Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73391.t1 | XP_003624501.2 | 98.4 | 1016 | 15 | 1 | 1 | 1015 | 46 | 1061 | 0.00E+00 | 2022.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73391.t1 | Q8LPJ3 | 70.9 | 1017 | 277 | 9 | 1 | 1006 | 3 | 1011 | 0.0e+00 | 1466.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73391.t1 | G7KX95 | 98.4 | 1016 | 15 | 1 | 1 | 1015 | 46 | 1061 | 0.0e+00 | 2022.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050438 | MS.gene73391 | 0.824151 | 9.43E-54 | -1.69E-46 |
| MS.gene050778 | MS.gene73391 | 0.819074 | 1.41E-52 | -1.69E-46 |
| MS.gene050807 | MS.gene73391 | 0.82231 | 2.54E-53 | -1.69E-46 |
| MS.gene050959 | MS.gene73391 | 0.851335 | 9.49E-61 | -1.69E-46 |
| MS.gene052020 | MS.gene73391 | 0.816993 | 4.15E-52 | -1.69E-46 |
| MS.gene052133 | MS.gene73391 | 0.809932 | 1.48E-50 | -1.69E-46 |
| MS.gene052256 | MS.gene73391 | 0.811736 | 6.03E-51 | -1.69E-46 |
| MS.gene052665 | MS.gene73391 | 0.855178 | 7.51E-62 | -1.69E-46 |
| MS.gene052732 | MS.gene73391 | 0.807729 | 4.38E-50 | -1.69E-46 |
| MS.gene053132 | MS.gene73391 | 0.803835 | 2.88E-49 | -1.69E-46 |
| MS.gene053437 | MS.gene73391 | 0.839298 | 1.72E-57 | -1.69E-46 |
| MS.gene053630 | MS.gene73391 | 0.829378 | 5.32E-55 | -1.69E-46 |
| MS.gene054550 | MS.gene73391 | 0.804076 | 2.57E-49 | -1.69E-46 |
| MS.gene054942 | MS.gene73391 | 0.813322 | 2.71E-51 | -1.69E-46 |
| MS.gene056432 | MS.gene73391 | 0.818917 | 1.53E-52 | -1.69E-46 |
| MS.gene056584 | MS.gene73391 | 0.82774 | 1.32E-54 | -1.69E-46 |
| MS.gene058851 | MS.gene73391 | 0.815656 | 8.27E-52 | -1.69E-46 |
| MS.gene058906 | MS.gene73391 | 0.808592 | 2.87E-50 | -1.69E-46 |
| MS.gene058982 | MS.gene73391 | 0.808448 | 3.08E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene73391 | 0.82775 | 1.32E-54 | -1.69E-46 |
| MS.gene060619 | MS.gene73391 | 0.810468 | 1.14E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene035233 | MS.gene73391 | PPI |
| MS.gene73391 | MS.gene44227 | PPI |
| MS.gene73391 | MS.gene024280 | PPI |
| MS.gene73391 | MS.gene89676 | PPI |
| MS.gene73391 | MS.gene036585 | PPI |
| MS.gene73389 | MS.gene73391 | PPI |
| MS.gene73391 | MS.gene011927 | PPI |
| MS.gene73391 | MS.gene76352 | PPI |
| MS.gene28495 | MS.gene73391 | PPI |
| MS.gene017617 | MS.gene73391 | PPI |
| MS.gene73391 | MS.gene041467 | PPI |
| MS.gene033715 | MS.gene73391 | PPI |
| MS.gene23123 | MS.gene73391 | PPI |
| MS.gene050912 | MS.gene73391 | PPI |
| MS.gene73391 | MS.gene065393 | PPI |
| MS.gene73391 | MS.gene000897 | PPI |
| MS.gene072503 | MS.gene73391 | PPI |
| MS.gene73391 | MS.gene012130 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73391.t1 | MTR_7g084030 | 98.425 | 1016 | 15 | 1 | 1 | 1015 | 46 | 1061 | 0.0 | 2077 |
| MS.gene73391.t1 | MTR_7g084030 | 98.393 | 809 | 13 | 0 | 1 | 809 | 1 | 809 | 0.0 | 1667 |
| MS.gene73391.t1 | MTR_3g098650 | 71.471 | 999 | 276 | 4 | 14 | 1005 | 18 | 1014 | 0.0 | 1502 |
| MS.gene73391.t1 | MTR_7g084040 | 68.955 | 1005 | 306 | 3 | 6 | 1006 | 6 | 1008 | 0.0 | 1452 |
| MS.gene73391.t1 | MTR_8g075330 | 60.099 | 1010 | 389 | 8 | 6 | 1005 | 13 | 1018 | 0.0 | 1259 |
| MS.gene73391.t1 | MTR_6g008850 | 28.231 | 882 | 473 | 26 | 36 | 819 | 138 | 957 | 8.18e-80 | 283 |
| MS.gene73391.t1 | MTR_4g071680 | 27.211 | 882 | 469 | 27 | 36 | 819 | 138 | 944 | 1.60e-69 | 253 |
| MS.gene73391.t1 | MTR_3g013720 | 79.592 | 49 | 10 | 0 | 48 | 96 | 11 | 59 | 1.27e-20 | 87.0 |
| MS.gene73391.t1 | MTR_2g066850 | 65.152 | 66 | 19 | 1 | 808 | 869 | 447 | 512 | 1.03e-17 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73391.t1 | AT5G13980 | 70.895 | 1017 | 277 | 9 | 1 | 1006 | 3 | 1011 | 0.0 | 1509 |
| MS.gene73391.t1 | AT5G13980 | 70.895 | 1017 | 277 | 9 | 1 | 1006 | 3 | 1011 | 0.0 | 1509 |
| MS.gene73391.t1 | AT3G26720 | 66.006 | 1009 | 335 | 6 | 1 | 1006 | 1 | 1004 | 0.0 | 1411 |
| MS.gene73391.t1 | AT5G13980 | 71.629 | 927 | 247 | 8 | 1 | 919 | 3 | 921 | 0.0 | 1398 |
| MS.gene73391.t1 | AT3G26720 | 65.618 | 954 | 321 | 5 | 1 | 951 | 1 | 950 | 0.0 | 1333 |
| MS.gene73391.t1 | AT3G26720 | 66.138 | 945 | 313 | 5 | 1 | 942 | 1 | 941 | 0.0 | 1330 |
| MS.gene73391.t1 | AT3G26720 | 66.306 | 923 | 304 | 5 | 1 | 920 | 1 | 919 | 0.0 | 1306 |
| MS.gene73391.t1 | AT3G26720 | 66.306 | 923 | 304 | 5 | 1 | 920 | 1 | 919 | 0.0 | 1305 |
| MS.gene73391.t1 | AT5G66150 | 58.466 | 1004 | 394 | 5 | 23 | 1005 | 33 | 1034 | 0.0 | 1221 |
| MS.gene73391.t1 | AT5G66150 | 58.507 | 1005 | 393 | 6 | 23 | 1005 | 33 | 1035 | 0.0 | 1219 |
| MS.gene73391.t1 | AT5G66150 | 56.124 | 743 | 302 | 6 | 285 | 1005 | 1 | 741 | 0.0 | 852 |
| MS.gene73391.t1 | AT5G14950 | 26.954 | 883 | 486 | 27 | 36 | 819 | 152 | 974 | 1.01e-69 | 254 |
Find 206 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAGTTACCTTTACTATTC+AGG | 0.192715 | 7.4:-23034405 | MS.gene73391:CDS |
| GTTTCTTGCATTAACATAAT+TGG | 0.198476 | 7.4:+23034621 | None:intergenic |
| ATTAATGAGTGGCTATTATT+TGG | 0.217723 | 7.4:-23036075 | MS.gene73391:intron |
| AGCTCCACAGTTAACTCTTT+TGG | 0.222849 | 7.4:+23030363 | None:intergenic |
| CAGATCGTGCAAATGGTTTC+TGG | 0.225600 | 7.4:-23036142 | MS.gene73391:CDS |
| TGCTGTGCAGGCTTATTTAT+TGG | 0.230637 | 7.4:-23037703 | MS.gene73391:CDS |
| ACTTGTTGAAACTTTATAAC+TGG | 0.232743 | 7.4:+23035644 | None:intergenic |
| CACTCGGATTTCAACTACTA+TGG | 0.233395 | 7.4:-23033660 | MS.gene73391:CDS |
| CCTTGACATAGTAGTTTCTT+AGG | 0.253999 | 7.4:+23034958 | None:intergenic |
| CTTTACTATTCAGGGTATAA+TGG | 0.264566 | 7.4:-23034396 | MS.gene73391:CDS |
| TTCTATGGTTCATGCTCTAT+TGG | 0.267475 | 7.4:-23038568 | MS.gene73391:CDS |
| GTTACTACTGTCAAAGTAAA+TGG | 0.272153 | 7.4:+23030314 | None:intergenic |
| CATTTCGAACCTGTCTTTCA+TGG | 0.277535 | 7.4:+23034210 | None:intergenic |
| GCTGTGCAGGCTTATTTATT+GGG | 0.280320 | 7.4:-23037702 | MS.gene73391:CDS |
| CATTGTTATTATAACATTAC+AGG | 0.284184 | 7.4:-23031687 | MS.gene73391:intron |
| TGGTTCCAACAATTCTATTC+AGG | 0.292291 | 7.4:-23038703 | MS.gene73391:intron |
| GTTGAATCAACATCAGTTAC+TGG | 0.292971 | 7.4:-23035677 | MS.gene73391:CDS |
| TCGTAGTTTACCTTCTTTCC+TGG | 0.296348 | 7.4:+23031156 | None:intergenic |
| TCAGCTAATGAGTCTGTATT+TGG | 0.303542 | 7.4:+23035917 | None:intergenic |
| TCAATTTGCCAACCAATTCT+TGG | 0.320808 | 7.4:+23037741 | None:intergenic |
| GCAAAATGTGTTGGATTCTA+TGG | 0.320839 | 7.4:-23038583 | MS.gene73391:CDS |
| GTGTTCTTCCAGATCTTTGC+TGG | 0.324479 | 7.4:-23037343 | MS.gene73391:intron |
| TACTATGTCAAGGCATATTT+AGG | 0.326890 | 7.4:-23034948 | MS.gene73391:CDS |
| AGACTTGTTTGGAAAGTAGA+AGG | 0.327254 | 7.4:-23030429 | MS.gene73391:CDS |
| GCTAAATGGCGCCGTACTTT+TGG | 0.328700 | 7.4:-23031921 | MS.gene73391:CDS |
| GAAGTGCACCAGCCCGTTGC+TGG | 0.334798 | 7.4:-23033337 | MS.gene73391:CDS |
| ACCTCACAGGGTGTAGTCTC+TGG | 0.347973 | 7.4:-23038801 | MS.gene73391:CDS |
| TGGAGAAGAAAAGACTTGTT+TGG | 0.356314 | 7.4:-23030440 | MS.gene73391:CDS |
| GAGAACTATGAACCTCCTTC+TGG | 0.360730 | 7.4:-23037310 | MS.gene73391:CDS |
| GTTAAGCAGCTTGTTAGTTC+GGG | 0.360901 | 7.4:-23038021 | MS.gene73391:CDS |
| TCAGTTTCTGTACCACCATT+TGG | 0.361418 | 7.4:-23034885 | MS.gene73391:CDS |
| AGATAGGAATAAACGCAAAA+AGG | 0.361623 | 7.4:-23037551 | MS.gene73391:CDS |
| AGTTAAGCAGCTTGTTAGTT+CGG | 0.361974 | 7.4:-23038022 | MS.gene73391:CDS |
| TAAGACAGAATTCTCCGTTT+TGG | 0.363313 | 7.4:-23033007 | MS.gene73391:CDS |
| AGAAGAGTCTTGAGGTTATC+TGG | 0.364575 | 7.4:-23037528 | MS.gene73391:CDS |
| TCCTGCATCAGAAGTTGAAT+TGG | 0.367889 | 7.4:-23035447 | MS.gene73391:CDS |
| TTACCAACTCCATCTTCAAT+AGG | 0.369060 | 7.4:+23033692 | None:intergenic |
| CCTTGGGTGAGGGAGCTAAA+TGG | 0.374069 | 7.4:-23031935 | MS.gene73391:CDS |
| CGAACTCCTCTTTCAGAAAT+CGG | 0.375393 | 7.4:+23037772 | None:intergenic |
| TTTATAAGATGTGTTCCATT+TGG | 0.376310 | 7.4:+23034233 | None:intergenic |
| TTGTCCTTTCAGATTAATCT+TGG | 0.387749 | 7.4:-23033048 | MS.gene73391:intron |
| CTTTGTGCAGGCAGAGGAAC+TGG | 0.389496 | 7.4:-23035723 | MS.gene73391:intron |
| TTCGATTTGACTCCAAGAAT+TGG | 0.390690 | 7.4:-23037753 | MS.gene73391:CDS |
| TGAAAATGCAAGCCAATACT+TGG | 0.393326 | 7.4:+23034905 | None:intergenic |
| AATGACCTGAATAGAATTGT+TGG | 0.398399 | 7.4:+23038698 | None:intergenic |
| ATTGTGGTTTATAACTCTCT+TGG | 0.398651 | 7.4:-23035294 | MS.gene73391:CDS |
| TTCGTCATCACTGGCTTGCT+TGG | 0.400499 | 7.4:-23035699 | MS.gene73391:CDS |
| TGGGAAGCTCAATGTTCATC+TGG | 0.400751 | 7.4:-23038781 | MS.gene73391:CDS |
| CTCTATTGGCTGATAAGAAC+AGG | 0.401356 | 7.4:-23038554 | MS.gene73391:CDS |
| TTCTATAATAATATTTCCCT+TGG | 0.402828 | 7.4:+23031964 | None:intergenic |
| ATTGGTTCGAGGAAAGAGTT+TGG | 0.408245 | 7.4:-23035429 | MS.gene73391:intron |
| TTTAGAGGGCGAAAGAAGTC+AGG | 0.411577 | 7.4:-23035941 | MS.gene73391:CDS |
| CAATCGTTTAGCATAATCAT+TGG | 0.411610 | 7.4:+23035835 | None:intergenic |
| AGTCATGAAAAGTCTTCAAT+AGG | 0.411948 | 7.4:-23034691 | MS.gene73391:CDS |
| GTAGGATCGATTACCAAGAT+AGG | 0.415011 | 7.4:-23037567 | MS.gene73391:CDS |
| AATCAGTCCATGGATATATC+AGG | 0.417104 | 7.4:-23034065 | MS.gene73391:intron |
| AAAGTGGAGAATATATTTCC+TGG | 0.425358 | 7.4:+23031898 | None:intergenic |
| GTTTGGACATTCTGCTGTGC+AGG | 0.429270 | 7.4:-23037715 | MS.gene73391:CDS |
| GGTTGGCAAATTGACCCGTT+TGG | 0.434705 | 7.4:-23037732 | MS.gene73391:CDS |
| GAAGGAGGTTCATAGTTCTC+AGG | 0.436622 | 7.4:+23037313 | None:intergenic |
| TGAGTTACCTTTACTATTCA+GGG | 0.438695 | 7.4:-23034404 | MS.gene73391:CDS |
| CTGGAAATGGAGGTGTTTCA+AGG | 0.438959 | 7.4:-23030401 | MS.gene73391:CDS |
| AATCACATTATGTGGACAAT+GGG | 0.443770 | 7.4:-23036563 | MS.gene73391:CDS |
| GTAGAAGGGTCCTCTGGAAA+TGG | 0.445460 | 7.4:-23030414 | MS.gene73391:CDS |
| CGTAGTTTACCTTCTTTCCT+GGG | 0.446870 | 7.4:+23031157 | None:intergenic |
| GGGTAATAATTTCCAGCAAC+GGG | 0.449669 | 7.4:+23033325 | None:intergenic |
| TATGCTAAACGATTGGCAAT+AGG | 0.452324 | 7.4:-23035827 | MS.gene73391:CDS |
| ACTCCATCTTCAATAGGTAT+AGG | 0.454189 | 7.4:+23033698 | None:intergenic |
| AAACATTTGCAGGTTATTGA+TGG | 0.459153 | 7.4:-23035056 | MS.gene73391:intron |
| GCTTATATCTTCCGTCCAAA+TGG | 0.464533 | 7.4:-23034248 | MS.gene73391:CDS |
| CATAGAAGAGAATTCCCAAA+AGG | 0.468108 | 7.4:+23038853 | None:intergenic |
| TAATTTCTGTAACAGAATGC+TGG | 0.468169 | 7.4:-23034272 | MS.gene73391:intron |
| TTTCCATATTCAGGTTATTG+TGG | 0.471363 | 7.4:-23035310 | MS.gene73391:intron |
| TGTCCTTTCAGATTAATCTT+GGG | 0.474577 | 7.4:-23033047 | MS.gene73391:intron |
| ATAACTCTCTTGGTTGGAAG+AGG | 0.474966 | 7.4:-23035284 | MS.gene73391:CDS |
| AGTTATTCAGATCGTGCAAA+TGG | 0.477887 | 7.4:-23036149 | MS.gene73391:CDS |
| CATCCAAGACACCCAAGTAT+TGG | 0.478995 | 7.4:-23034917 | MS.gene73391:CDS |
| GGAACTGGTTTCGTCATCAC+TGG | 0.480083 | 7.4:-23035708 | MS.gene73391:CDS |
| CTTGTTGAAACTTTATAACT+GGG | 0.480817 | 7.4:+23035645 | None:intergenic |
| TCCTTTCAGGAACTTGATCA+AGG | 0.483430 | 7.4:-23031432 | MS.gene73391:intron |
| AGAATCTCAAATTCTACCTC+TGG | 0.484241 | 7.4:-23034997 | MS.gene73391:CDS |
| CGTGCAAATGGTTTCTGGAC+AGG | 0.485426 | 7.4:-23036137 | MS.gene73391:CDS |
| GAGCCTCGGTTCATCTGCTC+AGG | 0.488230 | 7.4:-23037494 | MS.gene73391:intron |
| GATTTGTCCATCTTCTAAGC+TGG | 0.488233 | 7.4:+23032963 | None:intergenic |
| AGATTCTATTTCTACACCGT+TGG | 0.493375 | 7.4:+23035013 | None:intergenic |
| CTGACATAGCGTTTCAAAGC+TGG | 0.497109 | 7.4:+23036098 | None:intergenic |
| CCATTTAGCTCCCTCACCCA+AGG | 0.497452 | 7.4:+23031935 | None:intergenic |
| GCGTTTCAAAGCTGGTCTAC+TGG | 0.497765 | 7.4:+23036106 | None:intergenic |
| GTAAAAGTGCGGATTTCCAT+TGG | 0.501131 | 7.4:+23030336 | None:intergenic |
| TACCAGACAGTACAAAGAAA+AGG | 0.505652 | 7.4:-23033932 | MS.gene73391:CDS |
| AATAATTTCCAGCAACGGGC+TGG | 0.505914 | 7.4:+23033329 | None:intergenic |
| AACTGTGGAGCTTGCTCCAA+TGG | 0.506887 | 7.4:-23030352 | MS.gene73391:CDS |
| ATCCTGAAAATGTTGTTACA+TGG | 0.508095 | 7.4:+23031738 | None:intergenic |
| CTACAGAACAGACTGGGACT+TGG | 0.508692 | 7.4:-23033359 | MS.gene73391:CDS |
| CTGTGCCGGTGACTGCATCA+TGG | 0.509159 | 7.4:+23035873 | None:intergenic |
| AAGTGTATAAACTGATGATC+TGG | 0.510611 | 7.4:+23034717 | None:intergenic |
| CAATACTTGGGTGTCTTGGA+TGG | 0.512823 | 7.4:+23034918 | None:intergenic |
| GAACAGGAAATTTATCTATG+TGG | 0.515196 | 7.4:-23038538 | MS.gene73391:CDS |
| GGTGTTATACTCTATAAACT+TGG | 0.516701 | 7.4:+23038821 | None:intergenic |
| CTCGGACAAATCACATTATG+TGG | 0.518821 | 7.4:-23036571 | MS.gene73391:CDS |
| TGCACAGCAGAATGTCCAAA+CGG | 0.521779 | 7.4:+23037717 | None:intergenic |
| ACCAATTCAACTTCTGATGC+AGG | 0.522885 | 7.4:+23035446 | None:intergenic |
| TGATGCACTTCATCTAGTAT+TGG | 0.525893 | 7.4:+23034091 | None:intergenic |
| TCGGAAAAGGCTAACAAAAG+TGG | 0.525918 | 7.4:+23031882 | None:intergenic |
| TATTATAGAATAGACCCCTT+GGG | 0.533906 | 7.4:-23031951 | MS.gene73391:CDS |
| TAGAATAGACCCCTTGGGTG+AGG | 0.534403 | 7.4:-23031946 | MS.gene73391:CDS |
| AAGCCAATACTTGGGTGTCT+TGG | 0.535952 | 7.4:+23034914 | None:intergenic |
| TGGTTTATAACTCTCTTGGT+TGG | 0.536231 | 7.4:-23035290 | MS.gene73391:CDS |
| CATTTAGCTCCCTCACCCAA+GGG | 0.538619 | 7.4:+23031936 | None:intergenic |
| CATTATACCCTGAATAGTAA+AGG | 0.540784 | 7.4:+23034397 | None:intergenic |
| ATATTTCCTGGCCAAAAGTA+CGG | 0.540811 | 7.4:+23031910 | None:intergenic |
| CGTATAAATGCGCTAATCGA+AGG | 0.540840 | 7.4:+23031400 | None:intergenic |
| GGCTTGTGTGCAAAATGTGT+TGG | 0.541656 | 7.4:-23038592 | MS.gene73391:CDS |
| TCAGAAGTTGAATTGGTTCG+AGG | 0.541864 | 7.4:-23035440 | MS.gene73391:CDS |
| GTGTAAGTGCTAAAACCAAA+TGG | 0.542048 | 7.4:+23034870 | None:intergenic |
| TGGAAAGTAGAAGGGTCCTC+TGG | 0.542542 | 7.4:-23030420 | MS.gene73391:CDS |
| AAATCACATTATGTGGACAA+TGG | 0.545205 | 7.4:-23036564 | MS.gene73391:CDS |
| TGGAAATGGAGGTGTTTCAA+GGG | 0.545678 | 7.4:-23030400 | MS.gene73391:CDS |
| TCCTGAAAATGTTGTTACAT+GGG | 0.545787 | 7.4:+23031739 | None:intergenic |
| ACTGTTGATCAGTACTATGT+TGG | 0.549819 | 7.4:-23038723 | MS.gene73391:CDS |
| ATTTGACTCCAAGAATTGGT+TGG | 0.549978 | 7.4:-23037749 | MS.gene73391:CDS |
| GCTTATCTGCAAATCAAGAA+AGG | 0.550208 | 7.4:-23030470 | MS.gene73391:CDS |
| GCACAGCAGAATGTCCAAAC+GGG | 0.551546 | 7.4:+23037718 | None:intergenic |
| TGGACACCGATTTCTGAAAG+AGG | 0.552492 | 7.4:-23037778 | MS.gene73391:CDS |
| TCTTATAAACCATGAAAGAC+AGG | 0.555377 | 7.4:-23034219 | MS.gene73391:intron |
| TGGGTAATAATTTCCAGCAA+CGG | 0.556408 | 7.4:+23033324 | None:intergenic |
| AAGAAATCGTCAGTCTTGAC+TGG | 0.557536 | 7.4:+23036273 | None:intergenic |
| TAAGATGTGTTCCATTTGGA+CGG | 0.558123 | 7.4:+23034237 | None:intergenic |
| TCAAATTCTACCTCTGGCTG+AGG | 0.558671 | 7.4:-23034991 | MS.gene73391:CDS |
| CAATGATTATGCTAAACGAT+TGG | 0.559018 | 7.4:-23035834 | MS.gene73391:CDS |
| ATAGAAGAGAATTCCCAAAA+GGG | 0.559727 | 7.4:+23038854 | None:intergenic |
| GTTCCAGTGACTGTTCTCCA+TGG | 0.560750 | 7.4:-23034115 | MS.gene73391:CDS |
| TTATTATAGAATAGACCCCT+TGG | 0.561110 | 7.4:-23031952 | MS.gene73391:CDS |
| TATAGAGTATAACACCTCAC+AGG | 0.564100 | 7.4:-23038814 | MS.gene73391:CDS |
| GGTCCTATACCTATTGAAGA+TGG | 0.564137 | 7.4:-23033701 | MS.gene73391:CDS |
| AAATCGAGTTGATGCTCCAC+AGG | 0.565718 | 7.4:-23032945 | MS.gene73391:intron |
| GGAGGATCCAGCTTAGAAGA+TGG | 0.568313 | 7.4:-23032970 | MS.gene73391:CDS |
| GGTCCATGGAGAACAGTCAC+TGG | 0.569176 | 7.4:+23034112 | None:intergenic |
| ATGATTGATCAGACTACACT+TGG | 0.569418 | 7.4:-23037798 | MS.gene73391:CDS |
| AAGGAGGTTCATAGTTCTCA+GGG | 0.570158 | 7.4:+23037314 | None:intergenic |
| TTGGGAATTCTCTTCTATGG+AGG | 0.570457 | 7.4:-23038849 | MS.gene73391:CDS |
| CCTCACAGGGTGTAGTCTCT+GGG | 0.571763 | 7.4:-23038800 | MS.gene73391:CDS |
| ATACCTATTGAAGATGGAGT+TGG | 0.572453 | 7.4:-23033695 | MS.gene73391:CDS |
| AGAATAGACCCCTTGGGTGA+GGG | 0.574887 | 7.4:-23031945 | MS.gene73391:CDS |
| AGTCTTGAGGTTATCTGGCA+AGG | 0.579058 | 7.4:-23037523 | MS.gene73391:CDS |
| ACGATTGGCAATAGGCTACA+AGG | 0.579394 | 7.4:-23035819 | MS.gene73391:CDS |
| GAAAAGTCTTCAATAGGTCA+AGG | 0.580083 | 7.4:-23034685 | MS.gene73391:CDS |
| GACTTGTTTGGAAAGTAGAA+GGG | 0.584116 | 7.4:-23030428 | MS.gene73391:CDS |
| GCTCATACTCATGATGATGT+TGG | 0.588207 | 7.4:-23038756 | MS.gene73391:CDS |
| CAACACCATGATGCAGTCAC+CGG | 0.591654 | 7.4:-23035878 | MS.gene73391:CDS |
| TGCATCAACGAATCAGTCCA+TGG | 0.592263 | 7.4:-23034075 | MS.gene73391:CDS |
| TTTGCATCTGTATATATGGA+GGG | 0.592290 | 7.4:+23036318 | None:intergenic |
| CTTCATCTAGTATTGGTCCA+TGG | 0.596258 | 7.4:+23034098 | None:intergenic |
| TACGTGACTACAGAACAGAC+TGG | 0.596442 | 7.4:-23033366 | MS.gene73391:CDS |
| TATAGCTCTATCCACCAAAA+CGG | 0.596879 | 7.4:+23032993 | None:intergenic |
| GGTAGGATGATAAAGATGAC+TGG | 0.599141 | 7.4:-23031769 | MS.gene73391:intron |
| CCTTTCAGGAACTTGATCAA+GGG | 0.599608 | 7.4:-23031431 | MS.gene73391:intron |
| CAAAGCACCTGATATATCCA+TGG | 0.601939 | 7.4:+23034058 | None:intergenic |
| GGTATTAGATCAAAGAAGTG+AGG | 0.605616 | 7.4:-23030500 | MS.gene73391:intron |
| TCAGGAACTTGATCAAGGGA+CGG | 0.606166 | 7.4:-23031427 | MS.gene73391:intron |
| AAATCAAGAAAGGACAGAGA+TGG | 0.607796 | 7.4:-23030460 | MS.gene73391:CDS |
| TTATGTTAATGCAAGAAACA+TGG | 0.614150 | 7.4:-23034617 | MS.gene73391:intron |
| TGTATAAACTGATGATCTGG+TGG | 0.614284 | 7.4:+23034720 | None:intergenic |
| CCTAAGAAACTACTATGTCA+AGG | 0.616978 | 7.4:-23034958 | MS.gene73391:CDS |
| AATATGCTGCAAATGAGTCA+TGG | 0.618901 | 7.4:-23036296 | MS.gene73391:CDS |
| AGTATCAATATGCACATACA+TGG | 0.619070 | 7.4:-23036529 | MS.gene73391:CDS |
| GTATTAGATCAAAGAAGTGA+GGG | 0.621648 | 7.4:-23030499 | MS.gene73391:intron |
| GGAAATGGAGGTGTTTCAAG+GGG | 0.622441 | 7.4:-23030399 | MS.gene73391:CDS |
| TTGCTGCTTGATGATTCTAG+AGG | 0.624603 | 7.4:-23032553 | MS.gene73391:CDS |
| CGCTATGTCAGATTAATGAG+TGG | 0.627187 | 7.4:-23036086 | MS.gene73391:CDS |
| ACATACATGGTACCGACAGT+TGG | 0.628854 | 7.4:-23036516 | MS.gene73391:CDS |
| TGGCAAGGTAGCAAGAGCCT+CGG | 0.630943 | 7.4:-23037508 | MS.gene73391:CDS |
| TCAAAGTAAAATCCAGAAGG+AGG | 0.631190 | 7.4:+23037298 | None:intergenic |
| GAAAATGCAAGCCAATACTT+GGG | 0.635413 | 7.4:+23034906 | None:intergenic |
| GAAGGGTCCTCTGGAAATGG+AGG | 0.635637 | 7.4:-23030411 | MS.gene73391:CDS |
| TTAGAGGGCGAAAGAAGTCA+GGG | 0.638730 | 7.4:-23035940 | MS.gene73391:CDS |
| CAAAGTAAATGGTAAAAGTG+CGG | 0.640298 | 7.4:+23030325 | None:intergenic |
| CTGTGTTGCTGACAATTGCA+AGG | 0.641022 | 7.4:-23032503 | MS.gene73391:CDS |
| ATACTCATGATGATGTTGGA+TGG | 0.641633 | 7.4:-23038752 | MS.gene73391:CDS |
| ACTTCAAAGTAAAATCCAGA+AGG | 0.641851 | 7.4:+23037295 | None:intergenic |
| TGCACAGATCGAAGAAGACA+AGG | 0.643150 | 7.4:-23031220 | MS.gene73391:intron |
| TGAAACACCTCCATTTCCAG+AGG | 0.645145 | 7.4:+23030404 | None:intergenic |
| AATGGAGGTGTTTCAAGGGG+AGG | 0.649350 | 7.4:-23030396 | MS.gene73391:CDS |
| GAATGAGCTTGTCCAACTGT+CGG | 0.650516 | 7.4:+23036504 | None:intergenic |
| GCTCATTCATTACGTGAACA+AGG | 0.651468 | 7.4:-23036489 | MS.gene73391:intron |
| CAATAAGTTATGTTCAAAAG+CGG | 0.652336 | 7.4:+23035470 | None:intergenic |
| TTTCCATGTCACAGAAACGG+TGG | 0.654844 | 7.4:-23037861 | MS.gene73391:intron |
| CGGCACAGAAAAGCAGCATG+TGG | 0.655410 | 7.4:-23035858 | MS.gene73391:CDS |
| TTGGTGGATAGAGCTATAGG+AGG | 0.655512 | 7.4:-23032988 | MS.gene73391:CDS |
| ACGTGACTACAGAACAGACT+GGG | 0.657692 | 7.4:-23033365 | MS.gene73391:CDS |
| CCCAGAGACTACACCCTGTG+AGG | 0.659344 | 7.4:+23038800 | None:intergenic |
| TGATTCTAGAGGTGTTGCAG+AGG | 0.660259 | 7.4:-23032542 | MS.gene73391:CDS |
| GTCACAGTTCATGACTCCAA+CGG | 0.662876 | 7.4:-23035029 | MS.gene73391:CDS |
| TTGGTAAAGAAGTTTCCACT+CGG | 0.667704 | 7.4:-23033676 | MS.gene73391:CDS |
| CATAGTAGTTGAAATCCGAG+TGG | 0.668936 | 7.4:+23033661 | None:intergenic |
| TCGATTAGCGCATTTATACG+AGG | 0.670614 | 7.4:-23031397 | MS.gene73391:intron |
| TGTGTTGCTGACAATTGCAA+GGG | 0.677060 | 7.4:-23032502 | MS.gene73391:CDS |
| ATTTAGCTCCCTCACCCAAG+GGG | 0.678054 | 7.4:+23031937 | None:intergenic |
| TCTACAAATACCTCAGCCAG+AGG | 0.690237 | 7.4:+23034981 | None:intergenic |
| TCACCTGAGCAGATGAACCG+AGG | 0.691260 | 7.4:+23037491 | None:intergenic |
| TCTCTCTGTAGTGACAAGTG+TGG | 0.697065 | 7.4:-23031196 | MS.gene73391:CDS |
| TGGCATGTGTATGCATGATG+AGG | 0.703361 | 7.4:-23037841 | MS.gene73391:CDS |
| TGATCCAAAAGAGTTAACTG+TGG | 0.703430 | 7.4:-23030367 | MS.gene73391:CDS |
| ATAGAGTATAACACCTCACA+GGG | 0.705260 | 7.4:-23038813 | MS.gene73391:CDS |
| TAAGTGCTAAAACCAAATGG+TGG | 0.707183 | 7.4:+23034873 | None:intergenic |
| ATTGGCAATAGGCTACAAGG+AGG | 0.782057 | 7.4:-23035816 | MS.gene73391:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 23030293 | 23038904 | 23030293 | ID=MS.gene73391 |
| chr7.4 | mRNA | 23030293 | 23038904 | 23030293 | ID=MS.gene73391.t1;Parent=MS.gene73391 |
| chr7.4 | exon | 23038704 | 23038904 | 23038704 | ID=MS.gene73391.t1.exon1;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23038704 | 23038904 | 23038704 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23038533 | 23038616 | 23038533 | ID=MS.gene73391.t1.exon2;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23038533 | 23038616 | 23038533 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23038006 | 23038094 | 23038006 | ID=MS.gene73391.t1.exon3;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23038006 | 23038094 | 23038006 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23037695 | 23037869 | 23037695 | ID=MS.gene73391.t1.exon4;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23037695 | 23037869 | 23037695 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23037495 | 23037614 | 23037495 | ID=MS.gene73391.t1.exon5;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23037495 | 23037614 | 23037495 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23037270 | 23037353 | 23037270 | ID=MS.gene73391.t1.exon6;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23037270 | 23037353 | 23037270 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23037108 | 23037179 | 23037108 | ID=MS.gene73391.t1.exon7;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23037108 | 23037179 | 23037108 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23036490 | 23036603 | 23036490 | ID=MS.gene73391.t1.exon8;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23036490 | 23036603 | 23036490 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23036270 | 23036370 | 23036270 | ID=MS.gene73391.t1.exon9;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23036270 | 23036370 | 23036270 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23036076 | 23036169 | 23036076 | ID=MS.gene73391.t1.exon10;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23036076 | 23036169 | 23036076 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23035817 | 23035984 | 23035817 | ID=MS.gene73391.t1.exon11;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23035817 | 23035984 | 23035817 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23035646 | 23035735 | 23035646 | ID=MS.gene73391.t1.exon12;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23035646 | 23035735 | 23035646 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23035430 | 23035495 | 23035430 | ID=MS.gene73391.t1.exon13;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23035430 | 23035495 | 23035430 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23035263 | 23035319 | 23035263 | ID=MS.gene73391.t1.exon14;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23035263 | 23035319 | 23035263 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23034847 | 23035066 | 23034847 | ID=MS.gene73391.t1.exon15;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23034847 | 23035066 | 23034847 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23034618 | 23034745 | 23034618 | ID=MS.gene73391.t1.exon16;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23034618 | 23034745 | 23034618 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23034374 | 23034445 | 23034374 | ID=MS.gene73391.t1.exon17;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23034374 | 23034445 | 23034374 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23034220 | 23034279 | 23034220 | ID=MS.gene73391.t1.exon18;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23034220 | 23034279 | 23034220 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23034066 | 23034137 | 23034066 | ID=MS.gene73391.t1.exon19;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23034066 | 23034137 | 23034066 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23033909 | 23033956 | 23033909 | ID=MS.gene73391.t1.exon20;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23033909 | 23033956 | 23033909 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23033607 | 23033726 | 23033607 | ID=MS.gene73391.t1.exon21;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23033607 | 23033726 | 23033607 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23033324 | 23033389 | 23033324 | ID=MS.gene73391.t1.exon22;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23033324 | 23033389 | 23033324 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23032946 | 23033058 | 23032946 | ID=MS.gene73391.t1.exon23;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23032946 | 23033058 | 23032946 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23032495 | 23032579 | 23032495 | ID=MS.gene73391.t1.exon24;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23032495 | 23032579 | 23032495 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23031878 | 23031988 | 23031878 | ID=MS.gene73391.t1.exon25;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23031878 | 23031988 | 23031878 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23031688 | 23031786 | 23031688 | ID=MS.gene73391.t1.exon26;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23031688 | 23031786 | 23031688 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23031398 | 23031445 | 23031398 | ID=MS.gene73391.t1.exon27;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23031398 | 23031445 | 23031398 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23031167 | 23031235 | 23031167 | ID=MS.gene73391.t1.exon28;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23031167 | 23031235 | 23031167 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| chr7.4 | exon | 23030293 | 23030514 | 23030293 | ID=MS.gene73391.t1.exon29;Parent=MS.gene73391.t1 |
| chr7.4 | CDS | 23030293 | 23030514 | 23030293 | ID=cds.MS.gene73391.t1;Parent=MS.gene73391.t1 |
| Gene Sequence |
| Protein sequence |
