Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033714.t1 | XP_003624501.2 | 98.4 | 1016 | 15 | 1 | 1 | 1015 | 46 | 1061 | 0.00E+00 | 2022.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033714.t1 | Q8LPJ3 | 70.9 | 1017 | 277 | 9 | 1 | 1006 | 3 | 1011 | 0.0e+00 | 1466.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033714.t1 | G7KX95 | 98.4 | 1016 | 15 | 1 | 1 | 1015 | 46 | 1061 | 0.0e+00 | 2022.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene033714 | MS.gene065393 | PPI |
| MS.gene033714 | MS.gene76352 | PPI |
| MS.gene033714 | MS.gene000897 | PPI |
| MS.gene23123 | MS.gene033714 | PPI |
| MS.gene033714 | MS.gene041467 | PPI |
| MS.gene033714 | MS.gene012130 | PPI |
| MS.gene050912 | MS.gene033714 | PPI |
| MS.gene035233 | MS.gene033714 | PPI |
| MS.gene033714 | MS.gene024280 | PPI |
| MS.gene033714 | MS.gene73389 | PPI |
| MS.gene033714 | MS.gene072503 | PPI |
| MS.gene033714 | MS.gene28495 | PPI |
| MS.gene033714 | MS.gene44227 | PPI |
| MS.gene033714 | MS.gene89676 | PPI |
| MS.gene017617 | MS.gene033714 | PPI |
| MS.gene033714 | MS.gene036585 | PPI |
| MS.gene033714 | MS.gene011927 | PPI |
| MS.gene033715 | MS.gene033714 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033714.t1 | MTR_7g084030 | 98.425 | 1016 | 15 | 1 | 1 | 1015 | 46 | 1061 | 0.0 | 2077 |
| MS.gene033714.t1 | MTR_7g084030 | 98.393 | 809 | 13 | 0 | 1 | 809 | 1 | 809 | 0.0 | 1667 |
| MS.gene033714.t1 | MTR_3g098650 | 71.471 | 999 | 276 | 4 | 14 | 1005 | 18 | 1014 | 0.0 | 1502 |
| MS.gene033714.t1 | MTR_7g084040 | 68.955 | 1005 | 306 | 3 | 6 | 1006 | 6 | 1008 | 0.0 | 1452 |
| MS.gene033714.t1 | MTR_8g075330 | 60.099 | 1010 | 389 | 8 | 6 | 1005 | 13 | 1018 | 0.0 | 1259 |
| MS.gene033714.t1 | MTR_6g008850 | 28.231 | 882 | 473 | 26 | 36 | 819 | 138 | 957 | 8.18e-80 | 283 |
| MS.gene033714.t1 | MTR_4g071680 | 27.211 | 882 | 469 | 27 | 36 | 819 | 138 | 944 | 1.60e-69 | 253 |
| MS.gene033714.t1 | MTR_3g013720 | 79.592 | 49 | 10 | 0 | 48 | 96 | 11 | 59 | 1.27e-20 | 87.0 |
| MS.gene033714.t1 | MTR_2g066850 | 65.152 | 66 | 19 | 1 | 808 | 869 | 447 | 512 | 1.03e-17 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene033714.t1 | AT5G13980 | 70.895 | 1017 | 277 | 9 | 1 | 1006 | 3 | 1011 | 0.0 | 1509 |
| MS.gene033714.t1 | AT5G13980 | 70.895 | 1017 | 277 | 9 | 1 | 1006 | 3 | 1011 | 0.0 | 1509 |
| MS.gene033714.t1 | AT3G26720 | 66.006 | 1009 | 335 | 6 | 1 | 1006 | 1 | 1004 | 0.0 | 1411 |
| MS.gene033714.t1 | AT5G13980 | 71.629 | 927 | 247 | 8 | 1 | 919 | 3 | 921 | 0.0 | 1398 |
| MS.gene033714.t1 | AT3G26720 | 65.618 | 954 | 321 | 5 | 1 | 951 | 1 | 950 | 0.0 | 1333 |
| MS.gene033714.t1 | AT3G26720 | 66.138 | 945 | 313 | 5 | 1 | 942 | 1 | 941 | 0.0 | 1330 |
| MS.gene033714.t1 | AT3G26720 | 66.306 | 923 | 304 | 5 | 1 | 920 | 1 | 919 | 0.0 | 1306 |
| MS.gene033714.t1 | AT3G26720 | 66.306 | 923 | 304 | 5 | 1 | 920 | 1 | 919 | 0.0 | 1305 |
| MS.gene033714.t1 | AT5G66150 | 58.466 | 1004 | 394 | 5 | 23 | 1005 | 33 | 1034 | 0.0 | 1221 |
| MS.gene033714.t1 | AT5G66150 | 58.507 | 1005 | 393 | 6 | 23 | 1005 | 33 | 1035 | 0.0 | 1219 |
| MS.gene033714.t1 | AT5G66150 | 56.124 | 743 | 302 | 6 | 285 | 1005 | 1 | 741 | 0.0 | 852 |
| MS.gene033714.t1 | AT5G14950 | 26.954 | 883 | 486 | 27 | 36 | 819 | 152 | 974 | 1.01e-69 | 254 |
Find 206 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAGTTACCTTTACTATTC+AGG | 0.192715 | 7.4:+22975029 | MS.gene033714:CDS |
| GTTTCTTGCATTAACATAAT+TGG | 0.198476 | 7.4:-22974813 | None:intergenic |
| ATTAATGAGTGGCTATTATT+TGG | 0.217723 | 7.4:+22973359 | MS.gene033714:CDS |
| AGCTCCACAGTTAACTCTTT+TGG | 0.222849 | 7.4:-22979074 | None:intergenic |
| CAGATCGTGCAAATGGTTTC+TGG | 0.225600 | 7.4:+22973292 | MS.gene033714:CDS |
| TGCTGTGCAGGCTTATTTAT+TGG | 0.230637 | 7.4:+22971731 | MS.gene033714:CDS |
| ACTTGTTGAAACTTTATAAC+TGG | 0.232743 | 7.4:-22973790 | None:intergenic |
| CACTCGGATTTCAACTACTA+TGG | 0.233395 | 7.4:+22975774 | MS.gene033714:CDS |
| CCTTGACATAGTAGTTTCTT+AGG | 0.253999 | 7.4:-22974476 | None:intergenic |
| CTTTACTATTCAGGGTATAA+TGG | 0.264566 | 7.4:+22975038 | MS.gene033714:CDS |
| TTCTATGGTTCATGCTCTAT+TGG | 0.267475 | 7.4:+22970866 | MS.gene033714:CDS |
| GTTACTACTGTCAAAGTAAA+TGG | 0.272153 | 7.4:-22979123 | None:intergenic |
| CATTTCGAACCTGTCTTTCA+TGG | 0.277535 | 7.4:-22975224 | None:intergenic |
| GCTGTGCAGGCTTATTTATT+GGG | 0.280320 | 7.4:+22971732 | MS.gene033714:CDS |
| CATTGTTATTATAACATTAC+AGG | 0.284184 | 7.4:+22977748 | MS.gene033714:CDS |
| TGGTTCCAACAATTCTATTC+AGG | 0.292291 | 7.4:+22970731 | MS.gene033714:CDS |
| GTTGAATCAACATCAGTTAC+TGG | 0.292971 | 7.4:+22973757 | MS.gene033714:CDS |
| TCGTAGTTTACCTTCTTTCC+TGG | 0.296348 | 7.4:-22978279 | None:intergenic |
| TCAGCTAATGAGTCTGTATT+TGG | 0.303542 | 7.4:-22973517 | None:intergenic |
| TCAATTTGCCAACCAATTCT+TGG | 0.320808 | 7.4:-22971693 | None:intergenic |
| GCAAAATGTGTTGGATTCTA+TGG | 0.320839 | 7.4:+22970851 | MS.gene033714:CDS |
| GTGTTCTTCCAGATCTTTGC+TGG | 0.324479 | 7.4:+22972091 | MS.gene033714:intron |
| TACTATGTCAAGGCATATTT+AGG | 0.326890 | 7.4:+22974486 | MS.gene033714:CDS |
| AGACTTGTTTGGAAAGTAGA+AGG | 0.327254 | 7.4:+22979008 | MS.gene033714:CDS |
| GCTAAATGGCGCCGTACTTT+TGG | 0.328700 | 7.4:+22977514 | MS.gene033714:CDS |
| GAAGTGCACCAGCCCGTTGC+TGG | 0.334798 | 7.4:+22976097 | MS.gene033714:CDS |
| ACCTCACAGGGTGTAGTCTC+TGG | 0.347973 | 7.4:+22970633 | MS.gene033714:CDS |
| TGGAGAAGAAAAGACTTGTT+TGG | 0.356314 | 7.4:+22978997 | MS.gene033714:CDS |
| GAGAACTATGAACCTCCTTC+TGG | 0.360730 | 7.4:+22972124 | MS.gene033714:CDS |
| GTTAAGCAGCTTGTTAGTTC+GGG | 0.360901 | 7.4:+22971413 | MS.gene033714:CDS |
| TCAGTTTCTGTACCACCATT+TGG | 0.361418 | 7.4:+22974549 | MS.gene033714:CDS |
| AGATAGGAATAAACGCAAAA+AGG | 0.361623 | 7.4:+22971883 | MS.gene033714:CDS |
| AGTTAAGCAGCTTGTTAGTT+CGG | 0.361974 | 7.4:+22971412 | MS.gene033714:CDS |
| TAAGACAGAATTCTCCGTTT+TGG | 0.363313 | 7.4:+22976428 | MS.gene033714:CDS |
| AGAAGAGTCTTGAGGTTATC+TGG | 0.364575 | 7.4:+22971906 | MS.gene033714:CDS |
| TCCTGCATCAGAAGTTGAAT+TGG | 0.367889 | 7.4:+22973987 | MS.gene033714:CDS |
| TTACCAACTCCATCTTCAAT+AGG | 0.369060 | 7.4:-22975742 | None:intergenic |
| CCTTGGGTGAGGGAGCTAAA+TGG | 0.374069 | 7.4:+22977500 | MS.gene033714:CDS |
| CGAACTCCTCTTTCAGAAAT+CGG | 0.375393 | 7.4:-22971662 | None:intergenic |
| TTTATAAGATGTGTTCCATT+TGG | 0.376310 | 7.4:-22975201 | None:intergenic |
| TTGTCCTTTCAGATTAATCT+TGG | 0.387749 | 7.4:+22976387 | MS.gene033714:intron |
| CTTTGTGCAGGCAGAGGAAC+TGG | 0.389496 | 7.4:+22973711 | MS.gene033714:intron |
| TTCGATTTGACTCCAAGAAT+TGG | 0.390690 | 7.4:+22971681 | MS.gene033714:CDS |
| TGAAAATGCAAGCCAATACT+TGG | 0.393326 | 7.4:-22974529 | None:intergenic |
| AATGACCTGAATAGAATTGT+TGG | 0.398399 | 7.4:-22970736 | None:intergenic |
| ATTGTGGTTTATAACTCTCT+TGG | 0.398651 | 7.4:+22974140 | MS.gene033714:CDS |
| TTCGTCATCACTGGCTTGCT+TGG | 0.400499 | 7.4:+22973735 | MS.gene033714:CDS |
| TGGGAAGCTCAATGTTCATC+TGG | 0.400751 | 7.4:+22970653 | MS.gene033714:CDS |
| CTCTATTGGCTGATAAGAAC+AGG | 0.401356 | 7.4:+22970880 | MS.gene033714:CDS |
| TTCTATAATAATATTTCCCT+TGG | 0.402828 | 7.4:-22977471 | None:intergenic |
| ATTGGTTCGAGGAAAGAGTT+TGG | 0.408245 | 7.4:+22974005 | MS.gene033714:CDS |
| TTTAGAGGGCGAAAGAAGTC+AGG | 0.411577 | 7.4:+22973493 | MS.gene033714:CDS |
| CAATCGTTTAGCATAATCAT+TGG | 0.411610 | 7.4:-22973599 | None:intergenic |
| AGTCATGAAAAGTCTTCAAT+AGG | 0.411948 | 7.4:+22974743 | MS.gene033714:CDS |
| GTAGGATCGATTACCAAGAT+AGG | 0.415011 | 7.4:+22971867 | MS.gene033714:CDS |
| AATCAGTCCATGGATATATC+AGG | 0.417104 | 7.4:+22975369 | MS.gene033714:CDS |
| AAAGTGGAGAATATATTTCC+TGG | 0.425358 | 7.4:-22977537 | None:intergenic |
| GTTTGGACATTCTGCTGTGC+AGG | 0.429270 | 7.4:+22971719 | MS.gene033714:CDS |
| GGTTGGCAAATTGACCCGTT+TGG | 0.434705 | 7.4:+22971702 | MS.gene033714:CDS |
| GAAGGAGGTTCATAGTTCTC+AGG | 0.436622 | 7.4:-22972121 | None:intergenic |
| TGAGTTACCTTTACTATTCA+GGG | 0.438695 | 7.4:+22975030 | MS.gene033714:CDS |
| CTGGAAATGGAGGTGTTTCA+AGG | 0.438959 | 7.4:+22979036 | MS.gene033714:CDS |
| AATCACATTATGTGGACAAT+GGG | 0.443770 | 7.4:+22972871 | MS.gene033714:CDS |
| GTAGAAGGGTCCTCTGGAAA+TGG | 0.445460 | 7.4:+22979023 | MS.gene033714:CDS |
| CGTAGTTTACCTTCTTTCCT+GGG | 0.446870 | 7.4:-22978278 | None:intergenic |
| GGGTAATAATTTCCAGCAAC+GGG | 0.449669 | 7.4:-22976109 | None:intergenic |
| TATGCTAAACGATTGGCAAT+AGG | 0.452324 | 7.4:+22973607 | MS.gene033714:CDS |
| ACTCCATCTTCAATAGGTAT+AGG | 0.454189 | 7.4:-22975736 | None:intergenic |
| AAACATTTGCAGGTTATTGA+TGG | 0.459153 | 7.4:+22974378 | MS.gene033714:intron |
| GCTTATATCTTCCGTCCAAA+TGG | 0.464533 | 7.4:+22975186 | MS.gene033714:CDS |
| CATAGAAGAGAATTCCCAAA+AGG | 0.468108 | 7.4:-22970581 | None:intergenic |
| TAATTTCTGTAACAGAATGC+TGG | 0.468169 | 7.4:+22975162 | MS.gene033714:intron |
| TTTCCATATTCAGGTTATTG+TGG | 0.471363 | 7.4:+22974124 | MS.gene033714:intron |
| TGTCCTTTCAGATTAATCTT+GGG | 0.474577 | 7.4:+22976388 | MS.gene033714:intron |
| ATAACTCTCTTGGTTGGAAG+AGG | 0.474966 | 7.4:+22974150 | MS.gene033714:CDS |
| AGTTATTCAGATCGTGCAAA+TGG | 0.477887 | 7.4:+22973285 | MS.gene033714:intron |
| CATCCAAGACACCCAAGTAT+TGG | 0.478995 | 7.4:+22974517 | MS.gene033714:CDS |
| GGAACTGGTTTCGTCATCAC+TGG | 0.480083 | 7.4:+22973726 | MS.gene033714:CDS |
| CTTGTTGAAACTTTATAACT+GGG | 0.480817 | 7.4:-22973789 | None:intergenic |
| TCCTTTCAGGAACTTGATCA+AGG | 0.483430 | 7.4:+22978003 | MS.gene033714:intron |
| AGAATCTCAAATTCTACCTC+TGG | 0.484241 | 7.4:+22974437 | MS.gene033714:CDS |
| CGTGCAAATGGTTTCTGGAC+AGG | 0.485426 | 7.4:+22973297 | MS.gene033714:CDS |
| GAGCCTCGGTTCATCTGCTC+AGG | 0.488230 | 7.4:+22971940 | MS.gene033714:CDS |
| GATTTGTCCATCTTCTAAGC+TGG | 0.488233 | 7.4:-22976472 | None:intergenic |
| AGATTCTATTTCTACACCGT+TGG | 0.493375 | 7.4:-22974421 | None:intergenic |
| CTGACATAGCGTTTCAAAGC+TGG | 0.497109 | 7.4:-22973336 | None:intergenic |
| CCATTTAGCTCCCTCACCCA+AGG | 0.497452 | 7.4:-22977500 | None:intergenic |
| GCGTTTCAAAGCTGGTCTAC+TGG | 0.497765 | 7.4:-22973328 | None:intergenic |
| GTAAAAGTGCGGATTTCCAT+TGG | 0.501131 | 7.4:-22979101 | None:intergenic |
| TACCAGACAGTACAAAGAAA+AGG | 0.505652 | 7.4:+22975502 | MS.gene033714:CDS |
| AATAATTTCCAGCAACGGGC+TGG | 0.505914 | 7.4:-22976105 | None:intergenic |
| AACTGTGGAGCTTGCTCCAA+TGG | 0.506887 | 7.4:+22979085 | MS.gene033714:CDS |
| ATCCTGAAAATGTTGTTACA+TGG | 0.508095 | 7.4:-22977697 | None:intergenic |
| CTACAGAACAGACTGGGACT+TGG | 0.508692 | 7.4:+22976075 | MS.gene033714:CDS |
| CTGTGCCGGTGACTGCATCA+TGG | 0.509159 | 7.4:-22973561 | None:intergenic |
| AAGTGTATAAACTGATGATC+TGG | 0.510611 | 7.4:-22974717 | None:intergenic |
| CAATACTTGGGTGTCTTGGA+TGG | 0.512823 | 7.4:-22974516 | None:intergenic |
| GAACAGGAAATTTATCTATG+TGG | 0.515196 | 7.4:+22970896 | MS.gene033714:CDS |
| GGTGTTATACTCTATAAACT+TGG | 0.516701 | 7.4:-22970613 | None:intergenic |
| CTCGGACAAATCACATTATG+TGG | 0.518821 | 7.4:+22972863 | MS.gene033714:CDS |
| TGCACAGCAGAATGTCCAAA+CGG | 0.521779 | 7.4:-22971717 | None:intergenic |
| ACCAATTCAACTTCTGATGC+AGG | 0.522885 | 7.4:-22973988 | None:intergenic |
| TGATGCACTTCATCTAGTAT+TGG | 0.525893 | 7.4:-22975343 | None:intergenic |
| TCGGAAAAGGCTAACAAAAG+TGG | 0.525918 | 7.4:-22977553 | None:intergenic |
| TATTATAGAATAGACCCCTT+GGG | 0.533906 | 7.4:+22977484 | MS.gene033714:CDS |
| TAGAATAGACCCCTTGGGTG+AGG | 0.534403 | 7.4:+22977489 | MS.gene033714:CDS |
| AAGCCAATACTTGGGTGTCT+TGG | 0.535952 | 7.4:-22974520 | None:intergenic |
| TGGTTTATAACTCTCTTGGT+TGG | 0.536231 | 7.4:+22974144 | MS.gene033714:CDS |
| CATTTAGCTCCCTCACCCAA+GGG | 0.538619 | 7.4:-22977499 | None:intergenic |
| CATTATACCCTGAATAGTAA+AGG | 0.540784 | 7.4:-22975037 | None:intergenic |
| ATATTTCCTGGCCAAAAGTA+CGG | 0.540811 | 7.4:-22977525 | None:intergenic |
| CGTATAAATGCGCTAATCGA+AGG | 0.540840 | 7.4:-22978035 | None:intergenic |
| GGCTTGTGTGCAAAATGTGT+TGG | 0.541656 | 7.4:+22970842 | MS.gene033714:CDS |
| TCAGAAGTTGAATTGGTTCG+AGG | 0.541864 | 7.4:+22973994 | MS.gene033714:CDS |
| GTGTAAGTGCTAAAACCAAA+TGG | 0.542048 | 7.4:-22974564 | None:intergenic |
| TGGAAAGTAGAAGGGTCCTC+TGG | 0.542542 | 7.4:+22979017 | MS.gene033714:CDS |
| AAATCACATTATGTGGACAA+TGG | 0.545205 | 7.4:+22972870 | MS.gene033714:CDS |
| TGGAAATGGAGGTGTTTCAA+GGG | 0.545678 | 7.4:+22979037 | MS.gene033714:CDS |
| TCCTGAAAATGTTGTTACAT+GGG | 0.545787 | 7.4:-22977696 | None:intergenic |
| ACTGTTGATCAGTACTATGT+TGG | 0.549819 | 7.4:+22970711 | MS.gene033714:CDS |
| ATTTGACTCCAAGAATTGGT+TGG | 0.549978 | 7.4:+22971685 | MS.gene033714:CDS |
| GCTTATCTGCAAATCAAGAA+AGG | 0.550208 | 7.4:+22978967 | MS.gene033714:CDS |
| GCACAGCAGAATGTCCAAAC+GGG | 0.551546 | 7.4:-22971716 | None:intergenic |
| TGGACACCGATTTCTGAAAG+AGG | 0.552492 | 7.4:+22971656 | MS.gene033714:CDS |
| TCTTATAAACCATGAAAGAC+AGG | 0.555377 | 7.4:+22975215 | MS.gene033714:CDS |
| TGGGTAATAATTTCCAGCAA+CGG | 0.556408 | 7.4:-22976110 | None:intergenic |
| AAGAAATCGTCAGTCTTGAC+TGG | 0.557536 | 7.4:-22973161 | None:intergenic |
| TAAGATGTGTTCCATTTGGA+CGG | 0.558123 | 7.4:-22975197 | None:intergenic |
| TCAAATTCTACCTCTGGCTG+AGG | 0.558671 | 7.4:+22974443 | MS.gene033714:CDS |
| CAATGATTATGCTAAACGAT+TGG | 0.559018 | 7.4:+22973600 | MS.gene033714:CDS |
| ATAGAAGAGAATTCCCAAAA+GGG | 0.559727 | 7.4:-22970580 | None:intergenic |
| GTTCCAGTGACTGTTCTCCA+TGG | 0.560750 | 7.4:+22975319 | MS.gene033714:CDS |
| TTATTATAGAATAGACCCCT+TGG | 0.561110 | 7.4:+22977483 | MS.gene033714:CDS |
| TATAGAGTATAACACCTCAC+AGG | 0.564100 | 7.4:+22970620 | MS.gene033714:CDS |
| GGTCCTATACCTATTGAAGA+TGG | 0.564137 | 7.4:+22975733 | MS.gene033714:CDS |
| AAATCGAGTTGATGCTCCAC+AGG | 0.565718 | 7.4:+22976490 | MS.gene033714:CDS |
| GGAGGATCCAGCTTAGAAGA+TGG | 0.568313 | 7.4:+22976465 | MS.gene033714:CDS |
| GGTCCATGGAGAACAGTCAC+TGG | 0.569176 | 7.4:-22975322 | None:intergenic |
| ATGATTGATCAGACTACACT+TGG | 0.569418 | 7.4:+22971636 | MS.gene033714:CDS |
| AAGGAGGTTCATAGTTCTCA+GGG | 0.570158 | 7.4:-22972120 | None:intergenic |
| TTGGGAATTCTCTTCTATGG+AGG | 0.570457 | 7.4:+22970585 | MS.gene033714:CDS |
| CCTCACAGGGTGTAGTCTCT+GGG | 0.571763 | 7.4:+22970634 | MS.gene033714:CDS |
| ATACCTATTGAAGATGGAGT+TGG | 0.572453 | 7.4:+22975739 | MS.gene033714:CDS |
| AGAATAGACCCCTTGGGTGA+GGG | 0.574887 | 7.4:+22977490 | MS.gene033714:CDS |
| AGTCTTGAGGTTATCTGGCA+AGG | 0.579058 | 7.4:+22971911 | MS.gene033714:CDS |
| ACGATTGGCAATAGGCTACA+AGG | 0.579394 | 7.4:+22973615 | MS.gene033714:CDS |
| GAAAAGTCTTCAATAGGTCA+AGG | 0.580083 | 7.4:+22974749 | MS.gene033714:CDS |
| GACTTGTTTGGAAAGTAGAA+GGG | 0.584116 | 7.4:+22979009 | MS.gene033714:CDS |
| GCTCATACTCATGATGATGT+TGG | 0.588207 | 7.4:+22970678 | MS.gene033714:CDS |
| CAACACCATGATGCAGTCAC+CGG | 0.591654 | 7.4:+22973556 | MS.gene033714:CDS |
| TGCATCAACGAATCAGTCCA+TGG | 0.592263 | 7.4:+22975359 | MS.gene033714:CDS |
| TTTGCATCTGTATATATGGA+GGG | 0.592290 | 7.4:-22973116 | None:intergenic |
| CTTCATCTAGTATTGGTCCA+TGG | 0.596258 | 7.4:-22975336 | None:intergenic |
| TACGTGACTACAGAACAGAC+TGG | 0.596442 | 7.4:+22976068 | MS.gene033714:CDS |
| TATAGCTCTATCCACCAAAA+CGG | 0.596879 | 7.4:-22976442 | None:intergenic |
| GGTAGGATGATAAAGATGAC+TGG | 0.599141 | 7.4:+22977666 | MS.gene033714:intron |
| CCTTTCAGGAACTTGATCAA+GGG | 0.599608 | 7.4:+22978004 | MS.gene033714:intron |
| CAAAGCACCTGATATATCCA+TGG | 0.601939 | 7.4:-22975376 | None:intergenic |
| GGTATTAGATCAAAGAAGTG+AGG | 0.605616 | 7.4:+22978937 | MS.gene033714:intron |
| TCAGGAACTTGATCAAGGGA+CGG | 0.606166 | 7.4:+22978008 | MS.gene033714:intron |
| AAATCAAGAAAGGACAGAGA+TGG | 0.607796 | 7.4:+22978977 | MS.gene033714:CDS |
| TTATGTTAATGCAAGAAACA+TGG | 0.614150 | 7.4:+22974817 | MS.gene033714:CDS |
| TGTATAAACTGATGATCTGG+TGG | 0.614284 | 7.4:-22974714 | None:intergenic |
| CCTAAGAAACTACTATGTCA+AGG | 0.616978 | 7.4:+22974476 | MS.gene033714:CDS |
| AATATGCTGCAAATGAGTCA+TGG | 0.618901 | 7.4:+22973138 | MS.gene033714:CDS |
| AGTATCAATATGCACATACA+TGG | 0.619070 | 7.4:+22972905 | MS.gene033714:CDS |
| GTATTAGATCAAAGAAGTGA+GGG | 0.621648 | 7.4:+22978938 | MS.gene033714:intron |
| GGAAATGGAGGTGTTTCAAG+GGG | 0.622441 | 7.4:+22979038 | MS.gene033714:CDS |
| TTGCTGCTTGATGATTCTAG+AGG | 0.624603 | 7.4:+22976882 | MS.gene033714:CDS |
| CGCTATGTCAGATTAATGAG+TGG | 0.627187 | 7.4:+22973348 | MS.gene033714:CDS |
| ACATACATGGTACCGACAGT+TGG | 0.628854 | 7.4:+22972918 | MS.gene033714:CDS |
| TGGCAAGGTAGCAAGAGCCT+CGG | 0.630943 | 7.4:+22971926 | MS.gene033714:CDS |
| TCAAAGTAAAATCCAGAAGG+AGG | 0.631190 | 7.4:-22972136 | None:intergenic |
| GAAAATGCAAGCCAATACTT+GGG | 0.635413 | 7.4:-22974528 | None:intergenic |
| GAAGGGTCCTCTGGAAATGG+AGG | 0.635637 | 7.4:+22979026 | MS.gene033714:CDS |
| TTAGAGGGCGAAAGAAGTCA+GGG | 0.638730 | 7.4:+22973494 | MS.gene033714:CDS |
| CAAAGTAAATGGTAAAAGTG+CGG | 0.640298 | 7.4:-22979112 | None:intergenic |
| CTGTGTTGCTGACAATTGCA+AGG | 0.641022 | 7.4:+22976932 | MS.gene033714:CDS |
| ATACTCATGATGATGTTGGA+TGG | 0.641633 | 7.4:+22970682 | MS.gene033714:CDS |
| ACTTCAAAGTAAAATCCAGA+AGG | 0.641851 | 7.4:-22972139 | None:intergenic |
| TGCACAGATCGAAGAAGACA+AGG | 0.643150 | 7.4:+22978215 | MS.gene033714:intron |
| TGAAACACCTCCATTTCCAG+AGG | 0.645145 | 7.4:-22979033 | None:intergenic |
| AATGGAGGTGTTTCAAGGGG+AGG | 0.649350 | 7.4:+22979041 | MS.gene033714:CDS |
| GAATGAGCTTGTCCAACTGT+CGG | 0.650516 | 7.4:-22972930 | None:intergenic |
| GCTCATTCATTACGTGAACA+AGG | 0.651468 | 7.4:+22972945 | MS.gene033714:CDS |
| CAATAAGTTATGTTCAAAAG+CGG | 0.652336 | 7.4:-22973964 | None:intergenic |
| TTTCCATGTCACAGAAACGG+TGG | 0.654844 | 7.4:+22971573 | MS.gene033714:intron |
| CGGCACAGAAAAGCAGCATG+TGG | 0.655410 | 7.4:+22973576 | MS.gene033714:CDS |
| TTGGTGGATAGAGCTATAGG+AGG | 0.655512 | 7.4:+22976447 | MS.gene033714:CDS |
| ACGTGACTACAGAACAGACT+GGG | 0.657692 | 7.4:+22976069 | MS.gene033714:CDS |
| CCCAGAGACTACACCCTGTG+AGG | 0.659344 | 7.4:-22970634 | None:intergenic |
| TGATTCTAGAGGTGTTGCAG+AGG | 0.660259 | 7.4:+22976893 | MS.gene033714:CDS |
| GTCACAGTTCATGACTCCAA+CGG | 0.662876 | 7.4:+22974405 | MS.gene033714:CDS |
| TTGGTAAAGAAGTTTCCACT+CGG | 0.667704 | 7.4:+22975758 | MS.gene033714:CDS |
| CATAGTAGTTGAAATCCGAG+TGG | 0.668936 | 7.4:-22975773 | None:intergenic |
| TCGATTAGCGCATTTATACG+AGG | 0.670614 | 7.4:+22978038 | MS.gene033714:CDS |
| TGTGTTGCTGACAATTGCAA+GGG | 0.677060 | 7.4:+22976933 | MS.gene033714:CDS |
| ATTTAGCTCCCTCACCCAAG+GGG | 0.678054 | 7.4:-22977498 | None:intergenic |
| TCTACAAATACCTCAGCCAG+AGG | 0.690237 | 7.4:-22974453 | None:intergenic |
| TCACCTGAGCAGATGAACCG+AGG | 0.691260 | 7.4:-22971943 | None:intergenic |
| TCTCTCTGTAGTGACAAGTG+TGG | 0.697065 | 7.4:+22978239 | MS.gene033714:CDS |
| TGGCATGTGTATGCATGATG+AGG | 0.703361 | 7.4:+22971593 | MS.gene033714:CDS |
| TGATCCAAAAGAGTTAACTG+TGG | 0.703430 | 7.4:+22979070 | MS.gene033714:CDS |
| ATAGAGTATAACACCTCACA+GGG | 0.705260 | 7.4:+22970621 | MS.gene033714:CDS |
| TAAGTGCTAAAACCAAATGG+TGG | 0.707183 | 7.4:-22974561 | None:intergenic |
| ATTGGCAATAGGCTACAAGG+AGG | 0.782057 | 7.4:+22973618 | MS.gene033714:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 22970552 | 22979166 | 22970552 | ID=MS.gene033714 |
| chr7.4 | mRNA | 22970552 | 22979166 | 22970552 | ID=MS.gene033714.t1;Parent=MS.gene033714 |
| chr7.4 | exon | 22970552 | 22970752 | 22970552 | ID=MS.gene033714.t1.exon1;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22970552 | 22970752 | 22970552 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22970840 | 22970923 | 22970840 | ID=MS.gene033714.t1.exon2;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22970840 | 22970923 | 22970840 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22971362 | 22971450 | 22971362 | ID=MS.gene033714.t1.exon3;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22971362 | 22971450 | 22971362 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22971587 | 22971761 | 22971587 | ID=MS.gene033714.t1.exon4;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22971587 | 22971761 | 22971587 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22971842 | 22971961 | 22971842 | ID=MS.gene033714.t1.exon5;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22971842 | 22971961 | 22971842 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22972103 | 22972186 | 22972103 | ID=MS.gene033714.t1.exon6;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22972103 | 22972186 | 22972103 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22972277 | 22972348 | 22972277 | ID=MS.gene033714.t1.exon7;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22972277 | 22972348 | 22972277 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22972853 | 22972966 | 22972853 | ID=MS.gene033714.t1.exon8;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22972853 | 22972966 | 22972853 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22973086 | 22973186 | 22973086 | ID=MS.gene033714.t1.exon9;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22973086 | 22973186 | 22973086 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22973287 | 22973380 | 22973287 | ID=MS.gene033714.t1.exon10;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22973287 | 22973380 | 22973287 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22973472 | 22973639 | 22973472 | ID=MS.gene033714.t1.exon11;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22973472 | 22973639 | 22973472 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22973721 | 22973810 | 22973721 | ID=MS.gene033714.t1.exon12;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22973721 | 22973810 | 22973721 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22973961 | 22974026 | 22973961 | ID=MS.gene033714.t1.exon13;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22973961 | 22974026 | 22973961 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22974137 | 22974193 | 22974137 | ID=MS.gene033714.t1.exon14;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22974137 | 22974193 | 22974137 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22974390 | 22974609 | 22974390 | ID=MS.gene033714.t1.exon15;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22974390 | 22974609 | 22974390 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22974711 | 22974838 | 22974711 | ID=MS.gene033714.t1.exon16;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22974711 | 22974838 | 22974711 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22975011 | 22975082 | 22975011 | ID=MS.gene033714.t1.exon17;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22975011 | 22975082 | 22975011 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22975177 | 22975236 | 22975177 | ID=MS.gene033714.t1.exon18;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22975177 | 22975236 | 22975177 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22975319 | 22975390 | 22975319 | ID=MS.gene033714.t1.exon19;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22975319 | 22975390 | 22975319 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22975500 | 22975547 | 22975500 | ID=MS.gene033714.t1.exon20;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22975500 | 22975547 | 22975500 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22975730 | 22975849 | 22975730 | ID=MS.gene033714.t1.exon21;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22975730 | 22975849 | 22975730 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22976067 | 22976132 | 22976067 | ID=MS.gene033714.t1.exon22;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22976067 | 22976132 | 22976067 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22976399 | 22976511 | 22976399 | ID=MS.gene033714.t1.exon23;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22976399 | 22976511 | 22976399 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22976878 | 22976962 | 22976878 | ID=MS.gene033714.t1.exon24;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22976878 | 22976962 | 22976878 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22977469 | 22977579 | 22977469 | ID=MS.gene033714.t1.exon25;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22977469 | 22977579 | 22977469 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22977671 | 22977769 | 22977671 | ID=MS.gene033714.t1.exon26;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22977671 | 22977769 | 22977671 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22978012 | 22978059 | 22978012 | ID=MS.gene033714.t1.exon27;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22978012 | 22978059 | 22978012 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22978222 | 22978290 | 22978222 | ID=MS.gene033714.t1.exon28;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22978222 | 22978290 | 22978222 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| chr7.4 | exon | 22978945 | 22979166 | 22978945 | ID=MS.gene033714.t1.exon29;Parent=MS.gene033714.t1 |
| chr7.4 | CDS | 22978945 | 22979166 | 22978945 | ID=cds.MS.gene033714.t1;Parent=MS.gene033714.t1 |
| Gene Sequence |
| Protein sequence |
