AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene034966


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034966.t1 MTR_1g061860 97.872 658 14 0 1 658 1 658 0.0 1325
MS.gene034966.t1 MTR_7g102700 84.053 602 87 3 62 658 50 647 0.0 1044
MS.gene034966.t1 MTR_7g102700 83.582 603 89 2 62 658 50 648 0.0 1043
MS.gene034966.t1 MTR_7g102700 82.971 552 85 3 112 658 9 556 0.0 939
MS.gene034966.t1 MTR_7g102700 82.459 553 87 2 112 658 9 557 0.0 939
MS.gene034966.t1 MTR_0130s0060 67.347 49 16 0 76 124 182 230 6.24e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene034966.t1 AT1G03910 75.850 588 137 2 75 658 86 672 0.0 927
MS.gene034966.t1 AT1G03910 70.411 632 138 3 75 658 86 716 0.0 907
MS.gene034966.t1 AT2G36815 52.577 97 32 2 282 377 17 100 5.47e-21 88.6
MS.gene034966.t1 AT2G36815 53.125 96 31 2 283 377 24 106 5.61e-21 89.0

Find 157 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATGCTTGCGTAACATTT+TGG 0.170202 1.3:+44614048 None:intergenic
TTCTTGACCCTCTGCTTTAA+TGG 0.192895 1.3:+44613798 None:intergenic
TGCAATACAGGCTTGTTTAA+AGG 0.200086 1.3:-44614080 MS.gene034966:intron
AGCTCAGTATTTGGCGAAAA+AGG 0.258558 1.3:-44619282 MS.gene034966:CDS
CCCTCTGCTTTAATGGGTTC+GGG 0.271684 1.3:+44613805 None:intergenic
ACCCTCTGCTTTAATGGGTT+CGG 0.272032 1.3:+44613804 None:intergenic
ATCAGAGGGTGAAGATAAAT+TGG 0.274595 1.3:-44614008 MS.gene034966:CDS
CGCCAACCCATGTAGAATAT+TGG 0.284425 1.3:-44616340 MS.gene034966:CDS
GTTGAAATACTTTGGTTTCC+TGG 0.284593 1.3:+44612552 None:intergenic
TCTTGATGGCTCTGATGATT+TGG 0.289649 1.3:-44617411 MS.gene034966:CDS
TGCAGAATTGGAAGCTTTGC+AGG 0.295132 1.3:-44614285 MS.gene034966:CDS
TCTTGACCCTCTGCTTTAAT+GGG 0.310995 1.3:+44613799 None:intergenic
CACTCCTTCTGGTGAGTGAT+TGG 0.313594 1.3:-44614454 MS.gene034966:CDS
ATGCTATTTGTAGGTTTGTT+TGG 0.327045 1.3:-44618286 MS.gene034966:intron
TGTGTCTTGTCTACAAGGTC+TGG 0.329849 1.3:+44612424 None:intergenic
ACGTGCTCGAGCTGAGTTCC+AGG 0.339829 1.3:-44617627 MS.gene034966:CDS
AATAGCTCCCATAACCTTCA+TGG 0.340612 1.3:+44613480 None:intergenic
CTTCATGCAGGCACTCCTTC+TGG 0.341193 1.3:-44614465 MS.gene034966:intron
TTAACTGAAAATTCATCAAT+AGG 0.343796 1.3:+44618227 None:intergenic
GACTTACTTCTCATTAAGAT+TGG 0.354150 1.3:+44618924 None:intergenic
TCATCACCATGAAACAGTTC+TGG 0.358787 1.3:+44613739 None:intergenic
TTATACCCTTGTACAACCTT+TGG 0.359525 1.3:+44612463 None:intergenic
AGAGCAGCAGAGACGAATTC+AGG 0.361317 1.3:-44613554 MS.gene034966:CDS
CACCCTCTGATGGTTTCTTA+AGG 0.361872 1.3:+44614020 None:intergenic
TATTTCAACCGTGTTCATAC+TGG 0.366794 1.3:-44612538 MS.gene034966:CDS
CTGATGATAGTAGTAGTGAT+AGG 0.370578 1.3:-44619352 MS.gene034966:CDS
AAAGTGATCTCTTTGCATAT+TGG 0.373779 1.3:+44613830 None:intergenic
TGCAAAAGCTTCTTCACATC+TGG 0.376117 1.3:+44614320 None:intergenic
CTCTGGTGCAGAAGTAAATC+TGG 0.379600 1.3:-44613434 MS.gene034966:CDS
AGAGGAAATAGCTCAGTATT+TGG 0.382147 1.3:-44619291 MS.gene034966:CDS
CAGCAAAGCTTGTTGAGTAC+TGG 0.391117 1.3:-44614232 MS.gene034966:CDS
GATGAAAGCCATGAAGGTTA+TGG 0.391406 1.3:-44613488 MS.gene034966:CDS
TGATGATATCAAAATGCATT+TGG 0.392676 1.3:-44616378 MS.gene034966:CDS
GGGGAAGACACATGCAGAAT+TGG 0.400110 1.3:-44614297 MS.gene034966:CDS
AGAAAGAAGGAGAAGGAAAT+CGG 0.400976 1.3:-44619507 MS.gene034966:CDS
ATCCTTACCAAACATCTTGA+TGG 0.402365 1.3:-44617425 MS.gene034966:CDS
TCCGCATTGTAAACAAAGAA+TGG 0.405433 1.3:-44612236 MS.gene034966:CDS
TTGAAGGCTCATACTGTGTC+TGG 0.405951 1.3:-44618979 MS.gene034966:CDS
GAGCTTGTGTCTTGTCTACA+AGG 0.410873 1.3:+44612419 None:intergenic
GCCAACCCATGTAGAATATT+GGG 0.412226 1.3:-44616339 MS.gene034966:CDS
AAATGCATTTGGACTTTGAC+AGG 0.412773 1.3:-44616367 MS.gene034966:CDS
ACTCCTTCTGGTGAGTGATT+GGG 0.418323 1.3:-44614453 MS.gene034966:CDS
ATCAGAGCCATCAAGATGTT+TGG 0.429860 1.3:+44617418 None:intergenic
TACCCTTGTACAACCTTTGG+AGG 0.431571 1.3:+44612466 None:intergenic
TCAAATGACTCGAATCCATT+TGG 0.433737 1.3:-44618952 MS.gene034966:CDS
ATGAAACAGTTCTGGTGAAA+AGG 0.440946 1.3:+44613747 None:intergenic
AAATGTTGGCGCAGGTCTAT+TGG 0.444124 1.3:-44612594 MS.gene034966:intron
AGTAGAGCTCTGTCCTCTTC+AGG 0.445180 1.3:+44613697 None:intergenic
GAAAGTTGCTAAGAAATTGA+AGG 0.448557 1.3:-44618995 MS.gene034966:CDS
TGAAGAGGACAGAGCTCTAC+TGG 0.451227 1.3:-44613695 MS.gene034966:intron
TTGAAATACTTTGGTTTCCT+GGG 0.453521 1.3:+44612553 None:intergenic
TGAACACGGTTGAAATACTT+TGG 0.455750 1.3:+44612544 None:intergenic
AGCACGACATGAGGAAGAAA+TGG 0.455954 1.3:-44617848 MS.gene034966:intron
ATGAAAGCCATGAAGGTTAT+GGG 0.457579 1.3:-44613487 MS.gene034966:CDS
TGAACCATACATGGTCTTCA+AGG 0.457998 1.3:-44617375 MS.gene034966:intron
TTAACCTTGAAGACCATGTA+TGG 0.458201 1.3:+44617371 None:intergenic
GTAGTAGTGATAGGGATGGT+AGG 0.460746 1.3:-44619343 MS.gene034966:CDS
GAAATCTGAGGAGGATATTG+AGG 0.461280 1.3:-44613969 MS.gene034966:CDS
TGTTCAGCAAGCACCTCGGC+TGG 0.461619 1.3:+44614368 None:intergenic
GTGTCTTGTCTACAAGGTCT+GGG 0.462415 1.3:+44612425 None:intergenic
CCGCATTGTAAACAAAGAAT+GGG 0.467266 1.3:-44612235 MS.gene034966:CDS
AAAGAGACAGAGAGAAAGGA+TGG 0.468118 1.3:-44618195 MS.gene034966:intron
TGGGAATATTCTCACAAGAA+AGG 0.469421 1.3:-44612216 MS.gene034966:CDS
GAGACGGAGCCGACATGAAT+CGG 0.472964 1.3:-44619393 MS.gene034966:CDS
AATTTATCTTCACCCTCTGA+TGG 0.482921 1.3:+44614010 None:intergenic
CACTATGGTGACCACTCCTC+CGG 0.484550 1.3:+44619432 None:intergenic
ATTGGTGGCATGACAAATAC+AGG 0.484625 1.3:-44612576 MS.gene034966:CDS
GTTATGGGAGCTATTGAAGA+AGG 0.486560 1.3:-44613472 MS.gene034966:CDS
GGTAAGGATATCAATTGGCT+TGG 0.490758 1.3:+44617439 None:intergenic
AAATTATCTTCAGATGGAGC+AGG 0.490796 1.3:+44613514 None:intergenic
TGTTTGGTAAGGATATCAAT+TGG 0.493901 1.3:+44617434 None:intergenic
ATTGAGCGTGATGTTGTTCA+AGG 0.501715 1.3:-44618254 MS.gene034966:CDS
ATCTCAAAATTATCTTCAGA+TGG 0.502531 1.3:+44613508 None:intergenic
CCTTGTACAACCTTTGGAGG+TGG 0.503514 1.3:+44612469 None:intergenic
CCACCTCCAAAGGTTGTACA+AGG 0.506231 1.3:-44612469 MS.gene034966:CDS
TTAAGATTGGAATCACCAAA+TGG 0.507057 1.3:+44618937 None:intergenic
GAAGAAGTAGAAGATGAGGC+TGG 0.507844 1.3:-44613772 MS.gene034966:CDS
TCCTTCTCAATAGTGTAAGT+TGG 0.508185 1.3:+44612397 None:intergenic
AGCAAAGCTTGTTGAGTACT+GGG 0.510191 1.3:-44614231 MS.gene034966:CDS
AGGTGAAGAAGTAGAAGATG+AGG 0.510258 1.3:-44613776 MS.gene034966:CDS
AAGATGCAATTGATCGAGCT+AGG 0.518701 1.3:-44614409 MS.gene034966:CDS
TCGAGCTGAGTTCCAGGACT+GGG 0.522136 1.3:-44617621 MS.gene034966:CDS
CCAGAAATTATCTGCGGTAG+CGG 0.525395 1.3:+44612136 None:intergenic
GGCATGACAAATACAGGCCC+AGG 0.525776 1.3:-44612570 MS.gene034966:CDS
CTCGAGCTGAGTTCCAGGAC+TGG 0.526610 1.3:-44617622 MS.gene034966:CDS
AATGCAGGCGGAAATTGAAA+AGG 0.529839 1.3:-44617905 MS.gene034966:intron
CCGATGATTCCGATAGAATC+CGG 0.534725 1.3:-44619451 MS.gene034966:CDS
ACCACTCCTCCGGATTCTAT+CGG 0.536244 1.3:+44619442 None:intergenic
AGAAGTAAATCTGGATTCAC+AGG 0.541558 1.3:-44613425 MS.gene034966:intron
GGGTTTGACAGTGAATGAAA+TGG 0.542791 1.3:-44616411 MS.gene034966:CDS
TCTGTGACCGCCGATCACTA+TGG 0.542891 1.3:+44619417 None:intergenic
CTTCGTATGGTGGCCCTGCA+TGG 0.548737 1.3:+44612341 None:intergenic
TGATGATAGTAGTAGTGATA+GGG 0.552104 1.3:-44619351 MS.gene034966:CDS
CTCAAGGAAAATTACTGAAG+AGG 0.557543 1.3:-44619309 MS.gene034966:CDS
GAATGGGTAGGAAAGAAAGA+AGG 0.558466 1.3:-44619520 MS.gene034966:CDS
AGAAATAAATGAACCATACA+TGG 0.559048 1.3:-44617384 MS.gene034966:CDS
ATACCTCCCAATATTCTACA+TGG 0.559393 1.3:+44616333 None:intergenic
TCCCAATATTCTACATGGGT+TGG 0.568443 1.3:+44616338 None:intergenic
CCGGATTCTATCGGAATCAT+CGG 0.570818 1.3:+44619451 None:intergenic
AGCCATCAAGATGTTTGGTA+AGG 0.571050 1.3:+44617423 None:intergenic
ATTAAAGCAGAGGGTCAAGA+AGG 0.580470 1.3:-44613796 MS.gene034966:CDS
AGACTTACAATGTCTTCGTA+TGG 0.580822 1.3:+44612328 None:intergenic
ATTGAGAAGGATGGCAGCAA+TGG 0.582219 1.3:-44612385 MS.gene034966:CDS
TCAGCAAGCACCTCGGCTGG+AGG 0.583261 1.3:+44614371 None:intergenic
GAAATTATCTGCGGTAGCGG+TGG 0.585724 1.3:+44612139 None:intergenic
CCCGAACCCATTAAAGCAGA+GGG 0.588808 1.3:-44613805 MS.gene034966:CDS
ATTGAGTCAGAAATGCGTAC+TGG 0.589102 1.3:-44614257 MS.gene034966:CDS
CCCATTCTTTGTTTACAATG+CGG 0.589870 1.3:+44612235 None:intergenic
TCCGATAGAATCCGGAGGAG+TGG 0.590097 1.3:-44619443 MS.gene034966:CDS
CTGAGAAGAATAGAATGGGT+AGG 0.591313 1.3:-44619532 None:intergenic
TTACCTTGGCTTTATATATG+CGG 0.592230 1.3:+44614189 None:intergenic
ATCGGCGGTCACAGAGGAGA+CGG 0.593716 1.3:-44619409 MS.gene034966:CDS
TCCCGAACCCATTAAAGCAG+AGG 0.593821 1.3:-44613806 MS.gene034966:CDS
TGCATCATAAGATTCCATGC+AGG 0.594356 1.3:-44612355 MS.gene034966:CDS
ATTGATCGAGCTAGGGTGCG+TGG 0.595446 1.3:-44614401 MS.gene034966:CDS
ATATTCTACATGGGTTGGCG+TGG 0.603561 1.3:+44616343 None:intergenic
GTAGGAAAGAAAGAAGGAGA+AGG 0.603835 1.3:-44619514 MS.gene034966:CDS
GCATCATAAGATTCCATGCA+GGG 0.604220 1.3:-44612354 MS.gene034966:CDS
GATAGTAGTAGTGATAGGGA+TGG 0.605108 1.3:-44619347 MS.gene034966:CDS
TGTTGGCGCAGGTCTATTGG+TGG 0.605871 1.3:-44612591 MS.gene034966:intron
CTTACAATGTCTTCGTATGG+TGG 0.608002 1.3:+44612331 None:intergenic
AGATGCAATTGATCGAGCTA+GGG 0.609364 1.3:-44614408 MS.gene034966:CDS
ACTTACACTATTGAGAAGGA+TGG 0.610559 1.3:-44612394 MS.gene034966:CDS
GTTTCATGGTGATGAAAATG+AGG 0.610771 1.3:-44613731 MS.gene034966:CDS
TGGAGAAGAACCTCCAGCCG+AGG 0.612324 1.3:-44614381 MS.gene034966:CDS
TCATGACAATCCACCTCCAA+AGG 0.613499 1.3:-44612479 MS.gene034966:CDS
GAGACGAATTCAGGAAGCAA+TGG 0.614187 1.3:-44613545 MS.gene034966:CDS
CCTTGGCTTTATATATGCGG+AGG 0.616946 1.3:+44614192 None:intergenic
AAGAAGTAGAAGATGAGGCT+GGG 0.617278 1.3:-44613771 MS.gene034966:CDS
TCCAACTTACACTATTGAGA+AGG 0.618655 1.3:-44612398 MS.gene034966:CDS
ACTCCCAATCACTCACCAGA+AGG 0.619083 1.3:+44614450 None:intergenic
CGCCTTAAGAAACCATCAGA+GGG 0.619195 1.3:-44614022 MS.gene034966:CDS
GTAGGAAGAGAAAGTCCTCA+AGG 0.620517 1.3:-44619325 MS.gene034966:CDS
CCTCCGCATATATAAAGCCA+AGG 0.624228 1.3:-44614192 MS.gene034966:intron
AATGCATTTGGACTTTGACA+GGG 0.628278 1.3:-44616366 MS.gene034966:CDS
GGAGTGGTCACCATAGTGAT+CGG 0.640226 1.3:-44619427 MS.gene034966:CDS
ACTTGAGAAAGCACGACATG+AGG 0.644679 1.3:-44617857 MS.gene034966:CDS
GGAAGCTATTGATCCTGAAG+AGG 0.658125 1.3:-44613710 MS.gene034966:CDS
TGCTCATGTTATGAAATCTG+AGG 0.658528 1.3:-44613981 MS.gene034966:CDS
TTTAAGTGCACATTTGAACG+TGG 0.660103 1.3:-44612192 MS.gene034966:CDS
TACCTCCCAATATTCTACAT+GGG 0.662886 1.3:+44616334 None:intergenic
GAGCCGACATGAATCGGACT+CGG 0.665866 1.3:-44619387 MS.gene034966:CDS
TCATGTTATGAAATCTGAGG+AGG 0.666704 1.3:-44613978 MS.gene034966:CDS
GTGTTCATACTGGATATGAG+TGG 0.672306 1.3:-44612528 MS.gene034966:CDS
TATCCGAGTCCGATTCATGT+CGG 0.677662 1.3:+44619384 None:intergenic
GGATTGCGAAGAAGTTGACT+CGG 0.678197 1.3:+44619472 None:intergenic
ATAGTGATCGGCGGTCACAG+AGG 0.679327 1.3:-44619415 MS.gene034966:CDS
AACCCATGTAGAATATTGGG+AGG 0.679555 1.3:-44616336 MS.gene034966:intron
ACGCCTTAAGAAACCATCAG+AGG 0.683028 1.3:-44614023 MS.gene034966:CDS
TCTGAAATTAGATTGCGTGA+AGG 0.695601 1.3:-44617467 MS.gene034966:CDS
CACCTCCAAAGGTTGTACAA+GGG 0.704703 1.3:-44612468 MS.gene034966:CDS
GTGGTCACCATAGTGATCGG+CGG 0.706810 1.3:-44619424 MS.gene034966:CDS
ACTCATATCCAGTATGAACA+CGG 0.712518 1.3:+44612530 None:intergenic
ATGATTCCGATAGAATCCGG+AGG 0.713791 1.3:-44619448 MS.gene034966:CDS
GAGGTGCTTGCTGAACAGAG+AGG 0.735663 1.3:-44614362 MS.gene034966:CDS
TCTCTGTTCAGCAAGCACCT+CGG 0.736566 1.3:+44614364 None:intergenic
AGAGTGCCAGAAATTATCTG+CGG 0.744813 1.3:+44612130 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.3 gene 44612143 44619540 44612143 ID=MS.gene034966
chr1.3 mRNA 44612143 44619540 44612143 ID=MS.gene034966.t1;Parent=MS.gene034966
chr1.3 exon 44619271 44619540 44619271 ID=MS.gene034966.t1.exon1;Parent=MS.gene034966.t1
chr1.3 CDS 44619271 44619540 44619271 ID=cds.MS.gene034966.t1;Parent=MS.gene034966.t1
chr1.3 exon 44618931 44619022 44618931 ID=MS.gene034966.t1.exon2;Parent=MS.gene034966.t1
chr1.3 CDS 44618931 44619022 44618931 ID=cds.MS.gene034966.t1;Parent=MS.gene034966.t1
chr1.3 exon 44618196 44618295 44618196 ID=MS.gene034966.t1.exon3;Parent=MS.gene034966.t1
chr1.3 CDS 44618196 44618295 44618196 ID=cds.MS.gene034966.t1;Parent=MS.gene034966.t1
chr1.3 exon 44617849 44617920 44617849 ID=MS.gene034966.t1.exon4;Parent=MS.gene034966.t1
chr1.3 CDS 44617849 44617920 44617849 ID=cds.MS.gene034966.t1;Parent=MS.gene034966.t1
chr1.3 exon 44617604 44617666 44617604 ID=MS.gene034966.t1.exon5;Parent=MS.gene034966.t1
chr1.3 CDS 44617604 44617666 44617604 ID=cds.MS.gene034966.t1;Parent=MS.gene034966.t1
chr1.3 exon 44617376 44617516 44617376 ID=MS.gene034966.t1.exon6;Parent=MS.gene034966.t1
chr1.3 CDS 44617376 44617516 44617376 ID=cds.MS.gene034966.t1;Parent=MS.gene034966.t1
chr1.3 exon 44616337 44616432 44616337 ID=MS.gene034966.t1.exon7;Parent=MS.gene034966.t1
chr1.3 CDS 44616337 44616432 44616337 ID=cds.MS.gene034966.t1;Parent=MS.gene034966.t1
chr1.3 exon 44614193 44614477 44614193 ID=MS.gene034966.t1.exon8;Parent=MS.gene034966.t1
chr1.3 CDS 44614193 44614477 44614193 ID=cds.MS.gene034966.t1;Parent=MS.gene034966.t1
chr1.3 exon 44613957 44614092 44613957 ID=MS.gene034966.t1.exon9;Parent=MS.gene034966.t1
chr1.3 CDS 44613957 44614092 44613957 ID=cds.MS.gene034966.t1;Parent=MS.gene034966.t1
chr1.3 exon 44613696 44613853 44613696 ID=MS.gene034966.t1.exon10;Parent=MS.gene034966.t1
chr1.3 CDS 44613696 44613853 44613696 ID=cds.MS.gene034966.t1;Parent=MS.gene034966.t1
chr1.3 exon 44613426 44613602 44613426 ID=MS.gene034966.t1.exon11;Parent=MS.gene034966.t1
chr1.3 CDS 44613426 44613602 44613426 ID=cds.MS.gene034966.t1;Parent=MS.gene034966.t1
chr1.3 exon 44612336 44612602 44612336 ID=MS.gene034966.t1.exon12;Parent=MS.gene034966.t1
chr1.3 CDS 44612336 44612602 44612336 ID=cds.MS.gene034966.t1;Parent=MS.gene034966.t1
chr1.3 exon 44612143 44612262 44612143 ID=MS.gene034966.t1.exon13;Parent=MS.gene034966.t1
chr1.3 CDS 44612143 44612262 44612143 ID=cds.MS.gene034966.t1;Parent=MS.gene034966.t1
Gene Sequence

>MS.gene034966

ATGGGTAGGAAAGAAAGAAGGAGAAGGAAATCGGATGATTCTGCATCCGAGTCAACTTCTTCGCAATCCGATGATTCCGATAGAATCCGGAGGAGTGGTCACCATAGTGATCGGCGGTCACAGAGGAGACGGAGCCGACATGAATCGGACTCGGATAATTCTACTTCTGATGATAGTAGTAGTGATAGGGATGGTAGGAAGAGAAAGTCCTCAAGGAAAATTACTGAAGAGGAAATAGCTCAGTATTTGGCGAAAAAGGCGCAGAGAAAGGTTTGAATTTGACATATTTGATTAGAGTTTAATTTTGATATACTGTCGATGGAAAAATTTTTACATTGTCGGTGAATCACAATTAATCATATGTGTGACTTTAGAAGTAGTTATTATGATTGAAGTCAAACGTTTTTTTTTTTTAATGATCTGGAGGTGTATATGAATTAAATCGATTGTGTTTTCATGAATTGAATTGGTTTAAAGGGTGTGTTTGATGTTGAATTGTTCTTTGGTTTTGTGTTCAGGCGTTGAAAGTTGCTAAGAAATTGAAGGCTCATACTGTGTCTGGATATTCAAATGACTCGAATCCATTTGGTGATTCCAATCTTAATGAGAAGTAAGTCCCTCTCTTCTCCCTAATTTTTTTCTGTCTTGTGTTGTAATACATCAACTTAGTTCATGTTGTTTACCCGAAGAAATATAATTTTCAGATATGTATTGGTACCTCATATGCAGTATGCATGCATATACTATGTAGTTCAAAGAAACTTTATTTTTGTGGAGAGGGTAGTGGTAGGCACTAGGTAGTTATGGAGTTTAAATGTGAGTATATGTGTAAATATAAATATGGTACTTCTGAAGAAAAAAACAAGTTAATTATTGGTTGAGATTCCTCCCTATTGCTGGTTGCTGAATAAGTTTATTTCGGTGGACTGTTGACCAAGAAAAAAATTGAATAACCTTGGAACGAGTATTAATCATTGAAGTTCATGATGTTGGTTGCTACTAAGCTTTTAGTTTTTTCGTTTGGAGGGTGGGATTAATATTTAGCTTTAGCAGCAGTTGTTCTTAGATAATCTCCTTTTCATTTTTTGCTGTTTTATTTTGTTCCGCTAAGCTTGCAAATTTATTGACATTGTTATTTTCTAGAAGCGGTGACAAGCTTGTCTGTATAGAAATTAATGTATTATTATATTAGTAGTTGAGTGATGCTTACCTTCATCATCTTATTTACGAACATGCTATTTGTAGGTTTGTTTGGCGTAAGAAGATTGAGCGTGATGTTGTTCAAGGTGTGCCTATTGATGAATTTTCAGTTAAAGCTGAGAAAAAGAGACAGAGAGAAAGGATGGTATGCAATTTTCTCCAAAAAATGTTTTTGGATGTTAGGGACATATGCATATAGACTTTGACTACATTATGATTTTACAACATTTTGGATGCTGCCAACTTGCCACTACCAACTAGTTGTTTTGTTGGCATGACTGGATATTTCACTTGCTTCTTGTAGCAATATCCTTCATACACCCCATCCCCCGGGTTATTGATTATGATGATGTTGTCAAACTAAACAATCAAACTTCCCATCTACCATTTGACTAATTTCTTGTTAAAATTATAATGCAGGCGGAAATTGAAAAGGTGAAAAAACGAAGAGAAGAGAGGGCACTTGAGAAAGCACGACATGAGGAAGAAATGGTAAGTCTGTCCATTCTTATAACTTATTATTGGTTGTCTTTTTTATGCTAGAAGCGAAATTACGTTCTGGGTACCATCTGCCTGTCTCGGCTATATTCTTTTATGATCTGCCAGTTATTCCCAAACCTTTGGTGCATAAACTATTTTTTTTATTTTGAATTTATACAAATTGTCTCTCACAGGCATTGTTAGCTAGAGAACGTGCTCGAGCTGAGTTCCAGGACTGGGAAAAAAGAGAAGTGGAGGTATGGCTGCTTGAATGGCTTCCATTTGTTGTTATATCAAATAAAATGGTATTGGTAATCTGATGATTAAAACAATTTTGTATGCAGTTTCATTTTGATCAAAGCAAGTTTAGGTCTGAAATTAGATTGCGTGAAGGACGTGCCAAGCCAATTGATATCCTTACCAAACATCTTGATGGCTCTGATGATTTGGATATAGAAATAAATGAACCATACATGGTCTTCAAGGTTAATATTTGGCTTTATGATACCAATATTATGAGAATAAAGAACATGCACTGACAGTGTAAACCTAACTTTAGAGTGTCATCCAATCAAATTGCATCTTTTAGCCATGTCATAAAAAATTAATTATACATAAATAAAAAATAATACCATTTCAACTTTTCTACTCAGATCATGGTTTCTATTCCTCCCATGTCTTCGACCCACGACTGCATCAATCCATCTTCTCCATGCAATATCCTTTTATCTAATACTTTTTAACTTTATTATGATTCTATCATCTTCAATTGATCCTTTTGCATGAGTTTCTAATTTCTAATAATTTGTTCATACAATATTGGGTGAATGCATCTACTTTTTCTGGAAAGTTTAAGTACTCCTCTAACATCAACAACCATGAAGGCAGTGTATGGCAACTGCTTTTGTCAGCATCGATACAAACATTTCCTTCATCGCACCAAAATCCACAACTGCCATGACCACAATTTCTGTCACTCAGCGATGCTATCACTCATACTAAACGCTCTCTGCGGTAACGCCGTTGTCGTCACAGTGCTGCTGTACTACCACCTCACCCGTTTTCTTCACTGCTTTCCAACTGCAGTGATGGACCGAGTGAGTTAAAGATAGAAAGTTGCAGCAGATGGTGTTCAATCTGGTTTGTATAGAGAGGGGGAATGGAAACCGAAAACTATGATTTATTTAATAAATGACATGGCAAAATTATGAAATTAGATTGGATGACTGTGTAAAACAACTTTACACTGTCAGTGCACTACCTTTAAACTCATGTTTCTTTTCCTTTAACTGTTGTAAATTATAACTATAATGTAACACAGTTCTCTAAAACTTATCAAACCCTTTCATTAGCATGACTAAATATTTCTAGTTTTAAACGTCAATATTGGTGGACAAGTTACATAATGATTTGATATTTATGGTGCAGGGTTTGACAGTGAATGAAATGGAAGAGCTCCGTGATGATATCAAAATGCATTTGGACTTTGACAGGGCCACGCCAACCCATGTAGAATATTGGGAGGTATCTTCCTTTTTCCATGGCTTGTTTAGTTACATCATACTTCAATAGTAAAATTATGGAAATTGTCTAAAGATTAAGAGGAAATATCATGCATTTGTTCTTATATATTGTTGTATACTCTTGGAATTTGGGCTTTAGACCTAATTCAACCCTACAAAACCAACTTCTAAGGTGAGGACGGCTTAAGCCTTATTTGCTCTAATCTATAGTTGATGTCTCAGGTGGGAACATCTAATACGTGGAGTAATGTGGGTGGAATACATGGATCTCAACACGCCCATGTCTGGACATCTATAGCGTGAACATTTGCACATGGTATAACTAAGATTGAGGCCCAATAACAAACCTGTGATCTAGGATGGACTCTAATACCATCTTAGAATTAGAGCTTTAGGCCCAACTCAACCTCGCAAAACCGGTTTATTCAACAAAGAAAAACCTCACAAAACTGGCTTGTAAGGTGAGGGTTGTCCAAGGCCAAGCCTTGTAAGCACTAGTCTCTAGTTGATGTTGAACTCTCAAATCTCGACACCCGCCTCAGGCCTAGGATTTGACACCTGAAGCGTGGGCTAAGGCAGGTGGAATAATAGGGATCTCAACAGATACAATCATGCTAAATAATTGATATAGTTTTGAATTTAAACACTTTGGGAATAGCATTGGAATAATACCTTTTAATCATTTAGTTTTAATTTTTAAAAGTGCACCAGTACAATATCATCTATGCATTTCTTAGTGCCATTAAATTGAAAAAACTATTTGTGATGCTATGACCTCATACAAAGTATTTAAAATTGGTTTTTGCATGAAAAAATTATTCCTTTTTTTATTTGATGTGGTGTAGCGAAGACTAATGTAGTGATATTGGAGAAATCAAAAGGATTTGTTCATGATTTTCATTGATTTTGAAAAGGCATACAGTGGTTTTCTTTAAAAGGTTAAAATTGTTTAGATTGTTTATGCTAGAGTACTCTCAGATATATGTGAGGGGGTCACGGTTAATGCTACGAAACCATATGGGGCTACAAAAGATTTTCCCGTAACTAAAGATTTATCAGTTTATCTTGGTTTTAGGTCTTTTACCGCTTATCGTTTTATCCTGGTTTTGCATATCCTAGAGACAGTGCCATTGTTCATGCTTTTTGCTTATGATTTGGTCATTGGTAAAAAAGTCAAGAAAATAAATAAATGGAAAGATAGAGACATGAATACAAACCATGGAAATGTATGGTTTTAAGTATAAGTAAAACATATTATGTGTACCAACACTTAGTAGAAGGCTCACAAAGATCAGAGACAGAAATTGGAAAACATATCTTACCTCAAATATCATGATTTGGGTACCTTGGGTTCATCATAAAAAAATAATGGGGAGATAGGGAGATGTAACCTGTAGGATACAACTAGGAGGGTGAGTTAATCGGAGAGTTGGTTTGGGTGTGTGATTTGTGATAGAGAAATGTTACTCAAGTTTTTTTTTTTTTGCCCTTTAAAGCATAAGACCAGCCATGCTATATAGGGTTGAATGTTGGGTGATAAACAGCAAATAAGAAGTATGGTCAATGTTGTGGAGGTGCAAATATTAGAGTGCACAAATGATCATTTATGTATGTTTTGTCTCTCATGCAACTATGTATGTCTTATTATGCAACTATTGTGATCGTCATTATGCATCTTATGCACTGAAGTCCCAATGAATTAGTTGTCTTCTTAATATTCTCCTCTTTTGTTTCAGTTAACTTATATGGCCATTGTGGGTTGCTTCCTTAACATGTAATGTTATGCATCTTGGCACTTAATTAGTCATTTCATAATTCATGTTCGGAGTTGAAAATCTCTTGGTCAATATCTTCATGCAGGCACTCCTTCTGGTGAGTGATTGGGAGTTAGCTGAAGCTAGAAAAAAAGATGCAATTGATCGAGCTAGGGTGCGTGGAGAAGAACCTCCAGCCGAGGTGCTTGCTGAACAGAGAGGTCTGCATAACAGTGTTGAACCAGATGTGAAGAAGCTTTTGCAGGGGAAGACACATGCAGAATTGGAAGCTTTGCAGGCGCATATTGAGTCAGAAATGCGTACTGGTGCAGCAAAGCTTGTTGAGTACTGGGAGACTGTTTTAAAGTACCTCCGCATATATAAAGCCAAGGTAATCTCTTAACATTATTATTTTTTTTTATTTTTTTTGTATTTTATGTTACATGCCATAACTTAATGGATTGTTCGCTCCATTATTTGCTGCAATACAGGCTTGTTTAAAGGAAATTCATGCCAAAATGTTACGCAAGCATTTGCTACGCCTTAAGAAACCATCAGAGGGTGAAGATAAATTGGAAGATGCTCATGTTATGAAATCTGAGGAGGATATTGAGGATTATGTTAAATGTATAACTTTCTTGTCATTATTTAATTATTTGTAAAATATTGACTTTTGGACACTTCCTATATCCAAAACTTCATTTTGATTTTCCTGATATTTTTTGTGCAGTCCAATATGCAAAGAGATCACTTTCTCCCGAACCCATTAAAGCAGAGGGTCAAGAAGGTGAAGAAGTAGAAGATGAGGCTGGGTCCTTTTCACCAGAACTGTTTCATGGTGATGAAAATGAGGAAGCTATTGATCCTGAAGAGGACAGAGCTCTACTGGTAAATCTTATTTCACACTTAATCTAATGATCTTGTGTCTGTGAGTTTGTGTTAAGTATATAGGCTAACTTGTCCACAATGGTACATTCACAGGAACAAAAACGTTTGTCTGTAAAAGAAGAGCAGCAGAGACGAATTCAGGAAGCAATGGCATCAAAGCCTGCTCCATCTGAAGATAATTTTGAGATGAAAGCCATGAAGGTTATGGGAGCTATTGAAGAAGGAGATGTAATTTTTGGCTCTGGTGCAGAAGTAAATCTGGATTCACAGGTATCTTGTCTTGTCATTTGTATGATTTTCACACTTGGTAAAATGGGATCAAATGCTTGTTATTTTCCATGATTCTAGTTTTAATGTTAATTATTATTAGATGGAAAATATATACAACAACAACAACAGCCAAGCCTTATCCCACTAAGTGGGGTCGGCTACATGGATCAAATGACGCCATAGTGTTCTATCAAAAACCATATTTGGATCCAACTCATTGACCTCTAAATCTTTTCTAATGGTTTCTCGAATGGTTTTCTTGGGTCTTCCTCTACCTCTTTTAACCTGACTCTCCGCCATTTGATCTACTCTTCTTACAACGGCATCTACGGGTCTTCTCTCTACATGTCCAAACCATCTAAGCCTATTTTCTACCAACTTTTCTACTATAGGTGCTACCCCCACTCTCTCGAATGGTGTCATTCCTAATCCTATCTTGTCTAGTCTTACCACTCATCCAACGCAACATCCTCATCTCCGCTACACTTACTTTACTCTCGTGTTGGCTCTTAACCGCCCAACACTCCGTATCATACAACATTGCCGGTCATACTACATGGAAAATATATAGTTCAGAAAAAAAATTAGTTAGGAGTACAAAGTTCAGAGATTTTGGAATACTATTATAAAGGAGGTGGGGGATTACCGACTTAAAATCTGAAAGTTTTCTGCATCACGTTAAATATTGTGTTATCATATCAACATGCTTGCTAACTATAAGTATACTTCTCATGATATATATTGTTATTTTAGGGTGAAATAAAATGCTTGCTAACTATATGCTCTTTAAAGTTTCTTATGTAAGTGATAAATGTTGGCGCAGGTCTATTGGTGGCATGACAAATACAGGCCCAGGAAACCAAAGTATTTCAACCGTGTTCATACTGGATATGAGTGGAACAAATATAATCAGACTCACTATGATCATGACAATCCACCTCCAAAGGTTGTACAAGGGTATAAATTTAACATATTCTACCCAGACCTTGTAGACAAGACACAAGCTCCAACTTACACTATTGAGAAGGATGGCAGCAATGGCGAGACTTGCATCATAAGATTCCATGCAGGGCCACCATACGAAGACATTGTAAGTCTATTGTTCATGATGGTTTTAAGTCTCTTTCTTTTCAACCAAATTACTTATTTCATGTATTTGACAGGCTTTCCGCATTGTAAACAAAGAATGGGAATATTCTCACAAGAAAGGTTTTAAGTGCACATTTGAACGTGGAATTCTACATGTATACTTCAATTTCAAACGCCACCGCTACCGCAGATAA

Protein sequence

>MS.gene034966.t1

MGRKERRRRKSDDSASESTSSQSDDSDRIRRSGHHSDRRSQRRRSRHESDSDNSTSDDSSSDRDGRKRKSSRKITEEEIAQYLAKKAQRKALKVAKKLKAHTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVVQGVPIDEFSVKAEKKRQRERMAEIEKVKKRREERALEKARHEEEMALLARERARAEFQDWEKREVEFHFDQSKFRSEIRLREGRAKPIDILTKHLDGSDDLDIEINEPYMVFKGLTVNEMEELRDDIKMHLDFDRATPTHVEYWEALLLVSDWELAEARKKDAIDRARVRGEEPPAEVLAEQRGLHNSVEPDVKKLLQGKTHAELEALQAHIESEMRTGAAKLVEYWETVLKYLRIYKAKACLKEIHAKMLRKHLLRLKKPSEGEDKLEDAHVMKSEEDIEDYVKFQYAKRSLSPEPIKAEGQEGEEVEDEAGSFSPELFHGDENEEAIDPEEDRALLEQKRLSVKEEQQRRIQEAMASKPAPSEDNFEMKAMKVMGAIEEGDVIFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKVVQGYKFNIFYPDLVDKTQAPTYTIEKDGSNGETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRHRYRR