Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033715.t1 | XP_003624502.1 | 97.1 | 1023 | 29 | 1 | 1 | 1023 | 1 | 1022 | 0.00E+00 | 1992.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033715.t1 | P94078 | 73.3 | 1010 | 263 | 4 | 1 | 1009 | 1 | 1004 | 0.0e+00 | 1517.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033715.t1 | G7KX96 | 97.1 | 1023 | 29 | 1 | 1 | 1023 | 1 | 1022 | 0.0e+00 | 1992.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene033715 | MS.gene065392 | PPI |
| MS.gene033715 | MS.gene024279 | PPI |
| MS.gene033715 | MS.gene73391 | PPI |
| MS.gene033712 | MS.gene033715 | PPI |
| MS.gene033715 | MS.gene033714 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033715.t1 | MTR_7g084040 | 97.067 | 1023 | 29 | 1 | 1 | 1023 | 1 | 1022 | 0.0 | 2060 |
| MS.gene033715.t1 | MTR_7g084030 | 68.478 | 1012 | 311 | 5 | 1 | 1009 | 46 | 1052 | 0.0 | 1456 |
| MS.gene033715.t1 | MTR_3g098650 | 67.632 | 1001 | 314 | 7 | 15 | 1008 | 17 | 1014 | 0.0 | 1441 |
| MS.gene033715.t1 | MTR_8g075330 | 58.992 | 1012 | 397 | 4 | 7 | 1008 | 15 | 1018 | 0.0 | 1277 |
| MS.gene033715.t1 | MTR_7g084030 | 68.842 | 812 | 248 | 3 | 1 | 811 | 1 | 808 | 0.0 | 1185 |
| MS.gene033715.t1 | MTR_6g008850 | 27.721 | 873 | 490 | 25 | 35 | 820 | 137 | 955 | 9.12e-89 | 309 |
| MS.gene033715.t1 | MTR_4g071680 | 26.575 | 873 | 487 | 25 | 35 | 820 | 137 | 942 | 3.50e-78 | 278 |
| MS.gene033715.t1 | MTR_3g013720 | 73.469 | 49 | 13 | 0 | 48 | 96 | 11 | 59 | 1.39e-18 | 81.3 |
| MS.gene033715.t1 | MTR_2g066850 | 47.872 | 94 | 44 | 1 | 818 | 906 | 458 | 551 | 5.14e-17 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033715.t1 | AT3G26720 | 73.267 | 1010 | 263 | 4 | 1 | 1009 | 1 | 1004 | 0.0 | 1561 |
| MS.gene033715.t1 | AT3G26720 | 73.523 | 948 | 246 | 3 | 1 | 947 | 1 | 944 | 0.0 | 1477 |
| MS.gene033715.t1 | AT3G26720 | 73.706 | 947 | 244 | 3 | 1 | 946 | 1 | 943 | 0.0 | 1476 |
| MS.gene033715.t1 | AT3G26720 | 73.781 | 923 | 237 | 3 | 1 | 922 | 1 | 919 | 0.0 | 1443 |
| MS.gene033715.t1 | AT3G26720 | 73.753 | 922 | 237 | 3 | 1 | 921 | 1 | 918 | 0.0 | 1443 |
| MS.gene033715.t1 | AT5G13980 | 65.256 | 1016 | 335 | 7 | 1 | 1006 | 1 | 1008 | 0.0 | 1387 |
| MS.gene033715.t1 | AT5G13980 | 65.256 | 1016 | 335 | 7 | 1 | 1006 | 1 | 1008 | 0.0 | 1387 |
| MS.gene033715.t1 | AT5G13980 | 65.016 | 929 | 309 | 6 | 1 | 921 | 1 | 921 | 0.0 | 1276 |
| MS.gene033715.t1 | AT5G66150 | 57.797 | 1026 | 403 | 6 | 6 | 1008 | 16 | 1034 | 0.0 | 1231 |
| MS.gene033715.t1 | AT5G66150 | 57.838 | 1027 | 402 | 7 | 6 | 1008 | 16 | 1035 | 0.0 | 1229 |
| MS.gene033715.t1 | AT5G66150 | 55.882 | 748 | 299 | 7 | 285 | 1008 | 1 | 741 | 0.0 | 851 |
| MS.gene033715.t1 | AT5G14950 | 27.543 | 875 | 492 | 27 | 35 | 820 | 151 | 972 | 8.01e-86 | 301 |
Find 235 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGTATTGGCTTGCATTTC+CGG | 0.117350 | 7.4:+22960836 | MS.gene033715:CDS |
| TGCATCTGCACTTGCTTTAT+TGG | 0.200055 | 7.4:+22959415 | MS.gene033715:CDS |
| TACAAGTAGGCCAGCTTTAA+AGG | 0.202361 | 7.4:+22958990 | MS.gene033715:CDS |
| TCATTCTTTCAGGTTAATTT+AGG | 0.202674 | 7.4:+22963304 | MS.gene033715:intron |
| TTATGCAGATTCGAGATTTC+AGG | 0.202796 | 7.4:+22962912 | MS.gene033715:intron |
| AACCTGCTGATCAGATTTAA+TGG | 0.241905 | 7.4:-22962145 | None:intergenic |
| TGATGTTTCCCAACCTATTC+AGG | 0.255739 | 7.4:+22957727 | MS.gene033715:CDS |
| AGATAGAGCCAAACGATTAA+AGG | 0.256000 | 7.4:+22957479 | MS.gene033715:CDS |
| TGTCCTGCGCGGTCCGATAT+TGG | 0.263077 | 7.4:+22962273 | MS.gene033715:CDS |
| ACTTCATTTCAGATATTTAC+TGG | 0.278999 | 7.4:+22957653 | MS.gene033715:intron |
| ACCTGCTGGAAGCCTGTTAC+AGG | 0.280988 | 7.4:-22959470 | None:intergenic |
| ATGGACGCGACTTCATTAAA+AGG | 0.290746 | 7.4:+22962773 | MS.gene033715:CDS |
| AGATTAGTTTGGAAGGTAGA+AGG | 0.292289 | 7.4:+22965687 | MS.gene033715:CDS |
| AGGTTGTTTGGCAAGGTTCC+AGG | 0.308728 | 7.4:+22957514 | MS.gene033715:CDS |
| TGGAAAAGAAGAGATTAGTT+TGG | 0.318017 | 7.4:+22965676 | MS.gene033715:CDS |
| GCAGTTCAGGCTTACTTACT+TGG | 0.318307 | 7.4:+22957264 | MS.gene033715:CDS |
| CACCTATACGGTCAATTCTA+AGG | 0.318459 | 7.4:-22963973 | None:intergenic |
| GCTATCAATATGCTAATTCA+TGG | 0.319606 | 7.4:+22958272 | MS.gene033715:CDS |
| ACATAGATAAACTTGCGATT+TGG | 0.321410 | 7.4:-22956595 | None:intergenic |
| TCACATGCGAACTTGATCTT+TGG | 0.334210 | 7.4:-22959442 | None:intergenic |
| ACCGTTGCTGTTGGCTTTCA+CGG | 0.335617 | 7.4:+22964039 | MS.gene033715:CDS |
| AGTTCAACAACCAGCTTTGT+AGG | 0.342923 | 7.4:-22965756 | None:intergenic |
| TCTTGGTGGACCGCTCAGTT+GGG | 0.352125 | 7.4:+22963362 | MS.gene033715:CDS |
| AGGCTCCAGTGAAGAGTCTA+AGG | 0.354287 | 7.4:+22965710 | MS.gene033715:CDS |
| CTGATCATCCAAATGCATAT+TGG | 0.358385 | 7.4:+22958956 | MS.gene033715:CDS |
| AGAAAACTCTAGAGGTTGTT+TGG | 0.360019 | 7.4:+22957502 | MS.gene033715:CDS |
| CAATTTATCAAAGATGAGTT+TGG | 0.360039 | 7.4:+22957195 | MS.gene033715:CDS |
| TTTGCTGCCTCCACCATCTC+TGG | 0.360724 | 7.4:-22956755 | None:intergenic |
| GTCTTGGTGGACCGCTCAGT+TGG | 0.363453 | 7.4:+22963361 | MS.gene033715:CDS |
| AATATGCTAATTCATGGTTT+AGG | 0.365634 | 7.4:+22958278 | MS.gene033715:CDS |
| TAAAAGAACTCTACCTGAAT+AGG | 0.365941 | 7.4:-22957740 | None:intergenic |
| GTTTGGCCATTCTGCAGTTC+AGG | 0.369063 | 7.4:+22957251 | MS.gene033715:CDS |
| GTTAGAAGAGCGGTGTTGTT+TGG | 0.372444 | 7.4:-22964209 | None:intergenic |
| TTCGAGATTTCAGGACTGAT+TGG | 0.376321 | 7.4:+22962921 | MS.gene033715:CDS |
| GAGGACAGTAGCTTATATTA+AGG | 0.378777 | 7.4:-22959840 | None:intergenic |
| CTGCTGCAGGAACTGTTTGA+AGG | 0.383150 | 7.4:-22965821 | None:intergenic |
| ACAGATTGTGAGGATATATA+AGG | 0.393438 | 7.4:+22962513 | MS.gene033715:intron |
| CTGATTGATCAGACTACTCT+TGG | 0.394062 | 7.4:+22957168 | MS.gene033715:CDS |
| ACCTGCTGATCAGATTTAAT+GGG | 0.394847 | 7.4:-22962144 | None:intergenic |
| CAAGTTTATCTATGTTGAAA+TGG | 0.396778 | 7.4:+22956603 | MS.gene033715:CDS |
| AATGGAGATTCGGACATTCT+TGG | 0.400784 | 7.4:+22965785 | MS.gene033715:CDS |
| ATTTAGCACCCTCACCTATA+CGG | 0.405622 | 7.4:-22963985 | None:intergenic |
| AACTTGTTCCAATGGAGATT+CGG | 0.406586 | 7.4:+22965775 | MS.gene033715:CDS |
| ACCACTCTTACCTTCTTGTT+AGG | 0.407090 | 7.4:-22965532 | None:intergenic |
| TTTCAAGGGAGGAATGAATC+AGG | 0.407807 | 7.4:+22959178 | MS.gene033715:CDS |
| AACAATGAGTGGTTACTATC+AGG | 0.407898 | 7.4:+22959023 | MS.gene033715:CDS |
| TGGCAAGGTTCCAGGTCCCT+TGG | 0.410907 | 7.4:+22957522 | MS.gene033715:CDS |
| TAACCAGTCCAATATGCATT+TGG | 0.411552 | 7.4:-22958964 | None:intergenic |
| GTATAGGTGAGGGTGCTAAA+TGG | 0.417846 | 7.4:+22963987 | MS.gene033715:CDS |
| GGCTGGCAGATTGATCCGTT+TGG | 0.418749 | 7.4:+22957234 | MS.gene033715:CDS |
| CATGTGATAAACCCTGTAAC+AGG | 0.420690 | 7.4:+22959458 | MS.gene033715:CDS |
| ACAAACTCTAATGGAGTTGT+TGG | 0.420725 | 7.4:-22956436 | None:intergenic |
| ACCAGCTTTGTAGGATCAAC+TGG | 0.421591 | 7.4:-22965747 | None:intergenic |
| TCAATCTGCCAGCCAACTCT+TGG | 0.422596 | 7.4:-22957225 | None:intergenic |
| TTTGCATCAGTGTAGATAGA+TGG | 0.423252 | 7.4:-22958501 | None:intergenic |
| GTTTATTCACTATGTCAATC+AGG | 0.425293 | 7.4:+22958312 | MS.gene033715:CDS |
| TCAGAAGCTACCTTGGCTAA+TGG | 0.425782 | 7.4:+22959865 | MS.gene033715:CDS |
| TAATCAAGAAAGAGCTGAAA+TGG | 0.426949 | 7.4:+22965656 | MS.gene033715:CDS |
| TATTTAGGTAGCAAGGCAAT+TGG | 0.431073 | 7.4:+22959150 | MS.gene033715:intron |
| GACGGAGAAACAAACTCTAA+TGG | 0.431950 | 7.4:-22956445 | None:intergenic |
| TTAATCGTTTGGCTCTATCT+TGG | 0.432559 | 7.4:-22957476 | None:intergenic |
| TATTTGACCATCTACCAAAC+TGG | 0.432627 | 7.4:-22963389 | None:intergenic |
| ACAAGTAGGCCAGCTTTAAA+GGG | 0.433645 | 7.4:+22958991 | MS.gene033715:CDS |
| TCCCATTAAATCTGATCAGC+AGG | 0.434621 | 7.4:+22962143 | MS.gene033715:CDS |
| CGATATAGAACTCTCGGTCT+TGG | 0.435660 | 7.4:+22963345 | MS.gene033715:CDS |
| TCGAGATTTCAGGACTGATT+GGG | 0.436029 | 7.4:+22962922 | MS.gene033715:CDS |
| AGGCCATCATCCACAGGTAT+AGG | 0.440290 | 7.4:-22962682 | None:intergenic |
| AAGACTGGCTCACCTTTATG+AGG | 0.440774 | 7.4:+22964988 | MS.gene033715:CDS |
| CTTGGTGGACCGCTCAGTTG+GGG | 0.442323 | 7.4:+22963363 | MS.gene033715:CDS |
| TTCTGTGATATCATCACTCT+TGG | 0.442682 | 7.4:+22956567 | MS.gene033715:CDS |
| TGTGAGGATATATAAGGAAA+AGG | 0.447116 | 7.4:+22962519 | MS.gene033715:CDS |
| AAATAATTACAACCTCATAA+AGG | 0.448484 | 7.4:-22965000 | None:intergenic |
| AATCACATAATGTGGGCAAT+GGG | 0.449122 | 7.4:+22958238 | MS.gene033715:CDS |
| GCTGTTGGCTTTCACGGAGC+AGG | 0.451967 | 7.4:+22964045 | MS.gene033715:CDS |
| CTACTTTATTCCGCAGATGA+AGG | 0.452311 | 7.4:+22961295 | MS.gene033715:CDS |
| TGTATCTGCTGCCTTGGCTC+AGG | 0.455607 | 7.4:+22957893 | MS.gene033715:CDS |
| GCTCAATTCGTGGGTATCTC+AGG | 0.456024 | 7.4:+22962312 | MS.gene033715:CDS |
| TGACTTTGTATCTGCTGCCT+TGG | 0.457211 | 7.4:+22957887 | MS.gene033715:CDS |
| TGATGTACTTCATCCAATAT+CGG | 0.457448 | 7.4:-22962286 | None:intergenic |
| TTGTTTATAATCCTCTTGCT+TGG | 0.459312 | 7.4:+22960030 | MS.gene033715:CDS |
| GAAGTGAACCAACCCGTAGC+TGG | 0.459418 | 7.4:+22962950 | MS.gene033715:CDS |
| TCAGCTAACACGTCAGTGTT+TGG | 0.460097 | 7.4:-22959202 | None:intergenic |
| ACATTCTACACAGATTCTAA+TGG | 0.461165 | 7.4:+22962754 | MS.gene033715:CDS |
| ACTAATAATAGCATAGAAGT+TGG | 0.461610 | 7.4:+22961256 | MS.gene033715:CDS |
| ATCTCGAACGTGAATCCATC+AGG | 0.466466 | 7.4:-22957701 | None:intergenic |
| ATCTGTGTAGAATGTCTTGT+TGG | 0.467544 | 7.4:-22962746 | None:intergenic |
| GCAACGGTGAATATAATTCC+TGG | 0.467778 | 7.4:-22964024 | None:intergenic |
| ACCTGGTATTTCCAGATACA+AGG | 0.471130 | 7.4:+22963941 | MS.gene033715:intron |
| CTGCTGGGGACCTCAAGTAT+TGG | 0.471878 | 7.4:+22960823 | MS.gene033715:CDS |
| TTCCTTAGAATTGACCGTAT+AGG | 0.472302 | 7.4:+22963971 | MS.gene033715:CDS |
| TATTTACTGGGATATTTCCC+AGG | 0.474860 | 7.4:+22957666 | MS.gene033715:CDS |
| TAATTTGCAGGCAGAAGGCT+TGG | 0.477127 | 7.4:+22959391 | MS.gene033715:intron |
| CAAGAGTAGTCTGATCAATC+AGG | 0.477934 | 7.4:-22957167 | None:intergenic |
| GAACTCTACCTGAATAGGTT+GGG | 0.478148 | 7.4:-22957735 | None:intergenic |
| ATCAGGAGGATCATAATGCC+TGG | 0.478368 | 7.4:-22957684 | None:intergenic |
| TATGTAGGAACAGCCCCTGC+TGG | 0.480936 | 7.4:+22960807 | MS.gene033715:CDS |
| CAATCAGGTCAATGTAATGC+GGG | 0.481134 | 7.4:-22957152 | None:intergenic |
| TTAATGGGAAACGAGCCATT+TGG | 0.481967 | 7.4:-22962129 | None:intergenic |
| CTCAAAGTAATATTAGATAT+AGG | 0.489671 | 7.4:-22960759 | None:intergenic |
| TTTCCTTCCCAGAAGAGTCC+TGG | 0.490072 | 7.4:-22960719 | None:intergenic |
| ATTATATTCACCGTTGCTGT+TGG | 0.492362 | 7.4:+22964030 | MS.gene033715:CDS |
| ATACCTGTGGATGATGGCCT+TGG | 0.493634 | 7.4:+22962685 | MS.gene033715:CDS |
| CAGCACCATGATGCTGTTAG+TGG | 0.494009 | 7.4:+22959241 | MS.gene033715:CDS |
| TGCTGCAGGAACTGTTTGAA+GGG | 0.496123 | 7.4:-22965820 | None:intergenic |
| CCTCACTCTCATGATGATGT+TGG | 0.496579 | 7.4:+22956378 | MS.gene033715:CDS |
| ATAATCCTCTTGCTTGGACG+AGG | 0.496901 | 7.4:+22960036 | MS.gene033715:CDS |
| CTCACGTAACCCTTTAAAGC+TGG | 0.497153 | 7.4:-22959000 | None:intergenic |
| AAAGAAGAGATTAGTTTGGA+AGG | 0.497971 | 7.4:+22965680 | MS.gene033715:CDS |
| CCGGTATCTGTACCTCCCAT+TGG | 0.498659 | 7.4:+22960855 | MS.gene033715:CDS |
| GGGTAATAGTTTCCAGCTAC+GGG | 0.500717 | 7.4:-22962962 | None:intergenic |
| ATGTAGGAACAGCCCCTGCT+GGG | 0.502770 | 7.4:+22960808 | MS.gene033715:CDS |
| ATGGCGTCGTACACTTGGCC+AGG | 0.506930 | 7.4:+22964006 | MS.gene033715:CDS |
| CGGAAAAGTACTATTAAGAC+TGG | 0.508368 | 7.4:+22964973 | MS.gene033715:CDS |
| AAATAGAGCTGATGCTCCAC+AGG | 0.510798 | 7.4:+22963407 | MS.gene033715:CDS |
| TTCTTGATATTTAGGTAGCA+AGG | 0.511290 | 7.4:+22959143 | MS.gene033715:intron |
| ATGCACCTCGTCATAGCCTA+TGG | 0.512229 | 7.4:-22959308 | None:intergenic |
| AGAACTCTACCTGAATAGGT+TGG | 0.512423 | 7.4:-22957736 | None:intergenic |
| CATGATGATGTAAGAGGTGT+TGG | 0.512514 | 7.4:+22963585 | MS.gene033715:CDS |
| AAGAATGTCCGAATCTCCAT+TGG | 0.513779 | 7.4:-22965783 | None:intergenic |
| TGAAGAGTCTAAGGTGGTGA+GGG | 0.513966 | 7.4:+22965719 | MS.gene033715:CDS |
| TGTGATATCATCACTCTTGG+AGG | 0.514448 | 7.4:+22956570 | MS.gene033715:CDS |
| GCTAAATGGCGTCGTACACT+TGG | 0.514919 | 7.4:+22964001 | MS.gene033715:CDS |
| TGGGTAATAGTTTCCAGCTA+CGG | 0.515329 | 7.4:-22962963 | None:intergenic |
| TATAGAACTCTCGGTCTTGG+TGG | 0.519296 | 7.4:+22963348 | MS.gene033715:CDS |
| AGTATCAAGTCGTAAGCATA+CGG | 0.519696 | 7.4:+22960893 | MS.gene033715:CDS |
| ACTCTAGAGGTTGTTTGGCA+AGG | 0.521960 | 7.4:+22957507 | MS.gene033715:CDS |
| AGTCAAAGATCTTGTCAACT+CGG | 0.525179 | 7.4:+22956797 | MS.gene033715:CDS |
| ACTCTCATGATGATGTTGGT+TGG | 0.525408 | 7.4:+22956382 | MS.gene033715:CDS |
| CCAATGGGAGGTACAGATAC+CGG | 0.526896 | 7.4:-22960855 | None:intergenic |
| CTTCATTTCAGATATTTACT+GGG | 0.527545 | 7.4:+22957654 | MS.gene033715:intron |
| TTTCTTAATTTGCAGGCAGA+AGG | 0.528909 | 7.4:+22959386 | MS.gene033715:intron |
| GCATACGTCTTCCGTCCAAA+TGG | 0.530662 | 7.4:+22962114 | MS.gene033715:CDS |
| CCCTGTAACAGGCTTCCAGC+AGG | 0.531458 | 7.4:+22959469 | MS.gene033715:CDS |
| ACCAGTTGATCCTACAAAGC+TGG | 0.532090 | 7.4:+22965746 | MS.gene033715:CDS |
| CAATACTTGAGGTCCCCAGC+AGG | 0.532366 | 7.4:-22960822 | None:intergenic |
| TTCTTCTTGTACAGATTGTG+AGG | 0.533573 | 7.4:+22962503 | MS.gene033715:intron |
| TAATTCATGGTTTAGGCAGA+TGG | 0.534719 | 7.4:+22958285 | MS.gene033715:CDS |
| CACCGCTCTTCTAACTCTGC+AGG | 0.536765 | 7.4:+22964217 | MS.gene033715:CDS |
| ACATAGGTGCTGAAACCAAT+GGG | 0.537404 | 7.4:-22960870 | None:intergenic |
| AAATATGTCAAAGCATATGT+AGG | 0.537444 | 7.4:+22960792 | MS.gene033715:CDS |
| CCACATTATGTGATTCGTCC+TGG | 0.539153 | 7.4:-22958230 | None:intergenic |
| TTGCCAAGGCCATCATCCAC+AGG | 0.540002 | 7.4:-22962688 | None:intergenic |
| ACAAAACACAGCCACTAAAA+CGG | 0.540032 | 7.4:-22956280 | None:intergenic |
| GTCAAAGATCTTGTCAACTC+GGG | 0.540144 | 7.4:+22956798 | MS.gene033715:CDS |
| GGGCCTATACCTGTGGATGA+TGG | 0.540711 | 7.4:+22962679 | MS.gene033715:CDS |
| CATCCAAATGCATATTGGAC+TGG | 0.541163 | 7.4:+22958961 | MS.gene033715:CDS |
| ACATTTATCAGCAATGCAAA+CGG | 0.541893 | 7.4:-22963625 | None:intergenic |
| AGATAAAATAAACGTGCACT+TGG | 0.542140 | 7.4:+22956353 | MS.gene033715:CDS |
| TGAAGAAGAACCAAGGGACC+TGG | 0.542740 | 7.4:-22957532 | None:intergenic |
| TGTCCAGGACTCTTCTGGGA+AGG | 0.542814 | 7.4:+22960716 | MS.gene033715:CDS |
| TCCTCCGTCAGAAGCTACCT+TGG | 0.546594 | 7.4:+22959858 | MS.gene033715:CDS |
| GAATCACATAATGTGGGCAA+TGG | 0.546667 | 7.4:+22958237 | MS.gene033715:CDS |
| TTTGGTAAGATTCCAAGAGT+TGG | 0.547022 | 7.4:+22957213 | MS.gene033715:CDS |
| GTAAGATTCCAAGAGTTGGC+TGG | 0.547281 | 7.4:+22957217 | MS.gene033715:CDS |
| GGTTGTTGAACTTGTTCCAA+TGG | 0.548030 | 7.4:+22965767 | MS.gene033715:CDS |
| CACCACCTTAGACTCTTCAC+TGG | 0.548230 | 7.4:-22965715 | None:intergenic |
| TATGCAAAGCGGATTTCCAT+AGG | 0.551980 | 7.4:+22959292 | MS.gene033715:CDS |
| AGGCATTATGATCCTCCTGA+TGG | 0.552489 | 7.4:+22957686 | MS.gene033715:CDS |
| TGGACGCGACTTCATTAAAA+GGG | 0.554065 | 7.4:+22962774 | MS.gene033715:CDS |
| ATACTTGAGGTCCCCAGCAG+GGG | 0.555820 | 7.4:-22960820 | None:intergenic |
| TACATCAACAGCTCAATTCG+TGG | 0.556275 | 7.4:+22962302 | MS.gene033715:CDS |
| TGATTGATCAGACTACTCTT+GGG | 0.560165 | 7.4:+22957169 | MS.gene033715:CDS |
| TAATCCTCTTGCTTGGACGA+GGG | 0.560961 | 7.4:+22960037 | MS.gene033715:CDS |
| AATACTTGAGGTCCCCAGCA+GGG | 0.563201 | 7.4:-22960821 | None:intergenic |
| GGCTTACTTACTTGGAGCTG+AGG | 0.563211 | 7.4:+22957272 | MS.gene033715:CDS |
| CCTGCTGGAAGCCTGTTACA+GGG | 0.563293 | 7.4:-22959469 | None:intergenic |
| AGATAGCGATATAGAACTCT+CGG | 0.564919 | 7.4:+22963339 | MS.gene033715:CDS |
| ACCAGGCCTCACCTGAGCCA+AGG | 0.567720 | 7.4:-22957904 | None:intergenic |
| CTGTGCCACTAACAGCATCA+TGG | 0.569031 | 7.4:-22959246 | None:intergenic |
| GAGTAATAACTTCTTTGCCA+AGG | 0.569342 | 7.4:-22962702 | None:intergenic |
| CTTACGACTTGATACTACAT+AGG | 0.571591 | 7.4:-22960886 | None:intergenic |
| TGGGGATAATAAAGATTCCC+AGG | 0.573380 | 7.4:+22961568 | MS.gene033715:CDS |
| CCAGGACGAATCACATAATG+TGG | 0.574825 | 7.4:+22958230 | MS.gene033715:CDS |
| TCCTCCCTCGTCCAAGCAAG+AGG | 0.575053 | 7.4:-22960041 | None:intergenic |
| ATGCTTCATGATGATGTAAG+AGG | 0.581510 | 7.4:+22963579 | MS.gene033715:CDS |
| AATAGTTTCCAGCTACGGGT+TGG | 0.584416 | 7.4:-22962958 | None:intergenic |
| GGTGTTGTTTGGTAAACTGT+AGG | 0.586286 | 7.4:-22964198 | None:intergenic |
| TGAACTGCAGAATGGCCAAA+CGG | 0.588119 | 7.4:-22957249 | None:intergenic |
| GTTTCTAGGCTAATGTGACC+AGG | 0.588358 | 7.4:+22958212 | MS.gene033715:intron |
| TTGGTGGACCGCTCAGTTGG+GGG | 0.588993 | 7.4:+22963364 | MS.gene033715:CDS |
| TCATATTTCAATTATCTCAA+CGG | 0.590231 | 7.4:+22961213 | MS.gene033715:CDS |
| TGGACGGAAGACGTATGCCC+CGG | 0.590238 | 7.4:-22962109 | None:intergenic |
| GCTGCAGGAACTGTTTGAAG+GGG | 0.591936 | 7.4:-22965819 | None:intergenic |
| TACATAGGTGCTGAAACCAA+TGG | 0.592627 | 7.4:-22960871 | None:intergenic |
| TCAACGGAGTTCAGATCAGA+AGG | 0.595112 | 7.4:+22961229 | MS.gene033715:CDS |
| CACAGTGATGATGATCAATA+CGG | 0.600911 | 7.4:+22956245 | None:intergenic |
| TCAGGAGGATCATAATGCCT+GGG | 0.602840 | 7.4:-22957683 | None:intergenic |
| TGCATTGCTGATAAATGTGA+AGG | 0.602938 | 7.4:+22963630 | MS.gene033715:CDS |
| GTGAAGAGTCTAAGGTGGTG+AGG | 0.606014 | 7.4:+22965718 | MS.gene033715:CDS |
| ATGAATTAGCATATTGATAG+CGG | 0.606108 | 7.4:-22958270 | None:intergenic |
| AGTAAGCCTGAACTGCAGAA+TGG | 0.616488 | 7.4:-22957257 | None:intergenic |
| AGTAGCTTATATTAAGGAGA+GGG | 0.617083 | 7.4:-22959834 | None:intergenic |
| TTAGTTTGGAAGGTAGAAGG+AGG | 0.619123 | 7.4:+22965690 | MS.gene033715:CDS |
| TCCTCTTGCTTGGACGAGGG+AGG | 0.619804 | 7.4:+22960040 | MS.gene033715:CDS |
| AGAATTGACCGTATAGGTGA+GGG | 0.620881 | 7.4:+22963977 | MS.gene033715:CDS |
| TAGAATTGACCGTATAGGTG+AGG | 0.622322 | 7.4:+22963976 | MS.gene033715:CDS |
| ATAGATTGGGCCTATACCTG+TGG | 0.623623 | 7.4:+22962672 | MS.gene033715:intron |
| GAGTCTAAGGTGGTGAGGGG+AGG | 0.623763 | 7.4:+22965723 | MS.gene033715:CDS |
| GCCAAGGTAGCTTCTGACGG+AGG | 0.624916 | 7.4:-22959859 | None:intergenic |
| TCCGTGAAAGCCAACAGCAA+CGG | 0.625680 | 7.4:-22964040 | None:intergenic |
| TGTAGGAACAGCCCCTGCTG+GGG | 0.627495 | 7.4:+22960809 | MS.gene033715:CDS |
| ACATCAACAGCTCAATTCGT+GGG | 0.627777 | 7.4:+22962303 | MS.gene033715:CDS |
| GTATCAAGTCGTAAGCATAC+GGG | 0.629566 | 7.4:+22960894 | MS.gene033715:CDS |
| TTAGCCAAGGTAGCTTCTGA+CGG | 0.631493 | 7.4:-22959862 | None:intergenic |
| TACTTGTGAAGAAGAACCAA+GGG | 0.636369 | 7.4:-22957538 | None:intergenic |
| ATTAAAGGAGAAAACTCTAG+AGG | 0.636570 | 7.4:+22957494 | MS.gene033715:CDS |
| TGGGAAACGAGCCATTTGGA+CGG | 0.639577 | 7.4:-22962125 | None:intergenic |
| GAGTCTATGCCAGAAAATGT+TGG | 0.639708 | 7.4:-22964173 | None:intergenic |
| CAGTAGCTTATATTAAGGAG+AGG | 0.640047 | 7.4:-22959835 | None:intergenic |
| ACCGTTGATCAGTACTACGT+TGG | 0.642186 | 7.4:+22956411 | MS.gene033715:CDS |
| GAAATGCAAGCCAATACTTG+AGG | 0.645892 | 7.4:-22960833 | None:intergenic |
| GAAGAGTCTAAGGTGGTGAG+GGG | 0.652985 | 7.4:+22965720 | MS.gene033715:CDS |
| TCAATCAGGTCAATGTAATG+CGG | 0.655563 | 7.4:-22957153 | None:intergenic |
| CCAACATCATCATGAGAGTG+AGG | 0.655998 | 7.4:-22956378 | None:intergenic |
| ACTACATGTAAAGGTTGGAG+AGG | 0.656333 | 7.4:+22965462 | MS.gene033715:intron |
| CATCCAATATCGGACCGCGC+AGG | 0.657281 | 7.4:-22962276 | None:intergenic |
| AATATGCAGCTAATGAGCAG+TGG | 0.661561 | 7.4:+22958523 | MS.gene033715:CDS |
| TTACTTGTGAAGAAGAACCA+AGG | 0.666220 | 7.4:-22957539 | None:intergenic |
| ATCACATAATGTGGGCAATG+GGG | 0.676792 | 7.4:+22958239 | MS.gene033715:CDS |
| AATAGCATAGAAGTTGGACA+AGG | 0.679887 | 7.4:+22961262 | MS.gene033715:CDS |
| TCCAACGTAGTACTGATCAA+CGG | 0.683225 | 7.4:-22956412 | None:intergenic |
| CTCCAGTGAAGAGTCTAAGG+TGG | 0.687062 | 7.4:+22965713 | MS.gene033715:CDS |
| CAGGACGAATCACATAATGT+GGG | 0.687103 | 7.4:+22958231 | MS.gene033715:CDS |
| CAGGTCAATGTAATGCGGGG+TGG | 0.688828 | 7.4:-22957148 | None:intergenic |
| ATAGCATAGAAGTTGGACAA+GGG | 0.691079 | 7.4:+22961263 | MS.gene033715:CDS |
| AATCAGGTCAATGTAATGCG+GGG | 0.692814 | 7.4:-22957151 | None:intergenic |
| GGTTACGTGAGAACAATGAG+TGG | 0.698149 | 7.4:+22959012 | MS.gene033715:CDS |
| TCGAACGTGAATCCATCAGG+AGG | 0.700399 | 7.4:-22957698 | None:intergenic |
| TACCTGCAGAGTTAGAAGAG+CGG | 0.704633 | 7.4:-22964219 | None:intergenic |
| TGGTATGTGCATGCATGACG+AGG | 0.712035 | 7.4:+22957125 | MS.gene033715:CDS |
| TAGCTGCTGATTATGCAAAG+CGG | 0.723096 | 7.4:+22959281 | MS.gene033715:CDS |
| GATTTCCATAGGCTATGACG+AGG | 0.742371 | 7.4:+22959303 | MS.gene033715:CDS |
| TAGGTGCTGAAACCAATGGG+AGG | 0.751093 | 7.4:-22960867 | None:intergenic |
| TAGAATACAACATCACACAG+AGG | 0.780508 | 7.4:+22956322 | MS.gene033715:CDS |
| AGTGATGATGATCAATACGG+TGG | 0.815070 | 7.4:+22956248 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 22956252 | 22965863 | 22956252 | ID=MS.gene033715 |
| chr7.4 | mRNA | 22956252 | 22965863 | 22956252 | ID=MS.gene033715.t1;Parent=MS.gene033715 |
| chr7.4 | exon | 22956252 | 22956452 | 22956252 | ID=MS.gene033715.t1.exon1;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22956252 | 22956452 | 22956252 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22956541 | 22956624 | 22956541 | ID=MS.gene033715.t1.exon2;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22956541 | 22956624 | 22956541 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22956747 | 22956835 | 22956747 | ID=MS.gene033715.t1.exon3;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22956747 | 22956835 | 22956747 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22957119 | 22957293 | 22957119 | ID=MS.gene033715.t1.exon4;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22957119 | 22957293 | 22957119 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22957438 | 22957557 | 22957438 | ID=MS.gene033715.t1.exon5;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22957438 | 22957557 | 22957438 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22957665 | 22957748 | 22957665 | ID=MS.gene033715.t1.exon6;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22957665 | 22957748 | 22957665 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22957843 | 22957914 | 22957843 | ID=MS.gene033715.t1.exon7;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22957843 | 22957914 | 22957843 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22958220 | 22958333 | 22958220 | ID=MS.gene033715.t1.exon8;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22958220 | 22958333 | 22958220 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22958471 | 22958571 | 22958471 | ID=MS.gene033715.t1.exon9;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22958471 | 22958571 | 22958471 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22958951 | 22959044 | 22958951 | ID=MS.gene033715.t1.exon10;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22958951 | 22959044 | 22958951 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22959157 | 22959324 | 22959157 | ID=MS.gene033715.t1.exon11;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22959157 | 22959324 | 22959157 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22959401 | 22959490 | 22959401 | ID=MS.gene033715.t1.exon12;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22959401 | 22959490 | 22959401 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22959832 | 22959897 | 22959832 | ID=MS.gene033715.t1.exon13;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22959832 | 22959897 | 22959832 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22960023 | 22960079 | 22960023 | ID=MS.gene033715.t1.exon14;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22960023 | 22960079 | 22960023 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22960696 | 22960915 | 22960696 | ID=MS.gene033715.t1.exon15;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22960696 | 22960915 | 22960696 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22961212 | 22961351 | 22961212 | ID=MS.gene033715.t1.exon16;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22961212 | 22961351 | 22961212 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22961521 | 22961589 | 22961521 | ID=MS.gene033715.t1.exon17;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22961521 | 22961589 | 22961521 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22962105 | 22962164 | 22962105 | ID=MS.gene033715.t1.exon18;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22962105 | 22962164 | 22962105 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22962262 | 22962333 | 22962262 | ID=MS.gene033715.t1.exon19;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22962262 | 22962333 | 22962262 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22962517 | 22962564 | 22962517 | ID=MS.gene033715.t1.exon20;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22962517 | 22962564 | 22962517 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22962676 | 22962795 | 22962676 | ID=MS.gene033715.t1.exon21;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22962676 | 22962795 | 22962676 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22962920 | 22962985 | 22962920 | ID=MS.gene033715.t1.exon22;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22962920 | 22962985 | 22962920 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22963316 | 22963428 | 22963316 | ID=MS.gene033715.t1.exon23;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22963316 | 22963428 | 22963316 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22963575 | 22963659 | 22963575 | ID=MS.gene033715.t1.exon24;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22963575 | 22963659 | 22963575 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22963956 | 22964066 | 22963956 | ID=MS.gene033715.t1.exon25;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22963956 | 22964066 | 22963956 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22964143 | 22964238 | 22964143 | ID=MS.gene033715.t1.exon26;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22964143 | 22964238 | 22964143 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22964962 | 22965009 | 22964962 | ID=MS.gene033715.t1.exon27;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22964962 | 22965009 | 22964962 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22965475 | 22965543 | 22965475 | ID=MS.gene033715.t1.exon28;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22965475 | 22965543 | 22965475 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| chr7.4 | exon | 22965624 | 22965863 | 22965624 | ID=MS.gene033715.t1.exon29;Parent=MS.gene033715.t1 |
| chr7.4 | CDS | 22965624 | 22965863 | 22965624 | ID=cds.MS.gene033715.t1;Parent=MS.gene033715.t1 |
| Gene Sequence |
| Protein sequence |
