Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75072.t1 | XP_004495196.1 | 85.1 | 699 | 100 | 3 | 1 | 698 | 1 | 696 | 1.10E-227 | 799.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75072.t1 | Q5K654 | 55.2 | 676 | 291 | 5 | 28 | 698 | 7 | 675 | 2.7e-113 | 411.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75072.t1 | A0A1S2XVN9 | 85.1 | 699 | 100 | 3 | 1 | 698 | 1 | 696 | 8.0e-228 | 799.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene75072 | 0.810435 | 1.15E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene75072 | 0.81879 | 1.63E-52 | -1.69E-46 |
| MS.gene050084 | MS.gene75072 | 0.803061 | 4.17E-49 | -1.69E-46 |
| MS.gene050085 | MS.gene75072 | 0.830939 | 2.21E-55 | -1.69E-46 |
| MS.gene050359 | MS.gene75072 | 0.819105 | 1.38E-52 | -1.69E-46 |
| MS.gene050361 | MS.gene75072 | 0.808459 | 3.06E-50 | -1.69E-46 |
| MS.gene050384 | MS.gene75072 | 0.830412 | 2.98E-55 | -1.69E-46 |
| MS.gene050386 | MS.gene75072 | 0.84256 | 2.40E-58 | -1.69E-46 |
| MS.gene050414 | MS.gene75072 | 0.813262 | 2.80E-51 | -1.69E-46 |
| MS.gene050646 | MS.gene75072 | 0.832307 | 1.02E-55 | -1.69E-46 |
| MS.gene050654 | MS.gene75072 | 0.846515 | 2.07E-59 | -1.69E-46 |
| MS.gene050689 | MS.gene75072 | 0.826776 | 2.25E-54 | -1.69E-46 |
| MS.gene050752 | MS.gene75072 | 0.824143 | 9.47E-54 | -1.69E-46 |
| MS.gene050838 | MS.gene75072 | 0.812167 | 4.86E-51 | -1.69E-46 |
| MS.gene050945 | MS.gene75072 | 0.80475 | 1.86E-49 | -1.69E-46 |
| MS.gene050955 | MS.gene75072 | 0.802445 | 5.59E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene75072 | 0.842958 | 1.88E-58 | -1.69E-46 |
| MS.gene051233 | MS.gene75072 | 0.810985 | 8.78E-51 | -1.69E-46 |
| MS.gene051234 | MS.gene75072 | 0.825691 | 4.08E-54 | -1.69E-46 |
| MS.gene051243 | MS.gene75072 | 0.8079 | 4.03E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene75072 | 0.83455 | 2.81E-56 | -1.69E-46 |
| MS.gene051381 | MS.gene75072 | 0.803333 | 3.67E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene75072 | 0.830512 | 2.82E-55 | -1.69E-46 |
| MS.gene051902 | MS.gene75072 | 0.805574 | 1.25E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene75072 | 0.811225 | 7.79E-51 | -1.69E-46 |
| MS.gene052242 | MS.gene75072 | -0.825172 | 5.42E-54 | -1.69E-46 |
| MS.gene052335 | MS.gene75072 | 0.823177 | 1.59E-53 | -1.69E-46 |
| MS.gene052342 | MS.gene75072 | 0.83759 | 4.75E-57 | -1.69E-46 |
| MS.gene053058 | MS.gene75072 | 0.867077 | 1.79E-65 | -1.69E-46 |
| MS.gene053564 | MS.gene75072 | 0.822998 | 1.75E-53 | -1.69E-46 |
| MS.gene053931 | MS.gene75072 | 0.808216 | 3.45E-50 | -1.69E-46 |
| MS.gene054004 | MS.gene75072 | 0.810995 | 8.74E-51 | -1.69E-46 |
| MS.gene054403 | MS.gene75072 | 0.823542 | 1.31E-53 | -1.69E-46 |
| MS.gene05517 | MS.gene75072 | 0.807009 | 6.23E-50 | -1.69E-46 |
| MS.gene055841 | MS.gene75072 | 0.801612 | 8.29E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene75072 | 0.809371 | 1.96E-50 | -1.69E-46 |
| MS.gene056097 | MS.gene75072 | 0.816393 | 5.66E-52 | -1.69E-46 |
| MS.gene056181 | MS.gene75072 | 0.828289 | 9.77E-55 | -1.69E-46 |
| MS.gene056787 | MS.gene75072 | 0.811473 | 6.88E-51 | -1.69E-46 |
| MS.gene056849 | MS.gene75072 | 0.802917 | 4.47E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene75072 | 0.806714 | 7.19E-50 | -1.69E-46 |
| MS.gene057371 | MS.gene75072 | 0.801955 | 7.05E-49 | -1.69E-46 |
| MS.gene057392 | MS.gene75072 | 0.822009 | 2.98E-53 | -1.69E-46 |
| MS.gene057694 | MS.gene75072 | 0.808568 | 2.91E-50 | -1.69E-46 |
| MS.gene057705 | MS.gene75072 | 0.804844 | 1.78E-49 | -1.69E-46 |
| MS.gene05781 | MS.gene75072 | 0.821894 | 3.17E-53 | -1.69E-46 |
| MS.gene057999 | MS.gene75072 | 0.806783 | 6.96E-50 | -1.69E-46 |
| MS.gene058054 | MS.gene75072 | 0.823544 | 1.31E-53 | -1.69E-46 |
| MS.gene058055 | MS.gene75072 | 0.806781 | 6.96E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene75072 | 0.826343 | 2.86E-54 | -1.69E-46 |
| MS.gene058261 | MS.gene75072 | 0.815479 | 9.05E-52 | -1.69E-46 |
| MS.gene059007 | MS.gene75072 | 0.814883 | 1.23E-51 | -1.69E-46 |
| MS.gene059146 | MS.gene75072 | 0.837958 | 3.82E-57 | -1.69E-46 |
| MS.gene060244 | MS.gene75072 | 0.801861 | 7.37E-49 | -1.69E-46 |
| MS.gene060259 | MS.gene75072 | 0.80631 | 8.75E-50 | -1.69E-46 |
| MS.gene061100 | MS.gene75072 | 0.811645 | 6.31E-51 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75072.t1 | MTR_5g009520 | 96.259 | 695 | 23 | 2 | 1 | 695 | 1 | 692 | 0.0 | 1359 |
| MS.gene75072.t1 | MTR_6g090890 | 93.562 | 699 | 40 | 4 | 1 | 698 | 1 | 695 | 0.0 | 1314 |
| MS.gene75072.t1 | MTR_4g119010 | 64.946 | 368 | 110 | 6 | 331 | 696 | 71 | 421 | 2.43e-154 | 454 |
| MS.gene75072.t1 | MTR_4g119010 | 31.193 | 327 | 195 | 12 | 12 | 320 | 5 | 319 | 3.60e-27 | 115 |
| MS.gene75072.t1 | MTR_4g118885 | 67.139 | 353 | 108 | 5 | 331 | 680 | 82 | 429 | 2.25e-150 | 444 |
| MS.gene75072.t1 | MTR_4g118885 | 31.065 | 338 | 195 | 12 | 12 | 320 | 5 | 333 | 6.37e-28 | 117 |
| MS.gene75072.t1 | MTR_4g011050 | 64.336 | 143 | 26 | 2 | 270 | 412 | 13 | 130 | 1.02e-51 | 177 |
| MS.gene75072.t1 | MTR_2g012310 | 26.462 | 325 | 193 | 12 | 94 | 383 | 436 | 749 | 1.01e-16 | 85.1 |
| MS.gene75072.t1 | MTR_1g011710 | 23.694 | 536 | 321 | 21 | 65 | 551 | 225 | 721 | 7.10e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75072.t1 | AT5G41770 | 79.119 | 704 | 138 | 2 | 3 | 698 | 2 | 704 | 0.0 | 1131 |
| MS.gene75072.t1 | AT5G45990 | 75.291 | 688 | 159 | 3 | 6 | 692 | 1 | 678 | 0.0 | 1047 |
| MS.gene75072.t1 | AT5G45990 | 75.959 | 678 | 152 | 3 | 16 | 692 | 1 | 668 | 0.0 | 1041 |
| MS.gene75072.t1 | AT3G13210 | 66.952 | 702 | 180 | 6 | 1 | 697 | 1 | 655 | 0.0 | 911 |
| MS.gene75072.t1 | AT3G51110 | 73.134 | 402 | 104 | 4 | 28 | 426 | 5 | 405 | 0.0 | 610 |
| MS.gene75072.t1 | AT3G51110 | 26.546 | 388 | 210 | 12 | 193 | 562 | 70 | 400 | 2.30e-18 | 88.6 |
| MS.gene75072.t1 | AT3G51110 | 29.787 | 235 | 130 | 10 | 388 | 612 | 73 | 282 | 3.42e-18 | 88.2 |
| MS.gene75072.t1 | AT5G28740 | 24.540 | 326 | 202 | 12 | 94 | 385 | 424 | 739 | 4.42e-16 | 83.2 |
| MS.gene75072.t1 | AT4G03430 | 24.427 | 524 | 306 | 18 | 75 | 550 | 369 | 850 | 6.29e-15 | 79.3 |
| MS.gene75072.t1 | AT4G03430 | 24.427 | 524 | 306 | 18 | 75 | 550 | 369 | 850 | 6.29e-15 | 79.3 |
| MS.gene75072.t1 | AT4G03430 | 24.427 | 524 | 306 | 18 | 75 | 550 | 369 | 850 | 6.29e-15 | 79.3 |
| MS.gene75072.t1 | AT1G17760 | 23.923 | 209 | 150 | 4 | 115 | 319 | 254 | 457 | 1.36e-12 | 71.6 |
Find 155 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTCTTCTTGAGCTTCT+TGG | 0.162393 | 6.3:-83874473 | None:intergenic |
| AGACAAGTTTCTACTGAAAA+TGG | 0.236242 | 6.3:+83874493 | MS.gene75072:CDS |
| CTACTGAAAATGGTTCTTCT+AGG | 0.278537 | 6.3:+83874503 | MS.gene75072:CDS |
| TACACGTGCACGTTCGGTTT+GGG | 0.286048 | 6.3:+83871905 | MS.gene75072:CDS |
| CTCAACTTGGAGGCTTCATC+TGG | 0.300668 | 6.3:+83874412 | MS.gene75072:CDS |
| ACATACTTCTCGCACGAATA+AGG | 0.305041 | 6.3:-83874198 | None:intergenic |
| CTTCTCTTCTTGAGCTTCTT+GGG | 0.305265 | 6.3:-83874472 | None:intergenic |
| ACCGGTGCTCGTCAAATATT+AGG | 0.314781 | 6.3:+83873522 | MS.gene75072:CDS |
| TTGAGAAACATTATGGTGAT+AGG | 0.321479 | 6.3:+83872504 | MS.gene75072:CDS |
| TAGGGTTGGGTCTGCAACTT+TGG | 0.323484 | 6.3:-83871589 | None:intergenic |
| GTGGCATTTGAGAAACATTA+TGG | 0.325973 | 6.3:+83872497 | MS.gene75072:CDS |
| AGAGAGTACTGTCGGGAATA+AGG | 0.336461 | 6.3:+83872634 | MS.gene75072:CDS |
| TTAATCATGCGCGGAATGTT+TGG | 0.339042 | 6.3:+83872006 | MS.gene75072:CDS |
| TATGTTATAACCTTATCTTT+TGG | 0.339676 | 6.3:-83873564 | None:intergenic |
| AGTTCTCATTTGCAAAGATA+TGG | 0.344500 | 6.3:+83873460 | MS.gene75072:CDS |
| AGATGAGAGTTTAGACTTAT+CGG | 0.353142 | 6.3:+83874153 | MS.gene75072:CDS |
| GAGTGAGGTAACCTAGGGTT+AGG | 0.356186 | 6.3:-83871608 | None:intergenic |
| TCTTTGCAAATGAGAACTTC+TGG | 0.364205 | 6.3:-83873455 | None:intergenic |
| TCAGCTGACGTATTTCAAAC+TGG | 0.364851 | 6.3:-83873494 | None:intergenic |
| TAATCATGCGCGGAATGTTT+GGG | 0.376804 | 6.3:+83872007 | MS.gene75072:CDS |
| GCTTCTTGGGCAGCTTAGAC+TGG | 0.380324 | 6.3:-83874459 | None:intergenic |
| TTGGTTGTCTGTGTTTCCTC+AGG | 0.381322 | 6.3:-83874757 | None:intergenic |
| ATCCATTGAATTATGATTCG+TGG | 0.383275 | 6.3:+83872591 | MS.gene75072:CDS |
| AGAACTTCTGGTGAGGTATC+TGG | 0.391393 | 6.3:-83873443 | None:intergenic |
| AGGCATGTCCAGTGCTGGTT+GGG | 0.392282 | 6.3:-83873855 | None:intergenic |
| AGAAGAAAGGGCAATGCTAT+TGG | 0.393484 | 6.3:+83874381 | MS.gene75072:CDS |
| TTACACGTGCACGTTCGGTT+TGG | 0.393623 | 6.3:+83871904 | MS.gene75072:CDS |
| CAAATATTAGGAAATGCTAT+TGG | 0.393807 | 6.3:+83873534 | MS.gene75072:CDS |
| GTGGTTTGATTATATAAGAT+TGG | 0.396082 | 6.3:+83872610 | MS.gene75072:CDS |
| CAGCTGAGGAGAAGCGATAC+TGG | 0.397271 | 6.3:+83872702 | MS.gene75072:CDS |
| TTCAGTATGAAGATGAAGTT+AGG | 0.412813 | 6.3:+83872564 | MS.gene75072:CDS |
| GGGCAATGCTATTGGAGAAA+TGG | 0.422085 | 6.3:+83874389 | MS.gene75072:CDS |
| GAGTTTAGACTTATCGGAAC+AGG | 0.424789 | 6.3:+83874159 | MS.gene75072:CDS |
| ATTATAAGAATCATACTTTG+TGG | 0.425715 | 6.3:+83871946 | MS.gene75072:CDS |
| GAGATGCTTGGCAATGTTGC+GGG | 0.427673 | 6.3:+83872092 | MS.gene75072:CDS |
| TGCTCTGCAGTGATTTGAAT+CGG | 0.427872 | 6.3:-83871690 | None:intergenic |
| TCTTCGAAGCTGCTTACAAA+TGG | 0.431091 | 6.3:+83874788 | MS.gene75072:CDS |
| GGGATTGAGGATGCTATTGT+TGG | 0.433244 | 6.3:+83872530 | MS.gene75072:CDS |
| TGATCGAACAAAGCACTTGA+AGG | 0.433944 | 6.3:+83874093 | MS.gene75072:CDS |
| AGGAATTCGAGGATTTAATT+CGG | 0.438436 | 6.3:+83871817 | MS.gene75072:CDS |
| CAATGTTGCGGGAACGAGGC+AGG | 0.440319 | 6.3:+83872103 | MS.gene75072:CDS |
| TCATAAACATTCCTCGCCTT+AGG | 0.442041 | 6.3:-83872308 | None:intergenic |
| TGGTGATAGGGAAGGGATTG+AGG | 0.445484 | 6.3:+83872517 | MS.gene75072:CDS |
| AGCTTCGAAGAACTTGAGAT+TGG | 0.446952 | 6.3:-83874776 | None:intergenic |
| TGAGGTGGAATGTTAGTGTT+TGG | 0.447884 | 6.3:+83871844 | MS.gene75072:CDS |
| GGAGTTTGAGGAAAGGTGTA+AGG | 0.453060 | 6.3:+83872391 | MS.gene75072:CDS |
| AGAACTTGATGCTGGAGATA+TGG | 0.454445 | 6.3:+83872872 | MS.gene75072:CDS |
| GTCATCCTAGGGTTGGTGCT+TGG | 0.457607 | 6.3:+83872246 | MS.gene75072:CDS |
| TCAACTTGGAGGCTTCATCT+GGG | 0.458678 | 6.3:+83874413 | MS.gene75072:CDS |
| GAGGCTTCATCTGGGGAGCT+AGG | 0.458747 | 6.3:+83874421 | MS.gene75072:CDS |
| AAATATTGATCTAGCTCGTT+CGG | 0.459057 | 6.3:-83873819 | None:intergenic |
| GATAACCATCCTTGCTGATC+CGG | 0.459943 | 6.3:-83872152 | None:intergenic |
| TGTGGCGTTTGCGGAGTTTG+AGG | 0.461569 | 6.3:+83872379 | MS.gene75072:CDS |
| CTCGCCGAGTTCGGTTGAAT+CGG | 0.463406 | 6.3:-83871775 | None:intergenic |
| TGCAATTGCCCAACCAGCAC+TGG | 0.464130 | 6.3:+83873847 | MS.gene75072:CDS |
| AGAATCATACTTTGTGGTTG+AGG | 0.464603 | 6.3:+83871952 | MS.gene75072:CDS |
| ACCATTCTTCATCTCAAACT+TGG | 0.465861 | 6.3:-83872279 | None:intergenic |
| TCCAGATTTAAAAGAAGAAA+GGG | 0.469041 | 6.3:+83874369 | MS.gene75072:CDS |
| CTCCAGATTTAAAAGAAGAA+AGG | 0.471933 | 6.3:+83874368 | MS.gene75072:CDS |
| GGCAGCGCTATATTTATTTG+TGG | 0.475837 | 6.3:+83872723 | MS.gene75072:CDS |
| GGAGAAATGGCTCAACTTGG+AGG | 0.477039 | 6.3:+83874402 | MS.gene75072:CDS |
| GAGACGATACTCGCCGAGTT+CGG | 0.482763 | 6.3:-83871784 | None:intergenic |
| CTTATCGGAACAGGAACAAA+AGG | 0.485996 | 6.3:+83874168 | MS.gene75072:CDS |
| GGTAACCTAGGGTTAGGGTT+GGG | 0.487422 | 6.3:-83871602 | None:intergenic |
| TCCTAATATTTGACGAGCAC+CGG | 0.488007 | 6.3:-83873523 | None:intergenic |
| CAGTATCGCTTCTCCTCAGC+TGG | 0.490512 | 6.3:-83872701 | None:intergenic |
| AAATCCTCAGCCCTCCCCTT+CGG | 0.491580 | 6.3:-83872461 | None:intergenic |
| AGCAAATTCTTCGTGAAGCT+AGG | 0.502033 | 6.3:+83871709 | MS.gene75072:CDS |
| GCAGTGATTTGAATCGGAGC+GGG | 0.502777 | 6.3:-83871684 | None:intergenic |
| TAAAACTTCCACGTCCAACT+AGG | 0.506995 | 6.3:+83871646 | MS.gene75072:CDS |
| TGAGAAACATTATGGTGATA+GGG | 0.508280 | 6.3:+83872505 | MS.gene75072:CDS |
| AACTCAGGCATGTCCAGTGC+TGG | 0.509093 | 6.3:-83873860 | None:intergenic |
| CAGCTGACGTATTTCAAACT+GGG | 0.517928 | 6.3:-83873493 | None:intergenic |
| ATGCTATTGTTGGGAAGAGA+AGG | 0.518921 | 6.3:+83872540 | MS.gene75072:CDS |
| GTATCGTCTCCGGAAAAGAA+AGG | 0.519406 | 6.3:+83871797 | MS.gene75072:CDS |
| GTGGTATAAGTATATTCATA+TGG | 0.521111 | 6.3:+83872067 | MS.gene75072:CDS |
| CTTTATGAAGAACTTGATGC+TGG | 0.522003 | 6.3:+83872864 | MS.gene75072:CDS |
| ATCACCGATTCAACCGAACT+CGG | 0.523459 | 6.3:+83871771 | MS.gene75072:CDS |
| ATTGGAGAAATGGCTCAACT+TGG | 0.524469 | 6.3:+83874399 | MS.gene75072:CDS |
| GGATTTGTATCGGAAGTTTG+TGG | 0.524885 | 6.3:+83872478 | MS.gene75072:CDS |
| TGGTTGTCTGTGTTTCCTCA+GGG | 0.529608 | 6.3:-83874756 | None:intergenic |
| GAAGAATGGTGAGGTTCCTA+AGG | 0.530012 | 6.3:+83872292 | MS.gene75072:CDS |
| TGGAAAGGCTCCAAAAGATA+AGG | 0.531916 | 6.3:+83873554 | MS.gene75072:CDS |
| AACCACGAATCATAATTCAA+TGG | 0.532237 | 6.3:-83872593 | None:intergenic |
| CCGGAAAAGAAAGGAATTCG+AGG | 0.534313 | 6.3:+83871806 | MS.gene75072:CDS |
| CAGGCATGTCCAGTGCTGGT+TGG | 0.537115 | 6.3:-83873856 | None:intergenic |
| GGATTGAGGATGCTATTGTT+GGG | 0.544390 | 6.3:+83872531 | MS.gene75072:CDS |
| AGGATTTAATTCGGCTAGTG+AGG | 0.544638 | 6.3:+83871826 | MS.gene75072:CDS |
| ATTCATATGGAGGAGATGCT+TGG | 0.545848 | 6.3:+83872080 | MS.gene75072:CDS |
| AAAACTTCCACGTCCAACTA+GGG | 0.545882 | 6.3:+83871647 | MS.gene75072:CDS |
| TCGGGAATAAGGAAAGAACT+AGG | 0.548440 | 6.3:+83872645 | MS.gene75072:CDS |
| GAGCAAGAGTGCTTTATGAA+AGG | 0.548620 | 6.3:+83874065 | MS.gene75072:CDS |
| TGCCGCGGGTTGATCAGTTG+TGG | 0.550142 | 6.3:+83872048 | MS.gene75072:CDS |
| TGCACTTGATCATATTCCGA+AGG | 0.550436 | 6.3:+83872445 | MS.gene75072:CDS |
| GAGATGGATGAAGTGGATGC+CGG | 0.550673 | 6.3:+83872133 | MS.gene75072:CDS |
| GCCAAGTTTGAGATGAAGAA+TGG | 0.552057 | 6.3:+83872278 | MS.gene75072:CDS |
| AGTGAGGTAACCTAGGGTTA+GGG | 0.554185 | 6.3:-83871607 | None:intergenic |
| CAGTGATTTGAATCGGAGCG+GGG | 0.555547 | 6.3:-83871683 | None:intergenic |
| AACATTATGGTGATAGGGAA+GGG | 0.557902 | 6.3:+83872510 | MS.gene75072:CDS |
| TTGGATTAAGTATGCACAGT+GGG | 0.558600 | 6.3:+83871863 | MS.gene75072:CDS |
| CACCTGAAAATTGCTATGCA+TGG | 0.558764 | 6.3:+83873759 | MS.gene75072:CDS |
| GTAAGGAGGCAGAGCGTGCG+AGG | 0.562135 | 6.3:+83872408 | MS.gene75072:CDS |
| GCAAATTCTTCGTGAAGCTA+GGG | 0.562667 | 6.3:+83871710 | MS.gene75072:CDS |
| CAACTTGGAGGCTTCATCTG+GGG | 0.564192 | 6.3:+83874414 | MS.gene75072:CDS |
| TTCTTAACCCTAGTTGGACG+TGG | 0.565614 | 6.3:-83871654 | None:intergenic |
| CGTTTGCGGAGTTTGAGGAA+AGG | 0.569334 | 6.3:+83872384 | MS.gene75072:CDS |
| ATTTAATTCGGCTAGTGAGG+TGG | 0.569489 | 6.3:+83871829 | MS.gene75072:CDS |
| TATTCCGAAGGGGAGGGCTG+AGG | 0.571654 | 6.3:+83872457 | MS.gene75072:CDS |
| TGGACATGCCTGAGTTGTTG+TGG | 0.572652 | 6.3:+83873867 | MS.gene75072:CDS |
| ATTAGGAAATGCTATTGGAA+AGG | 0.577164 | 6.3:+83873539 | MS.gene75072:CDS |
| GAACAAAGCACTTGAAGGCA+TGG | 0.580016 | 6.3:+83874098 | MS.gene75072:CDS |
| GCACTTGATCATATTCCGAA+GGG | 0.581118 | 6.3:+83872446 | MS.gene75072:CDS |
| AAACATTATGGTGATAGGGA+AGG | 0.581121 | 6.3:+83872509 | MS.gene75072:CDS |
| AACTCGGCGAGTATCGTCTC+CGG | 0.581315 | 6.3:+83871787 | MS.gene75072:CDS |
| AGATTGGAAGAGAGTACTGT+CGG | 0.582737 | 6.3:+83872626 | MS.gene75072:CDS |
| ATACGTCAGCTGAATCTCAC+CGG | 0.583689 | 6.3:+83873504 | MS.gene75072:CDS |
| CGAATCCAAGCACCAACCCT+AGG | 0.585477 | 6.3:-83872251 | None:intergenic |
| GGATGCCGGATCAGCAAGGA+TGG | 0.587348 | 6.3:+83872147 | MS.gene75072:CDS |
| TGCAACTTTGGAAGAAGACA+TGG | 0.591712 | 6.3:-83871577 | None:intergenic |
| TGCAGTGATTTGAATCGGAG+CGG | 0.599357 | 6.3:-83871685 | None:intergenic |
| TGATCATATTCCGAAGGGGA+GGG | 0.601416 | 6.3:+83872451 | MS.gene75072:CDS |
| TGTACCTTCCACAACAACTC+AGG | 0.605321 | 6.3:-83873875 | None:intergenic |
| GCAGACCCAACCCTAACCCT+AGG | 0.607176 | 6.3:+83871597 | MS.gene75072:CDS |
| ATGAGATTGAACGAGCGAGA+GGG | 0.614944 | 6.3:+83872201 | MS.gene75072:CDS |
| TTGGCAATGTTGCGGGAACG+AGG | 0.615306 | 6.3:+83872099 | MS.gene75072:CDS |
| CGGGAATAAGGAAAGAACTA+GGG | 0.615471 | 6.3:+83872646 | MS.gene75072:CDS |
| GGAGATGCTTGGCAATGTTG+CGG | 0.618196 | 6.3:+83872091 | MS.gene75072:CDS |
| GATTGGAAGAGAGTACTGTC+GGG | 0.620120 | 6.3:+83872627 | MS.gene75072:CDS |
| AGCTAATGTTCCTCCAGCTG+AGG | 0.621589 | 6.3:+83872688 | MS.gene75072:CDS |
| GTATAAGTATATTCATATGG+AGG | 0.621913 | 6.3:+83872070 | MS.gene75072:CDS |
| CACTTGATCATATTCCGAAG+GGG | 0.622291 | 6.3:+83872447 | MS.gene75072:CDS |
| CTGGAGCTGATGATCTGAAG+TGG | 0.624411 | 6.3:-83874351 | None:intergenic |
| AGTGATTTGAATCGGAGCGG+GGG | 0.626461 | 6.3:-83871682 | None:intergenic |
| ATAGAGATAGAACTGCAGCT+TGG | 0.631167 | 6.3:+83873689 | MS.gene75072:CDS |
| AGGTAACCTAGGGTTAGGGT+TGG | 0.631199 | 6.3:-83871603 | None:intergenic |
| TATCGCTTCTCCTCAGCTGG+AGG | 0.632169 | 6.3:-83872698 | None:intergenic |
| ATAAGTTTATTAATCATGCG+CGG | 0.634090 | 6.3:+83871997 | MS.gene75072:CDS |
| TTGATCATATTCCGAAGGGG+AGG | 0.638933 | 6.3:+83872450 | MS.gene75072:CDS |
| GCAAATGAGAACTTCTGGTG+AGG | 0.644406 | 6.3:-83873450 | None:intergenic |
| GTTTGAGGAAAGGTGTAAGG+AGG | 0.647717 | 6.3:+83872394 | MS.gene75072:CDS |
| GTTTGAGATGAAGAATGGTG+AGG | 0.653759 | 6.3:+83872283 | MS.gene75072:CDS |
| AATGAGATTGAACGAGCGAG+AGG | 0.656303 | 6.3:+83872200 | MS.gene75072:CDS |
| GAATGTTTATGAAAGAGCGG+TGG | 0.662932 | 6.3:+83872319 | MS.gene75072:CDS |
| GCGGAATGTTTGGGATCGCG+CGG | 0.662961 | 6.3:+83872016 | MS.gene75072:CDS |
| AAGTGGATGCCGGATCAGCA+AGG | 0.664294 | 6.3:+83872143 | MS.gene75072:CDS |
| ACAGTGGGAAGAGTCGCAGA+AGG | 0.666855 | 6.3:+83871878 | MS.gene75072:CDS |
| GGAGGGCTGAGGATTTGTAT+CGG | 0.670386 | 6.3:+83872468 | MS.gene75072:CDS |
| ATGGTGAGGTTCCTAAGGCG+AGG | 0.670552 | 6.3:+83872297 | MS.gene75072:CDS |
| CATGCCTGAGTTGTTGTGGA+AGG | 0.673647 | 6.3:+83873871 | MS.gene75072:CDS |
| TACCACAACTGATCAACCCG+CGG | 0.678557 | 6.3:-83872050 | None:intergenic |
| GAGGAATGTTTATGAAAGAG+CGG | 0.689219 | 6.3:+83872316 | MS.gene75072:CDS |
| GAATAAGGAAAGAACTAGGG+AGG | 0.691859 | 6.3:+83872649 | MS.gene75072:CDS |
| AAGAGCGGTGGAGAAGCTAG+TGG | 0.697608 | 6.3:+83872331 | MS.gene75072:CDS |
| CATCGACTATCTATTCCCTG+AGG | 0.731612 | 6.3:+83874741 | MS.gene75072:CDS |
| TTTGGATTAAGTATGCACAG+TGG | 0.776258 | 6.3:+83871862 | MS.gene75072:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTATATGAAAAATATT+TGG | + | chr6.3:83873730-83873749 | MS.gene75072:CDS | 10.0% |
| !!! | AACGATAAATTTAATAATTT+TGG | - | chr6.3:83873366-83873385 | None:intergenic | 10.0% |
| !!! | AATTTTATGCATATTTTTTA+CGG | + | chr6.3:83873005-83873024 | MS.gene75072:intron | 10.0% |
| !! | AAAAAATATGCATAAAATTC+AGG | - | chr6.3:83873004-83873023 | None:intergenic | 15.0% |
| !!! | ATTTTATGCATATTTTTTAC+GGG | + | chr6.3:83873006-83873025 | MS.gene75072:intron | 15.0% |
| !!! | TTTTTTTTTTTACCTTTTCT+GGG | + | chr6.3:83873169-83873188 | MS.gene75072:intron | 15.0% |
| !!! | TTTTTTTTTTTTACCTTTTC+TGG | + | chr6.3:83873168-83873187 | MS.gene75072:intron | 15.0% |
| !! | ATTATAAGAATCATACTTTG+TGG | + | chr6.3:83871946-83871965 | MS.gene75072:CDS | 20.0% |
| !! | TATATGAAAAATATTTGGAG+TGG | + | chr6.3:83873735-83873754 | MS.gene75072:CDS | 20.0% |
| !!! | CTTTTTATTTTACCCTTATA+TGG | + | chr6.3:83873306-83873325 | MS.gene75072:intron | 20.0% |
| !!! | TATGTTATAACCTTATCTTT+TGG | - | chr6.3:83873567-83873586 | None:intergenic | 20.0% |
| !!! | TTTGAATTCTGTTTTGTTAT+CGG | + | chr6.3:83872759-83872778 | MS.gene75072:intron | 20.0% |
| !!! | TTTTATGCATATTTTTTACG+GGG | + | chr6.3:83873007-83873026 | MS.gene75072:intron | 20.0% |
| ! | ATAAGTTTATTAATCATGCG+CGG | + | chr6.3:83871997-83872016 | MS.gene75072:CDS | 25.0% |
| ! | CAAATATTAGGAAATGCTAT+TGG | + | chr6.3:83873534-83873553 | MS.gene75072:CDS | 25.0% |
| ! | CTGTTATATATTCACAACAA+AGG | - | chr6.3:83874005-83874024 | None:intergenic | 25.0% |
| ! | GAGACTTAAAACAAAATACT+TGG | - | chr6.3:83872942-83872961 | None:intergenic | 25.0% |
| ! | GTATAAGTATATTCATATGG+AGG | + | chr6.3:83872070-83872089 | MS.gene75072:CDS | 25.0% |
| ! | GTGGTATAAGTATATTCATA+TGG | + | chr6.3:83872067-83872086 | MS.gene75072:CDS | 25.0% |
| ! | GTGGTTTGATTATATAAGAT+TGG | + | chr6.3:83872610-83872629 | MS.gene75072:CDS | 25.0% |
| ! | TATATCTTAAATACCCATGA+TGG | - | chr6.3:83873207-83873226 | None:intergenic | 25.0% |
| ! | TATCTGTTGACAAAGATAAA+AGG | - | chr6.3:83873657-83873676 | None:intergenic | 25.0% |
| ! | TCCAGATTTAAAAGAAGAAA+GGG | + | chr6.3:83874369-83874388 | MS.gene75072:CDS | 25.0% |
| !! | CTTTGTTGTGAATATATAAC+AGG | + | chr6.3:83874003-83874022 | MS.gene75072:intron | 25.0% |
| AACCACGAATCATAATTCAA+TGG | - | chr6.3:83872596-83872615 | None:intergenic | 30.0% | |
| AAGTAGTGAAAATACTCAGT+AGG | - | chr6.3:83873399-83873418 | None:intergenic | 30.0% | |
| AATACTTGGAAGTTCACAAA+AGG | - | chr6.3:83872928-83872947 | None:intergenic | 30.0% | |
| AATAGAACTGGACCATATAA+GGG | - | chr6.3:83873321-83873340 | None:intergenic | 30.0% | |
| ACTATATTAGAAGCTTCCAT+AGG | - | chr6.3:83873951-83873970 | None:intergenic | 30.0% | |
| AGACAAGTTTCTACTGAAAA+TGG | + | chr6.3:83874493-83874512 | MS.gene75072:CDS | 30.0% | |
| AGATGAGAGTTTAGACTTAT+CGG | + | chr6.3:83874153-83874172 | MS.gene75072:CDS | 30.0% | |
| AGGAATTCGAGGATTTAATT+CGG | + | chr6.3:83871817-83871836 | MS.gene75072:CDS | 30.0% | |
| AGGACATAAATGCTATGATT+TGG | - | chr6.3:83873931-83873950 | None:intergenic | 30.0% | |
| AGGGTAAAATAAAAAGCCAA+TGG | - | chr6.3:83873302-83873321 | None:intergenic | 30.0% | |
| AGTTCTCATTTGCAAAGATA+TGG | + | chr6.3:83873460-83873479 | MS.gene75072:CDS | 30.0% | |
| ATCATAGCATTTATGTCCTA+TGG | + | chr6.3:83873932-83873951 | MS.gene75072:intron | 30.0% | |
| ATCCATTGAATTATGATTCG+TGG | + | chr6.3:83872591-83872610 | MS.gene75072:CDS | 30.0% | |
| ATTAGGAAATGCTATTGGAA+AGG | + | chr6.3:83873539-83873558 | MS.gene75072:CDS | 30.0% | |
| CAAATTGAGAAGAATGAAGT+AGG | - | chr6.3:83874700-83874719 | None:intergenic | 30.0% | |
| CATAAAATTCAGGAAAAGCA+TGG | - | chr6.3:83872994-83873013 | None:intergenic | 30.0% | |
| CTCCAGATTTAAAAGAAGAA+AGG | + | chr6.3:83874368-83874387 | MS.gene75072:CDS | 30.0% | |
| GAGAAAGAGAAATCACATTA+GGG | - | chr6.3:83873983-83874002 | None:intergenic | 30.0% | |
| GGAGTTAATTTAGTAAACGA+TGG | - | chr6.3:83873345-83873364 | None:intergenic | 30.0% | |
| TCACTACTTTCATTTCCTTA+GGG | + | chr6.3:83873410-83873429 | MS.gene75072:intron | 30.0% | |
| TGAGAAACATTATGGTGATA+GGG | + | chr6.3:83872505-83872524 | MS.gene75072:CDS | 30.0% | |
| TTCACTACTTTCATTTCCTT+AGG | + | chr6.3:83873409-83873428 | MS.gene75072:intron | 30.0% | |
| TTCAGTATGAAGATGAAGTT+AGG | + | chr6.3:83872564-83872583 | MS.gene75072:CDS | 30.0% | |
| TTGAGAAACATTATGGTGAT+AGG | + | chr6.3:83872504-83872523 | MS.gene75072:CDS | 30.0% | |
| ! | AAATATTGATCTAGCTCGTT+CGG | - | chr6.3:83873822-83873841 | None:intergenic | 30.0% |
| ! | AGTGATTTTGCATTTTCTAG+TGG | + | chr6.3:83872800-83872819 | MS.gene75072:intron | 30.0% |
| !! | GTTTTAAGTCTCTGTTTTGT+TGG | + | chr6.3:83872950-83872969 | MS.gene75072:intron | 30.0% |
| !! | TTTCCAAGGGTTAGTTTATA+TGG | + | chr6.3:83874562-83874581 | MS.gene75072:intron | 30.0% |
| !!! | ATTTGTTTTGTGTCATCCTA+GGG | + | chr6.3:83872235-83872254 | MS.gene75072:CDS | 30.0% |
| !!! | TGACTCTGATTTGTCATTTT+TGG | + | chr6.3:83873276-83873295 | MS.gene75072:intron | 30.0% |
| AAACATTATGGTGATAGGGA+AGG | + | chr6.3:83872509-83872528 | MS.gene75072:CDS | 35.0% | |
| AACATTATGGTGATAGGGAA+GGG | + | chr6.3:83872510-83872529 | MS.gene75072:CDS | 35.0% | |
| ACCATTCTTCATCTCAAACT+TGG | - | chr6.3:83872282-83872301 | None:intergenic | 35.0% | |
| AGAATCATACTTTGTGGTTG+AGG | + | chr6.3:83871952-83871971 | MS.gene75072:CDS | 35.0% | |
| AGACACTAACACTACAATCA+CGG | + | chr6.3:83873252-83873271 | MS.gene75072:intron | 35.0% | |
| CAATAGAACTGGACCATATA+AGG | - | chr6.3:83873322-83873341 | None:intergenic | 35.0% | |
| CTACTGAAAATGGTTCTTCT+AGG | + | chr6.3:83874503-83874522 | MS.gene75072:CDS | 35.0% | |
| CTTTATGAAGAACTTGATGC+TGG | + | chr6.3:83872864-83872883 | MS.gene75072:CDS | 35.0% | |
| GAGGAATGTTTATGAAAGAG+CGG | + | chr6.3:83872316-83872335 | MS.gene75072:CDS | 35.0% | |
| GGAGAAAGAGAAATCACATT+AGG | - | chr6.3:83873984-83874003 | None:intergenic | 35.0% | |
| GTGGCATTTGAGAAACATTA+TGG | + | chr6.3:83872497-83872516 | MS.gene75072:CDS | 35.0% | |
| TATTAGACTAGCAGATATCC+AGG | - | chr6.3:83873040-83873059 | None:intergenic | 35.0% | |
| TCTCAAACACCTCTATAAAC+AGG | - | chr6.3:83874321-83874340 | None:intergenic | 35.0% | |
| TCTTTGCAAATGAGAACTTC+TGG | - | chr6.3:83873458-83873477 | None:intergenic | 35.0% | |
| TTGGATTAAGTATGCACAGT+GGG | + | chr6.3:83871863-83871882 | MS.gene75072:CDS | 35.0% | |
| TTTGGATTAAGTATGCACAG+TGG | + | chr6.3:83871862-83871881 | MS.gene75072:CDS | 35.0% | |
| ! | CTCATTGTTTGTCTTTTGAG+TGG | + | chr6.3:83874539-83874558 | MS.gene75072:intron | 35.0% |
| ! | GCCCTTTCTTCTTTTAAATC+TGG | - | chr6.3:83874373-83874392 | None:intergenic | 35.0% |
| ! | TGTTTTGTGCCTGTTTATAG+AGG | + | chr6.3:83874309-83874328 | MS.gene75072:intron | 35.0% |
| ! | TTATTTTCTGCGTGTATCGT+AGG | + | chr6.3:83872829-83872848 | MS.gene75072:intron | 35.0% |
| ! | TTTCTGGTATCGTTAGCATT+AGG | + | chr6.3:83874612-83874631 | MS.gene75072:intron | 35.0% |
| !! | ATATGGCCTTGTTTGCAATT+TGG | + | chr6.3:83874579-83874598 | MS.gene75072:intron | 35.0% |
| !! | GTTTTGTTCTTAACCCTAGT+TGG | - | chr6.3:83871663-83871682 | None:intergenic | 35.0% |
| !!! | ATTTGGTCACTGCTATTTTC+TGG | + | chr6.3:83874596-83874615 | MS.gene75072:intron | 35.0% |
| !!! | GATTTGTCATTTTTGGCCAT+TGG | + | chr6.3:83873283-83873302 | MS.gene75072:intron | 35.0% |
| !!! | GATTTGTTTTGTGTCATCCT+AGG | + | chr6.3:83872234-83872253 | MS.gene75072:CDS | 35.0% |
| AAAACTTCCACGTCCAACTA+GGG | + | chr6.3:83871647-83871666 | MS.gene75072:CDS | 40.0% | |
| ACATACTTCTCGCACGAATA+AGG | - | chr6.3:83874201-83874220 | None:intergenic | 40.0% | |
| AGAACTTGATGCTGGAGATA+TGG | + | chr6.3:83872872-83872891 | MS.gene75072:CDS | 40.0% | |
| AGAAGAAAGGGCAATGCTAT+TGG | + | chr6.3:83874381-83874400 | MS.gene75072:CDS | 40.0% | |
| AGAGAAATCACATTAGGGCA+CGG | - | chr6.3:83873978-83873997 | None:intergenic | 40.0% | |
| AGCAAATTCTTCGTGAAGCT+AGG | + | chr6.3:83871709-83871728 | MS.gene75072:CDS | 40.0% | |
| AGCTTCGAAGAACTTGAGAT+TGG | - | chr6.3:83874779-83874798 | None:intergenic | 40.0% | |
| AGGATTTAATTCGGCTAGTG+AGG | + | chr6.3:83871826-83871845 | MS.gene75072:CDS | 40.0% | |
| AGGCCATATAAACTAACCCT+TGG | - | chr6.3:83874568-83874587 | None:intergenic | 40.0% | |
| ATAGAGATAGAACTGCAGCT+TGG | + | chr6.3:83873689-83873708 | MS.gene75072:CDS | 40.0% | |
| ATGCTATTGTTGGGAAGAGA+AGG | + | chr6.3:83872540-83872559 | MS.gene75072:CDS | 40.0% | |
| ATTCATATGGAGGAGATGCT+TGG | + | chr6.3:83872080-83872099 | MS.gene75072:CDS | 40.0% | |
| ATTGGAGAAATGGCTCAACT+TGG | + | chr6.3:83874399-83874418 | MS.gene75072:CDS | 40.0% | |
| ATTTAATTCGGCTAGTGAGG+TGG | + | chr6.3:83871829-83871848 | MS.gene75072:CDS | 40.0% | |
| CAATAGAACTCACCCAGAAA+AGG | - | chr6.3:83873184-83873203 | None:intergenic | 40.0% | |
| CACCTGAAAATTGCTATGCA+TGG | + | chr6.3:83873759-83873778 | MS.gene75072:CDS | 40.0% | |
| CACTTGATCATATTCCGAAG+GGG | + | chr6.3:83872447-83872466 | MS.gene75072:CDS | 40.0% | |
| CAGCTGACGTATTTCAAACT+GGG | - | chr6.3:83873496-83873515 | None:intergenic | 40.0% | |
| CAGTGACCAAATTGCAAACA+AGG | - | chr6.3:83874588-83874607 | None:intergenic | 40.0% | |
| CGGGAATAAGGAAAGAACTA+GGG | + | chr6.3:83872646-83872665 | MS.gene75072:CDS | 40.0% | |
| CTTATCGGAACAGGAACAAA+AGG | + | chr6.3:83874168-83874187 | MS.gene75072:CDS | 40.0% | |
| CTTCTCTTCTTGAGCTTCTT+GGG | - | chr6.3:83874475-83874494 | None:intergenic | 40.0% | |
| GAATAAGGAAAGAACTAGGG+AGG | + | chr6.3:83872649-83872668 | MS.gene75072:CDS | 40.0% | |
| GAATGTTTATGAAAGAGCGG+TGG | + | chr6.3:83872319-83872338 | MS.gene75072:CDS | 40.0% | |
| GAGTTTAGACTTATCGGAAC+AGG | + | chr6.3:83874159-83874178 | MS.gene75072:CDS | 40.0% | |
| GCAAATTCTTCGTGAAGCTA+GGG | + | chr6.3:83871710-83871729 | MS.gene75072:CDS | 40.0% | |
| GCACTTGATCATATTCCGAA+GGG | + | chr6.3:83872446-83872465 | MS.gene75072:CDS | 40.0% | |
| GGATTGAGGATGCTATTGTT+GGG | + | chr6.3:83872531-83872550 | MS.gene75072:CDS | 40.0% | |
| GGATTTGTATCGGAAGTTTG+TGG | + | chr6.3:83872478-83872497 | MS.gene75072:CDS | 40.0% | |
| GGCAGCGCTATATTTATTTG+TGG | + | chr6.3:83872723-83872742 | MS.gene75072:CDS | 40.0% | |
| GTAAACGATGGCAATAGAAC+TGG | - | chr6.3:83873333-83873352 | None:intergenic | 40.0% | |
| GTCAACCTCTGAATCAAATG+CGG | - | chr6.3:83873137-83873156 | None:intergenic | 40.0% | |
| GTGAGTTCTATTGCCATCAT+GGG | + | chr6.3:83873191-83873210 | MS.gene75072:intron | 40.0% | |
| TAAAACTTCCACGTCCAACT+AGG | + | chr6.3:83871646-83871665 | MS.gene75072:CDS | 40.0% | |
| TAATCATGCGCGGAATGTTT+GGG | + | chr6.3:83872007-83872026 | MS.gene75072:CDS | 40.0% | |
| TCAGCTGACGTATTTCAAAC+TGG | - | chr6.3:83873497-83873516 | None:intergenic | 40.0% | |
| TCATAAACATTCCTCGCCTT+AGG | - | chr6.3:83872311-83872330 | None:intergenic | 40.0% | |
| TCCTAATATTTGACGAGCAC+CGG | - | chr6.3:83873526-83873545 | None:intergenic | 40.0% | |
| TCGGGAATAAGGAAAGAACT+AGG | + | chr6.3:83872645-83872664 | MS.gene75072:CDS | 40.0% | |
| TCTTCGAAGCTGCTTACAAA+TGG | + | chr6.3:83874788-83874807 | MS.gene75072:CDS | 40.0% | |
| TCTTCTCTTCTTGAGCTTCT+TGG | - | chr6.3:83874476-83874495 | None:intergenic | 40.0% | |
| TGAGGTGGAATGTTAGTGTT+TGG | + | chr6.3:83871844-83871863 | MS.gene75072:CDS | 40.0% | |
| TGCACTTGATCATATTCCGA+AGG | + | chr6.3:83872445-83872464 | MS.gene75072:CDS | 40.0% | |
| TGCTCTGCAGTGATTTGAAT+CGG | - | chr6.3:83871693-83871712 | None:intergenic | 40.0% | |
| TGCTTACTTTCATTGCTGCA+TGG | + | chr6.3:83873616-83873635 | MS.gene75072:intron | 40.0% | |
| TGGAAAGGCTCCAAAAGATA+AGG | + | chr6.3:83873554-83873573 | MS.gene75072:CDS | 40.0% | |
| TTAATCATGCGCGGAATGTT+TGG | + | chr6.3:83872006-83872025 | MS.gene75072:CDS | 40.0% | |
| ! | CCTCGAATTCCTTTCTTTTC+CGG | - | chr6.3:83871809-83871828 | None:intergenic | 40.0% |
| ! | CTCCATGCATAGCAATTTTC+AGG | - | chr6.3:83873764-83873783 | None:intergenic | 40.0% |
| ! | GAATCGGTGATTTTCTGCTT+TGG | - | chr6.3:83871762-83871781 | None:intergenic | 40.0% |
| ! | GCCAAGTTTGAGATGAAGAA+TGG | + | chr6.3:83872278-83872297 | MS.gene75072:CDS | 40.0% |
| ! | GTTTGAGATGAAGAATGGTG+AGG | + | chr6.3:83872283-83872302 | MS.gene75072:CDS | 40.0% |
| ! | TGATCGAACAAAGCACTTGA+AGG | + | chr6.3:83874093-83874112 | MS.gene75072:CDS | 40.0% |
| !! | AGATTGGAAGAGAGTACTGT+CGG | + | chr6.3:83872626-83872645 | MS.gene75072:CDS | 40.0% |
| !! | GAGCAAGAGTGCTTTATGAA+AGG | + | chr6.3:83874065-83874084 | MS.gene75072:CDS | 40.0% |
| !! | GTCTTTTGAGTGGTTTCCAA+GGG | + | chr6.3:83874549-83874568 | MS.gene75072:intron | 40.0% |
| !! | TGTCTTTTGAGTGGTTTCCA+AGG | + | chr6.3:83874548-83874567 | MS.gene75072:intron | 40.0% |
| !! | TTTTCGAGAGATGGATGAAG+TGG | + | chr6.3:83872126-83872145 | MS.gene75072:CDS | 40.0% |
| !!! | TGATTTTCTGCTTTGGAGGA+CGG | - | chr6.3:83871755-83871774 | None:intergenic | 40.0% |
| !!! | TTTTCGAGTGAGGTAACCTA+GGG | - | chr6.3:83871616-83871635 | None:intergenic | 40.0% |
| AATGAGATTGAACGAGCGAG+AGG | + | chr6.3:83872200-83872219 | MS.gene75072:CDS | 45.0% | |
| ACCGGTGCTCGTCAAATATT+AGG | + | chr6.3:83873522-83873541 | MS.gene75072:CDS | 45.0% | |
| AGTGAGGTAACCTAGGGTTA+GGG | - | chr6.3:83871610-83871629 | None:intergenic | 45.0% | |
| ATACGTCAGCTGAATCTCAC+CGG | + | chr6.3:83873504-83873523 | MS.gene75072:CDS | 45.0% | |
| ATGAGATTGAACGAGCGAGA+GGG | + | chr6.3:83872201-83872220 | MS.gene75072:CDS | 45.0% | |
| CCGGAAAAGAAAGGAATTCG+AGG | + | chr6.3:83871806-83871825 | MS.gene75072:CDS | 45.0% | |
| GAAGAATGGTGAGGTTCCTA+AGG | + | chr6.3:83872292-83872311 | MS.gene75072:CDS | 45.0% | |
| GATAACCATCCTTGCTGATC+CGG | - | chr6.3:83872155-83872174 | None:intergenic | 45.0% | |
| GCAAATGAGAACTTCTGGTG+AGG | - | chr6.3:83873453-83873472 | None:intergenic | 45.0% | |
| GGGATTGAGGATGCTATTGT+TGG | + | chr6.3:83872530-83872549 | MS.gene75072:CDS | 45.0% | |
| GGGCAATGCTATTGGAGAAA+TGG | + | chr6.3:83874389-83874408 | MS.gene75072:CDS | 45.0% | |
| GGTGAGTTCTATTGCCATCA+TGG | + | chr6.3:83873190-83873209 | MS.gene75072:intron | 45.0% | |
| GTATCGTCTCCGGAAAAGAA+AGG | + | chr6.3:83871797-83871816 | MS.gene75072:CDS | 45.0% | |
| TCAACTTGGAGGCTTCATCT+GGG | + | chr6.3:83874413-83874432 | MS.gene75072:CDS | 45.0% | |
| TGATCATATTCCGAAGGGGA+GGG | + | chr6.3:83872451-83872470 | MS.gene75072:CDS | 45.0% | |
| TGCAGTGATTTGAATCGGAG+CGG | - | chr6.3:83871688-83871707 | None:intergenic | 45.0% | |
| TGGTTGTCTGTGTTTCCTCA+GGG | - | chr6.3:83874759-83874778 | None:intergenic | 45.0% | |
| TGTACCTTCCACAACAACTC+AGG | - | chr6.3:83873878-83873897 | None:intergenic | 45.0% | |
| TTCAGCCGCATTTGATTCAG+AGG | + | chr6.3:83873129-83873148 | MS.gene75072:intron | 45.0% | |
| TTCTTAACCCTAGTTGGACG+TGG | - | chr6.3:83871657-83871676 | None:intergenic | 45.0% | |
| TTGATCATATTCCGAAGGGG+AGG | + | chr6.3:83872450-83872469 | MS.gene75072:CDS | 45.0% | |
| TTGGTTGTCTGTGTTTCCTC+AGG | - | chr6.3:83874760-83874779 | None:intergenic | 45.0% | |
| ! | AGAACTTCTGGTGAGGTATC+TGG | - | chr6.3:83873446-83873465 | None:intergenic | 45.0% |
| ! | CATCGACTATCTATTCCCTG+AGG | + | chr6.3:83874741-83874760 | MS.gene75072:CDS | 45.0% |
| ! | GAACAAAGCACTTGAAGGCA+TGG | + | chr6.3:83874098-83874117 | MS.gene75072:CDS | 45.0% |
| ! | GGAGTTTGAGGAAAGGTGTA+AGG | + | chr6.3:83872391-83872410 | MS.gene75072:CDS | 45.0% |
| ! | GGATTTTACACGTGCACGTT+CGG | + | chr6.3:83871899-83871918 | MS.gene75072:CDS | 45.0% |
| ! | GTTTGAGGAAAGGTGTAAGG+AGG | + | chr6.3:83872394-83872413 | MS.gene75072:CDS | 45.0% |
| ! | GTTTTGTGTCATCCTAGGGT+TGG | + | chr6.3:83872239-83872258 | MS.gene75072:CDS | 45.0% |
| ! | TCGGTGATTTTCTGCTTTGG+AGG | - | chr6.3:83871759-83871778 | None:intergenic | 45.0% |
| !! | AGAGAGTACTGTCGGGAATA+AGG | + | chr6.3:83872634-83872653 | MS.gene75072:CDS | 45.0% |
| !! | ATCACCGATTCAACCGAACT+CGG | + | chr6.3:83871771-83871790 | MS.gene75072:CDS | 45.0% |
| !! | GATTGGAAGAGAGTACTGTC+GGG | + | chr6.3:83872627-83872646 | MS.gene75072:CDS | 45.0% |
| !! | TTTTTACGGGGCATCTTTCC+TGG | + | chr6.3:83873019-83873038 | MS.gene75072:intron | 45.0% |
| !!! | CTTCAGTGTCTTTTCGAGTG+AGG | - | chr6.3:83871626-83871645 | None:intergenic | 45.0% |
| !!! | CTTTTCGAGTGAGGTAACCT+AGG | - | chr6.3:83871617-83871636 | None:intergenic | 45.0% |
| AGCTAATGTTCCTCCAGCTG+AGG | + | chr6.3:83872688-83872707 | MS.gene75072:CDS | 50.0% | |
| AGGTAACCTAGGGTTAGGGT+TGG | - | chr6.3:83871606-83871625 | None:intergenic | 50.0% | |
| AGTGATTTGAATCGGAGCGG+GGG | - | chr6.3:83871685-83871704 | None:intergenic | 50.0% | |
| CAACTTGGAGGCTTCATCTG+GGG | + | chr6.3:83874414-83874433 | MS.gene75072:CDS | 50.0% | |
| CAGTGATTTGAATCGGAGCG+GGG | - | chr6.3:83871686-83871705 | None:intergenic | 50.0% | |
| CATGCCTGAGTTGTTGTGGA+AGG | + | chr6.3:83873871-83873890 | MS.gene75072:CDS | 50.0% | |
| CGTTTGCGGAGTTTGAGGAA+AGG | + | chr6.3:83872384-83872403 | MS.gene75072:CDS | 50.0% | |
| CTCAACTTGGAGGCTTCATC+TGG | + | chr6.3:83874412-83874431 | MS.gene75072:CDS | 50.0% | |
| CTGGAGCTGATGATCTGAAG+TGG | - | chr6.3:83874354-83874373 | None:intergenic | 50.0% | |
| GAGATGCTTGGCAATGTTGC+GGG | + | chr6.3:83872092-83872111 | MS.gene75072:CDS | 50.0% | |
| GAGATGGATGAAGTGGATGC+CGG | + | chr6.3:83872133-83872152 | MS.gene75072:CDS | 50.0% | |
| GAGTGAGGTAACCTAGGGTT+AGG | - | chr6.3:83871611-83871630 | None:intergenic | 50.0% | |
| GCAGTGATTTGAATCGGAGC+GGG | - | chr6.3:83871687-83871706 | None:intergenic | 50.0% | |
| GGAGAAATGGCTCAACTTGG+AGG | + | chr6.3:83874402-83874421 | MS.gene75072:CDS | 50.0% | |
| GGAGATGCTTGGCAATGTTG+CGG | + | chr6.3:83872091-83872110 | MS.gene75072:CDS | 50.0% | |
| GGAGGGCTGAGGATTTGTAT+CGG | + | chr6.3:83872468-83872487 | MS.gene75072:CDS | 50.0% | |
| GGTAACCTAGGGTTAGGGTT+GGG | - | chr6.3:83871605-83871624 | None:intergenic | 50.0% | |
| TACACGTGCACGTTCGGTTT+GGG | + | chr6.3:83871905-83871924 | MS.gene75072:CDS | 50.0% | |
| TACCACAACTGATCAACCCG+CGG | - | chr6.3:83872053-83872072 | None:intergenic | 50.0% | |
| TAGGGTTGGGTCTGCAACTT+TGG | - | chr6.3:83871592-83871611 | None:intergenic | 50.0% | |
| TCTGGTTGAGACACTCCCTA+AGG | - | chr6.3:83873428-83873447 | None:intergenic | 50.0% | |
| TGGACATGCCTGAGTTGTTG+TGG | + | chr6.3:83873867-83873886 | MS.gene75072:CDS | 50.0% | |
| TGGTGATAGGGAAGGGATTG+AGG | + | chr6.3:83872517-83872536 | MS.gene75072:CDS | 50.0% | |
| TTACACGTGCACGTTCGGTT+TGG | + | chr6.3:83871904-83871923 | MS.gene75072:CDS | 50.0% | |
| !!! | CGAAGCAGAGCTGCTTTTTG+TGG | + | chr6.3:83872361-83872380 | MS.gene75072:CDS | 50.0% |
| !!! | GCTGCTTTTTGTGGCGTTTG+CGG | + | chr6.3:83872370-83872389 | MS.gene75072:CDS | 50.0% |
| AAATCCTCAGCCCTCCCCTT+CGG | - | chr6.3:83872464-83872483 | None:intergenic | 55.0% | |
| AACTCAGGCATGTCCAGTGC+TGG | - | chr6.3:83873863-83873882 | None:intergenic | 55.0% | |
| AAGAGCGGTGGAGAAGCTAG+TGG | + | chr6.3:83872331-83872350 | MS.gene75072:CDS | 55.0% | |
| AAGTGGATGCCGGATCAGCA+AGG | + | chr6.3:83872143-83872162 | MS.gene75072:CDS | 55.0% | |
| ACAGTGGGAAGAGTCGCAGA+AGG | + | chr6.3:83871878-83871897 | MS.gene75072:CDS | 55.0% | |
| ATGGTGAGGTTCCTAAGGCG+AGG | + | chr6.3:83872297-83872316 | MS.gene75072:CDS | 55.0% | |
| CAGCTGAGGAGAAGCGATAC+TGG | + | chr6.3:83872702-83872721 | MS.gene75072:CDS | 55.0% | |
| CAGTATCGCTTCTCCTCAGC+TGG | - | chr6.3:83872704-83872723 | None:intergenic | 55.0% | |
| CGAATCCAAGCACCAACCCT+AGG | - | chr6.3:83872254-83872273 | None:intergenic | 55.0% | |
| CTCGCCGAGTTCGGTTGAAT+CGG | - | chr6.3:83871778-83871797 | None:intergenic | 55.0% | |
| GAGACGATACTCGCCGAGTT+CGG | - | chr6.3:83871787-83871806 | None:intergenic | 55.0% | |
| GCTTCTTGGGCAGCTTAGAC+TGG | - | chr6.3:83874462-83874481 | None:intergenic | 55.0% | |
| TATCGCTTCTCCTCAGCTGG+AGG | - | chr6.3:83872701-83872720 | None:intergenic | 55.0% | |
| TGCAATTGCCCAACCAGCAC+TGG | + | chr6.3:83873847-83873866 | MS.gene75072:CDS | 55.0% | |
| TGTGGCGTTTGCGGAGTTTG+AGG | + | chr6.3:83872379-83872398 | MS.gene75072:CDS | 55.0% | |
| TTGGCAATGTTGCGGGAACG+AGG | + | chr6.3:83872099-83872118 | MS.gene75072:CDS | 55.0% | |
| ! | AACTCGGCGAGTATCGTCTC+CGG | + | chr6.3:83871787-83871806 | MS.gene75072:CDS | 55.0% |
| !! | AGGCATGTCCAGTGCTGGTT+GGG | - | chr6.3:83873858-83873877 | None:intergenic | 55.0% |
| !! | CGAGGCAGGTTTTCGAGAGA+TGG | + | chr6.3:83872117-83872136 | MS.gene75072:CDS | 55.0% |
| !! | GTCATCCTAGGGTTGGTGCT+TGG | + | chr6.3:83872246-83872265 | MS.gene75072:CDS | 55.0% |
| CAATGTTGCGGGAACGAGGC+AGG | + | chr6.3:83872103-83872122 | MS.gene75072:CDS | 60.0% | |
| GAGGCTTCATCTGGGGAGCT+AGG | + | chr6.3:83874421-83874440 | MS.gene75072:CDS | 60.0% | |
| GCAGACCCAACCCTAACCCT+AGG | + | chr6.3:83871597-83871616 | MS.gene75072:CDS | 60.0% | |
| GGATGCCGGATCAGCAAGGA+TGG | + | chr6.3:83872147-83872166 | MS.gene75072:CDS | 60.0% | |
| TATTCCGAAGGGGAGGGCTG+AGG | + | chr6.3:83872457-83872476 | MS.gene75072:CDS | 60.0% | |
| ! | CGCGGTTACTCTTTTGCCGC+GGG | + | chr6.3:83872034-83872053 | MS.gene75072:CDS | 60.0% |
| ! | GCGCGGTTACTCTTTTGCCG+CGG | + | chr6.3:83872033-83872052 | MS.gene75072:CDS | 60.0% |
| ! | GCGGAATGTTTGGGATCGCG+CGG | + | chr6.3:83872016-83872035 | MS.gene75072:CDS | 60.0% |
| !! | CAGGCATGTCCAGTGCTGGT+TGG | - | chr6.3:83873859-83873878 | None:intergenic | 60.0% |
| !! | TGCCGCGGGTTGATCAGTTG+TGG | + | chr6.3:83872048-83872067 | MS.gene75072:CDS | 60.0% |
| GTAAGGAGGCAGAGCGTGCG+AGG | + | chr6.3:83872408-83872427 | MS.gene75072:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 83871579 | 83874843 | 83871579 | ID=MS.gene75072 |
| chr6.3 | mRNA | 83871579 | 83874843 | 83871579 | ID=MS.gene75072.t1;Parent=MS.gene75072 |
| chr6.3 | exon | 83871579 | 83872744 | 83871579 | ID=MS.gene75072.t1.exon1;Parent=MS.gene75072.t1 |
| chr6.3 | CDS | 83871579 | 83872744 | 83871579 | ID=cds.MS.gene75072.t1;Parent=MS.gene75072.t1 |
| chr6.3 | exon | 83872851 | 83872916 | 83872851 | ID=MS.gene75072.t1.exon2;Parent=MS.gene75072.t1 |
| chr6.3 | CDS | 83872851 | 83872916 | 83872851 | ID=cds.MS.gene75072.t1;Parent=MS.gene75072.t1 |
| chr6.3 | exon | 83873431 | 83873575 | 83873431 | ID=MS.gene75072.t1.exon3;Parent=MS.gene75072.t1 |
| chr6.3 | CDS | 83873431 | 83873575 | 83873431 | ID=cds.MS.gene75072.t1;Parent=MS.gene75072.t1 |
| chr6.3 | exon | 83873674 | 83873892 | 83873674 | ID=MS.gene75072.t1.exon4;Parent=MS.gene75072.t1 |
| chr6.3 | CDS | 83873674 | 83873892 | 83873674 | ID=cds.MS.gene75072.t1;Parent=MS.gene75072.t1 |
| chr6.3 | exon | 83874025 | 83874214 | 83874025 | ID=MS.gene75072.t1.exon5;Parent=MS.gene75072.t1 |
| chr6.3 | CDS | 83874025 | 83874214 | 83874025 | ID=cds.MS.gene75072.t1;Parent=MS.gene75072.t1 |
| chr6.3 | exon | 83874329 | 83874524 | 83874329 | ID=MS.gene75072.t1.exon6;Parent=MS.gene75072.t1 |
| chr6.3 | CDS | 83874329 | 83874524 | 83874329 | ID=cds.MS.gene75072.t1;Parent=MS.gene75072.t1 |
| chr6.3 | exon | 83874729 | 83874843 | 83874729 | ID=MS.gene75072.t1.exon7;Parent=MS.gene75072.t1 |
| chr6.3 | CDS | 83874729 | 83874843 | 83874729 | ID=cds.MS.gene75072.t1;Parent=MS.gene75072.t1 |
| Gene Sequence |
| Protein sequence |
