Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031837.t1 | RHN61635.1 | 89.6 | 1360 | 141 | 0 | 1 | 1360 | 1 | 1360 | 7.50E-212 | 748 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031837.t1 | A0A396ID41 | 89.6 | 1360 | 141 | 0 | 1 | 1360 | 1 | 1360 | 5.4e-212 | 748.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031837 | MS.gene061924 | PPI |
| MS.gene45415 | MS.gene031837 | PPI |
| MS.gene24596 | MS.gene031837 | PPI |
| MS.gene09818 | MS.gene031837 | PPI |
| MS.gene031837 | MS.gene90953 | PPI |
| MS.gene031837 | MS.gene62509 | PPI |
| MS.gene031837 | MS.gene029842 | PPI |
| MS.gene74439 | MS.gene031837 | PPI |
| MS.gene52098 | MS.gene031837 | PPI |
| MS.gene018527 | MS.gene031837 | PPI |
| MS.gene031837 | MS.gene074085 | PPI |
| MS.gene79182 | MS.gene031837 | PPI |
| MS.gene057731 | MS.gene031837 | PPI |
| MS.gene040402 | MS.gene031837 | PPI |
| MS.gene031837 | MS.gene003500 | PPI |
| MS.gene22490 | MS.gene031837 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031837.t1 | MTR_4g076030 | 91.844 | 1361 | 71 | 3 | 1 | 1360 | 1 | 1322 | 0.0 | 2248 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene031837.t1 | AT2G32240 | 47.657 | 1387 | 645 | 14 | 1 | 1360 | 1 | 1333 | 0.0 | 900 |
| MS.gene031837.t1 | AT1G05320 | 33.135 | 842 | 338 | 17 | 529 | 1360 | 164 | 790 | 4.18e-75 | 267 |
| MS.gene031837.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 5.56e-11 | 67.8 |
| MS.gene031837.t1 | AT1G05320 | 33.135 | 842 | 338 | 17 | 529 | 1360 | 164 | 790 | 4.18e-75 | 267 |
| MS.gene031837.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 5.56e-11 | 67.8 |
| MS.gene031837.t1 | AT1G05320 | 33.135 | 842 | 338 | 17 | 529 | 1360 | 164 | 790 | 4.18e-75 | 267 |
| MS.gene031837.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 5.56e-11 | 67.8 |
| MS.gene031837.t1 | AT1G05320 | 33.135 | 842 | 338 | 17 | 529 | 1360 | 164 | 790 | 4.18e-75 | 267 |
| MS.gene031837.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 5.56e-11 | 67.8 |
| MS.gene031837.t1 | AT1G05320 | 33.135 | 842 | 338 | 17 | 529 | 1360 | 164 | 790 | 4.18e-75 | 267 |
| MS.gene031837.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 5.56e-11 | 67.8 |
| MS.gene031837.t1 | AT1G05320 | 33.135 | 842 | 338 | 17 | 529 | 1360 | 164 | 790 | 4.18e-75 | 267 |
| MS.gene031837.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 5.56e-11 | 67.8 |
| MS.gene031837.t1 | AT1G05320 | 33.135 | 842 | 338 | 17 | 529 | 1360 | 164 | 790 | 4.18e-75 | 267 |
| MS.gene031837.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 5.56e-11 | 67.8 |
| MS.gene031837.t1 | AT1G05320 | 30.835 | 707 | 274 | 13 | 529 | 1228 | 164 | 662 | 2.58e-49 | 187 |
| MS.gene031837.t1 | AT1G05320 | 27.836 | 758 | 361 | 16 | 538 | 1278 | 72 | 660 | 3.73e-25 | 113 |
| MS.gene031837.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 5.33e-11 | 67.8 |
| MS.gene031837.t1 | AT1G05320 | 30.835 | 707 | 274 | 13 | 529 | 1228 | 164 | 662 | 2.58e-49 | 187 |
| MS.gene031837.t1 | AT1G05320 | 27.836 | 758 | 361 | 16 | 538 | 1278 | 72 | 660 | 3.73e-25 | 113 |
| MS.gene031837.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 5.33e-11 | 67.8 |
Find 163 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTAATGCAAAACACTTTA+AGG | 0.134026 | 4.3:+32258204 | MS.gene031837:CDS |
| CTCCAATTGTGAATTCTTCT+TGG | 0.153436 | 4.3:-32258707 | None:intergenic |
| GCTTGAGAAAATCAAGATTT+TGG | 0.154559 | 4.3:+32259452 | MS.gene031837:CDS |
| GACATTGTCAAGATGTTTAT+TGG | 0.168100 | 4.3:-32258968 | None:intergenic |
| TGACTCTAAATCACTCAATT+TGG | 0.208796 | 4.3:-32260129 | None:intergenic |
| CAGCTTCTCATTCAATTCTT+TGG | 0.225739 | 4.3:-32259883 | None:intergenic |
| ACCTTTGTCACTGGAACTTC+TGG | 0.227157 | 4.3:-32256546 | None:intergenic |
| ACTCTCCAAAACACAGTTAT+TGG | 0.250461 | 4.3:+32257859 | MS.gene031837:CDS |
| CTTCCTTTGTAGAGACAAAT+AGG | 0.260048 | 4.3:-32257997 | None:intergenic |
| AACTTCCAATAACTGTGTTT+TGG | 0.260483 | 4.3:-32257864 | None:intergenic |
| AATCTTTATCTGTCCTTCTA+AGG | 0.265446 | 4.3:-32259910 | None:intergenic |
| GTTCTTCTAGAGAATTCTTC+AGG | 0.272845 | 4.3:-32261115 | None:intergenic |
| TAGCTCTATTTCACTTTCAT+TGG | 0.293235 | 4.3:-32259061 | None:intergenic |
| CTCCTGAAGTTCATCAATCT+TGG | 0.299260 | 4.3:-32259667 | None:intergenic |
| TCGGCTGCGCTCATTGTTCA+TGG | 0.309471 | 4.3:-32258782 | None:intergenic |
| ATTATCTTCGGCATCATTCT+TGG | 0.315954 | 4.3:+32261569 | MS.gene031837:CDS |
| CTGTTCAAGCTCTGAATTGT+TGG | 0.317550 | 4.3:-32258311 | None:intergenic |
| GGAGTTGTGTAGTGATTTAG+AGG | 0.324329 | 4.3:+32258225 | MS.gene031837:CDS |
| TGAACAGAAGGTGAAGTCTT+TGG | 0.324411 | 4.3:+32258327 | MS.gene031837:CDS |
| AACCAAGATTGATGAACTTC+AGG | 0.355735 | 4.3:+32259665 | MS.gene031837:CDS |
| TGAAGATAGTTTGAGCAAAC+TGG | 0.358673 | 4.3:+32259527 | MS.gene031837:CDS |
| AACAGTGGCTGCAACGGTTC+CGG | 0.359933 | 4.3:-32258368 | None:intergenic |
| AAAGAGAAATTAGAAGAAAC+TGG | 0.365005 | 4.3:+32257353 | MS.gene031837:CDS |
| CTGATTTGATATGAGAGCTC+TGG | 0.369639 | 4.3:-32258822 | None:intergenic |
| TTTGCAGGTTGGAAGTGTTC+AGG | 0.372826 | 4.3:+32260772 | MS.gene031837:intron |
| CATCCCTCACAATTTCCAAT+AGG | 0.377955 | 4.3:-32259173 | None:intergenic |
| TTCCTCGTCTTTCTTTGCTT+CGG | 0.378939 | 4.3:-32257108 | None:intergenic |
| TTGAAGCACAAGAGAAGGTT+CGG | 0.381149 | 4.3:+32257240 | MS.gene031837:CDS |
| AACAGAGAAATACAGAATTC+AGG | 0.386994 | 4.3:+32258888 | MS.gene031837:CDS |
| TCAGAAAGATGAAAGCATTA+AGG | 0.387510 | 4.3:+32256584 | MS.gene031837:CDS |
| ATGAATTTCAAGTTCATCCT+TGG | 0.388092 | 4.3:+32261530 | MS.gene031837:CDS |
| TCTTCTTAATAGCCTATTGC+AGG | 0.390574 | 4.3:+32258636 | MS.gene031837:CDS |
| GCTCCTTCAACTTCTCTTCA+AGG | 0.391948 | 4.3:-32260492 | None:intergenic |
| TTCAAGGATGCGAGCTTCAT+TGG | 0.397888 | 4.3:-32259805 | None:intergenic |
| TATCCATGTGCTCCTGCAAT+AGG | 0.401274 | 4.3:-32258648 | None:intergenic |
| TTCATTGGCAGAATGAGTTT+CGG | 0.401937 | 4.3:-32259790 | None:intergenic |
| TGCTGATAAGAAAGATGCTT+TGG | 0.407101 | 4.3:+32261373 | MS.gene031837:CDS |
| TTCTCTGAAGGAAGAATTGA+AGG | 0.417486 | 4.3:+32257745 | MS.gene031837:CDS |
| TGCTGAGTCAGAAAACCTAT+TGG | 0.417564 | 4.3:+32259158 | MS.gene031837:CDS |
| ATCCAAGAAGAATTCACAAT+TGG | 0.425360 | 4.3:+32258705 | MS.gene031837:CDS |
| TAAGCAGAAAGAGCTTCTTC+AGG | 0.430704 | 4.3:+32257496 | MS.gene031837:CDS |
| GGATCAAATCTTCTAGTTCT+CGG | 0.433255 | 4.3:-32258801 | None:intergenic |
| CTTTCGCAGGTTTAATTCCT+CGG | 0.435688 | 4.3:-32257930 | None:intergenic |
| CTTCAGGTGAAGGAAGCGTT+TGG | 0.438245 | 4.3:+32257512 | MS.gene031837:CDS |
| GAGAAGCTGAATACCTTAGA+AGG | 0.440315 | 4.3:+32259897 | MS.gene031837:CDS |
| GAAGATCTTCATAGTGAATC+CGG | 0.442202 | 4.3:+32258349 | MS.gene031837:CDS |
| CGAAGTTACATTGAAGAGTC+AGG | 0.445795 | 4.3:+32258096 | MS.gene031837:CDS |
| GATAAAGATTTACGAAGAAC+AGG | 0.446009 | 4.3:+32259923 | MS.gene031837:CDS |
| AGGAGCAGAATCTCAGAAGT+TGG | 0.446189 | 4.3:+32261079 | MS.gene031837:CDS |
| TGACCTTGAAGAGAAGTTGA+AGG | 0.447342 | 4.3:+32260489 | MS.gene031837:CDS |
| TTGAAGAAAATCTTGCTGTA+AGG | 0.447582 | 4.3:+32259292 | MS.gene031837:CDS |
| CAAAGAAGTCTTGAGCTTGA+AGG | 0.448234 | 4.3:+32258394 | MS.gene031837:CDS |
| TTATCTTCGGCATCATTCTT+GGG | 0.450792 | 4.3:+32261570 | MS.gene031837:CDS |
| AGGAAAATATTGCAGGAGCC+GGG | 0.455935 | 4.3:+32259475 | MS.gene031837:CDS |
| AGCTTCTTGGAGCTTCTGTT+CGG | 0.458835 | 4.3:-32259388 | None:intergenic |
| ATGAACTTGAAATTCATGAT+AGG | 0.461531 | 4.3:-32261524 | None:intergenic |
| ATGCTTTGTCACCAAGTCTT+CGG | 0.464198 | 4.3:-32260219 | None:intergenic |
| GTGAAAATGAAGATTTGAAA+AGG | 0.466244 | 4.3:+32259562 | MS.gene031837:CDS |
| TGCTGAAGGAGTTGTCGCTT+CGG | 0.467033 | 4.3:-32261456 | None:intergenic |
| GCTCTTGTATCGATTATCTT+CGG | 0.469158 | 4.3:+32261557 | MS.gene031837:CDS |
| TGCAAAGGTCAAGCTGCAAA+TGG | 0.470134 | 4.3:+32258051 | MS.gene031837:CDS |
| GATTTATTGCAGGAAACAAA+TGG | 0.471001 | 4.3:+32257062 | MS.gene031837:intron |
| AGAAATCTGCATTGCAAAGT+AGG | 0.472811 | 4.3:+32260575 | MS.gene031837:CDS |
| TGTCACTGGAACTTCTGGAA+TGG | 0.476798 | 4.3:-32256541 | None:intergenic |
| CAAGAAGAATTCACAATTGG+AGG | 0.477966 | 4.3:+32258708 | MS.gene031837:CDS |
| GAGCGTGAAACAGAAACTGC+TGG | 0.486300 | 4.3:+32260056 | MS.gene031837:CDS |
| TCTTCGACAACCTTTGTCAC+TGG | 0.486601 | 4.3:-32256555 | None:intergenic |
| TTCTTCTAGAGAATTCTTCA+GGG | 0.493169 | 4.3:-32261114 | None:intergenic |
| GAGGAAAATATTGCAGGAGC+CGG | 0.495511 | 4.3:+32259474 | MS.gene031837:CDS |
| AGAAGAGGCACGGAAGTTTG+AGG | 0.495670 | 4.3:+32257607 | MS.gene031837:CDS |
| TTTGCTTCGGATATTTCCTT+AGG | 0.499629 | 4.3:-32257095 | None:intergenic |
| TGAAGAAAATCTTGCTGTAA+GGG | 0.499819 | 4.3:+32259293 | MS.gene031837:CDS |
| AAAGAATGCTGCCGAAGACT+TGG | 0.501472 | 4.3:+32260208 | MS.gene031837:CDS |
| TACAAATGCAGCTGCAGAAG+AGG | 0.503485 | 4.3:+32258429 | MS.gene031837:CDS |
| CGCTAAATTGAAAGAGGCTG+AGG | 0.504259 | 4.3:+32258603 | MS.gene031837:CDS |
| TGCATTGCAAAGTAGGCTGC+AGG | 0.508198 | 4.3:+32260582 | MS.gene031837:CDS |
| CTCTGCTGCACTTGTCGAGA+AGG | 0.509330 | 4.3:+32260157 | MS.gene031837:CDS |
| TGAAGCACAAGAGAAGGTTC+GGG | 0.511701 | 4.3:+32257241 | MS.gene031837:CDS |
| CCTTGAAAATACACTGCAAA+CGG | 0.519186 | 4.3:+32259038 | MS.gene031837:CDS |
| TAAGATTGCTGAAAATCAAA+AGG | 0.520332 | 4.3:+32257778 | MS.gene031837:CDS |
| GCATCTCATCTCCATCGAAA+AGG | 0.522651 | 4.3:+32261417 | MS.gene031837:CDS |
| TCTGAGAATGAATTACTGGT+TGG | 0.524968 | 4.3:+32259624 | MS.gene031837:CDS |
| CGAGAAGGAAGAGAATGTGT+TGG | 0.526731 | 4.3:+32257163 | MS.gene031837:CDS |
| TATCAACACGCAGATATCTT+CGG | 0.530628 | 4.3:+32260396 | MS.gene031837:intron |
| ATTTCTTGAAGCACAAGAGA+AGG | 0.531871 | 4.3:+32257235 | MS.gene031837:CDS |
| ATCTCAGAAGTTGGAACTAG+AGG | 0.533512 | 4.3:+32261088 | MS.gene031837:CDS |
| CAATTCAGAGCTTGAACAGA+AGG | 0.537146 | 4.3:+32258315 | MS.gene031837:CDS |
| ATTAAACCTGCGAAAGACTT+CGG | 0.538292 | 4.3:+32257937 | MS.gene031837:CDS |
| GCTTCAAGAAATTCTCTGCT+AGG | 0.538939 | 4.3:-32257224 | None:intergenic |
| TGAAGAATCTTTGAAATCTG+AGG | 0.541805 | 4.3:+32260525 | MS.gene031837:CDS |
| TGAAACTCGTAAAGCTGAGC+TGG | 0.545288 | 4.3:+32259968 | MS.gene031837:CDS |
| AGACGAGATGGCTTCTCTGA+AGG | 0.546613 | 4.3:+32257733 | MS.gene031837:CDS |
| TCTCGACGCTAAATTGAAAG+AGG | 0.548418 | 4.3:+32258597 | MS.gene031837:CDS |
| CATGATAGGCGAATCATGGC+CGG | 0.549925 | 4.3:-32261510 | None:intergenic |
| AATTCATGATAGGCGAATCA+TGG | 0.551384 | 4.3:-32261514 | None:intergenic |
| CTAAATTTAGTGCAATTGAA+AGG | 0.554050 | 4.3:+32258526 | MS.gene031837:CDS |
| ACATGAAAACTCTCAGCTGA+AGG | 0.555752 | 4.3:+32257313 | MS.gene031837:CDS |
| TAGCCTATTGCAGGAGCACA+TGG | 0.556000 | 4.3:+32258645 | MS.gene031837:CDS |
| AAATGGAGACTTGTTGCCTA+AGG | 0.556580 | 4.3:+32257079 | MS.gene031837:CDS |
| TTCTGAGTTGGAAAGTGCAA+AGG | 0.558649 | 4.3:+32258036 | MS.gene031837:CDS |
| TGCTGAATCTGAGGGAAACA+AGG | 0.559570 | 4.3:+32257655 | MS.gene031837:CDS |
| GTGTTTCCGAAGTCTTTCGC+AGG | 0.559992 | 4.3:-32257943 | None:intergenic |
| AGAATCTTTAAATGCTGTGA+CGG | 0.560483 | 4.3:+32259086 | MS.gene031837:CDS |
| TTTAATGAATTCTCCATCTG+AGG | 0.560486 | 4.3:-32257138 | None:intergenic |
| AGAGAAGGTTCGGGAACTTG+AGG | 0.561528 | 4.3:+32257250 | MS.gene031837:CDS |
| GAAAGAGCTTCTTCAGGTGA+AGG | 0.561755 | 4.3:+32257502 | MS.gene031837:CDS |
| GACTAATCAGAATCTAAAGA+AGG | 0.563008 | 4.3:+32260447 | MS.gene031837:CDS |
| TTGACTAACAGTGGCTGCAA+CGG | 0.567958 | 4.3:-32258374 | None:intergenic |
| AGAACTTTCTACTATTCAAG+AGG | 0.568023 | 4.3:+32257829 | MS.gene031837:CDS |
| AGAAACTGCTGGAATAAATG+AGG | 0.568461 | 4.3:+32260067 | MS.gene031837:CDS |
| GCAGCTCAGCACTCTTGAAG+AGG | 0.568901 | 4.3:+32257454 | MS.gene031837:CDS |
| AATAAATGTGCTGAATGAAA+AGG | 0.569294 | 4.3:+32260862 | MS.gene031837:CDS |
| GCCGGCTTGAATATGAGTCT+CGG | 0.570313 | 4.3:-32261492 | None:intergenic |
| TCCGAGACTCATATTCAAGC+CGG | 0.571427 | 4.3:+32261491 | MS.gene031837:CDS |
| TCCAGAAGTTCCAGTGACAA+AGG | 0.573505 | 4.3:+32256545 | MS.gene031837:CDS |
| TGGCTCGCATGCTGAATCTG+AGG | 0.574212 | 4.3:+32257646 | MS.gene031837:CDS |
| CGAAAAGAGAGTGAGTGAGT+TGG | 0.577125 | 4.3:+32258852 | MS.gene031837:CDS |
| TGAATCTAGACTACATGAAG+AGG | 0.577959 | 4.3:+32260630 | MS.gene031837:CDS |
| AAACCTATTTGTCTCTACAA+AGG | 0.578347 | 4.3:+32257994 | MS.gene031837:CDS |
| GAGGAAGATAATGCCTCAGA+TGG | 0.578707 | 4.3:+32257125 | MS.gene031837:CDS |
| AGTGCAGACATTGAAGTCAC+AGG | 0.585831 | 4.3:+32260250 | MS.gene031837:CDS |
| CATGAAAACTCTCAGCTGAA+GGG | 0.588485 | 4.3:+32257314 | MS.gene031837:CDS |
| AAAACCTATTGGAAATTGTG+AGG | 0.589441 | 4.3:+32259169 | MS.gene031837:CDS |
| GGAAAATATTGCAGGAGCCG+GGG | 0.592670 | 4.3:+32259476 | MS.gene031837:CDS |
| GAACAGTGTTCTGTCAGAGA+AGG | 0.595509 | 4.3:+32259695 | MS.gene031837:CDS |
| TGATGAGAAAATCTCAGTCA+AGG | 0.597191 | 4.3:+32261211 | MS.gene031837:CDS |
| GAAGAATTCACAATTGGAGG+AGG | 0.597266 | 4.3:+32258711 | MS.gene031837:CDS |
| AATGATGTTGCAGGGTGAGG+AGG | 0.597607 | 4.3:+32261349 | MS.gene031837:intron |
| AGAATTCATTAAAGTCGAGA+AGG | 0.598167 | 4.3:+32257148 | MS.gene031837:CDS |
| AAACCTATTGGAAATTGTGA+GGG | 0.599739 | 4.3:+32259170 | MS.gene031837:CDS |
| GCTGCAACTTTCTACAGAAG+AGG | 0.602865 | 4.3:+32257592 | MS.gene031837:CDS |
| AAGCTCTCGAAAGAAGATGC+AGG | 0.604536 | 4.3:+32257556 | MS.gene031837:CDS |
| GACAAAGGTTGTCGAAGAGG+TGG | 0.604844 | 4.3:+32256560 | MS.gene031837:CDS |
| GCATCTTGAAGCAGTAGTTG+AGG | 0.605915 | 4.3:+32260013 | MS.gene031837:CDS |
| ATTGGCAGAATGAGTTTCGG+AGG | 0.607463 | 4.3:-32259787 | None:intergenic |
| ATATAGAGCTTACTTCTGCA+AGG | 0.608300 | 4.3:+32259322 | MS.gene031837:CDS |
| GGCTCGCATGCTGAATCTGA+GGG | 0.609241 | 4.3:+32257647 | MS.gene031837:CDS |
| GGATGATTTAAATCTTACAC+AGG | 0.610338 | 4.3:+32259191 | MS.gene031837:CDS |
| ACTCAATTTGGACTCATAGA+CGG | 0.610740 | 4.3:-32260117 | None:intergenic |
| GAAAAGCATGGAAGACGAGA+TGG | 0.614305 | 4.3:+32257721 | MS.gene031837:CDS |
| ATGATGTTGCAGGGTGAGGA+GGG | 0.615465 | 4.3:+32261350 | MS.gene031837:intron |
| GATGAAGAAGTTGATGCTGA+AGG | 0.615729 | 4.3:-32261470 | None:intergenic |
| ATTAACGGTTAGATCTTCAA+CGG | 0.617286 | 4.3:-32258188 | None:intergenic |
| ACAGACTACTATAGCTAACC+AGG | 0.618050 | 4.3:+32260916 | MS.gene031837:CDS |
| AGTGACAAAGGTTGTCGAAG+AGG | 0.618117 | 4.3:+32256557 | MS.gene031837:CDS |
| AAGACTTCTTTGACTAACAG+TGG | 0.623952 | 4.3:-32258383 | None:intergenic |
| GAAATTGAGTGCGAAAAGCA+TGG | 0.624539 | 4.3:+32257709 | MS.gene031837:CDS |
| GAAGAAAATCTTGCTGTAAG+GGG | 0.624970 | 4.3:+32259294 | MS.gene031837:CDS |
| AGCGGCAGAGCAAAAGAATG+TGG | 0.626530 | 4.3:+32258489 | MS.gene031837:CDS |
| TCAAGAAATTCTCTGCTAGG+AGG | 0.630636 | 4.3:-32257221 | None:intergenic |
| ATTGCAGAAGCATACTGAGA+AGG | 0.631122 | 4.3:+32259851 | MS.gene031837:CDS |
| CAAAGATATAGACTGTTCCC+CGG | 0.633474 | 4.3:-32259493 | None:intergenic |
| AACTTTCTACAGAAGAGGCA+CGG | 0.647127 | 4.3:+32257597 | MS.gene031837:CDS |
| AAAGGTCAAGCTGCAAATGG+AGG | 0.650695 | 4.3:+32258054 | MS.gene031837:CDS |
| TCGATACAAGAGCTACTCCA+AGG | 0.657381 | 4.3:-32261547 | None:intergenic |
| GAGGAGCTGCATAAGCAAAG+TGG | 0.671411 | 4.3:+32257626 | MS.gene031837:CDS |
| GCTGCGCTCATTGTTCATGG+TGG | 0.678043 | 4.3:-32258779 | None:intergenic |
| TCTCTGAAGGAAGAATTGAA+GGG | 0.679949 | 4.3:+32257746 | MS.gene031837:CDS |
| AAATGTGCTGAATGAAAAGG+TGG | 0.682430 | 4.3:+32260865 | MS.gene031837:CDS |
| TCTAGTAGACGAGTTGACCG+AGG | 0.705814 | 4.3:+32257913 | MS.gene031837:CDS |
| ATCCGAAGCAAAGAAAGACG+AGG | 0.707099 | 4.3:+32257106 | MS.gene031837:CDS |
| GCTTGAAACACGCTTCATAG+CGG | 0.723520 | 4.3:+32258471 | MS.gene031837:CDS |
| TGAATCTGAGGGAAACAAGG+CGG | 0.749133 | 4.3:+32257658 | MS.gene031837:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGGAAAAATAAAGGAATAT+CGG | - | chr4.3:32260284-32260303 | None:intergenic | 20.0% |
| !! | ACATTATTTAACCATTCATT+TGG | - | chr4.3:32257010-32257029 | None:intergenic | 20.0% |
| !! | TTTCTTAAAAAAAAGCAGAA+AGG | + | chr4.3:32261059-32261078 | MS.gene031837:intron | 20.0% |
| !!! | AATTTGAAGTATAAAGTCTT+GGG | - | chr4.3:32256766-32256785 | None:intergenic | 20.0% |
| !!! | ATTGTTTTATGATTTATTGC+AGG | + | chr4.3:32257052-32257071 | MS.gene031837:intron | 20.0% |
| !!! | TGATCATTTTGTATAAACTA+TGG | + | chr4.3:32260344-32260363 | MS.gene031837:intron | 20.0% |
| ! | AAAGAGAAATTAGAAGAAAC+TGG | + | chr4.3:32257353-32257372 | MS.gene031837:CDS | 25.0% |
| ! | AATAAATGTGCTGAATGAAA+AGG | + | chr4.3:32260862-32260881 | MS.gene031837:CDS | 25.0% |
| ! | AGTTGTATTGAGATTATTAG+CGG | + | chr4.3:32256865-32256884 | MS.gene031837:intron | 25.0% |
| ! | ATGAACTTGAAATTCATGAT+AGG | - | chr4.3:32261527-32261546 | None:intergenic | 25.0% |
| ! | CTAAATTTAGTGCAATTGAA+AGG | + | chr4.3:32258526-32258545 | MS.gene031837:CDS | 25.0% |
| ! | GAAGTAGAAAGGAAAAATAA+AGG | - | chr4.3:32260292-32260311 | None:intergenic | 25.0% |
| ! | GTGAAAATGAAGATTTGAAA+AGG | + | chr4.3:32259562-32259581 | MS.gene031837:CDS | 25.0% |
| ! | TAAGATTGCTGAAAATCAAA+AGG | + | chr4.3:32257778-32257797 | MS.gene031837:CDS | 25.0% |
| ! | TGCACACATTATTTATTAAG+AGG | + | chr4.3:32256619-32256638 | MS.gene031837:intron | 25.0% |
| ! | TTACAAAATTATCCGAGATT+TGG | - | chr4.3:32261244-32261263 | None:intergenic | 25.0% |
| ! | TTTATACTTCAAATTCCTTC+AGG | + | chr4.3:32256771-32256790 | MS.gene031837:intron | 25.0% |
| !! | AAGTTATTTCACTTCTGAAT+TGG | - | chr4.3:32260692-32260711 | None:intergenic | 25.0% |
| !! | GAATTTGAAGTATAAAGTCT+TGG | - | chr4.3:32256767-32256786 | None:intergenic | 25.0% |
| !! | TAATTTTCTCTATAGCTTCT+TGG | - | chr4.3:32259404-32259423 | None:intergenic | 25.0% |
| !! | TGATTAATCTGATATTTTGC+AGG | + | chr4.3:32260757-32260776 | MS.gene031837:intron | 25.0% |
| !! | TTAACGATTGCGTAAATTTT+TGG | + | chr4.3:32256732-32256751 | MS.gene031837:intron | 25.0% |
| !!! | ATTTTCTGAGAATGAATTAC+TGG | + | chr4.3:32259620-32259639 | MS.gene031837:CDS | 25.0% |
| !!! | CTTAAAGTGTTTTGCATTAA+CGG | - | chr4.3:32258206-32258225 | None:intergenic | 25.0% |
| !!! | GCAATTTTGATTCTATTTCA+AGG | - | chr4.3:32259824-32259843 | None:intergenic | 25.0% |
| AAAACCTATTGGAAATTGTG+AGG | + | chr4.3:32259169-32259188 | MS.gene031837:CDS | 30.0% | |
| AAACCTATTGGAAATTGTGA+GGG | + | chr4.3:32259170-32259189 | MS.gene031837:CDS | 30.0% | |
| AAACCTATTTGTCTCTACAA+AGG | + | chr4.3:32257994-32258013 | MS.gene031837:CDS | 30.0% | |
| AACAGAGAAATACAGAATTC+AGG | + | chr4.3:32258888-32258907 | MS.gene031837:CDS | 30.0% | |
| AACTAGCAATAGAAGTAGAA+AGG | - | chr4.3:32260303-32260322 | None:intergenic | 30.0% | |
| AAGCTTAATGCAGAGAAAAA+AGG | + | chr4.3:32258154-32258173 | MS.gene031837:CDS | 30.0% | |
| AATCTTTATCTGTCCTTCTA+AGG | - | chr4.3:32259913-32259932 | None:intergenic | 30.0% | |
| ACAAGAAAAAGTTTCTGAGT+TGG | + | chr4.3:32258024-32258043 | MS.gene031837:CDS | 30.0% | |
| AGAACTTTCTACTATTCAAG+AGG | + | chr4.3:32257829-32257848 | MS.gene031837:CDS | 30.0% | |
| AGAATCTTTAAATGCTGTGA+CGG | + | chr4.3:32259086-32259105 | MS.gene031837:CDS | 30.0% | |
| AGAATTCATTAAAGTCGAGA+AGG | + | chr4.3:32257148-32257167 | MS.gene031837:CDS | 30.0% | |
| AGAGGAAAAACTAAAGCTTT+CGG | + | chr4.3:32258243-32258262 | MS.gene031837:CDS | 30.0% | |
| ATCCAAGAAGAATTCACAAT+TGG | + | chr4.3:32258705-32258724 | MS.gene031837:CDS | 30.0% | |
| ATTAACGGTTAGATCTTCAA+CGG | - | chr4.3:32258191-32258210 | None:intergenic | 30.0% | |
| CACTTAAAACAGTATTGCTT+AGG | + | chr4.3:32256939-32256958 | MS.gene031837:intron | 30.0% | |
| CGTTAATGCAAAACACTTTA+AGG | + | chr4.3:32258204-32258223 | MS.gene031837:CDS | 30.0% | |
| GACATTGTCAAGATGTTTAT+TGG | - | chr4.3:32258971-32258990 | None:intergenic | 30.0% | |
| GACTAATCAGAATCTAAAGA+AGG | + | chr4.3:32260447-32260466 | MS.gene031837:CDS | 30.0% | |
| GATAAAGATTTACGAAGAAC+AGG | + | chr4.3:32259923-32259942 | MS.gene031837:CDS | 30.0% | |
| GATTTATTGCAGGAAACAAA+TGG | + | chr4.3:32257062-32257081 | MS.gene031837:intron | 30.0% | |
| GGATGATTTAAATCTTACAC+AGG | + | chr4.3:32259191-32259210 | MS.gene031837:CDS | 30.0% | |
| TATGCTTAATGTAAAGGCAA+AGG | - | chr4.3:32256985-32257004 | None:intergenic | 30.0% | |
| TGACTCTAAATCACTCAATT+TGG | - | chr4.3:32260132-32260151 | None:intergenic | 30.0% | |
| TTAAGCATAAGCCAAATGAA+TGG | + | chr4.3:32256996-32257015 | MS.gene031837:intron | 30.0% | |
| TTGGCTTATGCTTAATGTAA+AGG | - | chr4.3:32256991-32257010 | None:intergenic | 30.0% | |
| TTTAATGAATTCTCCATCTG+AGG | - | chr4.3:32257141-32257160 | None:intergenic | 30.0% | |
| ! | AACAGATTCTCTTTTATCTC+AGG | + | chr4.3:32258282-32258301 | MS.gene031837:CDS | 30.0% |
| ! | AACTTCCAATAACTGTGTTT+TGG | - | chr4.3:32257867-32257886 | None:intergenic | 30.0% |
| ! | CATTTTCTAATGATGTTGCA+GGG | + | chr4.3:32261341-32261360 | MS.gene031837:intron | 30.0% |
| ! | GCTTGAGAAAATCAAGATTT+TGG | + | chr4.3:32259452-32259471 | MS.gene031837:CDS | 30.0% |
| ! | GGAAAAATTGAAACTTGTTC+AGG | + | chr4.3:32260088-32260107 | MS.gene031837:CDS | 30.0% |
| ! | TAATCTGATATTTTGCAGGT+TGG | + | chr4.3:32260761-32260780 | MS.gene031837:intron | 30.0% |
| ! | TACAGCAAGATTTTCTTCAA+TGG | - | chr4.3:32259292-32259311 | None:intergenic | 30.0% |
| ! | TAGCTCTATTTCACTTTCAT+TGG | - | chr4.3:32259064-32259083 | None:intergenic | 30.0% |
| ! | TGAAGAAAATCTTGCTGTAA+GGG | + | chr4.3:32259293-32259312 | MS.gene031837:CDS | 30.0% |
| ! | TGAGAAAATCAAGATTTTGG+AGG | + | chr4.3:32259455-32259474 | MS.gene031837:CDS | 30.0% |
| ! | TTCTTCTAGAGAATTCTTCA+GGG | - | chr4.3:32261117-32261136 | None:intergenic | 30.0% |
| ! | TTGAAGAAAATCTTGCTGTA+AGG | + | chr4.3:32259292-32259311 | MS.gene031837:CDS | 30.0% |
| !! | ATGAATTTCAAGTTCATCCT+TGG | + | chr4.3:32261530-32261549 | MS.gene031837:CDS | 30.0% |
| !! | ATTTTGGAGGAAAATATTGC+AGG | + | chr4.3:32259468-32259487 | MS.gene031837:CDS | 30.0% |
| !! | TCAGAAAGATGAAAGCATTA+AGG | + | chr4.3:32256584-32256603 | MS.gene031837:CDS | 30.0% |
| !! | TGAAGAATCTTTGAAATCTG+AGG | + | chr4.3:32260525-32260544 | MS.gene031837:CDS | 30.0% |
| !!! | CTGCAGATTGTATTTTTTCT+CGG | - | chr4.3:32257438-32257457 | None:intergenic | 30.0% |
| !!! | GCACTTGTTTTACAAAACAT+AGG | - | chr4.3:32260670-32260689 | None:intergenic | 30.0% |
| AAATGTGCTGAATGAAAAGG+TGG | + | chr4.3:32260865-32260884 | MS.gene031837:CDS | 35.0% | |
| AACCAAGATTGATGAACTTC+AGG | + | chr4.3:32259665-32259684 | MS.gene031837:CDS | 35.0% | |
| AAGACTTCTTTGACTAACAG+TGG | - | chr4.3:32258386-32258405 | None:intergenic | 35.0% | |
| AATGAATCCTACGCTAACAA+GGG | - | chr4.3:32261277-32261296 | None:intergenic | 35.0% | |
| AATGCAGAGAAAAAAGGACT+TGG | + | chr4.3:32258160-32258179 | MS.gene031837:CDS | 35.0% | |
| AATTCATGATAGGCGAATCA+TGG | - | chr4.3:32261517-32261536 | None:intergenic | 35.0% | |
| ACTCAATTTGGACTCATAGA+CGG | - | chr4.3:32260120-32260139 | None:intergenic | 35.0% | |
| ACTCTCCAAAACACAGTTAT+TGG | + | chr4.3:32257859-32257878 | MS.gene031837:CDS | 35.0% | |
| AGAAACTGCTGGAATAAATG+AGG | + | chr4.3:32260067-32260086 | MS.gene031837:CDS | 35.0% | |
| AGAAATCTGCATTGCAAAGT+AGG | + | chr4.3:32260575-32260594 | MS.gene031837:CDS | 35.0% | |
| ATATAGAGCTTACTTCTGCA+AGG | + | chr4.3:32259322-32259341 | MS.gene031837:CDS | 35.0% | |
| ATGCAGAGAAAAAAGGACTT+GGG | + | chr4.3:32258161-32258180 | MS.gene031837:CDS | 35.0% | |
| ATTAAACCTGCGAAAGACTT+CGG | + | chr4.3:32257937-32257956 | MS.gene031837:CDS | 35.0% | |
| ATTATCTTCGGCATCATTCT+TGG | + | chr4.3:32261569-32261588 | MS.gene031837:CDS | 35.0% | |
| ATTTCTTGAAGCACAAGAGA+AGG | + | chr4.3:32257235-32257254 | MS.gene031837:CDS | 35.0% | |
| CAAGAAGAATTCACAATTGG+AGG | + | chr4.3:32258708-32258727 | MS.gene031837:CDS | 35.0% | |
| CAAGGTAACTATCCAAATCT+CGG | + | chr4.3:32261229-32261248 | MS.gene031837:intron | 35.0% | |
| CAGCTTCTCATTCAATTCTT+TGG | - | chr4.3:32259886-32259905 | None:intergenic | 35.0% | |
| CCTTGAAAATACACTGCAAA+CGG | + | chr4.3:32259038-32259057 | MS.gene031837:CDS | 35.0% | |
| CTCCAATTGTGAATTCTTCT+TGG | - | chr4.3:32258710-32258729 | None:intergenic | 35.0% | |
| CTTCCTTTGTAGAGACAAAT+AGG | - | chr4.3:32258000-32258019 | None:intergenic | 35.0% | |
| GAAGATCTTCATAGTGAATC+CGG | + | chr4.3:32258349-32258368 | MS.gene031837:CDS | 35.0% | |
| TAATTTACCCTTGTTAGCGT+AGG | + | chr4.3:32261267-32261286 | MS.gene031837:intron | 35.0% | |
| TATCAACACGCAGATATCTT+CGG | + | chr4.3:32260396-32260415 | MS.gene031837:intron | 35.0% | |
| TCAGCATACAAGAACAACAT+TGG | - | chr4.3:32260986-32261005 | None:intergenic | 35.0% | |
| TCTGAGAATGAATTACTGGT+TGG | + | chr4.3:32259624-32259643 | MS.gene031837:CDS | 35.0% | |
| TCTTCTTAATAGCCTATTGC+AGG | + | chr4.3:32258636-32258655 | MS.gene031837:CDS | 35.0% | |
| TGAAGATAGTTTGAGCAAAC+TGG | + | chr4.3:32259527-32259546 | MS.gene031837:CDS | 35.0% | |
| TGAATCTAGACTACATGAAG+AGG | + | chr4.3:32260630-32260649 | MS.gene031837:CDS | 35.0% | |
| TGATGAGAAAATCTCAGTCA+AGG | + | chr4.3:32261211-32261230 | MS.gene031837:CDS | 35.0% | |
| TGCTGATAAGAAAGATGCTT+TGG | + | chr4.3:32261373-32261392 | MS.gene031837:CDS | 35.0% | |
| TTATCTTCGGCATCATTCTT+GGG | + | chr4.3:32261570-32261589 | MS.gene031837:CDS | 35.0% | |
| TTCATTGGCAGAATGAGTTT+CGG | - | chr4.3:32259793-32259812 | None:intergenic | 35.0% | |
| TTTGCTTCGGATATTTCCTT+AGG | - | chr4.3:32257098-32257117 | None:intergenic | 35.0% | |
| ! | GAAGAAAATCTTGCTGTAAG+GGG | + | chr4.3:32259294-32259313 | MS.gene031837:CDS | 35.0% |
| ! | GCATTTTCTAATGATGTTGC+AGG | + | chr4.3:32261340-32261359 | MS.gene031837:intron | 35.0% |
| ! | GTCGAGATGAGATATTTTCT+CGG | - | chr4.3:32258584-32258603 | None:intergenic | 35.0% |
| ! | GTTCTTCTAGAGAATTCTTC+AGG | - | chr4.3:32261118-32261137 | None:intergenic | 35.0% |
| ! | TCTCTGAAGGAAGAATTGAA+GGG | + | chr4.3:32257746-32257765 | MS.gene031837:CDS | 35.0% |
| ! | TGAGCTTCTTTCTGTTTTGT+GGG | - | chr4.3:32257198-32257217 | None:intergenic | 35.0% |
| ! | TTCTCTGAAGGAAGAATTGA+AGG | + | chr4.3:32257745-32257764 | MS.gene031837:CDS | 35.0% |
| !! | GCTCTTGTATCGATTATCTT+CGG | + | chr4.3:32261557-32261576 | MS.gene031837:CDS | 35.0% |
| !! | GGATCAAATCTTCTAGTTCT+CGG | - | chr4.3:32258804-32258823 | None:intergenic | 35.0% |
| AACTTTCTACAGAAGAGGCA+CGG | + | chr4.3:32257597-32257616 | MS.gene031837:CDS | 40.0% | |
| ACAGACTACTATAGCTAACC+AGG | + | chr4.3:32260916-32260935 | MS.gene031837:CDS | 40.0% | |
| ACATGAAAACTCTCAGCTGA+AGG | + | chr4.3:32257313-32257332 | MS.gene031837:CDS | 40.0% | |
| ATCTCAGAAGTTGGAACTAG+AGG | + | chr4.3:32261088-32261107 | MS.gene031837:CDS | 40.0% | |
| ATGCTTTGTCACCAAGTCTT+CGG | - | chr4.3:32260222-32260241 | None:intergenic | 40.0% | |
| CAAAGAAGTCTTGAGCTTGA+AGG | + | chr4.3:32258394-32258413 | MS.gene031837:CDS | 40.0% | |
| CAAAGATATAGACTGTTCCC+CGG | - | chr4.3:32259496-32259515 | None:intergenic | 40.0% | |
| CAATGAATCCTACGCTAACA+AGG | - | chr4.3:32261278-32261297 | None:intergenic | 40.0% | |
| CAATTCAGAGCTTGAACAGA+AGG | + | chr4.3:32258315-32258334 | MS.gene031837:CDS | 40.0% | |
| CATCCCTCACAATTTCCAAT+AGG | - | chr4.3:32259176-32259195 | None:intergenic | 40.0% | |
| CATGAAAACTCTCAGCTGAA+GGG | + | chr4.3:32257314-32257333 | MS.gene031837:CDS | 40.0% | |
| CGAAGTTACATTGAAGAGTC+AGG | + | chr4.3:32258096-32258115 | MS.gene031837:CDS | 40.0% | |
| CTCCTGAAGTTCATCAATCT+TGG | - | chr4.3:32259670-32259689 | None:intergenic | 40.0% | |
| CTTTCGCAGGTTTAATTCCT+CGG | - | chr4.3:32257933-32257952 | None:intergenic | 40.0% | |
| GAAATTGAGTGCGAAAAGCA+TGG | + | chr4.3:32257709-32257728 | MS.gene031837:CDS | 40.0% | |
| GAAGAATTCACAATTGGAGG+AGG | + | chr4.3:32258711-32258730 | MS.gene031837:CDS | 40.0% | |
| GAGAAGCTGAATACCTTAGA+AGG | + | chr4.3:32259897-32259916 | MS.gene031837:CDS | 40.0% | |
| GCTTCAAGAAATTCTCTGCT+AGG | - | chr4.3:32257227-32257246 | None:intergenic | 40.0% | |
| GGAAAAACTAAAGCTTTCGG+AGG | + | chr4.3:32258246-32258265 | MS.gene031837:CDS | 40.0% | |
| GGAGTTGTGTAGTGATTTAG+AGG | + | chr4.3:32258225-32258244 | MS.gene031837:CDS | 40.0% | |
| TAAGCAGAAAGAGCTTCTTC+AGG | + | chr4.3:32257496-32257515 | MS.gene031837:CDS | 40.0% | |
| TCAAGAAATTCTCTGCTAGG+AGG | - | chr4.3:32257224-32257243 | None:intergenic | 40.0% | |
| TCTCGACGCTAAATTGAAAG+AGG | + | chr4.3:32258597-32258616 | MS.gene031837:CDS | 40.0% | |
| TGAACAGAAGGTGAAGTCTT+TGG | + | chr4.3:32258327-32258346 | MS.gene031837:CDS | 40.0% | |
| TGAAGGAGTTGTCATTGTTC+TGG | + | chr4.3:32256801-32256820 | MS.gene031837:intron | 40.0% | |
| TGACCTTGAAGAGAAGTTGA+AGG | + | chr4.3:32260489-32260508 | MS.gene031837:CDS | 40.0% | |
| TGCAGAGAAAAAAGGACTTG+GGG | + | chr4.3:32258162-32258181 | MS.gene031837:CDS | 40.0% | |
| TGCTGAGTCAGAAAACCTAT+TGG | + | chr4.3:32259158-32259177 | MS.gene031837:CDS | 40.0% | |
| TTCCTCGTCTTTCTTTGCTT+CGG | - | chr4.3:32257111-32257130 | None:intergenic | 40.0% | |
| TTCCTTCAGGACAGAAATGA+AGG | + | chr4.3:32256784-32256803 | MS.gene031837:intron | 40.0% | |
| TTGAAGCACAAGAGAAGGTT+CGG | + | chr4.3:32257240-32257259 | MS.gene031837:CDS | 40.0% | |
| ! | ATTGCAGAAGCATACTGAGA+AGG | + | chr4.3:32259851-32259870 | MS.gene031837:CDS | 40.0% |
| ! | CAACTCACTCACTCTCTTTT+CGG | - | chr4.3:32258854-32258873 | None:intergenic | 40.0% |
| ! | CCGTTTGCAGTGTATTTTCA+AGG | - | chr4.3:32259041-32259060 | None:intergenic | 40.0% |
| ! | CTGAGAGTTTTCATGTTCAG+AGG | - | chr4.3:32257309-32257328 | None:intergenic | 40.0% |
| ! | CTGAGCTTCTTTCTGTTTTG+TGG | - | chr4.3:32257199-32257218 | None:intergenic | 40.0% |
| ! | CTGATTTGATATGAGAGCTC+TGG | - | chr4.3:32258825-32258844 | None:intergenic | 40.0% |
| ! | TTCTGAGTTGGAAAGTGCAA+AGG | + | chr4.3:32258036-32258055 | MS.gene031837:CDS | 40.0% |
| ! | TTCTTGCTCTTCCTTTTCGA+TGG | - | chr4.3:32261431-32261450 | None:intergenic | 40.0% |
| !! | AAATGGAGACTTGTTGCCTA+AGG | + | chr4.3:32257079-32257098 | MS.gene031837:CDS | 40.0% |
| !! | CAGTGTATTTTCAAGGCTTG+AGG | - | chr4.3:32259034-32259053 | None:intergenic | 40.0% |
| !! | CTGTTCAAGCTCTGAATTGT+TGG | - | chr4.3:32258314-32258333 | None:intergenic | 40.0% |
| !! | GATGAAGAAGTTGATGCTGA+AGG | - | chr4.3:32261473-32261492 | None:intergenic | 40.0% |
| AAAGAATGCTGCCGAAGACT+TGG | + | chr4.3:32260208-32260227 | MS.gene031837:CDS | 45.0% | |
| AAAGGTCAAGCTGCAAATGG+AGG | + | chr4.3:32258054-32258073 | MS.gene031837:CDS | 45.0% | |
| AAGCTCTCGAAAGAAGATGC+AGG | + | chr4.3:32257556-32257575 | MS.gene031837:CDS | 45.0% | |
| ACCTTTGTCACTGGAACTTC+TGG | - | chr4.3:32256549-32256568 | None:intergenic | 45.0% | |
| AGCTTCTTGGAGCTTCTGTT+CGG | - | chr4.3:32259391-32259410 | None:intergenic | 45.0% | |
| AGGAAAATATTGCAGGAGCC+GGG | + | chr4.3:32259475-32259494 | MS.gene031837:CDS | 45.0% | |
| AGGAGCAGAATCTCAGAAGT+TGG | + | chr4.3:32261079-32261098 | MS.gene031837:CDS | 45.0% | |
| AGTGACAAAGGTTGTCGAAG+AGG | + | chr4.3:32256557-32256576 | MS.gene031837:CDS | 45.0% | |
| AGTGCAGACATTGAAGTCAC+AGG | + | chr4.3:32260250-32260269 | MS.gene031837:CDS | 45.0% | |
| ATCCGAAGCAAAGAAAGACG+AGG | + | chr4.3:32257106-32257125 | MS.gene031837:CDS | 45.0% | |
| ATTGGCAGAATGAGTTTCGG+AGG | - | chr4.3:32259790-32259809 | None:intergenic | 45.0% | |
| CGAAAAGAGAGTGAGTGAGT+TGG | + | chr4.3:32258852-32258871 | MS.gene031837:CDS | 45.0% | |
| CGAGAAGGAAGAGAATGTGT+TGG | + | chr4.3:32257163-32257182 | MS.gene031837:CDS | 45.0% | |
| CGCTAAATTGAAAGAGGCTG+AGG | + | chr4.3:32258603-32258622 | MS.gene031837:CDS | 45.0% | |
| CTCCTTCATTTCTGTCCTGA+AGG | - | chr4.3:32256789-32256808 | None:intergenic | 45.0% | |
| GAAAGAGCTTCTTCAGGTGA+AGG | + | chr4.3:32257502-32257521 | MS.gene031837:CDS | 45.0% | |
| GAACAGTGTTCTGTCAGAGA+AGG | + | chr4.3:32259695-32259714 | MS.gene031837:CDS | 45.0% | |
| GAGGAAAATATTGCAGGAGC+CGG | + | chr4.3:32259474-32259493 | MS.gene031837:CDS | 45.0% | |
| GAGGAAGATAATGCCTCAGA+TGG | + | chr4.3:32257125-32257144 | MS.gene031837:CDS | 45.0% | |
| GCATCTCATCTCCATCGAAA+AGG | + | chr4.3:32261417-32261436 | MS.gene031837:CDS | 45.0% | |
| GCATCTTGAAGCAGTAGTTG+AGG | + | chr4.3:32260013-32260032 | MS.gene031837:CDS | 45.0% | |
| GCTCCTTCAACTTCTCTTCA+AGG | - | chr4.3:32260495-32260514 | None:intergenic | 45.0% | |
| GCTGCAACTTTCTACAGAAG+AGG | + | chr4.3:32257592-32257611 | MS.gene031837:CDS | 45.0% | |
| GCTTGAAACACGCTTCATAG+CGG | + | chr4.3:32258471-32258490 | MS.gene031837:CDS | 45.0% | |
| TACAAATGCAGCTGCAGAAG+AGG | + | chr4.3:32258429-32258448 | MS.gene031837:CDS | 45.0% | |
| TATCCATGTGCTCCTGCAAT+AGG | - | chr4.3:32258651-32258670 | None:intergenic | 45.0% | |
| TCCAGAAGTTCCAGTGACAA+AGG | + | chr4.3:32256545-32256564 | MS.gene031837:CDS | 45.0% | |
| TCCGAGACTCATATTCAAGC+CGG | + | chr4.3:32261491-32261510 | MS.gene031837:CDS | 45.0% | |
| TCGATACAAGAGCTACTCCA+AGG | - | chr4.3:32261550-32261569 | None:intergenic | 45.0% | |
| TCTAATGATGTTGCAGGGTG+AGG | + | chr4.3:32261346-32261365 | MS.gene031837:intron | 45.0% | |
| TCTTCGACAACCTTTGTCAC+TGG | - | chr4.3:32256558-32256577 | None:intergenic | 45.0% | |
| TGAAACTCGTAAAGCTGAGC+TGG | + | chr4.3:32259968-32259987 | MS.gene031837:CDS | 45.0% | |
| TGAAGCACAAGAGAAGGTTC+GGG | + | chr4.3:32257241-32257260 | MS.gene031837:CDS | 45.0% | |
| TGAATCTGAGGGAAACAAGG+CGG | + | chr4.3:32257658-32257677 | MS.gene031837:CDS | 45.0% | |
| TGCAAAGGTCAAGCTGCAAA+TGG | + | chr4.3:32258051-32258070 | MS.gene031837:CDS | 45.0% | |
| TGCTGAATCTGAGGGAAACA+AGG | + | chr4.3:32257655-32257674 | MS.gene031837:CDS | 45.0% | |
| TTCAAGGATGCGAGCTTCAT+TGG | - | chr4.3:32259808-32259827 | None:intergenic | 45.0% | |
| TTGACTAACAGTGGCTGCAA+CGG | - | chr4.3:32258377-32258396 | None:intergenic | 45.0% | |
| ! | GAAAAGCATGGAAGACGAGA+TGG | + | chr4.3:32257721-32257740 | MS.gene031837:CDS | 45.0% |
| ! | TGTCACTGGAACTTCTGGAA+TGG | - | chr4.3:32256544-32256563 | None:intergenic | 45.0% |
| !! | TTTGCAGGTTGGAAGTGTTC+AGG | + | chr4.3:32260772-32260791 | MS.gene031837:intron | 45.0% |
| !!! | TATAAAAATAGTATTTTATT+CGG | - | chr4.3:32256652-32256671 | None:intergenic | 5.0% |
| AATGATGTTGCAGGGTGAGG+AGG | + | chr4.3:32261349-32261368 | MS.gene031837:intron | 50.0% | |
| AGACGAGATGGCTTCTCTGA+AGG | + | chr4.3:32257733-32257752 | MS.gene031837:CDS | 50.0% | |
| AGAGAAGGTTCGGGAACTTG+AGG | + | chr4.3:32257250-32257269 | MS.gene031837:CDS | 50.0% | |
| AGCGGCAGAGCAAAAGAATG+TGG | + | chr4.3:32258489-32258508 | MS.gene031837:CDS | 50.0% | |
| ATGATGTTGCAGGGTGAGGA+GGG | + | chr4.3:32261350-32261369 | MS.gene031837:intron | 50.0% | |
| CATGATAGGCGAATCATGGC+CGG | - | chr4.3:32261513-32261532 | None:intergenic | 50.0% | |
| GACAAAGGTTGTCGAAGAGG+TGG | + | chr4.3:32256560-32256579 | MS.gene031837:CDS | 50.0% | |
| GAGCGTGAAACAGAAACTGC+TGG | + | chr4.3:32260056-32260075 | MS.gene031837:CDS | 50.0% | |
| GAGGAGCTGCATAAGCAAAG+TGG | + | chr4.3:32257626-32257645 | MS.gene031837:CDS | 50.0% | |
| GGAAAATATTGCAGGAGCCG+GGG | + | chr4.3:32259476-32259495 | MS.gene031837:CDS | 50.0% | |
| GTGTTTCCGAAGTCTTTCGC+AGG | - | chr4.3:32257946-32257965 | None:intergenic | 50.0% | |
| TGCATTGCAAAGTAGGCTGC+AGG | + | chr4.3:32260582-32260601 | MS.gene031837:CDS | 50.0% | |
| ! | AGAAGAGGCACGGAAGTTTG+AGG | + | chr4.3:32257607-32257626 | MS.gene031837:CDS | 50.0% |
| ! | TAGCCTATTGCAGGAGCACA+TGG | + | chr4.3:32258645-32258664 | MS.gene031837:CDS | 50.0% |
| ! | TCTAGTAGACGAGTTGACCG+AGG | + | chr4.3:32257913-32257932 | MS.gene031837:CDS | 50.0% |
| ! | TGCTGAAGGAGTTGTCGCTT+CGG | - | chr4.3:32261459-32261478 | None:intergenic | 50.0% |
| !! | CTTCAGGTGAAGGAAGCGTT+TGG | + | chr4.3:32257512-32257531 | MS.gene031837:CDS | 50.0% |
| !! | GCCGGCTTGAATATGAGTCT+CGG | - | chr4.3:32261495-32261514 | None:intergenic | 50.0% |
| AACAGTGGCTGCAACGGTTC+CGG | - | chr4.3:32258371-32258390 | None:intergenic | 55.0% | |
| AACGCGTTCACGCACATACC+TGG | - | chr4.3:32260937-32260956 | None:intergenic | 55.0% | |
| CTCTGCTGCACTTGTCGAGA+AGG | + | chr4.3:32260157-32260176 | MS.gene031837:CDS | 55.0% | |
| GCAGCTCAGCACTCTTGAAG+AGG | + | chr4.3:32257454-32257473 | MS.gene031837:CDS | 55.0% | |
| GCTGCGCTCATTGTTCATGG+TGG | - | chr4.3:32258782-32258801 | None:intergenic | 55.0% | |
| GGCTCGCATGCTGAATCTGA+GGG | + | chr4.3:32257647-32257666 | MS.gene031837:CDS | 55.0% | |
| TCGGCTGCGCTCATTGTTCA+TGG | - | chr4.3:32258785-32258804 | None:intergenic | 55.0% | |
| TGGCTCGCATGCTGAATCTG+AGG | + | chr4.3:32257646-32257665 | MS.gene031837:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 32256522 | 32261604 | 32256522 | ID=MS.gene031837 |
| chr4.3 | mRNA | 32256522 | 32261604 | 32256522 | ID=MS.gene031837.t1;Parent=MS.gene031837 |
| chr4.3 | exon | 32256522 | 32256605 | 32256522 | ID=MS.gene031837.t1.exon1;Parent=MS.gene031837.t1 |
| chr4.3 | CDS | 32256522 | 32256605 | 32256522 | ID=cds.MS.gene031837.t1;Parent=MS.gene031837.t1 |
| chr4.3 | exon | 32257074 | 32260271 | 32257074 | ID=MS.gene031837.t1.exon2;Parent=MS.gene031837.t1 |
| chr4.3 | CDS | 32257074 | 32260271 | 32257074 | ID=cds.MS.gene031837.t1;Parent=MS.gene031837.t1 |
| chr4.3 | exon | 32260409 | 32260651 | 32260409 | ID=MS.gene031837.t1.exon3;Parent=MS.gene031837.t1 |
| chr4.3 | CDS | 32260409 | 32260651 | 32260409 | ID=cds.MS.gene031837.t1;Parent=MS.gene031837.t1 |
| chr4.3 | exon | 32260779 | 32260937 | 32260779 | ID=MS.gene031837.t1.exon4;Parent=MS.gene031837.t1 |
| chr4.3 | CDS | 32260779 | 32260937 | 32260779 | ID=cds.MS.gene031837.t1;Parent=MS.gene031837.t1 |
| chr4.3 | exon | 32261077 | 32261232 | 32261077 | ID=MS.gene031837.t1.exon5;Parent=MS.gene031837.t1 |
| chr4.3 | CDS | 32261077 | 32261232 | 32261077 | ID=cds.MS.gene031837.t1;Parent=MS.gene031837.t1 |
| chr4.3 | exon | 32261362 | 32261604 | 32261362 | ID=MS.gene031837.t1.exon6;Parent=MS.gene031837.t1 |
| chr4.3 | CDS | 32261362 | 32261604 | 32261362 | ID=cds.MS.gene031837.t1;Parent=MS.gene031837.t1 |
| Gene Sequence |
| Protein sequence |
