS | 55.0% | |
| GCTGTAGCACTGTTGCGTAG+TGG | + | chr4.3:29855009-29855028 | MS.gene031651:intron | 55.0% | |
| GGATTGTTGGTGCGGTTGGT+GGG | - | chr4.3:29851012-29851031 | None:intergenic | 55.0% | |
| GGGTGGGGCTGTAAAGTTTC+TGG | + | chr4.3:29852064-29852083 | MS.gene031651:CDS | 55.0% | |
| GTGTAGCCAACCCCACTTAG+TGG | + | chr4.3:29851619-29851638 | MS.gene031651:intron | 55.0% | |
| GTTCGGGAGGAGAGTAGCTA+AGG | - | chr4.3:29851051-29851070 | None:intergenic | 55.0% | |
| TGGACAACAACCGCATCACC+TGG | + | chr4.3:29850951-29850970 | MS.gene031651:CDS | 55.0% | |
| TGGAGGATTGTTGGTGCGGT+TGG | - | chr4.3:29851016-29851035 | None:intergenic | 55.0% | |
| ! | ACTTGGTGAAACGTCGGCCA+CGG | - | chr4.3:29852836-29852855 | None:intergenic | 55.0% |
| ! | CCACTTGTCATGGTGACGCT+TGG | - | chr4.3:29852093-29852112 | None:intergenic | 55.0% |
| ! | GCTATGTCTGAGTTGGGCCA+TGG | + | chr4.3:29852152-29852171 | MS.gene031651:CDS | 55.0% |
| ! | GTAGGCTACTGGCCTCACTA+AGG | + | chr4.3:29853878-29853897 | MS.gene031651:intron | 55.0% |
| !! | AGAGCGGACTATTCAACCGG+CGG | + | chr4.3:29851173-29851192 | MS.gene031651:CDS | 55.0% |
| CACACGTGCGTGCACTGAGA+AGG | - | chr4.3:29855672-29855691 | None:intergenic | 60.0% | |
| CCGTGAAGCATGTGGAGGAC+AGG | + | chr4.3:29853927-29853946 | MS.gene031651:CDS | 60.0% | |
| CGTGGGTGGCTTACTGGTGA+TGG | + | chr4.3:29851304-29851323 | MS.gene031651:CDS | 60.0% | |
| GCCAACCCCACTTAGTGGCT+TGG | + | chr4.3:29851624-29851643 | MS.gene031651:intron | 60.0% | |
| GCGGAGGTGATTGGTGAGGA+TGG | - | chr4.3:29850984-29851003 | None:intergenic | 60.0% | |
| GTGGCCGACGTTTCACCAAG+TGG | + | chr4.3:29852835-29852854 | MS.gene031651:CDS | 60.0% | |
| TCGACCGCATGCACTTGCCT+TGG | + | chr4.3:29855908-29855927 | MS.gene031651:CDS | 60.0% | |
| TGGTGGTTCGCCAGGTGATG+CGG | - | chr4.3:29850964-29850983 | None:intergenic | 60.0% | |
| TTCAACCGGCGGGAAGTCGA+CGG | + | chr4.3:29851184-29851203 | MS.gene031651:CDS | 60.0% | |
| !! | GAGCGGACTATTCAACCGGC+GGG | + | chr4.3:29851174-29851193 | MS.gene031651:CDS | 60.0% |
| ! | CGTGGCGGAGGTGATTGGTG+AGG | - | chr4.3:29850988-29851007 | None:intergenic | 65.0% |
| ! | GGTGAGGATGGTGGTTCGCC+AGG | - | chr4.3:29850972-29850991 | None:intergenic | 65.0% |
| ! | TGGGTCGTGGCGGAGGTGAT+TGG | - | chr4.3:29850993-29851012 | None:intergenic | 65.0% |
| !! | TTGGTGCGGTTGGTGGGTCG+TGG | - | chr4.3:29851006-29851025 | None:intergenic | 65.0% |
| !! | GTGCGGTTGGTGGGTCGTGG+CGG | - | chr4.3:29851003-29851022 | None:intergenic | 70.0% |
| ACCGGCGGGAAGTCGACGGC+AGG | + | chr4.3:29851188-29851207 | MS.gene031651:CDS | 75.0% | |
| CCGGCGGGAAGTCGACGGCA+GGG | + | chr4.3:29851189-29851208 | MS.gene031651:CDS | 75.0% | |
| !! | CCCTGCCGTCGACTTCCCGC+CGG | - | chr4.3:29851192-29851211 | None:intergenic | 75.0% |
| !! | CGGTTGGTGGGTCGTGGCGG+AGG | - | chr4.3:29851000-29851019 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 29850950 | 29856019 | 29850950 | ID=MS.gene031651 |
| chr4.3 | mRNA | 29850950 | 29856019 | 29850950 | ID=MS.gene031651.t1;Parent=MS.gene031651 |
| chr4.3 | exon | 29850950 | 29851422 | 29850950 | ID=MS.gene031651.t1.exon1;Parent=MS.gene031651.t1 |
| chr4.3 | CDS | 29850950 | 29851422 | 29850950 | ID=cds.MS.gene031651.t1;Parent=MS.gene031651.t1 |
| chr4.3 | exon | 29852064 | 29852181 | 29852064 | ID=MS.gene031651.t1.exon2;Parent=MS.gene031651.t1 |
| chr4.3 | CDS | 29852064 | 29852181 | 29852064 | ID=cds.MS.gene031651.t1;Parent=MS.gene031651.t1 |
| chr4.3 | exon | 29852286 | 29852393 | 29852286 | ID=MS.gene031651.t1.exon3;Parent=MS.gene031651.t1 |
| chr4.3 | CDS | 29852286 | 29852393 | 29852286 | ID=cds.MS.gene031651.t1;Parent=MS.gene031651.t1 |
| chr4.3 | exon | 29852522 | 29852694 | 29852522 | ID=MS.gene031651.t1.exon4;Parent=MS.gene031651.t1 |
| chr4.3 | CDS | 29852522 | 29852694 | 29852522 | ID=cds.MS.gene031651.t1;Parent=MS.gene031651.t1 |
| chr4.3 | exon | 29852792 | 29852891 | 29852792 | ID=MS.gene031651.t1.exon5;Parent=MS.gene031651.t1 |
| chr4.3 | CDS | 29852792 | 29852891 | 29852792 | ID=cds.MS.gene031651.t1;Parent=MS.gene031651.t1 |
| chr4.3 | exon | 29853003 | 29853077 | 29853003 | ID=MS.gene031651.t1.exon6;Parent=MS.gene031651.t1 |
| chr4.3 | CDS | 29853003 | 29853077 | 29853003 | ID=cds.MS.gene031651.t1;Parent=MS.gene031651.t1 |
| chr4.3 | exon | 29853198 | 29853328 | 29853198 | ID=MS.gene031651.t1.exon7;Parent=MS.gene031651.t1 |
| chr4.3 | CDS | 29853198 | 29853328 | 29853198 | ID=cds.MS.gene031651.t1;Parent=MS.gene031651.t1 |
| chr4.3 | exon | 29853697 | 29853832 | 29853697 | ID=MS.gene031651.t1.exon8;Parent=MS.gene031651.t1 |
| chr4.3 | CDS | 29853697 | 29853832 | 29853697 | ID=cds.MS.gene031651.t1;Parent=MS.gene031651.t1 |
| chr4.3 | exon | 29853922 | 29854041 | 29853922 | ID=MS.gene031651.t1.exon9;Parent=MS.gene031651.t1 |
| chr4.3 | CDS | 29853922 | 29854041 | 29853922 | ID=cds.MS.gene031651.t1;Parent=MS.gene031651.t1 |
| chr4.3 | exon | 29855118 | 29855264 | 29855118 | ID=MS.gene031651.t1.exon10;Parent=MS.gene031651.t1 |
| chr4.3 | CDS | 29855118 | 29855264 | 29855118 | ID=cds.MS.gene031651.t1;Parent=MS.gene031651.t1 |
| chr4.3 | exon | 29855353 | 29855457 | 29855353 | ID=MS.gene031651.t1.exon11;Parent=MS.gene031651.t1 |
| chr4.3 | CDS | 29855353 | 29855457 | 29855353 | ID=cds.MS.gene031651.t1;Parent=MS.gene031651.t1 |
| chr4.3 | exon | 29855538 | 29855639 | 29855538 | ID=MS.gene031651.t1.exon12;Parent=MS.gene031651.t1 |
| chr4.3 | CDS | 29855538 | 29855639 | 29855538 | ID=cds.MS.gene031651.t1;Parent=MS.gene031651.t1 |
| chr4.3 | exon | 29855771 | 29856019 | 29855771 | ID=MS.gene031651.t1.exon13;Parent=MS.gene031651.t1 |
| chr4.3 | CDS | 29855771 | 29856019 | 29855771 | ID=cds.MS.gene031651.t1;Parent=MS.gene031651.t1 |
| Gene Sequence |
| Protein sequence |
