Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21220.t1 | XP_003611339.1 | 99.1 | 664 | 6 | 0 | 1 | 664 | 1 | 664 | 0.00E+00 | 1328.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21220.t1 | O65202 | 79.5 | 664 | 136 | 0 | 1 | 664 | 1 | 664 | 0.0e+00 | 1095.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21220.t1 | G7JXE0 | 99.1 | 664 | 6 | 0 | 1 | 664 | 1 | 664 | 0.0e+00 | 1328.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene21220 | MS.gene94677 | PPI |
| MS.gene21220 | MS.gene045538 | PPI |
| MS.gene95617 | MS.gene21220 | PPI |
| MS.gene071514 | MS.gene21220 | PPI |
| MS.gene21220 | MS.gene68895 | PPI |
| MS.gene21220 | MS.gene57427 | PPI |
| MS.gene071513 | MS.gene21220 | PPI |
| MS.gene004536 | MS.gene21220 | PPI |
| MS.gene21220 | MS.gene030781 | PPI |
| MS.gene21220 | MS.gene52387 | PPI |
| MS.gene031651 | MS.gene21220 | PPI |
| MS.gene21220 | MS.gene006655 | PPI |
| MS.gene045541 | MS.gene21220 | PPI |
| MS.gene045536 | MS.gene21220 | PPI |
| MS.gene21220 | MS.gene84175 | PPI |
| MS.gene73859 | MS.gene21220 | PPI |
| MS.gene21220 | MS.gene00278 | PPI |
| MS.gene28100 | MS.gene21220 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21220.t1 | MTR_5g012920 | 99.096 | 664 | 6 | 0 | 1 | 664 | 1 | 664 | 0.0 | 1376 |
| MS.gene21220.t1 | MTR_4g100640 | 86.446 | 664 | 90 | 0 | 1 | 664 | 1 | 664 | 0.0 | 1225 |
| MS.gene21220.t1 | MTR_4g100640 | 86.330 | 534 | 73 | 0 | 1 | 534 | 1 | 534 | 0.0 | 986 |
| MS.gene21220.t1 | MTR_8g090375 | 35.436 | 539 | 319 | 11 | 103 | 623 | 150 | 677 | 1.12e-87 | 288 |
| MS.gene21220.t1 | MTR_4g079290 | 31.111 | 540 | 313 | 15 | 103 | 617 | 158 | 663 | 1.27e-72 | 248 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21220.t1 | AT4G16760 | 79.518 | 664 | 136 | 0 | 1 | 664 | 1 | 664 | 0.0 | 1130 |
| MS.gene21220.t1 | AT2G35690 | 77.711 | 664 | 148 | 0 | 1 | 664 | 1 | 664 | 0.0 | 1113 |
| MS.gene21220.t1 | AT4G16760 | 77.861 | 664 | 134 | 1 | 1 | 664 | 1 | 651 | 0.0 | 1096 |
| MS.gene21220.t1 | AT5G65110 | 36.347 | 531 | 305 | 12 | 103 | 613 | 154 | 671 | 2.79e-90 | 295 |
| MS.gene21220.t1 | AT5G65110 | 37.014 | 489 | 275 | 12 | 103 | 571 | 154 | 629 | 7.51e-85 | 280 |
| MS.gene21220.t1 | AT1G06290 | 31.963 | 535 | 322 | 10 | 101 | 617 | 152 | 662 | 1.77e-75 | 255 |
| MS.gene21220.t1 | AT1G06310 | 31.028 | 535 | 327 | 10 | 101 | 617 | 152 | 662 | 3.26e-68 | 236 |
Find 155 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTTGCTTGGTTCGGTTCT+TGG | 0.094440 | 5.1:-6049325 | MS.gene21220:CDS |
| GTTCCAAGACAGTTAATTTA+TGG | 0.112379 | 5.1:-6052417 | MS.gene21220:CDS |
| TTAAAACTTACCTGTGTTTC+AGG | 0.163285 | 5.1:+6052273 | None:intergenic |
| TGTTGGTACCACAGCTTATT+TGG | 0.170114 | 5.1:-6050691 | MS.gene21220:CDS |
| CTAAATCAACCGAGAGTTCT+TGG | 0.251170 | 5.1:+6050045 | None:intergenic |
| ATCAAATTATTTACCCTCTT+CGG | 0.260897 | 5.1:+6050408 | None:intergenic |
| GATGATCACTTGCCTCTTCC+AGG | 0.262013 | 5.1:-6053261 | MS.gene21220:CDS |
| ATTTCTTCTTCATAAGCATC+TGG | 0.272492 | 5.1:-6049567 | MS.gene21220:CDS |
| CTCATTAACATTTGATTCCT+TGG | 0.274627 | 5.1:+6053147 | None:intergenic |
| TGCTGTTTCACTCCCTTTCC+AGG | 0.289616 | 5.1:+6049620 | None:intergenic |
| ATCATCGAGCTCCGTCTTAA+TGG | 0.296925 | 5.1:-6054151 | MS.gene21220:intron |
| TCAAATTATTTACCCTCTTC+GGG | 0.297573 | 5.1:+6050409 | None:intergenic |
| GGAGATATAGGAATGAAATT+TGG | 0.298590 | 5.1:-6053228 | MS.gene21220:CDS |
| ACTTGGAAACAACGATTAAC+TGG | 0.319990 | 5.1:+6050000 | None:intergenic |
| ACCCATTTCACTCACTTTGC+TGG | 0.325162 | 5.1:+6053655 | None:intergenic |
| GCTTATAAGATGCAAATAAT+TGG | 0.328087 | 5.1:-6053791 | MS.gene21220:CDS |
| CATGACCGCCACATAGTTTA+CGG | 0.337459 | 5.1:+6051086 | None:intergenic |
| GGTATAACTGTTGGAGATAT+AGG | 0.352506 | 5.1:-6053240 | MS.gene21220:CDS |
| TCCATGACCAAGTTCGGTTT+GGG | 0.356785 | 5.1:+6053760 | None:intergenic |
| GAGGCCCATGCTTGCACTGC+AGG | 0.358135 | 5.1:-6051737 | MS.gene21220:CDS |
| CAGTGGTGGCCTGGTGGGTT+GGG | 0.360168 | 5.1:-6053457 | MS.gene21220:CDS |
| TTTGAACGATTCAGTTGTTC+CGG | 0.365321 | 5.1:-6049248 | MS.gene21220:CDS |
| TGCAGTGCAAGCATGGGCCT+CGG | 0.367016 | 5.1:+6051739 | None:intergenic |
| GCGAGGTTCTGTTATCCTTT+CGG | 0.370477 | 5.1:+6054233 | None:intergenic |
| CACTGATCACTTGCTTGGTT+CGG | 0.370586 | 5.1:-6049332 | MS.gene21220:CDS |
| TGAACGAGATGAAGATCGTT+TGG | 0.375997 | 5.1:-6055742 | MS.gene21220:CDS |
| GCATATAACACCATGGATAA+TGG | 0.377132 | 5.1:-6053198 | MS.gene21220:CDS |
| ACAGTTAATTTATGGAACTA+TGG | 0.379880 | 5.1:-6052409 | MS.gene21220:CDS |
| ATCCATGACCAAGTTCGGTT+TGG | 0.380441 | 5.1:+6053759 | None:intergenic |
| AATGCTTCAATCACTACATT+AGG | 0.385321 | 5.1:+6050493 | None:intergenic |
| TCTTCGAACAGCACTGTATC+TGG | 0.395533 | 5.1:+6052320 | None:intergenic |
| CATTGTCCAGCTGCGGAGCT+TGG | 0.402282 | 5.1:-6053283 | MS.gene21220:CDS |
| AGTGCTGTTCGAAGACAGTT+TGG | 0.407994 | 5.1:-6052312 | MS.gene21220:CDS |
| TCGTCTTGTTGCTTCCGATC+CGG | 0.408981 | 5.1:-6055678 | MS.gene21220:intron |
| GTTCCATAAATTAACTGTCT+TGG | 0.409125 | 5.1:+6052414 | None:intergenic |
| ACTATTTCTCAGTTGGGCTC+TGG | 0.412349 | 5.1:-6050723 | MS.gene21220:CDS |
| CAAGCCTCTTCATACAACTT+AGG | 0.414324 | 5.1:+6049280 | None:intergenic |
| AAGACAGTTTGGATCTCAAA+AGG | 0.417258 | 5.1:-6052301 | MS.gene21220:CDS |
| ATTGGATCCATGACCAAGTT+CGG | 0.420690 | 5.1:+6053754 | None:intergenic |
| TGTGAAAACTATTTCTCAGT+TGG | 0.420771 | 5.1:-6050730 | MS.gene21220:CDS |
| CTCTTCGGGATTAGAGAACT+TGG | 0.422146 | 5.1:+6050423 | None:intergenic |
| GGCAGTTACCATGCACTCCT+TGG | 0.423545 | 5.1:+6053380 | None:intergenic |
| TGCTATGCCCAAACCGAACT+TGG | 0.425668 | 5.1:-6053767 | MS.gene21220:CDS |
| CAGAACCTCGCTTGATAGAA+AGG | 0.431419 | 5.1:-6054221 | MS.gene21220:CDS |
| GTGAAAACTATTTCTCAGTT+GGG | 0.433134 | 5.1:-6050729 | MS.gene21220:CDS |
| AATTAACTGTCTTGGAACAT+TGG | 0.434172 | 5.1:+6052422 | None:intergenic |
| TATTTCTTTCAGCTGAGGAT+TGG | 0.436315 | 5.1:-6050522 | MS.gene21220:intron |
| ACAGTGGTGGCCTGGTGGGT+TGG | 0.444941 | 5.1:-6053458 | MS.gene21220:intron |
| TCGGTTCTTGGACGATATGA+TGG | 0.447801 | 5.1:-6049313 | MS.gene21220:CDS |
| TGTTTCTAGCCCTTGAACAT+TGG | 0.451242 | 5.1:+6053736 | None:intergenic |
| AAATAAGCTGTGGTACCAAC+AGG | 0.453734 | 5.1:+6050693 | None:intergenic |
| GGTCATGGATCCAATGTTCA+AGG | 0.456359 | 5.1:-6053746 | MS.gene21220:CDS |
| TGATTGAAGCATTTGAAGCT+AGG | 0.457796 | 5.1:-6050483 | MS.gene21220:CDS |
| AACTACACTGATCACTTGCT+TGG | 0.458268 | 5.1:-6049337 | MS.gene21220:CDS |
| TCAACAAGCGAAATTGCATT+AGG | 0.463482 | 5.1:+6049367 | None:intergenic |
| GTTCCTTGTCCTTTGATAGC+AGG | 0.464054 | 5.1:+6053845 | None:intergenic |
| TTGTTAGTGAGTGGCTGAAA+TGG | 0.464666 | 5.1:-6051814 | MS.gene21220:CDS |
| GCAGTGCAAGCATGGGCCTC+GGG | 0.469610 | 5.1:+6051740 | None:intergenic |
| TCAACCCTGCAGTGCAAGCA+TGG | 0.475719 | 5.1:+6051732 | None:intergenic |
| CATTTGAAGCTAGGGCTGCC+AGG | 0.476260 | 5.1:-6050474 | MS.gene21220:CDS |
| AGCAACAGCGACAGACATCC+TGG | 0.480899 | 5.1:+6050456 | None:intergenic |
| GATCATCCAAGCTCCGCAGC+TGG | 0.484060 | 5.1:+6053277 | None:intergenic |
| AAACAGCTTATGCATGGAAA+AGG | 0.484075 | 5.1:-6054174 | MS.gene21220:CDS |
| CTAAGTTGTATGAAGAGGCT+TGG | 0.484852 | 5.1:-6049279 | MS.gene21220:CDS |
| TCAATCTACCAGGGTTTCAC+AGG | 0.486685 | 5.1:-6052472 | MS.gene21220:intron |
| CACTTTGCTGGAAGTCAATG+TGG | 0.488729 | 5.1:+6053667 | None:intergenic |
| AAAGGGAGGGCCTGAAACAC+AGG | 0.490637 | 5.1:-6052283 | MS.gene21220:intron |
| CCTCTTCCAGGTATAACTGT+TGG | 0.492065 | 5.1:-6053249 | MS.gene21220:CDS |
| AAGTTGCAGCAGGATATTCC+TGG | 0.494448 | 5.1:-6049638 | MS.gene21220:CDS |
| TATCAATCTGATGTTAAAAG+AGG | 0.499454 | 5.1:-6050645 | MS.gene21220:intron |
| GATTTAAAACAGTGGTGGCC+TGG | 0.499837 | 5.1:-6053466 | MS.gene21220:intron |
| CGTAAACTATGTGGCGGTCA+TGG | 0.500557 | 5.1:-6051085 | MS.gene21220:CDS |
| AACTATGGTATATGTGAGGC+AGG | 0.503575 | 5.1:-6052394 | MS.gene21220:CDS |
| ATTGAGGTCCTTGTATTCAC+AGG | 0.503670 | 5.1:-6049486 | MS.gene21220:intron |
| AACGATTCAGTTGTTCCGGA+TGG | 0.504657 | 5.1:-6049244 | MS.gene21220:CDS |
| ATTTATAGAGAAGTTGCAGC+AGG | 0.515002 | 5.1:-6049648 | MS.gene21220:CDS |
| GTTAGGTTTCCAAGAACTCT+CGG | 0.516022 | 5.1:-6050054 | MS.gene21220:intron |
| ATTGTCTCCTTCATATGTGC+AGG | 0.516882 | 5.1:+6051012 | None:intergenic |
| TATGCCCGTCTTATTACTGA+AGG | 0.517912 | 5.1:-6053409 | MS.gene21220:CDS |
| TGATCCTTGTTCTTCAGTGA+TGG | 0.520893 | 5.1:+6049523 | None:intergenic |
| ACAAGGAACTGATGAGCAGC+AGG | 0.521441 | 5.1:-6053831 | MS.gene21220:CDS |
| AGTATGTTCAACCAATGCTT+AGG | 0.523519 | 5.1:-6049213 | MS.gene21220:CDS |
| GATTGAAGCATTTGAAGCTA+GGG | 0.524983 | 5.1:-6050482 | MS.gene21220:CDS |
| TTTCTTCTTCATAAGCATCT+GGG | 0.526463 | 5.1:-6049566 | MS.gene21220:CDS |
| CAAGGAATCAAATGTTAATG+AGG | 0.527574 | 5.1:-6053146 | MS.gene21220:intron |
| GTTCCTGCCTGCACATATGA+AGG | 0.531498 | 5.1:-6051019 | MS.gene21220:CDS |
| AGGACAAACCTGTGAATACA+AGG | 0.532597 | 5.1:+6049478 | None:intergenic |
| ACATACTCTTTAAAGCCATC+CGG | 0.534417 | 5.1:+6049229 | None:intergenic |
| CACAGCTTATTTGGCTCGAG+TGG | 0.536143 | 5.1:-6050682 | MS.gene21220:CDS |
| CAGCAGGATATTCCTGGAAA+GGG | 0.543175 | 5.1:-6049632 | MS.gene21220:CDS |
| AGGCCCATGCTTGCACTGCA+GGG | 0.545482 | 5.1:-6051736 | MS.gene21220:CDS |
| GCCCAAACCGAACTTGGTCA+TGG | 0.547592 | 5.1:-6053761 | MS.gene21220:CDS |
| TAAATGATCAACGCCTTCCA+TGG | 0.548344 | 5.1:+6055796 | None:intergenic |
| CTGATGAGCAGCAGGAAAAG+TGG | 0.548829 | 5.1:-6053823 | MS.gene21220:CDS |
| TTGATCATTTAGCTTTCGAA+AGG | 0.549068 | 5.1:-6055784 | MS.gene21220:CDS |
| ACTTTGCTGGAAGTCAATGT+GGG | 0.549139 | 5.1:+6053668 | None:intergenic |
| CATATGCAGAAGCTAGCAAT+GGG | 0.550323 | 5.1:+6051846 | None:intergenic |
| CATTCTCATCCAACCATGGA+AGG | 0.553925 | 5.1:-6055809 | None:intergenic |
| TTCTTCAGTGATGGAGCCAG+TGG | 0.554699 | 5.1:+6049532 | None:intergenic |
| CACTTGCGAATGAGCAATTG+AGG | 0.554721 | 5.1:-6049502 | MS.gene21220:CDS |
| CATGGTTATCTTTGTAGCAG+TGG | 0.560794 | 5.1:-6051067 | MS.gene21220:CDS |
| AGCAGTTGCAGAAGTAGTCA+AGG | 0.560970 | 5.1:+6051706 | None:intergenic |
| CAATGAAGATCCGTAAAAGC+AGG | 0.562366 | 5.1:+6053962 | None:intergenic |
| GAACGAGATGAAGATCGTTT+GGG | 0.563331 | 5.1:-6055741 | MS.gene21220:CDS |
| CAACCCTGCAGTGCAAGCAT+GGG | 0.566409 | 5.1:+6051733 | None:intergenic |
| GCAGCAGGATATTCCTGGAA+AGG | 0.567632 | 5.1:-6049633 | MS.gene21220:CDS |
| AGACAGTTTGGATCTCAAAA+GGG | 0.569780 | 5.1:-6052300 | MS.gene21220:CDS |
| ATATCTCCAACAGTTATACC+TGG | 0.572810 | 5.1:+6053243 | None:intergenic |
| ATGTTTGTGCCTGCTATCAA+AGG | 0.573087 | 5.1:-6053854 | MS.gene21220:CDS |
| CTTTCAGATTTGTTAGTGAG+TGG | 0.573344 | 5.1:-6051823 | MS.gene21220:CDS |
| GAGATGAAGATCGTTTGGGC+TGG | 0.574203 | 5.1:-6055737 | MS.gene21220:CDS |
| CCAACAGTTATACCTGGAAG+AGG | 0.574242 | 5.1:+6053249 | None:intergenic |
| ATTTGCATCTTATAAGCTAG+AGG | 0.575521 | 5.1:+6053797 | None:intergenic |
| GGTCAAGACCAAGGAGTGCA+TGG | 0.576160 | 5.1:-6053388 | MS.gene21220:intron |
| TAAATCTCATATAGGTGGCA+AGG | 0.577709 | 5.1:-6050758 | MS.gene21220:intron |
| TCTCCTTCATATGTGCAGGC+AGG | 0.579083 | 5.1:+6051016 | None:intergenic |
| GTTTCACAGGTCACCAGAGA+AGG | 0.583143 | 5.1:-6052459 | MS.gene21220:CDS |
| GCATATGCAGAAGCTAGCAA+TGG | 0.584283 | 5.1:+6051845 | None:intergenic |
| GGCTCTGGAAAGAAACCTGT+TGG | 0.584413 | 5.1:-6050708 | MS.gene21220:CDS |
| TAAAACAGTGGTGGCCTGGT+GGG | 0.591300 | 5.1:-6053462 | MS.gene21220:intron |
| GGCATAAACAATAGCATGTG+TGG | 0.591430 | 5.1:+6053426 | None:intergenic |
| TCTTAGAACTCCATTATCCA+TGG | 0.592823 | 5.1:+6053188 | None:intergenic |
| CTTGACCTTCAGTAATAAGA+CGG | 0.594347 | 5.1:+6053404 | None:intergenic |
| AAGGTTTCATTGTCCAGCTG+CGG | 0.596773 | 5.1:-6053290 | MS.gene21220:CDS |
| GGCTCCATCACTGAAGAACA+AGG | 0.597881 | 5.1:-6049527 | MS.gene21220:CDS |
| AAGTTCTCTAATCCCGAAGA+GGG | 0.598155 | 5.1:-6050421 | MS.gene21220:intron |
| GTATCCTAAGTTGTATGAAG+AGG | 0.601269 | 5.1:-6049284 | MS.gene21220:CDS |
| TTGACCTTCAGTAATAAGAC+GGG | 0.605559 | 5.1:+6053405 | None:intergenic |
| AGGGAATTCATTCACCGGAT+CGG | 0.609839 | 5.1:+6055664 | None:intergenic |
| AAGAATTCGAACTTTCCGAT+CGG | 0.613870 | 5.1:-6055706 | MS.gene21220:CDS |
| AAAAGCAGGCTCATCTACAA+AGG | 0.616170 | 5.1:+6053976 | None:intergenic |
| GGAACAACTGAATCGTTCAA+AGG | 0.616487 | 5.1:+6049250 | None:intergenic |
| GAAGAATGCCGTAAACTATG+TGG | 0.617105 | 5.1:-6051094 | MS.gene21220:CDS |
| TTGACCACGTACGAATTCCA+AGG | 0.620364 | 5.1:-6053164 | MS.gene21220:CDS |
| TAACTCCTTTCTATCAAGCG+AGG | 0.623911 | 5.1:+6054216 | None:intergenic |
| GTCATGGATCCAATGTTCAA+GGG | 0.628601 | 5.1:-6053745 | MS.gene21220:CDS |
| CAGTTTGGATCTCAAAAGGG+AGG | 0.635177 | 5.1:-6052297 | MS.gene21220:CDS |
| ACATAAACTGCAAATAACTC+AGG | 0.635644 | 5.1:+6051040 | None:intergenic |
| CACTCGAGCCAAATAAGCTG+TGG | 0.637022 | 5.1:+6050683 | None:intergenic |
| CAAGTTCTCTAATCCCGAAG+AGG | 0.637179 | 5.1:-6050422 | MS.gene21220:CDS |
| CAAAAGACTCACCATTAAGA+CGG | 0.639710 | 5.1:+6054140 | None:intergenic |
| GATTGATTACAAAACACAGC+AGG | 0.643464 | 5.1:-6051879 | MS.gene21220:CDS |
| CTTTGCTGGAAGTCAATGTG+GGG | 0.645764 | 5.1:+6053669 | None:intergenic |
| GTGCCTGCTATCAAAGGACA+AGG | 0.649149 | 5.1:-6053848 | MS.gene21220:CDS |
| AGTTTGGATCTCAAAAGGGA+GGG | 0.652268 | 5.1:-6052296 | MS.gene21220:CDS |
| GATTCCTTGGAATTCGTACG+TGG | 0.656382 | 5.1:+6053160 | None:intergenic |
| TCATTTCTAGGCATTCCGAA+AGG | 0.658002 | 5.1:-6054248 | MS.gene21220:intron |
| TTAAAACAGTGGTGGCCTGG+TGG | 0.662083 | 5.1:-6053463 | MS.gene21220:intron |
| ACTCTCGGTTGATTTAGTTG+AGG | 0.663652 | 5.1:-6050039 | MS.gene21220:CDS |
| AACAAGACGAGAAATCCGAT+CGG | 0.674165 | 5.1:+6055691 | None:intergenic |
| ATTACTGAAGGTCAAGACCA+AGG | 0.676630 | 5.1:-6053397 | MS.gene21220:CDS |
| ATGGAACTATGGTATATGTG+AGG | 0.679777 | 5.1:-6052398 | MS.gene21220:CDS |
| GAATGCCGTAAACTATGTGG+CGG | 0.687324 | 5.1:-6051091 | MS.gene21220:CDS |
| GTGGCTGAAATGGCTTTACA+CGG | 0.695378 | 5.1:-6051804 | MS.gene21220:CDS |
| AAATGCAGCATATAACACCA+TGG | 0.704725 | 5.1:-6053205 | MS.gene21220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAAAATGATTAGAAA+AGG | + | chr5.1:6052435-6052454 | None:intergenic | 10.0% |
| !! | CTAAAAAAAATCAATATTAA+CGG | + | chr5.1:6050087-6050106 | None:intergenic | 10.0% |
| !! | TAATATGTTTAAATTATCAA+AGG | + | chr5.1:6049554-6049573 | None:intergenic | 10.0% |
| !!! | TTTATGTTATTTTATTACTT+GGG | - | chr5.1:6050886-6050905 | MS.gene21220:intron | 10.0% |
| !!! | TTTTTAAAAAGTTATAACAA+AGG | + | chr5.1:6049763-6049782 | None:intergenic | 10.0% |
| !! | AATTTAACTGTATAATAAGA+AGG | - | chr5.1:6055557-6055576 | MS.gene21220:intron | 15.0% |
| !! | ACAACTTAATTAAAATGATT+TGG | + | chr5.1:6052872-6052891 | None:intergenic | 15.0% |
| !! | ATTAATTATTTGATATTGAC+TGG | - | chr5.1:6052998-6053017 | MS.gene21220:intron | 15.0% |
| !! | GACAGATTTAATAATTTAAA+GGG | - | chr5.1:6050327-6050346 | MS.gene21220:intron | 15.0% |
| !! | TGACAGATTTAATAATTTAA+AGG | - | chr5.1:6050326-6050345 | MS.gene21220:intron | 15.0% |
| !! | TTGAAATGAACAATAAATTA+AGG | + | chr5.1:6053680-6053699 | None:intergenic | 15.0% |
| !! | TTTATACAAAAACTCTATTA+AGG | - | chr5.1:6054831-6054850 | MS.gene21220:intron | 15.0% |
| !!! | AACACATTTTAATCATTTAA+AGG | + | chr5.1:6053747-6053766 | None:intergenic | 15.0% |
| !!! | CAAAAATAGATTTTTTTTAG+AGG | - | chr5.1:6049836-6049855 | MS.gene21220:intron | 15.0% |
| !!! | CATTTTAATTAAGTTGTTAT+TGG | - | chr5.1:6052875-6052894 | MS.gene21220:intron | 15.0% |
| !!! | GTTTATGTTATTTTATTACT+TGG | - | chr5.1:6050885-6050904 | MS.gene21220:intron | 15.0% |
| !!! | TGTTTTAAATCAACAATAAA+AGG | + | chr5.1:6051505-6051524 | None:intergenic | 15.0% |
| !!! | TTTTTAATGCAATTGTTAAT+AGG | - | chr5.1:6052244-6052263 | MS.gene21220:intron | 15.0% |
| !! | AGTATAATATCACAAATCAA+AGG | + | chr5.1:6054431-6054450 | None:intergenic | 20.0% |
| !! | ATGAAAAGTAATTAAGGAAA+GGG | + | chr5.1:6055163-6055182 | None:intergenic | 20.0% |
| !! | GAAATTTGGATGATTAAATT+TGG | + | chr5.1:6051624-6051643 | None:intergenic | 20.0% |
| !! | TAAAAAAATCAAAACACCTA+TGG | + | chr5.1:6054671-6054690 | None:intergenic | 20.0% |
| !! | TCAATCTTTGATTATTAACA+AGG | + | chr5.1:6052196-6052215 | None:intergenic | 20.0% |
| !! | TGATGAAAGTGATAAAAAAA+AGG | - | chr5.1:6052816-6052835 | MS.gene21220:intron | 20.0% |
| !! | TTTAGATTTCAAACTCATAT+CGG | + | chr5.1:6053581-6053600 | None:intergenic | 20.0% |
| !!! | AAAATAACTGTAAAAGCTTT+TGG | + | chr5.1:6051359-6051378 | None:intergenic | 20.0% |
| !!! | AAATAACTGTAAAAGCTTTT+GGG | + | chr5.1:6051358-6051377 | None:intergenic | 20.0% |
| !!! | AAGTATTTTTACTCATGTAT+TGG | + | chr5.1:6052045-6052064 | None:intergenic | 20.0% |
| !!! | AATTATTCATATTCTTTTGC+AGG | - | chr5.1:6051101-6051120 | MS.gene21220:CDS | 20.0% |
| !!! | AGAGATTTGTTTTTTTTTAG+AGG | - | chr5.1:6050179-6050198 | MS.gene21220:intron | 20.0% |
| !!! | ATGTTTTTTAGGAATTATCT+TGG | - | chr5.1:6054181-6054200 | MS.gene21220:CDS | 20.0% |
| !!! | ATTATTCATATTCTTTTGCA+GGG | - | chr5.1:6051102-6051121 | MS.gene21220:CDS | 20.0% |
| !!! | CAAAATAATTCTAGTTTGTT+TGG | + | chr5.1:6049931-6049950 | None:intergenic | 20.0% |
| !!! | CAAAATTTCATTAATTTGAG+AGG | - | chr5.1:6050153-6050172 | MS.gene21220:intron | 20.0% |
| !!! | TCGTAATCTTTTTATATCTT+AGG | - | chr5.1:6054368-6054387 | MS.gene21220:intron | 20.0% |
| !!! | TGTTTTTTAGGAATTATCTT+GGG | - | chr5.1:6054182-6054201 | MS.gene21220:CDS | 20.0% |
| !!! | TTATTGTTGATTTAAAACAG+TGG | - | chr5.1:6051506-6051525 | MS.gene21220:intron | 20.0% |
| !!! | TTATTTTAATCCGTAACAAA+CGG | - | chr5.1:6050060-6050079 | MS.gene21220:intron | 20.0% |
| !!! | TTTACAGTTATTTTCTGTTT+GGG | - | chr5.1:6051365-6051384 | MS.gene21220:intron | 20.0% |
| !!! | TTTTAAATAACTTGCACAAA+AGG | - | chr5.1:6050429-6050448 | MS.gene21220:CDS | 20.0% |
| !!! | TTTTACAGTTATTTTCTGTT+TGG | - | chr5.1:6051364-6051383 | MS.gene21220:intron | 20.0% |
| ! | AAAACATTAACTAATCACCA+AGG | + | chr5.1:6050586-6050605 | None:intergenic | 25.0% |
| ! | AACATAAGGAGATAGATTAA+GGG | + | chr5.1:6053428-6053447 | None:intergenic | 25.0% |
| ! | AATTAATGCAAAGATGAAGA+GGG | + | chr5.1:6052985-6053004 | None:intergenic | 25.0% |
| ! | ACAACTAGTAAATCTCATAT+AGG | - | chr5.1:6054214-6054233 | MS.gene21220:CDS | 25.0% |
| ! | ACAGTTAATTTATGGAACTA+TGG | - | chr5.1:6052571-6052590 | MS.gene21220:intron | 25.0% |
| ! | AGATTTAGAGATTAATGAGT+TGG | - | chr5.1:6050207-6050226 | MS.gene21220:intron | 25.0% |
| ! | ATAAAATAACTTCCATTCAC+AGG | - | chr5.1:6053855-6053874 | MS.gene21220:CDS | 25.0% |
| ! | ATAGAGAAAAAGAAAGAAAG+AGG | + | chr5.1:6049339-6049358 | None:intergenic | 25.0% |
| ! | ATATTACTTTCTATGCTGAT+TGG | - | chr5.1:6053312-6053331 | MS.gene21220:intron | 25.0% |
| ! | ATCAAATTATTTACCCTCTT+CGG | + | chr5.1:6054575-6054594 | None:intergenic | 25.0% |
| ! | ATCCAAATGAATCAACAATT+TGG | + | chr5.1:6050353-6050372 | None:intergenic | 25.0% |
| ! | ATGAATGAATAGCATTTCTT+TGG | - | chr5.1:6052121-6052140 | MS.gene21220:intron | 25.0% |
| ! | ATTTAGAGATTAGTGACATA+AGG | - | chr5.1:6050240-6050259 | MS.gene21220:intron | 25.0% |
| ! | CAATTGCATTAAAAAAGAAG+TGG | + | chr5.1:6052239-6052258 | None:intergenic | 25.0% |
| ! | CACTAATCTCTAAATCATTT+AGG | + | chr5.1:6050235-6050254 | None:intergenic | 25.0% |
| ! | CATGAAAAGTAATTAAGGAA+AGG | + | chr5.1:6055164-6055183 | None:intergenic | 25.0% |
| ! | CTATTAACGAGAAATTGTTT+AGG | + | chr5.1:6055525-6055544 | None:intergenic | 25.0% |
| ! | CTCTACATGAAAAGTAATTA+AGG | + | chr5.1:6055169-6055188 | None:intergenic | 25.0% |
| ! | GATTACTAAACAATGGAAAA+CGG | + | chr5.1:6054045-6054064 | None:intergenic | 25.0% |
| ! | GCTTATAAGATGCAAATAAT+TGG | - | chr5.1:6051189-6051208 | MS.gene21220:intron | 25.0% |
| ! | TAACAGAGATTACTAAACAA+TGG | + | chr5.1:6054052-6054071 | None:intergenic | 25.0% |
| ! | TAATCATTTAAAGGAAGAGA+AGG | + | chr5.1:6053738-6053757 | None:intergenic | 25.0% |
| ! | TAATTAATGCAAAGATGAAG+AGG | + | chr5.1:6052986-6053005 | None:intergenic | 25.0% |
| ! | TAGAGAAAAAGAAAGAAAGA+GGG | + | chr5.1:6049338-6049357 | None:intergenic | 25.0% |
| ! | TATCAATCTGATGTTAAAAG+AGG | - | chr5.1:6054335-6054354 | MS.gene21220:intron | 25.0% |
| ! | TCAACTTTAACATGTAATGT+AGG | - | chr5.1:6050618-6050637 | MS.gene21220:intron | 25.0% |
| ! | TCATTTCAACTATTTGTATG+CGG | - | chr5.1:6053691-6053710 | MS.gene21220:CDS | 25.0% |
| ! | TCTTTGTCAATAGAATAATG+TGG | - | chr5.1:6052470-6052489 | MS.gene21220:intron | 25.0% |
| ! | TGAAAAATATCAAATGTCAC+AGG | + | chr5.1:6050925-6050944 | None:intergenic | 25.0% |
| ! | TGAAAAGTAATTAAGGAAAG+GGG | + | chr5.1:6055162-6055181 | None:intergenic | 25.0% |
| !! | TCTTTTTATATCTTAGGCAA+TGG | - | chr5.1:6054374-6054393 | MS.gene21220:intron | 25.0% |
| !!! | AAGGCTTGATTTTTTTTTTG+AGG | - | chr5.1:6050259-6050278 | MS.gene21220:intron | 25.0% |
| !!! | AGGCTAGATTTTGAAAATTT+TGG | - | chr5.1:6050468-6050487 | MS.gene21220:CDS | 25.0% |
| !!! | AGGCTTGATTTTTTTTTTGA+GGG | - | chr5.1:6050260-6050279 | MS.gene21220:intron | 25.0% |
| !!! | AGGTAAGTTTTAAAACCTAT+TGG | - | chr5.1:6052717-6052736 | MS.gene21220:intron | 25.0% |
| !!! | ATTTGTCACTTTAGAATTTG+AGG | + | chr5.1:6049648-6049667 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTTTGAGGGGATA+TGG | - | chr5.1:6050267-6050286 | MS.gene21220:intron | 25.0% |
| !!! | GAATATTTTGAAGACATTGA+TGG | - | chr5.1:6053512-6053531 | MS.gene21220:intron | 25.0% |
| !!! | GATTTTGTGTGTTGTTATTT+AGG | - | chr5.1:6055585-6055604 | MS.gene21220:intron | 25.0% |
| !!! | GTTGTTTTTAATTAATGTGC+CGG | - | chr5.1:6055028-6055047 | MS.gene21220:intron | 25.0% |
| !!! | TAACTATATGTGCTATTTGA+AGG | - | chr5.1:6051671-6051690 | MS.gene21220:intron | 25.0% |
| !!! | TAGATTTTGAAAATTTTGGC+AGG | - | chr5.1:6050472-6050491 | MS.gene21220:CDS | 25.0% |
| !!! | TATTTTAATCCGTAACAAAC+GGG | - | chr5.1:6050061-6050080 | MS.gene21220:intron | 25.0% |
| AAACAGAATCTAGATAGCAT+TGG | + | chr5.1:6049458-6049477 | None:intergenic | 30.0% | |
| AAACCTCAAACTAAGATTAC+CGG | + | chr5.1:6051910-6051929 | None:intergenic | 30.0% | |
| AATACAGACAAATAAGCTTG+AGG | + | chr5.1:6051468-6051487 | None:intergenic | 30.0% | |
| AATGCTTCAATCACTACATT+AGG | + | chr5.1:6054490-6054509 | None:intergenic | 30.0% | |
| AATTAACTGTCTTGGAACAT+TGG | + | chr5.1:6052561-6052580 | None:intergenic | 30.0% | |
| ACATAAACTGCAAATAACTC+AGG | + | chr5.1:6053943-6053962 | None:intergenic | 30.0% | |
| ACTAGTAAATCTCATATAGG+TGG | - | chr5.1:6054217-6054236 | MS.gene21220:CDS | 30.0% | |
| AGAATATAGACCTGTTCTTT+CGG | + | chr5.1:6055118-6055137 | None:intergenic | 30.0% | |
| ATCACCAAACTAAAAAGCAA+AGG | + | chr5.1:6050662-6050681 | None:intergenic | 30.0% | |
| ATGTGACATGGTACAATTAA+AGG | + | chr5.1:6053792-6053811 | None:intergenic | 30.0% | |
| ATTCAAAGATTTCAATGCCT+TGG | - | chr5.1:6050566-6050585 | MS.gene21220:intron | 30.0% | |
| ATTTATCACATTACACCTTC+TGG | - | chr5.1:6049683-6049702 | MS.gene21220:intron | 30.0% | |
| ATTTCTTCTTCATAAGCATC+TGG | - | chr5.1:6055413-6055432 | MS.gene21220:intron | 30.0% | |
| ATTTGCATCTTATAAGCTAG+AGG | + | chr5.1:6051186-6051205 | None:intergenic | 30.0% | |
| CAACATAAGGAGATAGATTA+AGG | + | chr5.1:6053429-6053448 | None:intergenic | 30.0% | |
| CAAGCTTATTTGTCTGTATT+TGG | - | chr5.1:6051468-6051487 | MS.gene21220:intron | 30.0% | |
| CAAGGAATCAAATGTTAATG+AGG | - | chr5.1:6051834-6051853 | MS.gene21220:CDS | 30.0% | |
| CAATCTATTTGTAAAACTGC+AGG | + | chr5.1:6054709-6054728 | None:intergenic | 30.0% | |
| CATTATCTTCAAGTGAATAC+CGG | - | chr5.1:6052070-6052089 | MS.gene21220:intron | 30.0% | |
| CATTTCAACTATTTGTATGC+GGG | - | chr5.1:6053692-6053711 | MS.gene21220:CDS | 30.0% | |
| CCTAAAAAACATCCTAAATC+AGG | + | chr5.1:6054173-6054192 | None:intergenic | 30.0% | |
| CTAATAGTTTCTCTGATGTT+AGG | - | chr5.1:6054909-6054928 | MS.gene21220:intron | 30.0% | |
| CTATAAATCTGAAAAACACG+AGG | + | chr5.1:6055320-6055339 | None:intergenic | 30.0% | |
| CTCATTAACATTTGATTCCT+TGG | + | chr5.1:6051836-6051855 | None:intergenic | 30.0% | |
| CTGGCTACAATAAAATTGAA+TGG | - | chr5.1:6053017-6053036 | MS.gene21220:intron | 30.0% | |
| GAAAAGTAATTAAGGAAAGG+GGG | + | chr5.1:6055161-6055180 | None:intergenic | 30.0% | |
| GAATTCAGTAGAAACTTACT+TGG | + | chr5.1:6055000-6055019 | None:intergenic | 30.0% | |
| GGAGATATAGGAATGAAATT+TGG | - | chr5.1:6051752-6051771 | MS.gene21220:CDS | 30.0% | |
| GTTCCAAGACAGTTAATTTA+TGG | - | chr5.1:6052563-6052582 | MS.gene21220:intron | 30.0% | |
| GTTCCATAAATTAACTGTCT+TGG | + | chr5.1:6052569-6052588 | None:intergenic | 30.0% | |
| TAACTAGATGAACTATGAAC+TGG | + | chr5.1:6050543-6050562 | None:intergenic | 30.0% | |
| TATAAATCAACCAATCCAGA+AGG | + | chr5.1:6049701-6049720 | None:intergenic | 30.0% | |
| TATCTTGATTGACGTGTTAT+TGG | - | chr5.1:6054642-6054661 | MS.gene21220:intron | 30.0% | |
| TCAAATTATTTACCCTCTTC+GGG | + | chr5.1:6054574-6054593 | None:intergenic | 30.0% | |
| TGAGTCTAACACAAGAAATT+TGG | + | chr5.1:6051638-6051657 | None:intergenic | 30.0% | |
| TGTGACATGGTACAATTAAA+GGG | + | chr5.1:6053791-6053810 | None:intergenic | 30.0% | |
| TTAAAACTTACCTGTGTTTC+AGG | + | chr5.1:6052710-6052729 | None:intergenic | 30.0% | |
| TTGTTTATCTACTTCCATGT+GGG | - | chr5.1:6054074-6054093 | MS.gene21220:intron | 30.0% | |
| TTTCTTCTTCATAAGCATCT+GGG | - | chr5.1:6055414-6055433 | MS.gene21220:intron | 30.0% | |
| TTTGTTTATCTACTTCCATG+TGG | - | chr5.1:6054073-6054092 | MS.gene21220:intron | 30.0% | |
| ! | AAACTAAAAAGCAAAGGTGT+GGG | + | chr5.1:6050656-6050675 | None:intergenic | 30.0% |
| ! | ATAATGAACTCGTCTGTTTT+TGG | + | chr5.1:6051285-6051304 | None:intergenic | 30.0% |
| ! | GTGAAAACTATTTCTCAGTT+GGG | - | chr5.1:6054251-6054270 | MS.gene21220:intron | 30.0% |
| ! | TAATTGTCATTTGTGCAACA+CGG | - | chr5.1:6054866-6054885 | MS.gene21220:intron | 30.0% |
| ! | TGTGAAAACTATTTCTCAGT+TGG | - | chr5.1:6054250-6054269 | MS.gene21220:intron | 30.0% |
| ! | TTGTACATATTTTCCTTCTC+TGG | + | chr5.1:6052537-6052556 | None:intergenic | 30.0% |
| !! | CTTTTTATTTCTTTCAGCTG+AGG | - | chr5.1:6054453-6054472 | MS.gene21220:intron | 30.0% |
| !! | TCATTTTCTTCCGTTTTTCT+CGG | - | chr5.1:6049424-6049443 | MS.gene21220:intron | 30.0% |
| !! | TTGATCATTTAGCTTTCGAA+AGG | - | chr5.1:6049196-6049215 | MS.gene21220:CDS | 30.0% |
| !! | TTGTTGATTCACACTAACTA+AGG | + | chr5.1:6049619-6049638 | None:intergenic | 30.0% |
| !! | TTGTTGATTTAAAACAGTGG+TGG | - | chr5.1:6051509-6051528 | MS.gene21220:intron | 30.0% |
| !!! | AACTAAGATTACCGGTTTTA+AGG | + | chr5.1:6051902-6051921 | None:intergenic | 30.0% |
| !!! | ACTACACTGTGTACTTTTTT+CGG | + | chr5.1:6055258-6055277 | None:intergenic | 30.0% |
| !!! | ACTTTTTTCGGACTACTTTA+AGG | + | chr5.1:6055246-6055265 | None:intergenic | 30.0% |
| !!! | CCTGATTTAGGATGTTTTTT+AGG | - | chr5.1:6054170-6054189 | MS.gene21220:CDS | 30.0% |
| !!! | GGCTTGATTTTTTTTTTGAG+GGG | - | chr5.1:6050261-6050280 | MS.gene21220:intron | 30.0% |
| AAACAGCTTATGCATGGAAA+AGG | - | chr5.1:6050806-6050825 | MS.gene21220:intron | 35.0% | |
| AAATGACAAACAACGAAGCA+AGG | + | chr5.1:6050718-6050737 | None:intergenic | 35.0% | |
| AAATGCAGCATATAACACCA+TGG | - | chr5.1:6051775-6051794 | MS.gene21220:CDS | 35.0% | |
| AAGAATTCGAACTTTCCGAT+CGG | - | chr5.1:6049274-6049293 | MS.gene21220:CDS | 35.0% | |
| AAGACAGTTTGGATCTCAAA+AGG | - | chr5.1:6052679-6052698 | MS.gene21220:intron | 35.0% | |
| AAGGTGGAACTATAGAAATG+AGG | + | chr5.1:6053462-6053481 | None:intergenic | 35.0% | |
| AATAACTTCCATTCACAGGA+TGG | - | chr5.1:6053859-6053878 | MS.gene21220:CDS | 35.0% | |
| AATTCATCACTCTGTTGTGA+TGG | - | chr5.1:6052366-6052385 | MS.gene21220:CDS | 35.0% | |
| AATTCTACACAGGATGAAGA+CGG | + | chr5.1:6052350-6052369 | None:intergenic | 35.0% | |
| ACTTGGAAACAACGATTAAC+TGG | + | chr5.1:6054983-6055002 | None:intergenic | 35.0% | |
| AGAAAAGCAAACAGGAACAA+AGG | - | chr5.1:6052323-6052342 | MS.gene21220:CDS | 35.0% | |
| AGACAGTTTGGATCTCAAAA+GGG | - | chr5.1:6052680-6052699 | MS.gene21220:intron | 35.0% | |
| AGATAACTGGATAGAAACGA+CGG | - | chr5.1:6052297-6052316 | MS.gene21220:CDS | 35.0% | |
| AGCAATATACTTGCACCAAT+AGG | + | chr5.1:6052735-6052754 | None:intergenic | 35.0% | |
| AGGAAATGAGCTTCAACATA+AGG | + | chr5.1:6053442-6053461 | None:intergenic | 35.0% | |
| AGTATGTTCAACCAATGCTT+AGG | - | chr5.1:6055767-6055786 | MS.gene21220:CDS | 35.0% | |
| ATAAGGAGATAGATTAAGGG+AGG | + | chr5.1:6053425-6053444 | None:intergenic | 35.0% | |
| ATATCTCCAACAGTTATACC+TGG | + | chr5.1:6051740-6051759 | None:intergenic | 35.0% | |
| ATGGAACTATGGTATATGTG+AGG | - | chr5.1:6052582-6052601 | MS.gene21220:intron | 35.0% | |
| ATGTGGGTGAATTCACAAAA+TGG | - | chr5.1:6052004-6052023 | MS.gene21220:intron | 35.0% | |
| ATTCATCACTCTGTTGTGAT+GGG | - | chr5.1:6052367-6052386 | MS.gene21220:CDS | 35.0% | |
| ATTTATAGAGAAGTTGCAGC+AGG | - | chr5.1:6055332-6055351 | MS.gene21220:intron | 35.0% | |
| CAAAAGACTCACCATTAAGA+CGG | + | chr5.1:6050843-6050862 | None:intergenic | 35.0% | |
| CAAACTAAAAAGCAAAGGTG+TGG | + | chr5.1:6050657-6050676 | None:intergenic | 35.0% | |
| CATTTGTGGAATCTCACTAA+AGG | + | chr5.1:6053385-6053404 | None:intergenic | 35.0% | |
| CTATTTGTAAAACTGCAGGT+GGG | + | chr5.1:6054705-6054724 | None:intergenic | 35.0% | |
| CTTGACCTTCAGTAATAAGA+CGG | + | chr5.1:6051579-6051598 | None:intergenic | 35.0% | |
| GAAAAGCAAACAGGAACAAA+GGG | - | chr5.1:6052324-6052343 | MS.gene21220:CDS | 35.0% | |
| GAATATAGACCTGTTCTTTC+GGG | + | chr5.1:6055117-6055136 | None:intergenic | 35.0% | |
| GATAAAGCTGTATAGGAAAC+AGG | + | chr5.1:6051064-6051083 | None:intergenic | 35.0% | |
| GATAAATGAACAACACACAC+AGG | + | chr5.1:6054626-6054645 | None:intergenic | 35.0% | |
| GATTGATTACAAAACACAGC+AGG | - | chr5.1:6053101-6053120 | MS.gene21220:intron | 35.0% | |
| GCATATAACACCATGGATAA+TGG | - | chr5.1:6051782-6051801 | MS.gene21220:CDS | 35.0% | |
| GGTATAACTGTTGGAGATAT+AGG | - | chr5.1:6051740-6051759 | MS.gene21220:CDS | 35.0% | |
| GTATCCTAAGTTGTATGAAG+AGG | - | chr5.1:6055696-6055715 | MS.gene21220:CDS | 35.0% | |
| TAAATCAGGCAGCTAATGTA+AGG | + | chr5.1:6054159-6054178 | None:intergenic | 35.0% | |
| TAAATCTCATATAGGTGGCA+AGG | - | chr5.1:6054222-6054241 | MS.gene21220:CDS | 35.0% | |
| TACGTGTGTACTTAGATAAC+TGG | - | chr5.1:6052284-6052303 | MS.gene21220:CDS | 35.0% | |
| TATTTCTTTCAGCTGAGGAT+TGG | - | chr5.1:6054458-6054477 | MS.gene21220:intron | 35.0% | |
| TCAACAAGCGAAATTGCATT+AGG | + | chr5.1:6055616-6055635 | None:intergenic | 35.0% | |
| TCTATTTGTAAAACTGCAGG+TGG | + | chr5.1:6054706-6054725 | None:intergenic | 35.0% | |
| TCTTAGAACTCCATTATCCA+TGG | + | chr5.1:6051795-6051814 | None:intergenic | 35.0% | |
| TGAGAAAAACAGCTTATGCA+TGG | - | chr5.1:6050800-6050819 | MS.gene21220:intron | 35.0% | |
| TGTGCTATCTGTTTCGATTT+AGG | - | chr5.1:6053077-6053096 | MS.gene21220:intron | 35.0% | |
| TGTGGGTGAATTCACAAAAT+GGG | - | chr5.1:6052005-6052024 | MS.gene21220:intron | 35.0% | |
| TTACATTAGCTGCCTGATTT+AGG | - | chr5.1:6054158-6054177 | MS.gene21220:CDS | 35.0% | |
| TTGACCTTCAGTAATAAGAC+GGG | + | chr5.1:6051578-6051597 | None:intergenic | 35.0% | |
| TTTGAACGATTCAGTTGTTC+CGG | - | chr5.1:6055732-6055751 | MS.gene21220:CDS | 35.0% | |
| ! | AAAATCTAGCCTTTCAAGAG+GGG | + | chr5.1:6050460-6050479 | None:intergenic | 35.0% |
| ! | AAACCGGTAATCTTAGTTTG+AGG | - | chr5.1:6051904-6051923 | MS.gene21220:intron | 35.0% |
| ! | CAAAATCTAGCCTTTCAAGA+GGG | + | chr5.1:6050461-6050480 | None:intergenic | 35.0% |
| ! | CTTCGTTGTTTGTCATTTCT+AGG | - | chr5.1:6050720-6050739 | MS.gene21220:CDS | 35.0% |
| ! | GATTGAAGCATTTGAAGCTA+GGG | - | chr5.1:6054498-6054517 | MS.gene21220:intron | 35.0% |
| ! | GTTTCCTATACAGCTTTATC+AGG | - | chr5.1:6051064-6051083 | MS.gene21220:CDS | 35.0% |
| ! | GTTTTTGCAATTCTTGTAGC+AGG | - | chr5.1:6052945-6052964 | MS.gene21220:intron | 35.0% |
| ! | TCAAAATCTAGCCTTTCAAG+AGG | + | chr5.1:6050462-6050481 | None:intergenic | 35.0% |
| ! | TGAAGTTTTTGCCTAAGCAT+TGG | + | chr5.1:6055781-6055800 | None:intergenic | 35.0% |
| ! | TGATTGAAGCATTTGAAGCT+AGG | - | chr5.1:6054497-6054516 | MS.gene21220:intron | 35.0% |
| ! | TGCTTTTACGGATCTTCATT+GGG | - | chr5.1:6051020-6051039 | MS.gene21220:CDS | 35.0% |
| !! | ACATACTCTTTAAAGCCATC+CGG | + | chr5.1:6055754-6055773 | None:intergenic | 35.0% |
| !! | ACTCTGTTTTTCAATCTACC+AGG | - | chr5.1:6052498-6052517 | MS.gene21220:intron | 35.0% |
| !! | CTCTGTTTTTCAATCTACCA+GGG | - | chr5.1:6052499-6052518 | MS.gene21220:intron | 35.0% |
| !! | CTTTCAGATTTGTTAGTGAG+TGG | - | chr5.1:6053157-6053176 | MS.gene21220:CDS | 35.0% |
| !! | GGCCAAATTGTTGATTCATT+TGG | - | chr5.1:6050348-6050367 | MS.gene21220:intron | 35.0% |
| !!! | AAGATTACCGGTTTTAAGGT+TGG | + | chr5.1:6051898-6051917 | None:intergenic | 35.0% |
| !!! | CACACCTTTGCTTTTTAGTT+TGG | - | chr5.1:6050655-6050674 | MS.gene21220:CDS | 35.0% |
| AAAAGCAGGCTCATCTACAA+AGG | + | chr5.1:6051007-6051026 | None:intergenic | 40.0% | |
| AAATAAGCTGTGGTACCAAC+AGG | + | chr5.1:6054290-6054309 | None:intergenic | 40.0% | |
| AACAAGACGAGAAATCCGAT+CGG | + | chr5.1:6049292-6049311 | None:intergenic | 40.0% | |
| AACCACTAGGCAATGTATGT+GGG | - | chr5.1:6051988-6052007 | MS.gene21220:intron | 40.0% | |
| AACTACACTGATCACTTGCT+TGG | - | chr5.1:6055643-6055662 | MS.gene21220:intron | 40.0% | |
| AACTATGGTATATGTGAGGC+AGG | - | chr5.1:6052586-6052605 | MS.gene21220:intron | 40.0% | |
| AAGTTCTCTAATCCCGAAGA+GGG | - | chr5.1:6054559-6054578 | MS.gene21220:intron | 40.0% | |
| ACAGCCTGATAAAGCTGTAT+AGG | + | chr5.1:6051071-6051090 | None:intergenic | 40.0% | |
| ACATACATTGCCTAGTGGTT+AGG | + | chr5.1:6051988-6052007 | None:intergenic | 40.0% | |
| ACCTTAAATATTCCCCCTAC+CGG | + | chr5.1:6052092-6052111 | None:intergenic | 40.0% | |
| ACTTTGCTGGAAGTCAATGT+GGG | + | chr5.1:6051315-6051334 | None:intergenic | 40.0% | |
| AGGACAAACCTGTGAATACA+AGG | + | chr5.1:6055505-6055524 | None:intergenic | 40.0% | |
| AGTCTCACCAACCTTAAAAC+CGG | - | chr5.1:6051888-6051907 | MS.gene21220:intron | 40.0% | |
| AGTTTGGATCTCAAAAGGGA+GGG | - | chr5.1:6052684-6052703 | MS.gene21220:intron | 40.0% | |
| ATCTTCAAGTGAATACCGGT+AGG | - | chr5.1:6052074-6052093 | MS.gene21220:intron | 40.0% | |
| ATGTTTGTGCCTGCTATCAA+AGG | - | chr5.1:6051126-6051145 | MS.gene21220:intron | 40.0% | |
| ATTACTGAAGGTCAAGACCA+AGG | - | chr5.1:6051583-6051602 | MS.gene21220:intron | 40.0% | |
| ATTGAGGTCCTTGTATTCAC+AGG | - | chr5.1:6055494-6055513 | MS.gene21220:intron | 40.0% | |
| ATTGGATCCATGACCAAGTT+CGG | + | chr5.1:6051229-6051248 | None:intergenic | 40.0% | |
| ATTGTCTCCTTCATATGTGC+AGG | + | chr5.1:6053971-6053990 | None:intergenic | 40.0% | |
| CAAGCCTCTTCATACAACTT+AGG | + | chr5.1:6055703-6055722 | None:intergenic | 40.0% | |
| CAATGAAGATCCGTAAAAGC+AGG | + | chr5.1:6051021-6051040 | None:intergenic | 40.0% | |
| CAGAGTGATGAATTCTACAC+AGG | + | chr5.1:6052360-6052379 | None:intergenic | 40.0% | |
| CATATGCAGAAGCTAGCAAT+GGG | + | chr5.1:6053137-6053156 | None:intergenic | 40.0% | |
| CATGGTTATCTTTGTAGCAG+TGG | - | chr5.1:6053913-6053932 | MS.gene21220:intron | 40.0% | |
| CGGTAAGAAGTTAGCTACTT+AGG | - | chr5.1:6052162-6052181 | MS.gene21220:intron | 40.0% | |
| CTAAATCAACCGAGAGTTCT+TGG | + | chr5.1:6054938-6054957 | None:intergenic | 40.0% | |
| CTAAGTTGTATGAAGAGGCT+TGG | - | chr5.1:6055701-6055720 | MS.gene21220:CDS | 40.0% | |
| CTATTTGTATGCGGGATAAC+TGG | - | chr5.1:6053700-6053719 | MS.gene21220:CDS | 40.0% | |
| CTTCAATTCCATCCTGTGAA+TGG | + | chr5.1:6053870-6053889 | None:intergenic | 40.0% | |
| GAAAGAGGGAATTCATTCAC+CGG | + | chr5.1:6049324-6049343 | None:intergenic | 40.0% | |
| GAACGAGATGAAGATCGTTT+GGG | - | chr5.1:6049239-6049258 | MS.gene21220:CDS | 40.0% | |
| GAAGAATGCCGTAAACTATG+TGG | - | chr5.1:6053886-6053905 | MS.gene21220:intron | 40.0% | |
| GATTCACACTAACTAAGGAG+AGG | + | chr5.1:6049614-6049633 | None:intergenic | 40.0% | |
| GGAACAACTGAATCGTTCAA+AGG | + | chr5.1:6055733-6055752 | None:intergenic | 40.0% | |
| GGCATAAACAATAGCATGTG+TGG | + | chr5.1:6051557-6051576 | None:intergenic | 40.0% | |
| GGTGACATATCCGAGAAAAA+CGG | + | chr5.1:6049437-6049456 | None:intergenic | 40.0% | |
| GGTGCAAGTATATTGCTTGT+TGG | - | chr5.1:6052738-6052757 | MS.gene21220:intron | 40.0% | |
| GTCATGGATCCAATGTTCAA+GGG | - | chr5.1:6051235-6051254 | MS.gene21220:intron | 40.0% | |
| GTTAGGTTTCCAAGAACTCT+CGG | - | chr5.1:6054926-6054945 | MS.gene21220:intron | 40.0% | |
| GTTGTTGTCGGTAACATTTG+TGG | + | chr5.1:6053399-6053418 | None:intergenic | 40.0% | |
| TAACCACTAGGCAATGTATG+TGG | - | chr5.1:6051987-6052006 | MS.gene21220:intron | 40.0% | |
| TAACTCCTTTCTATCAAGCG+AGG | + | chr5.1:6050767-6050786 | None:intergenic | 40.0% | |
| TAAGGCACAAAAATGTGCTG+AGG | + | chr5.1:6054141-6054160 | None:intergenic | 40.0% | |
| TCACATTACACCTTCTGGAT+TGG | - | chr5.1:6049688-6049707 | MS.gene21220:intron | 40.0% | |
| TCCAGCAAAGTGAGTGAAAT+GGG | - | chr5.1:6051324-6051343 | MS.gene21220:intron | 40.0% | |
| TCTTCAAGTGAATACCGGTA+GGG | - | chr5.1:6052075-6052094 | MS.gene21220:intron | 40.0% | |
| TGAACGAGATGAAGATCGTT+TGG | - | chr5.1:6049238-6049257 | MS.gene21220:CDS | 40.0% | |
| TGAAGAACACGTATGTGACA+TGG | + | chr5.1:6053804-6053823 | None:intergenic | 40.0% | |
| TGATCCTTGTTCTTCAGTGA+TGG | + | chr5.1:6055460-6055479 | None:intergenic | 40.0% | |
| TGTGGAATCTCACTAAAGGA+TGG | + | chr5.1:6053381-6053400 | None:intergenic | 40.0% | |
| TGTTGGTACCACAGCTTATT+TGG | - | chr5.1:6054289-6054308 | MS.gene21220:intron | 40.0% | |
| TTCCAGCAAAGTGAGTGAAA+TGG | - | chr5.1:6051323-6051342 | MS.gene21220:intron | 40.0% | |
| TTGCAATTCTTGTAGCAGGA+AGG | - | chr5.1:6052949-6052968 | MS.gene21220:intron | 40.0% | |
| TTGTTAGTGAGTGGCTGAAA+TGG | - | chr5.1:6053166-6053185 | MS.gene21220:CDS | 40.0% | |
| ! | AAATCTAGCCTTTCAAGAGG+GGG | + | chr5.1:6050459-6050478 | None:intergenic | 40.0% |
| ! | ACTCTCGGTTGATTTAGTTG+AGG | - | chr5.1:6054941-6054960 | MS.gene21220:intron | 40.0% |
| ! | CGTCTTAATGGTGAGTCTTT+TGG | - | chr5.1:6050841-6050860 | MS.gene21220:intron | 40.0% |
| ! | TATGCCCGTCTTATTACTGA+AGG | - | chr5.1:6051571-6051590 | MS.gene21220:intron | 40.0% |
| ! | TATTAACGGCCCGTTTGTTA+CGG | + | chr5.1:6050073-6050092 | None:intergenic | 40.0% |
| ! | TCATTTCTAGGCATTCCGAA+AGG | - | chr5.1:6050732-6050751 | MS.gene21220:CDS | 40.0% |
| ! | TGCATTGACAAGTGCAATCA+GGG | - | chr5.1:6051415-6051434 | MS.gene21220:intron | 40.0% |
| !! | CTGCTTTTACGGATCTTCAT+TGG | - | chr5.1:6051019-6051038 | MS.gene21220:CDS | 40.0% |
| !! | TGATTTTTCAACATTGCCCG+AGG | - | chr5.1:6053224-6053243 | MS.gene21220:CDS | 40.0% |
| !! | TGTAGATGAGCCTGCTTTTA+CGG | - | chr5.1:6051008-6051027 | MS.gene21220:CDS | 40.0% |
| !! | TGTTTCTAGCCCTTGAACAT+TGG | + | chr5.1:6051247-6051266 | None:intergenic | 40.0% |
| !!! | CAATACTGTGCTGCTTTTAC+AGG | - | chr5.1:6053987-6054006 | MS.gene21220:CDS | 40.0% |
| AACAGTAGTGCGCTTGAAGA+CGG | - | chr5.1:6055218-6055237 | MS.gene21220:intron | 45.0% | |
| AACGATTCAGTTGTTCCGGA+TGG | - | chr5.1:6055736-6055755 | MS.gene21220:CDS | 45.0% | |
| AAGGTTTCATTGTCCAGCTG+CGG | - | chr5.1:6051690-6051709 | MS.gene21220:intron | 45.0% | |
| AAGTTGCAGCAGGATATTCC+TGG | - | chr5.1:6055342-6055361 | MS.gene21220:intron | 45.0% | |
| ACCCATTTCACTCACTTTGC+TGG | + | chr5.1:6051328-6051347 | None:intergenic | 45.0% | |
| ACCGGTAGGGGGAATATTTA+AGG | - | chr5.1:6052088-6052107 | MS.gene21220:intron | 45.0% | |
| AGCAGTTGCAGAAGTAGTCA+AGG | + | chr5.1:6053277-6053296 | None:intergenic | 45.0% | |
| AGGGAATTCATTCACCGGAT+CGG | + | chr5.1:6049319-6049338 | None:intergenic | 45.0% | |
| ATCATCGAGCTCCGTCTTAA+TGG | - | chr5.1:6050829-6050848 | MS.gene21220:intron | 45.0% | |
| ATCCATGACCAAGTTCGGTT+TGG | + | chr5.1:6051224-6051243 | None:intergenic | 45.0% | |
| ATGCAATCATGAAGCTCACG+AGG | + | chr5.1:6055064-6055083 | None:intergenic | 45.0% | |
| CAAGTTCTCTAATCCCGAAG+AGG | - | chr5.1:6054558-6054577 | MS.gene21220:intron | 45.0% | |
| CAATTGTCTCCCGAAAGAAC+AGG | - | chr5.1:6055105-6055124 | MS.gene21220:intron | 45.0% | |
| CACTGATCACTTGCTTGGTT+CGG | - | chr5.1:6055648-6055667 | MS.gene21220:intron | 45.0% | |
| CACTTGCGAATGAGCAATTG+AGG | - | chr5.1:6055478-6055497 | MS.gene21220:intron | 45.0% | |
| CACTTTGCTGGAAGTCAATG+TGG | + | chr5.1:6051316-6051335 | None:intergenic | 45.0% | |
| CAGAACCTCGCTTGATAGAA+AGG | - | chr5.1:6050759-6050778 | MS.gene21220:intron | 45.0% | |
| CAGCAGGATATTCCTGGAAA+GGG | - | chr5.1:6055348-6055367 | MS.gene21220:intron | 45.0% | |
| CAGTTTGGATCTCAAAAGGG+AGG | - | chr5.1:6052683-6052702 | MS.gene21220:intron | 45.0% | |
| CATGACCGCCACATAGTTTA+CGG | + | chr5.1:6053897-6053916 | None:intergenic | 45.0% | |
| CCAACAGTTATACCTGGAAG+AGG | + | chr5.1:6051734-6051753 | None:intergenic | 45.0% | |
| CCTCTTCCAGGTATAACTGT+TGG | - | chr5.1:6051731-6051750 | MS.gene21220:CDS | 45.0% | |
| CTCTTCGGGATTAGAGAACT+TGG | + | chr5.1:6054560-6054579 | None:intergenic | 45.0% | |
| CTTACCGCTGTAAGAGAAGT+AGG | + | chr5.1:6052149-6052168 | None:intergenic | 45.0% | |
| CTTCAAGTGAATACCGGTAG+GGG | - | chr5.1:6052076-6052095 | MS.gene21220:intron | 45.0% | |
| CTTTGCTGGAAGTCAATGTG+GGG | + | chr5.1:6051314-6051333 | None:intergenic | 45.0% | |
| GAATGCCGTAAACTATGTGG+CGG | - | chr5.1:6053889-6053908 | MS.gene21220:intron | 45.0% | |
| GACGGTTGAGAAAAGCAAAC+AGG | - | chr5.1:6052315-6052334 | MS.gene21220:CDS | 45.0% | |
| GATTCCTTGGAATTCGTACG+TGG | + | chr5.1:6051823-6051842 | None:intergenic | 45.0% | |
| GCATATGCAGAAGCTAGCAA+TGG | + | chr5.1:6053138-6053157 | None:intergenic | 45.0% | |
| GCATTAGTGCTGCATGCATT+TGG | - | chr5.1:6050863-6050882 | MS.gene21220:intron | 45.0% | |
| GCGAGGTTCTGTTATCCTTT+CGG | + | chr5.1:6050750-6050769 | None:intergenic | 45.0% | |
| GGAACCTACTTCTCTTACAG+CGG | - | chr5.1:6052142-6052161 | MS.gene21220:intron | 45.0% | |
| GGTCATGGATCCAATGTTCA+AGG | - | chr5.1:6051234-6051253 | MS.gene21220:intron | 45.0% | |
| TAAGGGAGGAGAGTTGTTGT+CGG | + | chr5.1:6053411-6053430 | None:intergenic | 45.0% | |
| TCAATCTACCAGGGTTTCAC+AGG | - | chr5.1:6052508-6052527 | MS.gene21220:intron | 45.0% | |
| TCCATGACCAAGTTCGGTTT+GGG | + | chr5.1:6051223-6051242 | None:intergenic | 45.0% | |
| TCGGTTCTTGGACGATATGA+TGG | - | chr5.1:6055667-6055686 | MS.gene21220:intron | 45.0% | |
| TCTTCGAACAGCACTGTATC+TGG | + | chr5.1:6052663-6052682 | None:intergenic | 45.0% | |
| TCTTGTAGCAGGAAGGTTGA+TGG | - | chr5.1:6052956-6052975 | MS.gene21220:intron | 45.0% | |
| TTCAAGTGAATACCGGTAGG+GGG | - | chr5.1:6052077-6052096 | MS.gene21220:intron | 45.0% | |
| TTGACCACGTACGAATTCCA+AGG | - | chr5.1:6051816-6051835 | MS.gene21220:CDS | 45.0% | |
| ! | AATCTAGCCTTTCAAGAGGG+GGG | + | chr5.1:6050458-6050477 | None:intergenic | 45.0% |
| ! | ACTATTTCTCAGTTGGGCTC+TGG | - | chr5.1:6054257-6054276 | MS.gene21220:intron | 45.0% |
| ! | AGTGCTGTTCGAAGACAGTT+TGG | - | chr5.1:6052668-6052687 | MS.gene21220:intron | 45.0% |
| ! | CTTGTAGCAGGAAGGTTGAT+GGG | - | chr5.1:6052957-6052976 | MS.gene21220:intron | 45.0% |
| ! | GACGTGTTATTGGTGACCAT+AGG | - | chr5.1:6054652-6054671 | MS.gene21220:intron | 45.0% |
| ! | GATATTTTACCCAACCCACC+AGG | + | chr5.1:6051535-6051554 | None:intergenic | 45.0% |
| ! | GATTTAAAACAGTGGTGGCC+TGG | - | chr5.1:6051514-6051533 | MS.gene21220:intron | 45.0% |
| ! | GTGCATTGACAAGTGCAATC+AGG | - | chr5.1:6051414-6051433 | MS.gene21220:intron | 45.0% |
| ! | GTGGCTGAAATGGCTTTACA+CGG | - | chr5.1:6053176-6053195 | MS.gene21220:CDS | 45.0% |
| ! | GTTCCTTGTCCTTTGATAGC+AGG | + | chr5.1:6051138-6051157 | None:intergenic | 45.0% |
| ! | TGTCATTTGTGCAACACGGT+TGG | - | chr5.1:6054870-6054889 | MS.gene21220:intron | 45.0% |
| !! | AGGTTGGTGAGACTAGAGAA+AGG | + | chr5.1:6051882-6051901 | None:intergenic | 45.0% |
| !! | ATCACTCTGTTGTGATGGGT+GGG | - | chr5.1:6052371-6052390 | MS.gene21220:CDS | 45.0% |
| !!! | AATATTTTAATTGTAATTTT+GGG | + | chr5.1:6052847-6052866 | None:intergenic | 5.0% |
| !!! | TAATATTTTAATTGTAATTT+TGG | + | chr5.1:6052848-6052867 | None:intergenic | 5.0% |
| ACAAGGAACTGATGAGCAGC+AGG | - | chr5.1:6051149-6051168 | MS.gene21220:intron | 50.0% | |
| CACCCACATACATTGCCTAG+TGG | + | chr5.1:6051993-6052012 | None:intergenic | 50.0% | |
| CACTCGAGCCAAATAAGCTG+TGG | + | chr5.1:6054300-6054319 | None:intergenic | 50.0% | |
| CGTAAACTATGTGGCGGTCA+TGG | - | chr5.1:6053895-6053914 | MS.gene21220:intron | 50.0% | |
| CTCACGAGGATAGCAATCAC+CGG | + | chr5.1:6055050-6055069 | None:intergenic | 50.0% | |
| CTGATGAGCAGCAGGAAAAG+TGG | - | chr5.1:6051157-6051176 | MS.gene21220:intron | 50.0% | |
| GAGATGAAGATCGTTTGGGC+TGG | - | chr5.1:6049243-6049262 | MS.gene21220:CDS | 50.0% | |
| GATGATCACTTGCCTCTTCC+AGG | - | chr5.1:6051719-6051738 | MS.gene21220:CDS | 50.0% | |
| GCAGCAGGATATTCCTGGAA+AGG | - | chr5.1:6055347-6055366 | MS.gene21220:intron | 50.0% | |
| GGCTCCATCACTGAAGAACA+AGG | - | chr5.1:6055453-6055472 | MS.gene21220:intron | 50.0% | |
| GTGCCTGCTATCAAAGGACA+AGG | - | chr5.1:6051132-6051151 | MS.gene21220:intron | 50.0% | |
| GTTCCTGCCTGCACATATGA+AGG | - | chr5.1:6053961-6053980 | MS.gene21220:CDS | 50.0% | |
| GTTTCACAGGTCACCAGAGA+AGG | - | chr5.1:6052521-6052540 | MS.gene21220:intron | 50.0% | |
| TAAAACAGTGGTGGCCTGGT+GGG | - | chr5.1:6051518-6051537 | MS.gene21220:intron | 50.0% | |
| TCTCCTTCATATGTGCAGGC+AGG | + | chr5.1:6053967-6053986 | None:intergenic | 50.0% | |
| TGCTATGCCCAAACCGAACT+TGG | - | chr5.1:6051213-6051232 | MS.gene21220:intron | 50.0% | |
| TTAAAACAGTGGTGGCCTGG+TGG | - | chr5.1:6051517-6051536 | MS.gene21220:intron | 50.0% | |
| TTACCGCAGTCCTAACCACT+AGG | - | chr5.1:6051975-6051994 | MS.gene21220:intron | 50.0% | |
| TTGCCTAGTGGTTAGGACTG+CGG | + | chr5.1:6051981-6052000 | None:intergenic | 50.0% | |
| TTGTATGCGGGATAACTGGC+TGG | - | chr5.1:6053704-6053723 | MS.gene21220:CDS | 50.0% | |
| ! | CACAGCTTATTTGGCTCGAG+TGG | - | chr5.1:6054298-6054317 | MS.gene21220:intron | 50.0% |
| ! | CATCACTCTGTTGTGATGGG+TGG | - | chr5.1:6052370-6052389 | MS.gene21220:CDS | 50.0% |
| ! | CTGGGCGATTTTCTTTCCAC+TGG | - | chr5.1:6055432-6055451 | MS.gene21220:intron | 50.0% |
| ! | TCGTCTTGTTGCTTCCGATC+CGG | - | chr5.1:6049302-6049321 | MS.gene21220:CDS | 50.0% |
| ! | TTCTTCAGTGATGGAGCCAG+TGG | + | chr5.1:6055451-6055470 | None:intergenic | 50.0% |
| !! | CACTTGCTTGGTTCGGTTCT+TGG | - | chr5.1:6055655-6055674 | MS.gene21220:intron | 50.0% |
| !! | GGCTCTGGAAAGAAACCTGT+TGG | - | chr5.1:6054272-6054291 | MS.gene21220:intron | 50.0% |
| !! | TCACTCTGTTGTGATGGGTG+GGG | - | chr5.1:6052372-6052391 | MS.gene21220:CDS | 50.0% |
| !! | TGCTGTTTCACTCCCTTTCC+AGG | + | chr5.1:6055363-6055382 | None:intergenic | 50.0% |
| AAAGGGAGGGCCTGAAACAC+AGG | - | chr5.1:6052697-6052716 | MS.gene21220:intron | 55.0% | |
| AAGGTCTCCCCCCTCTTGAA+AGG | - | chr5.1:6050448-6050467 | MS.gene21220:CDS | 55.0% | |
| AGCAACAGCGACAGACATCC+TGG | + | chr5.1:6054527-6054546 | None:intergenic | 55.0% | |
| CAACCCTGCAGTGCAAGCAT+GGG | + | chr5.1:6053250-6053269 | None:intergenic | 55.0% | |
| GCCCAAACCGAACTTGGTCA+TGG | - | chr5.1:6051219-6051238 | MS.gene21220:intron | 55.0% | |
| GGCAGTTACCATGCACTCCT+TGG | + | chr5.1:6051603-6051622 | None:intergenic | 55.0% | |
| TCAACCCTGCAGTGCAAGCA+TGG | + | chr5.1:6053251-6053270 | None:intergenic | 55.0% | |
| TCTGGTGACCTGTGAAACCC+TGG | + | chr5.1:6052519-6052538 | None:intergenic | 55.0% | |
| ! | AGCTTTTAGACGCGCCCACA+TGG | + | chr5.1:6054091-6054110 | None:intergenic | 55.0% |
| ! | CATTTGAAGCTAGGGCTGCC+AGG | - | chr5.1:6054506-6054525 | MS.gene21220:intron | 55.0% |
| ! | GGTCAAGACCAAGGAGTGCA+TGG | - | chr5.1:6051592-6051611 | MS.gene21220:intron | 55.0% |
| !! | CACTCTGTTGTGATGGGTGG+GGG | - | chr5.1:6052373-6052392 | MS.gene21220:CDS | 55.0% |
| AGGCCCATGCTTGCACTGCA+GGG | - | chr5.1:6053244-6053263 | MS.gene21220:CDS | 60.0% | |
| CATTGTCCAGCTGCGGAGCT+TGG | - | chr5.1:6051697-6051716 | MS.gene21220:intron | 60.0% | |
| GATCATCCAAGCTCCGCAGC+TGG | + | chr5.1:6051706-6051725 | None:intergenic | 60.0% | |
| TGCAGTGCAAGCATGGGCCT+CGG | + | chr5.1:6053244-6053263 | None:intergenic | 60.0% | |
| GAGGCCCATGCTTGCACTGC+AGG | - | chr5.1:6053243-6053262 | MS.gene21220:CDS | 65.0% | |
| GCAGTGCAAGCATGGGCCTC+GGG | + | chr5.1:6053243-6053262 | None:intergenic | 65.0% | |
| ! | ACAGTGGTGGCCTGGTGGGT+TGG | - | chr5.1:6051522-6051541 | MS.gene21220:intron | 65.0% |
| !! | CAGTGGTGGCCTGGTGGGTT+GGG | - | chr5.1:6051523-6051542 | MS.gene21220:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 6049186 | 6055816 | 6049186 | ID=MS.gene21220 |
| chr5.1 | mRNA | 6049186 | 6055816 | 6049186 | ID=MS.gene21220.t1;Parent=MS.gene21220 |
| chr5.1 | exon | 6055679 | 6055816 | 6055679 | ID=MS.gene21220.t1.exon1;Parent=MS.gene21220.t1 |
| chr5.1 | CDS | 6055679 | 6055816 | 6055679 | ID=cds.MS.gene21220.t1;Parent=MS.gene21220.t1 |
| chr5.1 | exon | 6054152 | 6054260 | 6054152 | ID=MS.gene21220.t1.exon2;Parent=MS.gene21220.t1 |
| chr5.1 | CDS | 6054152 | 6054260 | 6054152 | ID=cds.MS.gene21220.t1;Parent=MS.gene21220.t1 |
| chr5.1 | exon | 6053961 | 6054022 | 6053961 | ID=MS.gene21220.t1.exon3;Parent=MS.gene21220.t1 |
| chr5.1 | CDS | 6053961 | 6054022 | 6053961 | ID=cds.MS.gene21220.t1;Parent=MS.gene21220.t1 |
| chr5.1 | exon | 6053670 | 6053879 | 6053670 | ID=MS.gene21220.t1.exon4;Parent=MS.gene21220.t1 |
| chr5.1 | CDS | 6053670 | 6053879 | 6053670 | ID=cds.MS.gene21220.t1;Parent=MS.gene21220.t1 |
| chr5.1 | exon | 6053389 | 6053476 | 6053389 | ID=MS.gene21220.t1.exon5;Parent=MS.gene21220.t1 |
| chr5.1 | CDS | 6053389 | 6053476 | 6053389 | ID=cds.MS.gene21220.t1;Parent=MS.gene21220.t1 |
| chr5.1 | exon | 6053147 | 6053309 | 6053147 | ID=MS.gene21220.t1.exon6;Parent=MS.gene21220.t1 |
| chr5.1 | CDS | 6053147 | 6053309 | 6053147 | ID=cds.MS.gene21220.t1;Parent=MS.gene21220.t1 |
| chr5.1 | exon | 6052284 | 6052482 | 6052284 | ID=MS.gene21220.t1.exon7;Parent=MS.gene21220.t1 |
| chr5.1 | CDS | 6052284 | 6052482 | 6052284 | ID=cds.MS.gene21220.t1;Parent=MS.gene21220.t1 |
| chr5.1 | exon | 6051706 | 6051903 | 6051706 | ID=MS.gene21220.t1.exon8;Parent=MS.gene21220.t1 |
| chr5.1 | CDS | 6051706 | 6051903 | 6051706 | ID=cds.MS.gene21220.t1;Parent=MS.gene21220.t1 |
| chr5.1 | exon | 6050994 | 6051125 | 6050994 | ID=MS.gene21220.t1.exon9;Parent=MS.gene21220.t1 |
| chr5.1 | CDS | 6050994 | 6051125 | 6050994 | ID=cds.MS.gene21220.t1;Parent=MS.gene21220.t1 |
| chr5.1 | exon | 6050646 | 6050766 | 6050646 | ID=MS.gene21220.t1.exon10;Parent=MS.gene21220.t1 |
| chr5.1 | CDS | 6050646 | 6050766 | 6050646 | ID=cds.MS.gene21220.t1;Parent=MS.gene21220.t1 |
| chr5.1 | exon | 6050422 | 6050532 | 6050422 | ID=MS.gene21220.t1.exon11;Parent=MS.gene21220.t1 |
| chr5.1 | CDS | 6050422 | 6050532 | 6050422 | ID=cds.MS.gene21220.t1;Parent=MS.gene21220.t1 |
| chr5.1 | exon | 6050002 | 6050071 | 6050002 | ID=MS.gene21220.t1.exon12;Parent=MS.gene21220.t1 |
| chr5.1 | CDS | 6050002 | 6050071 | 6050002 | ID=cds.MS.gene21220.t1;Parent=MS.gene21220.t1 |
| chr5.1 | exon | 6049487 | 6049670 | 6049487 | ID=MS.gene21220.t1.exon13;Parent=MS.gene21220.t1 |
| chr5.1 | CDS | 6049487 | 6049670 | 6049487 | ID=cds.MS.gene21220.t1;Parent=MS.gene21220.t1 |
| chr5.1 | exon | 6049186 | 6049395 | 6049186 | ID=MS.gene21220.t1.exon14;Parent=MS.gene21220.t1 |
| chr5.1 | CDS | 6049186 | 6049395 | 6049186 | ID=cds.MS.gene21220.t1;Parent=MS.gene21220.t1 |
| Gene Sequence |
| Protein sequence |
