Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071514.t1 | XP_003607535.1 | 95.5 | 596 | 24 | 2 | 1 | 593 | 54 | 649 | 0.00E+00 | 1129.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071514.t1 | P0CZ23 | 72.8 | 596 | 159 | 2 | 1 | 593 | 53 | 648 | 1.2e-260 | 900.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071514.t1 | G7JUZ2 | 95.5 | 596 | 24 | 2 | 1 | 593 | 54 | 649 | 0.0e+00 | 1129.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene73859 | MS.gene071514 | PPI |
MS.gene071514 | MS.gene71970 | PPI |
MS.gene28100 | MS.gene071514 | PPI |
MS.gene011553 | MS.gene071514 | PPI |
MS.gene071514 | MS.gene71971 | PPI |
MS.gene071514 | MS.gene045538 | PPI |
MS.gene071514 | MS.gene21220 | PPI |
MS.gene071514 | MS.gene09756 | PPI |
MS.gene015408 | MS.gene071514 | PPI |
MS.gene071514 | MS.gene57427 | PPI |
MS.gene071513 | MS.gene071514 | PPI |
MS.gene031651 | MS.gene071514 | PPI |
MS.gene071514 | MS.gene006655 | PPI |
MS.gene071514 | MS.gene61306 | PPI |
MS.gene72596 | MS.gene071514 | PPI |
MS.gene045541 | MS.gene071514 | PPI |
MS.gene071514 | MS.gene030781 | PPI |
MS.gene045536 | MS.gene071514 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071514.t1 | MTR_4g079290 | 95.470 | 596 | 24 | 2 | 1 | 593 | 54 | 649 | 0.0 | 1170 |
MS.gene071514.t1 | MTR_8g090375 | 36.532 | 594 | 332 | 14 | 29 | 587 | 68 | 651 | 1.48e-111 | 349 |
MS.gene071514.t1 | MTR_5g012920 | 31.489 | 524 | 301 | 16 | 105 | 593 | 103 | 603 | 2.78e-69 | 236 |
MS.gene071514.t1 | MTR_4g100640 | 29.787 | 517 | 319 | 14 | 105 | 593 | 103 | 603 | 1.22e-61 | 216 |
MS.gene071514.t1 | MTR_4g100640 | 35.224 | 335 | 198 | 7 | 105 | 424 | 103 | 433 | 4.87e-58 | 203 |
MS.gene071514.t1 | MTR_6g464330 | 91.803 | 61 | 5 | 0 | 20 | 80 | 1 | 61 | 4.86e-33 | 120 |
MS.gene071514.t1 | MTR_2g033680 | 85.714 | 42 | 6 | 0 | 54 | 95 | 3 | 44 | 4.25e-18 | 79.7 |
MS.gene071514.t1 | MTR_7g068850 | 22.581 | 372 | 241 | 11 | 47 | 416 | 79 | 405 | 2.37e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071514.t1 | AT1G06290 | 72.819 | 596 | 159 | 2 | 1 | 593 | 53 | 648 | 0.0 | 931 |
MS.gene071514.t1 | AT1G06310 | 70.134 | 596 | 175 | 2 | 1 | 593 | 53 | 648 | 0.0 | 897 |
MS.gene071514.t1 | AT5G65110 | 38.354 | 571 | 315 | 13 | 44 | 587 | 95 | 655 | 2.72e-112 | 351 |
MS.gene071514.t1 | AT5G65110 | 38.889 | 558 | 304 | 13 | 44 | 574 | 95 | 642 | 1.10e-111 | 348 |
MS.gene071514.t1 | AT4G16760 | 31.202 | 516 | 313 | 14 | 105 | 593 | 90 | 590 | 8.33e-64 | 221 |
MS.gene071514.t1 | AT4G16760 | 31.202 | 516 | 313 | 14 | 105 | 593 | 103 | 603 | 1.14e-63 | 221 |
MS.gene071514.t1 | AT2G35690 | 29.367 | 521 | 327 | 14 | 98 | 593 | 99 | 603 | 1.03e-59 | 211 |
MS.gene071514.t1 | AT3G06690 | 63.571 | 140 | 51 | 0 | 454 | 593 | 21 | 160 | 2.90e-57 | 191 |
Find 139 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCAGCTATTCGGATATT+TGG | 0.062882 | 4.2:+30938762 | None:intergenic |
AAACCGTATTGGTCAATTTA+AGG | 0.139356 | 4.2:-30937427 | MS.gene071514:CDS |
GGGCGGGGCTGTTAAGTTTC+TGG | 0.167839 | 4.2:-30939325 | MS.gene071514:CDS |
ATGACAAACTCACCAGAATT+TGG | 0.201015 | 4.2:+30939070 | None:intergenic |
GGTCACAAAATTGGTTTAAA+TGG | 0.204440 | 4.2:-30938738 | MS.gene071514:CDS |
CATCAAGAGCAGTGAATTTC+AGG | 0.216438 | 4.2:-30936149 | MS.gene071514:intron |
GCTGAATGTGGTCACAAAAT+TGG | 0.219965 | 4.2:-30938747 | MS.gene071514:CDS |
TTGGCTCTTCATGAGGTTAT+TGG | 0.237880 | 4.2:-30940055 | MS.gene071514:CDS |
AGCAATACTGAAAACATTTA+TGG | 0.246846 | 4.2:-30935810 | MS.gene071514:CDS |
TTCCATCTGAATCCCTGATT+TGG | 0.280970 | 4.2:+30938793 | None:intergenic |
GACGCTGCCTTTCTCCGATA+TGG | 0.285263 | 4.2:-30935570 | MS.gene071514:CDS |
TCTCCTCTGCAGGATGTCTT+AGG | 0.292318 | 4.2:-30935633 | MS.gene071514:intron |
CAAATACGCAATTCGTTTCA+TGG | 0.303772 | 4.2:+30940141 | None:intergenic |
TCAATAGGTCTCGCTCTCTT+AGG | 0.305094 | 4.2:+30936025 | None:intergenic |
AAACAAACATTTAAAGGTCT+TGG | 0.307300 | 4.2:-30936229 | MS.gene071514:CDS |
CTGAAATTCACTGCTCTTGA+TGG | 0.308244 | 4.2:+30936150 | None:intergenic |
GCATAATATGCGTACTCTTC+AGG | 0.331572 | 4.2:-30937579 | MS.gene071514:intron |
ATTCAGCTATTCGGATATTT+GGG | 0.337889 | 4.2:+30938763 | None:intergenic |
GGTTTAAATGGAGTTGATAA+TGG | 0.338212 | 4.2:-30938726 | MS.gene071514:CDS |
GAAGATCGCGACTGGCTATT+CGG | 0.342629 | 4.2:-30940265 | MS.gene071514:CDS |
TCCATCTGAATCCCTGATTT+GGG | 0.353613 | 4.2:+30938794 | None:intergenic |
CTTTGAGATGCGAAAGCTCT+TGG | 0.365539 | 4.2:-30940302 | None:intergenic |
GGAATTTAACAAATTCTCTC+TGG | 0.369490 | 4.2:+30938577 | None:intergenic |
TGTGACCACATTCAGCTATT+CGG | 0.372695 | 4.2:+30938754 | None:intergenic |
GAAACGAATTGCGTATTTGT+TGG | 0.373037 | 4.2:-30940137 | MS.gene071514:CDS |
CAACATAAACGGAAGCAATC+AGG | 0.373818 | 4.2:-30938835 | MS.gene071514:CDS |
TTATCAGCTTGCTGAGGACT+TGG | 0.379509 | 4.2:-30935852 | MS.gene071514:CDS |
AACCGTATTGGTCAATTTAA+GGG | 0.379544 | 4.2:-30937426 | MS.gene071514:CDS |
TTCTTAGCCCCTTTGACCTC+TGG | 0.384312 | 4.2:-30938375 | MS.gene071514:CDS |
TCCATGGACTGATTATAATC+AGG | 0.392905 | 4.2:+30940181 | None:intergenic |
AACTTCCTCAACTCTTCTTG+TGG | 0.399283 | 4.2:+30940076 | None:intergenic |
GAGTTGATAATGGCCGTATC+TGG | 0.403465 | 4.2:-30938716 | MS.gene071514:intron |
GGCGGGGCTGTTAAGTTTCT+GGG | 0.406658 | 4.2:-30939324 | MS.gene071514:CDS |
AAGATCGCGACTGGCTATTC+GGG | 0.408048 | 4.2:-30940264 | MS.gene071514:CDS |
GCTCTTGGACGGTCACAATC+TGG | 0.413012 | 4.2:-30940287 | MS.gene071514:CDS |
CATCTCCCTCTGTTGTTCCA+TGG | 0.413358 | 4.2:+30940165 | None:intergenic |
CGAAGTTCAGCACATAGCTT+TGG | 0.414228 | 4.2:+30935504 | None:intergenic |
AGTAAAACCTCAGGCCCATT+TGG | 0.419355 | 4.2:+30938135 | None:intergenic |
ACTACTTATGATCCAAATTC+TGG | 0.419459 | 4.2:-30939082 | MS.gene071514:CDS |
CATTCTCTTGCTGTTAAGCT+TGG | 0.432008 | 4.2:-30940022 | MS.gene071514:CDS |
CCGTGAAGCATGTGGAGGAC+AGG | 0.433137 | 4.2:-30937463 | MS.gene071514:CDS |
ATGATTTACCTTCAATGAAC+CGG | 0.436593 | 4.2:+30935766 | None:intergenic |
ACTTCCTCAACTCTTCTTGT+GGG | 0.444218 | 4.2:+30940077 | None:intergenic |
CTATAGCAAAACGTTTCAAT+AGG | 0.454415 | 4.2:+30936010 | None:intergenic |
CTGTTGACAAGTATCCATAT+CGG | 0.457876 | 4.2:+30935556 | None:intergenic |
CACCCTTAAATTGACCAATA+CGG | 0.463490 | 4.2:+30937424 | None:intergenic |
CGTGGGTGGCTTACTGGTGA+TGG | 0.467490 | 4.2:-30940100 | MS.gene071514:CDS |
ACCGGCGGGAAGTCGACGGC+AGG | 0.473101 | 4.2:-30940216 | MS.gene071514:CDS |
GTAGAACTTGTTAACTGAGA+TGG | 0.473386 | 4.2:+30936172 | None:intergenic |
CCTGTCCTCCACATGCTTCA+CGG | 0.473869 | 4.2:+30937463 | None:intergenic |
TATTGTTTCTAGTGCATACA+AGG | 0.474725 | 4.2:-30937615 | MS.gene071514:CDS |
TGACGTGCATTCAACATTTG+AGG | 0.475703 | 4.2:-30937397 | MS.gene071514:CDS |
GCTATGTCTGAGTTGGGCCA+TGG | 0.475827 | 4.2:-30939237 | MS.gene071514:CDS |
CCCATTTGGTGTAATAGAAA+AGG | 0.481194 | 4.2:+30938149 | None:intergenic |
TTTACCAGCCGGTTCATTGA+AGG | 0.481975 | 4.2:-30935774 | MS.gene071514:intron |
AATAGACGTTGTTGATGACT+TGG | 0.483886 | 4.2:+30938102 | None:intergenic |
TTACACGACCAGAGGTCAAA+GGG | 0.484386 | 4.2:+30938367 | None:intergenic |
GTGAGTCAGCTCAGAAGTAT+TGG | 0.488256 | 4.2:-30939036 | MS.gene071514:CDS |
AACATAAACGGAAGCAATCA+GGG | 0.488638 | 4.2:-30938834 | MS.gene071514:CDS |
CCACTTGTCATGGTGACGCT+TGG | 0.490777 | 4.2:+30939299 | None:intergenic |
TGAATTGCTTTGTTTGACTC+AGG | 0.494253 | 4.2:+30937638 | None:intergenic |
AATGTATATATTACCAGATA+CGG | 0.501138 | 4.2:+30938703 | None:intergenic |
TACTGAAAACTATGACATCA+AGG | 0.503788 | 4.2:-30939268 | MS.gene071514:CDS |
ACTTACATCTTCGCAAGTAA+AGG | 0.511759 | 4.2:+30938078 | None:intergenic |
TACAGAGCGGACTATTCAAC+CGG | 0.511916 | 4.2:-30940234 | MS.gene071514:CDS |
GTCAAAACTGAAAACCGTAT+TGG | 0.515495 | 4.2:-30937438 | MS.gene071514:CDS |
GACGTGCATTCAACATTTGA+GGG | 0.516195 | 4.2:-30937396 | MS.gene071514:CDS |
CTATGTCTGAGTTGGGCCAT+GGG | 0.517623 | 4.2:-30939236 | MS.gene071514:CDS |
TCGACCGCATGCACTTGCCT+TGG | 0.518895 | 4.2:-30935484 | None:intergenic |
GAATTTAACAAATTCTCTCT+GGG | 0.518948 | 4.2:+30938578 | None:intergenic |
TAGTGACAGTTTCAATTCCT+CGG | 0.521777 | 4.2:+30939101 | None:intergenic |
ACAAGAAGAGTTGAGGAAGT+TGG | 0.529170 | 4.2:-30940074 | MS.gene071514:CDS |
AGAGAATTTGTTAAATTCCG+TGG | 0.536973 | 4.2:-30938573 | MS.gene071514:CDS |
ATTAATGGATTTCAGGGGCG+GGG | 0.549317 | 4.2:-30939340 | MS.gene071514:intron |
GTCTTCGTCCACACTAATCA+AGG | 0.553624 | 4.2:+30935590 | None:intergenic |
CAAGTATCCATATCGGAGAA+AGG | 0.554145 | 4.2:+30935563 | None:intergenic |
TATCAGCTTGCTGAGGACTT+GGG | 0.556480 | 4.2:-30935851 | MS.gene071514:CDS |
AAGATATGCATTGACAAGGC+GGG | 0.561218 | 4.2:-30938172 | MS.gene071514:CDS |
TAATCAAGCAGTAAAACCTC+AGG | 0.564610 | 4.2:+30938126 | None:intergenic |
GCTGAGTCAGCTTTACCAGC+CGG | 0.565138 | 4.2:-30935785 | MS.gene071514:CDS |
CGTGAAGCATGTGGAGGACA+GGG | 0.565627 | 4.2:-30937462 | MS.gene071514:CDS |
GCACTCAAGTATTCACCACT+TGG | 0.565645 | 4.2:+30938539 | None:intergenic |
ATAGGTCTCGCTCTCTTAGG+TGG | 0.569715 | 4.2:+30936028 | None:intergenic |
GTTAACTGAGATGGGATGAC+AGG | 0.572425 | 4.2:+30936181 | None:intergenic |
CAGAAAATGCTTCTGTAGTG+AGG | 0.573670 | 4.2:-30935536 | MS.gene071514:CDS |
GTTATATGCCTTGATTAGTG+TGG | 0.574945 | 4.2:-30935598 | MS.gene071514:CDS |
CAACAATGTTCTGATGCAGC+AGG | 0.578536 | 4.2:-30937370 | MS.gene071514:intron |
TAGGGTCCTCACTAGAATGA+AGG | 0.579053 | 4.2:+30935945 | None:intergenic |
ACTTGGTGAAACGTCGGCCA+CGG | 0.579741 | 4.2:+30938556 | None:intergenic |
GAGGAAGTTGGCTCTTCATG+AGG | 0.581295 | 4.2:-30940062 | MS.gene071514:CDS |
GTTTCAGAACATCAATCTCA+AGG | 0.581478 | 4.2:-30935985 | MS.gene071514:CDS |
TTTACCTTCAATGAACCGGC+TGG | 0.583384 | 4.2:+30935770 | None:intergenic |
TTGGTGTTCATATCTTCTTG+TGG | 0.583806 | 4.2:-30940003 | MS.gene071514:intron |
GTTACACGACCAGAGGTCAA+AGG | 0.585021 | 4.2:+30938366 | None:intergenic |
CAGTTCTGTTTACATCTCCA+AGG | 0.586786 | 4.2:-30938334 | MS.gene071514:intron |
TCCTGATTATAATCAGTCCA+TGG | 0.588638 | 4.2:-30940182 | MS.gene071514:CDS |
CAATGCATATCTTATAGCAA+TGG | 0.589002 | 4.2:+30938182 | None:intergenic |
TAGAACTTGTTAACTGAGAT+GGG | 0.593873 | 4.2:+30936173 | None:intergenic |
TTCAACCGGCGGGAAGTCGA+CGG | 0.594950 | 4.2:-30940220 | MS.gene071514:CDS |
GAGATGCGAAAGCTCTTGGA+CGG | 0.595446 | 4.2:-30940298 | MS.gene071514:CDS |
ACAATCTGGAAGATCGCGAC+TGG | 0.598438 | 4.2:-30940273 | MS.gene071514:CDS |
GAGCGGACTATTCAACCGGC+GGG | 0.599185 | 4.2:-30940230 | MS.gene071514:CDS |
ATAGACGTTGTTGATGACTT+GGG | 0.603339 | 4.2:+30938103 | None:intergenic |
GTGGCCGACGTTTCACCAAG+TGG | 0.604648 | 4.2:-30938554 | MS.gene071514:CDS |
TAGCTCTCAACCACTTGTCA+TGG | 0.605157 | 4.2:+30939289 | None:intergenic |
TATTACACCAAATGGGCCTG+AGG | 0.613456 | 4.2:-30938142 | MS.gene071514:CDS |
CAGGAATGCCGTGAAGCATG+TGG | 0.614384 | 4.2:-30937471 | MS.gene071514:CDS |
TCAGTCCATGGAACAACAGA+GGG | 0.615909 | 4.2:-30940170 | MS.gene071514:CDS |
GCCCAAATCAGGGATTCAGA+TGG | 0.621638 | 4.2:-30938795 | MS.gene071514:CDS |
CCGGCGGGAAGTCGACGGCA+GGG | 0.623639 | 4.2:-30940215 | MS.gene071514:CDS |
ATGGCCCACAAGAAGAGTTG+AGG | 0.628054 | 4.2:-30940081 | MS.gene071514:CDS |
CCCTGCCGTCGACTTCCCGC+CGG | 0.629419 | 4.2:+30940215 | None:intergenic |
CTATAAGATATGCATTGACA+AGG | 0.632074 | 4.2:-30938176 | MS.gene071514:CDS |
TCAATCTCAAGGAAATAGCA+AGG | 0.632456 | 4.2:-30935974 | MS.gene071514:CDS |
TACTTCTGAGCTGACTCACA+CGG | 0.633462 | 4.2:+30939040 | None:intergenic |
ATTGCGTATTTGTTGGATCG+TGG | 0.635615 | 4.2:-30940130 | MS.gene071514:CDS |
CTTCACATACATTACTCCCA+TGG | 0.638446 | 4.2:+30939220 | None:intergenic |
GCTCAGAAGTATTGGATCGG+TGG | 0.639509 | 4.2:-30939028 | MS.gene071514:CDS |
AATACTGAAAACATTTATGG+AGG | 0.640785 | 4.2:-30935807 | MS.gene071514:CDS |
ACTGAAAACTATGACATCAA+GGG | 0.641587 | 4.2:-30939267 | MS.gene071514:CDS |
ACGTGCATTCAACATTTGAG+GGG | 0.643157 | 4.2:-30937395 | MS.gene071514:CDS |
CCAAGCGTCACCATGACAAG+TGG | 0.645261 | 4.2:-30939299 | MS.gene071514:CDS |
CGTGCATTCAACATTTGAGG+GGG | 0.650995 | 4.2:-30937394 | MS.gene071514:CDS |
TCAGCTCAGAAGTATTGGAT+CGG | 0.652959 | 4.2:-30939031 | MS.gene071514:CDS |
GACATGCTATGTATTCTGCA+AGG | 0.654350 | 4.2:+30936259 | None:intergenic |
CCAGAGTTATCAGCTTGCTG+AGG | 0.658447 | 4.2:-30935858 | MS.gene071514:intron |
ACATAAACGGAAGCAATCAG+GGG | 0.662941 | 4.2:-30938833 | MS.gene071514:CDS |
AATATCCGAATAGCTGAATG+TGG | 0.664029 | 4.2:-30938759 | MS.gene071514:CDS |
TTAACCAAGGCAAGTGCATG+CGG | 0.664341 | 4.2:+30935480 | None:intergenic |
TAAGATATGCATTGACAAGG+CGG | 0.666215 | 4.2:-30938173 | MS.gene071514:CDS |
ATCAGTCCATGGAACAACAG+AGG | 0.666691 | 4.2:-30940171 | MS.gene071514:CDS |
CTTGGATTAGAACATATGAA+CGG | 0.667047 | 4.2:-30936211 | MS.gene071514:CDS |
TGCAATAGTTACACGACCAG+AGG | 0.670698 | 4.2:+30938359 | None:intergenic |
GAATGCCGTGAAGCATGTGG+AGG | 0.676248 | 4.2:-30937468 | MS.gene071514:CDS |
TTCACCACTTGGTGAAACGT+CGG | 0.679084 | 4.2:+30938550 | None:intergenic |
AGAGCGGACTATTCAACCGG+CGG | 0.689517 | 4.2:-30940231 | MS.gene071514:CDS |
TACACGACCAGAGGTCAAAG+GGG | 0.719846 | 4.2:+30938368 | None:intergenic |
CATAAACGGAAGCAATCAGG+GGG | 0.721408 | 4.2:-30938832 | MS.gene071514:CDS |
TTCGGGTTGATGATACAGAG+CGG | 0.759200 | 4.2:-30940247 | MS.gene071514:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAGTTTATTTGAAAAA+TGG | - | chr4.2:30936396-30936415 | MS.gene071514:intron | 10.0% |
!! | AAATAAATTCATTTATTATC+AGG | + | chr4.2:30937121-30937140 | None:intergenic | 10.0% |
!! | AATTAAAAAAGATATAAAAC+AGG | + | chr4.2:30939106-30939125 | None:intergenic | 10.0% |
!!! | AAATTAAACTTTAATTTACA+AGG | - | chr4.2:30936062-30936081 | MS.gene071514:intron | 10.0% |
!! | AAAATAGAGAAATAATCATA+TGG | - | chr4.2:30938742-30938761 | MS.gene071514:CDS | 15.0% |
!! | ATCATCATAACATAAAAATA+AGG | + | chr4.2:30935823-30935842 | None:intergenic | 15.0% |
!! | TAGAAATATTATTAAAGTGA+CGG | + | chr4.2:30936642-30936661 | None:intergenic | 15.0% |
!! | TATAACAAGAAAAAAAATGA+TGG | - | chr4.2:30936330-30936349 | MS.gene071514:intron | 15.0% |
!! | TTTAATTATACCTTTAATCA+TGG | - | chr4.2:30939119-30939138 | MS.gene071514:intron | 15.0% |
!!! | ATTTTTTAATTTATGTTCAG+AGG | - | chr4.2:30937848-30937867 | MS.gene071514:intron | 15.0% |
!!! | TTGTTCATTTTTTTATATCT+AGG | - | chr4.2:30936297-30936316 | MS.gene071514:intron | 15.0% |
!!! | TTTAGTTTCTTTATGATTAA+TGG | - | chr4.2:30936425-30936444 | MS.gene071514:intron | 15.0% |
!!! | TTTCAAATAAACTTTTTTGA+GGG | + | chr4.2:30936394-30936413 | None:intergenic | 15.0% |
!!! | TTTTCAAATAAACTTTTTTG+AGG | + | chr4.2:30936395-30936414 | None:intergenic | 15.0% |
!! | AAATCATAATAAACTACATG+TGG | + | chr4.2:30936614-30936633 | None:intergenic | 20.0% |
!! | AAGAAACATTTCATTTAACA+AGG | + | chr4.2:30936171-30936190 | None:intergenic | 20.0% |
!! | AATAAACAATAAGAGTGATA+TGG | + | chr4.2:30938939-30938958 | None:intergenic | 20.0% |
!! | AATGTATATATTACCAGATA+CGG | + | chr4.2:30937080-30937099 | None:intergenic | 20.0% |
!! | AGAAATATTATTAAAGTGAC+GGG | + | chr4.2:30936641-30936660 | None:intergenic | 20.0% |
!! | AGATTTAGAGATTAATGAAT+TGG | - | chr4.2:30935930-30935949 | MS.gene071514:intron | 20.0% |
!! | ATCATCAGAAGATATAATAA+TGG | - | chr4.2:30938029-30938048 | MS.gene071514:intron | 20.0% |
!! | ATGAAATCACATCAAATTAT+AGG | + | chr4.2:30936213-30936232 | None:intergenic | 20.0% |
!! | GACAAAAAACAAACATTTAA+AGG | - | chr4.2:30939545-30939564 | MS.gene071514:intron | 20.0% |
!! | GATATAAAATGCATGTATTA+GGG | + | chr4.2:30937729-30937748 | None:intergenic | 20.0% |
!! | GTAAATCATATTATTGCTTA+TGG | - | chr4.2:30940028-30940047 | MS.gene071514:CDS | 20.0% |
!! | TAATGTAAGATGTTAAAGTT+TGG | + | chr4.2:30937542-30937561 | None:intergenic | 20.0% |
!! | TACAAAATATTGTGAAATAG+CGG | - | chr4.2:30939365-30939384 | MS.gene071514:intron | 20.0% |
!! | TATATGTAGTTAGATTGTTT+GGG | - | chr4.2:30936822-30936841 | MS.gene071514:intron | 20.0% |
!!! | AATTGCATTTTACATTTTAC+TGG | - | chr4.2:30938714-30938733 | MS.gene071514:intron | 20.0% |
!!! | AGCTTCTTTTATATTTTCTT+AGG | + | chr4.2:30935902-30935921 | None:intergenic | 20.0% |
!!! | GTCTTTCTCTTTTATATTAT+CGG | + | chr4.2:30935880-30935899 | None:intergenic | 20.0% |
!!! | TAAACTTTAATTTACAAGGT+AGG | - | chr4.2:30936066-30936085 | MS.gene071514:intron | 20.0% |
!!! | TAAAGTTTAATTTAAGCATG+TGG | + | chr4.2:30936055-30936074 | None:intergenic | 20.0% |
!!! | TTCAAATAAACTTTTTTGAG+GGG | + | chr4.2:30936393-30936412 | None:intergenic | 20.0% |
!!! | TTCATTTTTTTATATCTAGG+TGG | - | chr4.2:30936300-30936319 | MS.gene071514:intron | 20.0% |
!!! | TTTATGATTAATGGATTTCA+GGG | - | chr4.2:30936434-30936453 | MS.gene071514:intron | 20.0% |
!!! | TTTTAAGTTTGACACATAAT+TGG | - | chr4.2:30936145-30936164 | MS.gene071514:intron | 20.0% |
!!! | TTTTGTTTGTTGTTAAATAG+TGG | - | chr4.2:30939277-30939296 | MS.gene071514:CDS | 20.0% |
! | AAACAAACATTTAAAGGTCT+TGG | - | chr4.2:30939551-30939570 | MS.gene071514:intron | 25.0% |
! | AACCTCATAATAACATTATG+AGG | + | chr4.2:30937828-30937847 | None:intergenic | 25.0% |
! | AAGTCAAATAGTAATAGACT+GGG | + | chr4.2:30939080-30939099 | None:intergenic | 25.0% |
! | AATACTGAAAACATTTATGG+AGG | - | chr4.2:30939973-30939992 | MS.gene071514:intron | 25.0% |
! | AATGATTCCATCTTTATATG+TGG | - | chr4.2:30937470-30937489 | MS.gene071514:CDS | 25.0% |
! | AATTGTTCAATACTACTTCA+TGG | + | chr4.2:30939227-30939246 | None:intergenic | 25.0% |
! | ACCTCATAATAACATTATGA+GGG | + | chr4.2:30937827-30937846 | None:intergenic | 25.0% |
! | AGCAATACTGAAAACATTTA+TGG | - | chr4.2:30939970-30939989 | MS.gene071514:intron | 25.0% |
! | ATCTAACAACAGAAAATGAA+AGG | + | chr4.2:30937570-30937589 | None:intergenic | 25.0% |
! | ATGTAAGCAAACTTTGTAAT+TGG | + | chr4.2:30937344-30937363 | None:intergenic | 25.0% |
! | ATTGTTCAATACTACTTCAT+GGG | + | chr4.2:30939226-30939245 | None:intergenic | 25.0% |
! | CAAACAATCTAACTACATAT+AGG | + | chr4.2:30936823-30936842 | None:intergenic | 25.0% |
! | CTATATGTAGTTAGATTGTT+TGG | - | chr4.2:30936821-30936840 | MS.gene071514:intron | 25.0% |
! | GAATTTAACAAATTCTCTCT+GGG | + | chr4.2:30937205-30937224 | None:intergenic | 25.0% |
! | GATAAATAAATCATCTAAGG+TGG | + | chr4.2:30936370-30936389 | None:intergenic | 25.0% |
! | GGATATAAAATGCATGTATT+AGG | + | chr4.2:30937730-30937749 | None:intergenic | 25.0% |
! | TAACAACAAACAAAAATGAG+TGG | + | chr4.2:30939272-30939291 | None:intergenic | 25.0% |
! | TAATGAATTGGACTGAAATA+TGG | - | chr4.2:30935942-30935961 | MS.gene071514:intron | 25.0% |
! | TCAAAAAGATGTATGTGAAT+AGG | - | chr4.2:30938116-30938135 | MS.gene071514:CDS | 25.0% |
! | TGGTTTATGATAGAACATTA+TGG | - | chr4.2:30935962-30935981 | MS.gene071514:CDS | 25.0% |
! | TTCATATCCACATATAAAGA+TGG | + | chr4.2:30937480-30937499 | None:intergenic | 25.0% |
! | TTCTAATCACTTGAACAAAA+AGG | + | chr4.2:30938909-30938928 | None:intergenic | 25.0% |
!! | AATAATTTGCAAAACGTAGT+AGG | + | chr4.2:30939857-30939876 | None:intergenic | 25.0% |
!! | ACTACATATAGGCTTTTAAA+TGG | + | chr4.2:30936812-30936831 | None:intergenic | 25.0% |
!! | ACTTAACAGTGTTAACTTTT+TGG | - | chr4.2:30938854-30938873 | MS.gene071514:CDS | 25.0% |
!! | ATAATTTGCAAAACGTAGTA+GGG | + | chr4.2:30939856-30939875 | None:intergenic | 25.0% |
!! | TGTGATAGATTGTAATTTGT+AGG | - | chr4.2:30938250-30938269 | MS.gene071514:intron | 25.0% |
!!! | AAAACCAGTTTTGAATTGAA+AGG | + | chr4.2:30938615-30938634 | None:intergenic | 25.0% |
!!! | AAACCAGTTTTGAATTGAAA+GGG | + | chr4.2:30938614-30938633 | None:intergenic | 25.0% |
!!! | CTTTATGATTAATGGATTTC+AGG | - | chr4.2:30936433-30936452 | MS.gene071514:intron | 25.0% |
!!! | TAGACTTGTTTTACTTTATC+TGG | + | chr4.2:30940104-30940123 | None:intergenic | 25.0% |
!!! | TCAAATAAACTTTTTTGAGG+GGG | + | chr4.2:30936392-30936411 | None:intergenic | 25.0% |
!!! | TTATGATTAATGGATTTCAG+GGG | - | chr4.2:30936435-30936454 | MS.gene071514:intron | 25.0% |
AAATGAGTAAACTCAAGTTC+TGG | - | chr4.2:30937142-30937161 | MS.gene071514:intron | 30.0% | |
AAGTTAACACTGTTAAGTGA+AGG | + | chr4.2:30938852-30938871 | None:intergenic | 30.0% | |
AATAGCGAATCACATAACAA+TGG | + | chr4.2:30939343-30939362 | None:intergenic | 30.0% | |
ACTACTTATGATCCAAATTC+TGG | - | chr4.2:30936698-30936717 | MS.gene071514:intron | 30.0% | |
ACTGAAAACTATGACATCAA+GGG | - | chr4.2:30936513-30936532 | MS.gene071514:intron | 30.0% | |
AGATTTCAGCTAAAACATAC+TGG | - | chr4.2:30938964-30938983 | MS.gene071514:intron | 30.0% | |
AGGTCATTACAAATATCAAC+AGG | + | chr4.2:30939676-30939695 | None:intergenic | 30.0% | |
AGTGAAGAATCATTCTTTGT+AGG | - | chr4.2:30938534-30938553 | MS.gene071514:CDS | 30.0% | |
ATGATTTACCTTCAATGAAC+CGG | + | chr4.2:30940017-30940036 | None:intergenic | 30.0% | |
ATTCAGCTATTCGGATATTT+GGG | + | chr4.2:30937020-30937039 | None:intergenic | 30.0% | |
ATTCATAGCCCTTCATTTAA+AGG | + | chr4.2:30936122-30936141 | None:intergenic | 30.0% | |
ATTTAAAGGCTTGAGCTTTA+GGG | + | chr4.2:30936108-30936127 | None:intergenic | 30.0% | |
CAAGTCAAATAGTAATAGAC+TGG | + | chr4.2:30939081-30939100 | None:intergenic | 30.0% | |
CAATGCATATCTTATAGCAA+TGG | + | chr4.2:30937601-30937620 | None:intergenic | 30.0% | |
CAATGTGATTCAAATCCTTT+AGG | - | chr4.2:30937766-30937785 | MS.gene071514:intron | 30.0% | |
CTATAGCAAAACGTTTCAAT+AGG | + | chr4.2:30939773-30939792 | None:intergenic | 30.0% | |
GGAATTTAACAAATTCTCTC+TGG | + | chr4.2:30937206-30937225 | None:intergenic | 30.0% | |
GGGGATAAATAAATCATCTA+AGG | + | chr4.2:30936373-30936392 | None:intergenic | 30.0% | |
GTAAGGAGATTAACATAAAC+AGG | + | chr4.2:30938056-30938075 | None:intergenic | 30.0% | |
GTGCAATAAAAATACAGATC+AGG | - | chr4.2:30937260-30937279 | MS.gene071514:intron | 30.0% | |
TAAAGATGGAATCATTACCT+TGG | + | chr4.2:30937466-30937485 | None:intergenic | 30.0% | |
TACTGAAAACTATGACATCA+AGG | - | chr4.2:30936512-30936531 | MS.gene071514:intron | 30.0% | |
TATCTTCTGATGATCAAACT+AGG | + | chr4.2:30938023-30938042 | None:intergenic | 30.0% | |
TCACATCAAATTATAGGTCT+AGG | + | chr4.2:30936207-30936226 | None:intergenic | 30.0% | |
TCCCTCATAATGTTATTATG+AGG | - | chr4.2:30937823-30937842 | MS.gene071514:intron | 30.0% | |
TGTTGATATTTGTAATGACC+TGG | - | chr4.2:30939675-30939694 | MS.gene071514:intron | 30.0% | |
TTATATCAAATGCTTTCGTC+TGG | + | chr4.2:30937900-30937919 | None:intergenic | 30.0% | |
TTGTTCAATACTACTTCATG+GGG | + | chr4.2:30939225-30939244 | None:intergenic | 30.0% | |
TTTCATATTCAAACAGTGCA+CGG | + | chr4.2:30938588-30938607 | None:intergenic | 30.0% | |
! | AAACCGTATTGGTCAATTTA+AGG | - | chr4.2:30938353-30938372 | MS.gene071514:CDS | 30.0% |
! | AACCGTATTGGTCAATTTAA+GGG | - | chr4.2:30938354-30938373 | MS.gene071514:CDS | 30.0% |
! | ACTTTAATTTACAAGGTAGG+TGG | - | chr4.2:30936069-30936088 | MS.gene071514:intron | 30.0% |
! | CCTTTTCTATTACACCAAAT+GGG | - | chr4.2:30937631-30937650 | MS.gene071514:CDS | 30.0% |
! | CTATAAGATATGCATTGACA+AGG | - | chr4.2:30937604-30937623 | MS.gene071514:CDS | 30.0% |
! | CTTGGATTAGAACATATGAA+CGG | - | chr4.2:30939569-30939588 | MS.gene071514:intron | 30.0% |
! | GGTCACAAAATTGGTTTAAA+TGG | - | chr4.2:30937042-30937061 | MS.gene071514:intron | 30.0% |
! | GTGTTAACTTTTTGGATGAT+TGG | - | chr4.2:30938862-30938881 | MS.gene071514:CDS | 30.0% |
! | TGCATTTTACATTTTACTGG+TGG | - | chr4.2:30938717-30938736 | MS.gene071514:CDS | 30.0% |
! | TTGGAGATAAAACCTACTTT+TGG | - | chr4.2:30938826-30938845 | MS.gene071514:CDS | 30.0% |
! | TTTTCACAGCTCAACATAAA+CGG | - | chr4.2:30936934-30936953 | MS.gene071514:intron | 30.0% |
! | TTTTTATATCTAGGTGGTTG+TGG | - | chr4.2:30936306-30936325 | MS.gene071514:intron | 30.0% |
!! | AGAGAATTTGTTAAATTCCG+TGG | - | chr4.2:30937207-30937226 | MS.gene071514:intron | 30.0% |
!! | ATTGAAACGTTTTGCTATAG+AGG | - | chr4.2:30939773-30939792 | MS.gene071514:intron | 30.0% |
!! | GGTTTAAATGGAGTTGATAA+TGG | - | chr4.2:30937054-30937073 | MS.gene071514:intron | 30.0% |
!! | TAGAACTTGTTAACTGAGAT+GGG | + | chr4.2:30939610-30939629 | None:intergenic | 30.0% |
!! | TATTGTTTCTAGTGCATACA+AGG | - | chr4.2:30938165-30938184 | MS.gene071514:CDS | 30.0% |
!!! | AACCAGTTTTGAATTGAAAG+GGG | + | chr4.2:30938613-30938632 | None:intergenic | 30.0% |
!!! | ATTTCTAGAGTGATTTTCAC+AGG | - | chr4.2:30936655-30936674 | MS.gene071514:intron | 30.0% |
!!! | TTTTATATCCATTTGCTGTG+AGG | - | chr4.2:30937740-30937759 | MS.gene071514:intron | 30.0% |
AAATGCTTTCGTCTGGAAAT+TGG | + | chr4.2:30937893-30937912 | None:intergenic | 35.0% | |
AAATGGGAAATTGTCATCTC+TGG | + | chr4.2:30939149-30939168 | None:intergenic | 35.0% | |
AACAATGTATGAAGTGTAGC+AGG | - | chr4.2:30938466-30938485 | MS.gene071514:intron | 35.0% | |
AACATAAACGGAAGCAATCA+GGG | - | chr4.2:30936946-30936965 | MS.gene071514:intron | 35.0% | |
AAGCTCAAGCCTTTAAATGA+AGG | - | chr4.2:30936110-30936129 | MS.gene071514:intron | 35.0% | |
AAGGAATTTCACATGAGAGA+TGG | - | chr4.2:30939018-30939037 | MS.gene071514:CDS | 35.0% | |
AAGTCCACGGATATCATAAA+TGG | + | chr4.2:30939166-30939185 | None:intergenic | 35.0% | |
AATATCCGAATAGCTGAATG+TGG | - | chr4.2:30937021-30937040 | MS.gene071514:intron | 35.0% | |
ACTTACATCTTCGCAAGTAA+AGG | + | chr4.2:30937705-30937724 | None:intergenic | 35.0% | |
AGCTCAAGCCTTTAAATGAA+GGG | - | chr4.2:30936111-30936130 | MS.gene071514:intron | 35.0% | |
AGTCCACGGATATCATAAAT+GGG | + | chr4.2:30939165-30939184 | None:intergenic | 35.0% | |
ATCCATAGTGTTGTCAATTG+CGG | + | chr4.2:30939453-30939472 | None:intergenic | 35.0% | |
ATGACAAACTCACCAGAATT+TGG | + | chr4.2:30936713-30936732 | None:intergenic | 35.0% | |
ATTCAACTCTTGAGAGTAAC+TGG | - | chr4.2:30938765-30938784 | MS.gene071514:CDS | 35.0% | |
CAAATACGCAATTCGTTTCA+TGG | + | chr4.2:30935642-30935661 | None:intergenic | 35.0% | |
CACCCTTAAATTGACCAATA+CGG | + | chr4.2:30938359-30938378 | None:intergenic | 35.0% | |
CATTCAGCTATTCGGATATT+TGG | + | chr4.2:30937021-30937040 | None:intergenic | 35.0% | |
CATTTAAAGGCTTGAGCTTT+AGG | + | chr4.2:30936109-30936128 | None:intergenic | 35.0% | |
CATTTCACTTCAGATAAGCA+AGG | - | chr4.2:30939494-30939513 | MS.gene071514:intron | 35.0% | |
CTCAATAGGATGTGATTGTT+AGG | - | chr4.2:30936587-30936606 | MS.gene071514:intron | 35.0% | |
CTGTTGACAAGTATCCATAT+CGG | + | chr4.2:30940227-30940246 | None:intergenic | 35.0% | |
GAAACGAATTGCGTATTTGT+TGG | - | chr4.2:30935643-30935662 | MS.gene071514:intron | 35.0% | |
GAAGAATCATTCTTTGTAGG+AGG | - | chr4.2:30938537-30938556 | MS.gene071514:CDS | 35.0% | |
GATATTTGTAATGACCTGGT+TGG | - | chr4.2:30939679-30939698 | MS.gene071514:intron | 35.0% | |
GATCAATCTGTGTAAATGAG+AGG | + | chr4.2:30939728-30939747 | None:intergenic | 35.0% | |
GGATTGCTATCATTACACTT+GGG | - | chr4.2:30938227-30938246 | MS.gene071514:intron | 35.0% | |
GTCAAAACTGAAAACCGTAT+TGG | - | chr4.2:30938342-30938361 | MS.gene071514:CDS | 35.0% | |
GTTATATGCCTTGATTAGTG+TGG | - | chr4.2:30940182-30940201 | MS.gene071514:CDS | 35.0% | |
GTTGTACTAATGCATGAATC+AGG | - | chr4.2:30938290-30938309 | MS.gene071514:intron | 35.0% | |
GTTTCAGAACATCAATCTCA+AGG | - | chr4.2:30939795-30939814 | MS.gene071514:intron | 35.0% | |
TAATCAAGCAGTAAAACCTC+AGG | + | chr4.2:30937657-30937676 | None:intergenic | 35.0% | |
TAGTGACAGTTTCAATTCCT+CGG | + | chr4.2:30936682-30936701 | None:intergenic | 35.0% | |
TCAATCTCAAGGAAATAGCA+AGG | - | chr4.2:30939806-30939825 | MS.gene071514:intron | 35.0% | |
TCCTGATTATAATCAGTCCA+TGG | - | chr4.2:30935598-30935617 | MS.gene071514:CDS | 35.0% | |
TGAGGGACATATACTAAAAG+TGG | + | chr4.2:30937810-30937829 | None:intergenic | 35.0% | |
TGGATTGCTATCATTACACT+TGG | - | chr4.2:30938226-30938245 | MS.gene071514:intron | 35.0% | |
TTCAACTCTTGAGAGTAACT+GGG | - | chr4.2:30938766-30938785 | MS.gene071514:CDS | 35.0% | |
TTCAGCTAAAACATACTGGT+AGG | - | chr4.2:30938968-30938987 | MS.gene071514:intron | 35.0% | |
TTCCCCTTTCAATTCAAAAC+TGG | - | chr4.2:30938608-30938627 | MS.gene071514:intron | 35.0% | |
TTTCCCATTTATGATATCCG+TGG | - | chr4.2:30939159-30939178 | MS.gene071514:intron | 35.0% | |
! | AAAGTGGCATACCTAAGTTT+TGG | + | chr4.2:30937794-30937813 | None:intergenic | 35.0% |
! | ATGCTTTTATTGCCCAAATC+AGG | - | chr4.2:30936974-30936993 | MS.gene071514:intron | 35.0% |
! | GATTGTAATTTGTAGGCTAC+TGG | - | chr4.2:30938257-30938276 | MS.gene071514:intron | 35.0% |
! | GCCTTTTCTATTACACCAAA+TGG | - | chr4.2:30937630-30937649 | MS.gene071514:CDS | 35.0% |
! | TAAAAACAGATCTAGAGCCT+AGG | + | chr4.2:30938563-30938582 | None:intergenic | 35.0% |
! | TAAGATATGCATTGACAAGG+CGG | - | chr4.2:30937607-30937626 | MS.gene071514:CDS | 35.0% |
! | TCCATGGACTGATTATAATC+AGG | + | chr4.2:30935602-30935621 | None:intergenic | 35.0% |
! | TCCTTTAGGAACCAAAACTT+AGG | - | chr4.2:30937780-30937799 | MS.gene071514:intron | 35.0% |
! | TGCTTTTATTGCCCAAATCA+GGG | - | chr4.2:30936975-30936994 | MS.gene071514:intron | 35.0% |
! | TTGGTGTTCATATCTTCTTG+TGG | - | chr4.2:30935777-30935796 | MS.gene071514:CDS | 35.0% |
!! | AATAGACGTTGTTGATGACT+TGG | + | chr4.2:30937681-30937700 | None:intergenic | 35.0% |
!! | ATAGACGTTGTTGATGACTT+GGG | + | chr4.2:30937680-30937699 | None:intergenic | 35.0% |
!! | ATTATCGGTGTCAATGTGTA+GGG | + | chr4.2:30935865-30935884 | None:intergenic | 35.0% |
!! | CCCATTTGGTGTAATAGAAA+AGG | + | chr4.2:30937634-30937653 | None:intergenic | 35.0% |
!! | GTAGAACTTGTTAACTGAGA+TGG | + | chr4.2:30939611-30939630 | None:intergenic | 35.0% |
!! | TATTATCGGTGTCAATGTGT+AGG | + | chr4.2:30935866-30935885 | None:intergenic | 35.0% |
!! | TGAATTGCTTTGTTTGACTC+AGG | + | chr4.2:30938145-30938164 | None:intergenic | 35.0% |
!! | TGTTTTGCTATGTCTGAGTT+GGG | - | chr4.2:30936537-30936556 | MS.gene071514:intron | 35.0% |
!! | TTGTTTTGCTATGTCTGAGT+TGG | - | chr4.2:30936536-30936555 | MS.gene071514:intron | 35.0% |
!!! | ACCTAAGTTTTGGTTCCTAA+AGG | + | chr4.2:30937784-30937803 | None:intergenic | 35.0% |
!!! | CATACAAGGCTACTTTTACA+TGG | - | chr4.2:30938179-30938198 | MS.gene071514:CDS | 35.0% |
!!! | TGATTGCTTTTTCTGAGAGT+TGG | - | chr4.2:30937283-30937302 | MS.gene071514:intron | 35.0% |
AACAACATATATGAGCCGCA+GGG | + | chr4.2:30937956-30937975 | None:intergenic | 40.0% | |
AACTTCCTCAACTCTTCTTG+TGG | + | chr4.2:30935707-30935726 | None:intergenic | 40.0% | |
AAGTCAATCGACAAAGTCCA+CGG | + | chr4.2:30939179-30939198 | None:intergenic | 40.0% | |
AATAAGGTAGAGAGAGAGAG+AGG | + | chr4.2:30935807-30935826 | None:intergenic | 40.0% | |
ACAAGAAGAGTTGAGGAAGT+TGG | - | chr4.2:30935706-30935725 | MS.gene071514:intron | 40.0% | |
ACATAAACGGAAGCAATCAG+GGG | - | chr4.2:30936947-30936966 | MS.gene071514:intron | 40.0% | |
ACGTGCATTCAACATTTGAG+GGG | - | chr4.2:30938385-30938404 | MS.gene071514:CDS | 40.0% | |
ACTTCCTCAACTCTTCTTGT+GGG | + | chr4.2:30935706-30935725 | None:intergenic | 40.0% | |
AGACACATCATATGTCTCCT+AGG | + | chr4.2:30938652-30938671 | None:intergenic | 40.0% | |
AGTAGGAGTTATGTGTGAAG+TGG | - | chr4.2:30938498-30938517 | MS.gene071514:intron | 40.0% | |
ATAAGGTAGAGAGAGAGAGA+GGG | + | chr4.2:30935806-30935825 | None:intergenic | 40.0% | |
ATATGCGTACTCTTCAGGTA+TGG | - | chr4.2:30938206-30938225 | MS.gene071514:intron | 40.0% | |
ATCCGCAATTGACAACACTA+TGG | - | chr4.2:30939448-30939467 | MS.gene071514:intron | 40.0% | |
ATGTCTCCTAGGCTTGAATT+TGG | + | chr4.2:30938641-30938660 | None:intergenic | 40.0% | |
ATTTAAGCATGTGGCAGCTT+TGG | + | chr4.2:30936046-30936065 | None:intergenic | 40.0% | |
CAACATAAACGGAAGCAATC+AGG | - | chr4.2:30936945-30936964 | MS.gene071514:intron | 40.0% | |
CAAGTATCCATATCGGAGAA+AGG | + | chr4.2:30940220-30940239 | None:intergenic | 40.0% | |
CAGAAAATGCTTCTGTAGTG+AGG | - | chr4.2:30940244-30940263 | MS.gene071514:CDS | 40.0% | |
CAGTTCTGTTTACATCTCCA+AGG | - | chr4.2:30937446-30937465 | MS.gene071514:CDS | 40.0% | |
CATCAAGAGCAGTGAATTTC+AGG | - | chr4.2:30939631-30939650 | MS.gene071514:intron | 40.0% | |
CATGGGAGTAATGTATGTGA+AGG | - | chr4.2:30936561-30936580 | MS.gene071514:intron | 40.0% | |
CATTGAATCCTCACAGCAAA+TGG | + | chr4.2:30937751-30937770 | None:intergenic | 40.0% | |
CTGAAATTCACTGCTCTTGA+TGG | + | chr4.2:30939633-30939652 | None:intergenic | 40.0% | |
CTTCACATACATTACTCCCA+TGG | + | chr4.2:30936563-30936582 | None:intergenic | 40.0% | |
GACATGCTATGTATTCTGCA+AGG | + | chr4.2:30939524-30939543 | None:intergenic | 40.0% | |
GACGTGCATTCAACATTTGA+GGG | - | chr4.2:30938384-30938403 | MS.gene071514:CDS | 40.0% | |
GACTAAGCATGACAAAGCAT+AGG | + | chr4.2:30938994-30939013 | None:intergenic | 40.0% | |
GCAATTGACAACACTATGGA+TGG | - | chr4.2:30939452-30939471 | MS.gene071514:intron | 40.0% | |
GCATAATATGCGTACTCTTC+AGG | - | chr4.2:30938201-30938220 | MS.gene071514:intron | 40.0% | |
GCATATCTGTAGAAGACGTA+AGG | + | chr4.2:30938073-30938092 | None:intergenic | 40.0% | |
GCATTAGTACAACCTTAGTG+AGG | + | chr4.2:30938283-30938302 | None:intergenic | 40.0% | |
GCTGAATGTGGTCACAAAAT+TGG | - | chr4.2:30937033-30937052 | MS.gene071514:intron | 40.0% | |
GTTAAGTGAAGGCCAAAAGT+AGG | + | chr4.2:30938841-30938860 | None:intergenic | 40.0% | |
TAACAACATATATGAGCCGC+AGG | + | chr4.2:30937957-30937976 | None:intergenic | 40.0% | |
TCAACTCTTGAGAGTAACTG+GGG | - | chr4.2:30938767-30938786 | MS.gene071514:CDS | 40.0% | |
TCCATCTGAATCCCTGATTT+GGG | + | chr4.2:30936989-30937008 | None:intergenic | 40.0% | |
TGACGTGCATTCAACATTTG+AGG | - | chr4.2:30938383-30938402 | MS.gene071514:CDS | 40.0% | |
TGCGGCTCATATATGTTGTT+AGG | - | chr4.2:30937956-30937975 | MS.gene071514:intron | 40.0% | |
TGTGACCACATTCAGCTATT+CGG | + | chr4.2:30937029-30937048 | None:intergenic | 40.0% | |
TTCCATCTGAATCCCTGATT+TGG | + | chr4.2:30936990-30937009 | None:intergenic | 40.0% | |
TTGCGGATCGCATAAAATAG+CGG | + | chr4.2:30939436-30939455 | None:intergenic | 40.0% | |
TTTCTGCCAAATTCAAGCCT+AGG | - | chr4.2:30938632-30938651 | MS.gene071514:intron | 40.0% | |
! | AAGATATGCATTGACAAGGC+GGG | - | chr4.2:30937608-30937627 | MS.gene071514:CDS | 40.0% |
! | ATTGCGTATTTGTTGGATCG+TGG | - | chr4.2:30935650-30935669 | MS.gene071514:intron | 40.0% |
! | CTCTGGAGAACCATGATTAA+AGG | + | chr4.2:30939132-30939151 | None:intergenic | 40.0% |
! | GCTACTTCGTTTGAGTTTGT+TGG | - | chr4.2:30938807-30938826 | MS.gene071514:CDS | 40.0% |
! | TTGGCTCTTCATGAGGTTAT+TGG | - | chr4.2:30935725-30935744 | MS.gene071514:intron | 40.0% |
!! | CATTCTCTTGCTGTTAAGCT+TGG | - | chr4.2:30935758-30935777 | MS.gene071514:intron | 40.0% |
!! | TCAGCTCAGAAGTATTGGAT+CGG | - | chr4.2:30936749-30936768 | MS.gene071514:intron | 40.0% |
!! | TGATTAATGGATTTCAGGGG+CGG | - | chr4.2:30936438-30936457 | MS.gene071514:intron | 40.0% |
AACAACCAAGCCACTAAGTG+GGG | + | chr4.2:30936010-30936029 | None:intergenic | 45.0% | |
ACAACAACCAAGCCACTAAG+TGG | + | chr4.2:30936012-30936031 | None:intergenic | 45.0% | |
AGTAAAACCTCAGGCCCATT+TGG | + | chr4.2:30937648-30937667 | None:intergenic | 45.0% | |
AGTCTGCCTTCATTCTAGTG+AGG | - | chr4.2:30939829-30939848 | MS.gene071514:intron | 45.0% | |
ATCAGTCCATGGAACAACAG+AGG | - | chr4.2:30935609-30935628 | MS.gene071514:CDS | 45.0% | |
CAAAATAAACACCTGCCCTG+CGG | - | chr4.2:30937938-30937957 | MS.gene071514:intron | 45.0% | |
CAACAACCAAGCCACTAAGT+GGG | + | chr4.2:30936011-30936030 | None:intergenic | 45.0% | |
CAACAATGTTCTGATGCAGC+AGG | - | chr4.2:30938410-30938429 | MS.gene071514:intron | 45.0% | |
CATAAACGGAAGCAATCAGG+GGG | - | chr4.2:30936948-30936967 | MS.gene071514:intron | 45.0% | |
CGAAGTTCAGCACATAGCTT+TGG | + | chr4.2:30940279-30940298 | None:intergenic | 45.0% | |
CGTGCATTCAACATTTGAGG+GGG | - | chr4.2:30938386-30938405 | MS.gene071514:CDS | 45.0% | |
CTAAGAATGCTGCAAACCTC+TGG | + | chr4.2:30937392-30937411 | None:intergenic | 45.0% | |
GATAGAAGCTTCTACCAACC+AGG | + | chr4.2:30939696-30939715 | None:intergenic | 45.0% | |
GCACTCAAGTATTCACCACT+TGG | + | chr4.2:30937244-30937263 | None:intergenic | 45.0% | |
GTATGTGAAGGCTGCTCAAT+AGG | - | chr4.2:30936573-30936592 | MS.gene071514:intron | 45.0% | |
GTCTTCGTCCACACTAATCA+AGG | + | chr4.2:30940193-30940212 | None:intergenic | 45.0% | |
GTTAACTGAGATGGGATGAC+AGG | + | chr4.2:30939602-30939621 | None:intergenic | 45.0% | |
TAAGGTAGAGAGAGAGAGAG+GGG | + | chr4.2:30935805-30935824 | None:intergenic | 45.0% | |
TAGCTCTCAACCACTTGTCA+TGG | + | chr4.2:30936494-30936513 | None:intergenic | 45.0% | |
TAGGGTCCTCACTAGAATGA+AGG | + | chr4.2:30939838-30939857 | None:intergenic | 45.0% | |
TATTACACCAAATGGGCCTG+AGG | - | chr4.2:30937638-30937657 | MS.gene071514:CDS | 45.0% | |
TCAATAGGTCTCGCTCTCTT+AGG | + | chr4.2:30939758-30939777 | None:intergenic | 45.0% | |
TCAGTCCATGGAACAACAGA+GGG | - | chr4.2:30935610-30935629 | MS.gene071514:CDS | 45.0% | |
TCATTCTTTGTAGGAGGCCT+AGG | - | chr4.2:30938543-30938562 | MS.gene071514:CDS | 45.0% | |
TGCAATAGTTACACGACCAG+AGG | + | chr4.2:30937424-30937443 | None:intergenic | 45.0% | |
TTACACGACCAGAGGTCAAA+GGG | + | chr4.2:30937416-30937435 | None:intergenic | 45.0% | |
TTGTCATGCTTAGTCGCGAA+AGG | - | chr4.2:30938999-30939018 | MS.gene071514:intron | 45.0% | |
TTTACCTTCAATGAACCGGC+TGG | + | chr4.2:30940013-30940032 | None:intergenic | 45.0% | |
! | GAGTAAACTCAAGTTCTGGC+TGG | - | chr4.2:30937146-30937165 | MS.gene071514:intron | 45.0% |
! | GTGAGTCAGCTCAGAAGTAT+TGG | - | chr4.2:30936744-30936763 | MS.gene071514:intron | 45.0% |
! | TACTTCTGAGCTGACTCACA+CGG | + | chr4.2:30936743-30936762 | None:intergenic | 45.0% |
! | TGGATCGTGGTGTTTTTCGT+GGG | - | chr4.2:30935663-30935682 | MS.gene071514:intron | 45.0% |
! | TTCACCACTTGGTGAAACGT+CGG | + | chr4.2:30937233-30937252 | None:intergenic | 45.0% |
! | TTGCATTTTGTCTCCTCTGC+AGG | - | chr4.2:30940137-30940156 | MS.gene071514:CDS | 45.0% |
! | TTGGATCGTGGTGTTTTTCG+TGG | - | chr4.2:30935662-30935681 | MS.gene071514:intron | 45.0% |
! | TTTACCAGCCGGTTCATTGA+AGG | - | chr4.2:30940006-30940025 | MS.gene071514:CDS | 45.0% |
!! | ACTTAGTGGCTTGGTTGTTG+TGG | - | chr4.2:30936011-30936030 | MS.gene071514:CDS | 45.0% |
!! | ATTAATGGATTTCAGGGGCG+GGG | - | chr4.2:30936440-30936459 | MS.gene071514:intron | 45.0% |
!! | GAGTTGATAATGGCCGTATC+TGG | - | chr4.2:30937064-30937083 | MS.gene071514:intron | 45.0% |
!! | GATTAATGGATTTCAGGGGC+GGG | - | chr4.2:30936439-30936458 | MS.gene071514:intron | 45.0% |
!! | TACAGAGCGGACTATTCAAC+CGG | - | chr4.2:30935546-30935565 | MS.gene071514:CDS | 45.0% |
!! | TATCAGCTTGCTGAGGACTT+GGG | - | chr4.2:30939929-30939948 | MS.gene071514:intron | 45.0% |
!! | TTATCAGCTTGCTGAGGACT+TGG | - | chr4.2:30939928-30939947 | MS.gene071514:intron | 45.0% |
!! | TTCGGGTTGATGATACAGAG+CGG | - | chr4.2:30935533-30935552 | MS.gene071514:CDS | 45.0% |
ACAATCTGGAAGATCGCGAC+TGG | - | chr4.2:30935507-30935526 | MS.gene071514:CDS | 50.0% | |
AGACCTAAGACATCCTGCAG+AGG | + | chr4.2:30940153-30940172 | None:intergenic | 50.0% | |
ATAGGTCTCGCTCTCTTAGG+TGG | + | chr4.2:30939755-30939774 | None:intergenic | 50.0% | |
ATGGCCCACAAGAAGAGTTG+AGG | - | chr4.2:30935699-30935718 | MS.gene071514:intron | 50.0% | |
CATCTCCCTCTGTTGTTCCA+TGG | + | chr4.2:30935618-30935637 | None:intergenic | 50.0% | |
CCTCAGCAAGCTGATAACTC+TGG | + | chr4.2:30939925-30939944 | None:intergenic | 50.0% | |
GCCCAAATCAGGGATTCAGA+TGG | - | chr4.2:30936985-30937004 | MS.gene071514:intron | 50.0% | |
GTATGTCTTCTGTGCTCCAG+AGG | - | chr4.2:30937373-30937392 | MS.gene071514:CDS | 50.0% | |
GTTACACGACCAGAGGTCAA+AGG | + | chr4.2:30937417-30937436 | None:intergenic | 50.0% | |
TACACGACCAGAGGTCAAAG+GGG | + | chr4.2:30937415-30937434 | None:intergenic | 50.0% | |
TCGGTGGTGCAGCAAATGTA+AGG | - | chr4.2:30936768-30936787 | MS.gene071514:intron | 50.0% | |
TCTCCTCTGCAGGATGTCTT+AGG | - | chr4.2:30940147-30940166 | MS.gene071514:CDS | 50.0% | |
TTCTTAGCCCCTTTGACCTC+TGG | - | chr4.2:30937405-30937424 | MS.gene071514:CDS | 50.0% | |
! | AAGATCGCGACTGGCTATTC+GGG | - | chr4.2:30935516-30935535 | MS.gene071514:CDS | 50.0% |
! | ATCGTGGTGTTTTTCGTGGG+TGG | - | chr4.2:30935666-30935685 | MS.gene071514:intron | 50.0% |
! | CTATGTCTGAGTTGGGCCAT+GGG | - | chr4.2:30936544-30936563 | MS.gene071514:intron | 50.0% |
! | GAAGATCGCGACTGGCTATT+CGG | - | chr4.2:30935515-30935534 | MS.gene071514:CDS | 50.0% |
! | GAGGAAGTTGGCTCTTCATG+AGG | - | chr4.2:30935718-30935737 | MS.gene071514:intron | 50.0% |
! | GAGTGATTTTCACAGGTCCG+AGG | - | chr4.2:30936662-30936681 | MS.gene071514:intron | 50.0% |
! | GTAGCAGGTTCTGATGCAGT+AGG | - | chr4.2:30938481-30938500 | MS.gene071514:intron | 50.0% |
! | GTTTTTCGTGGGTGGCTTAC+TGG | - | chr4.2:30935674-30935693 | MS.gene071514:intron | 50.0% |
! | TAAGCATGTGGCAGCTTTGG+TGG | + | chr4.2:30936043-30936062 | None:intergenic | 50.0% |
!! | ACTAAGTGGGGTTGGCTACA+CGG | + | chr4.2:30935998-30936017 | None:intergenic | 50.0% |
!! | CCAGAGTTATCAGCTTGCTG+AGG | - | chr4.2:30939922-30939941 | MS.gene071514:intron | 50.0% |
!! | GCTCAGAAGTATTGGATCGG+TGG | - | chr4.2:30936752-30936771 | MS.gene071514:intron | 50.0% |
ACATATATGAGCCGCAGGGC+AGG | + | chr4.2:30937952-30937971 | None:intergenic | 55.0% | |
ACCAAGCCACTAAGTGGGGT+TGG | + | chr4.2:30936006-30936025 | None:intergenic | 55.0% | |
CAGGAATGCCGTGAAGCATG+TGG | - | chr4.2:30938309-30938328 | MS.gene071514:intron | 55.0% | |
CCAAGCGTCACCATGACAAG+TGG | - | chr4.2:30936481-30936500 | MS.gene071514:intron | 55.0% | |
CCTGTCCTCCACATGCTTCA+CGG | + | chr4.2:30938320-30938339 | None:intergenic | 55.0% | |
CGTGAAGCATGTGGAGGACA+GGG | - | chr4.2:30938318-30938337 | MS.gene071514:intron | 55.0% | |
CTGGCTGGACATCTGACTTC+AGG | - | chr4.2:30937161-30937180 | MS.gene071514:intron | 55.0% | |
GAATGCCGTGAAGCATGTGG+AGG | - | chr4.2:30938312-30938331 | MS.gene071514:intron | 55.0% | |
GACGCTGCCTTTCTCCGATA+TGG | - | chr4.2:30940210-30940229 | MS.gene071514:CDS | 55.0% | |
GCTCTTGGACGGTCACAATC+TGG | - | chr4.2:30935493-30935512 | MS.gene071514:CDS | 55.0% | |
GCTGAGTCAGCTTTACCAGC+CGG | - | chr4.2:30939995-30940014 | MS.gene071514:intron | 55.0% | |
GCTGTAGCACTGTTGCGTAG+TGG | - | chr4.2:30939398-30939417 | MS.gene071514:intron | 55.0% | |
GGCGGGGCTGTTAAGTTTCT+GGG | - | chr4.2:30936456-30936475 | MS.gene071514:intron | 55.0% | |
GTGTAGCCAACCCCACTTAG+TGG | - | chr4.2:30935997-30936016 | MS.gene071514:CDS | 55.0% | |
! | ACTTGGTGAAACGTCGGCCA+CGG | + | chr4.2:30937227-30937246 | None:intergenic | 55.0% |
! | CCACTTGTCATGGTGACGCT+TGG | + | chr4.2:30936484-30936503 | None:intergenic | 55.0% |
! | GCTATGTCTGAGTTGGGCCA+TGG | - | chr4.2:30936543-30936562 | MS.gene071514:intron | 55.0% |
! | GTAGGCTACTGGCCTCACTA+AGG | - | chr4.2:30938268-30938287 | MS.gene071514:intron | 55.0% |
!! | AGAGCGGACTATTCAACCGG+CGG | - | chr4.2:30935549-30935568 | MS.gene071514:CDS | 55.0% |
CACACGTGCGTGCACTGAGA+AGG | + | chr4.2:30940060-30940079 | None:intergenic | 60.0% | |
CCGTGAAGCATGTGGAGGAC+AGG | - | chr4.2:30938317-30938336 | MS.gene071514:intron | 60.0% | |
CGTGGGTGGCTTACTGGTGA+TGG | - | chr4.2:30935680-30935699 | MS.gene071514:intron | 60.0% | |
GACCGCATGCACTTGCCTTG+TGG | - | chr4.2:30940298-30940317 | MS.gene071514:CDS | 60.0% | |
GCCAACCCCACTTAGTGGCT+TGG | - | chr4.2:30936002-30936021 | MS.gene071514:CDS | 60.0% | |
GGGCGGGGCTGTTAAGTTTC+TGG | - | chr4.2:30936455-30936474 | MS.gene071514:intron | 60.0% | |
GTGGCCGACGTTTCACCAAG+TGG | - | chr4.2:30937226-30937245 | MS.gene071514:intron | 60.0% | |
TTCAACCGGCGGGAAGTCGA+CGG | - | chr4.2:30935560-30935579 | MS.gene071514:CDS | 60.0% | |
!! | GAGCGGACTATTCAACCGGC+GGG | - | chr4.2:30935550-30935569 | MS.gene071514:CDS | 60.0% |
ACCGGCGGGAAGTCGACGGC+AGG | - | chr4.2:30935564-30935583 | MS.gene071514:CDS | 75.0% | |
CCGGCGGGAAGTCGACGGCA+GGG | - | chr4.2:30935565-30935584 | MS.gene071514:CDS | 75.0% | |
!! | CCCTGCCGTCGACTTCCCGC+CGG | + | chr4.2:30935568-30935587 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 30935485 | 30940317 | 30935485 | ID=MS.gene071514 |
chr4.2 | mRNA | 30935485 | 30940317 | 30935485 | ID=MS.gene071514.t1;Parent=MS.gene071514 |
chr4.2 | exon | 30940004 | 30940317 | 30940004 | ID=MS.gene071514.t1.exon1;Parent=MS.gene071514.t1 |
chr4.2 | CDS | 30940004 | 30940317 | 30940004 | ID=cds.MS.gene071514.t1;Parent=MS.gene071514.t1 |
chr4.2 | exon | 30939230 | 30939347 | 30939230 | ID=MS.gene071514.t1.exon2;Parent=MS.gene071514.t1 |
chr4.2 | CDS | 30939230 | 30939347 | 30939230 | ID=cds.MS.gene071514.t1;Parent=MS.gene071514.t1 |
chr4.2 | exon | 30939018 | 30939125 | 30939018 | ID=MS.gene071514.t1.exon3;Parent=MS.gene071514.t1 |
chr4.2 | CDS | 30939018 | 30939125 | 30939018 | ID=cds.MS.gene071514.t1;Parent=MS.gene071514.t1 |
chr4.2 | exon | 30938717 | 30938889 | 30938717 | ID=MS.gene071514.t1.exon4;Parent=MS.gene071514.t1 |
chr4.2 | CDS | 30938717 | 30938889 | 30938717 | ID=cds.MS.gene071514.t1;Parent=MS.gene071514.t1 |
chr4.2 | exon | 30938521 | 30938619 | 30938521 | ID=MS.gene071514.t1.exon5;Parent=MS.gene071514.t1 |
chr4.2 | CDS | 30938521 | 30938619 | 30938521 | ID=cds.MS.gene071514.t1;Parent=MS.gene071514.t1 |
chr4.2 | exon | 30938335 | 30938407 | 30938335 | ID=MS.gene071514.t1.exon6;Parent=MS.gene071514.t1 |
chr4.2 | CDS | 30938335 | 30938407 | 30938335 | ID=cds.MS.gene071514.t1;Parent=MS.gene071514.t1 |
chr4.2 | exon | 30938084 | 30938214 | 30938084 | ID=MS.gene071514.t1.exon7;Parent=MS.gene071514.t1 |
chr4.2 | CDS | 30938084 | 30938214 | 30938084 | ID=cds.MS.gene071514.t1;Parent=MS.gene071514.t1 |
chr4.2 | exon | 30937580 | 30937715 | 30937580 | ID=MS.gene071514.t1.exon8;Parent=MS.gene071514.t1 |
chr4.2 | CDS | 30937580 | 30937715 | 30937580 | ID=cds.MS.gene071514.t1;Parent=MS.gene071514.t1 |
chr4.2 | exon | 30937371 | 30937490 | 30937371 | ID=MS.gene071514.t1.exon9;Parent=MS.gene071514.t1 |
chr4.2 | CDS | 30937371 | 30937490 | 30937371 | ID=cds.MS.gene071514.t1;Parent=MS.gene071514.t1 |
chr4.2 | exon | 30936150 | 30936290 | 30936150 | ID=MS.gene071514.t1.exon10;Parent=MS.gene071514.t1 |
chr4.2 | CDS | 30936150 | 30936290 | 30936150 | ID=cds.MS.gene071514.t1;Parent=MS.gene071514.t1 |
chr4.2 | exon | 30935957 | 30936061 | 30935957 | ID=MS.gene071514.t1.exon11;Parent=MS.gene071514.t1 |
chr4.2 | CDS | 30935957 | 30936061 | 30935957 | ID=cds.MS.gene071514.t1;Parent=MS.gene071514.t1 |
chr4.2 | exon | 30935775 | 30935876 | 30935775 | ID=MS.gene071514.t1.exon12;Parent=MS.gene071514.t1 |
chr4.2 | CDS | 30935775 | 30935876 | 30935775 | ID=cds.MS.gene071514.t1;Parent=MS.gene071514.t1 |
chr4.2 | exon | 30935485 | 30935643 | 30935485 | ID=MS.gene071514.t1.exon13;Parent=MS.gene071514.t1 |
chr4.2 | CDS | 30935485 | 30935643 | 30935485 | ID=cds.MS.gene071514.t1;Parent=MS.gene071514.t1 |
Gene Sequence |
Protein sequence |