Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66321.t1 | XP_017407260.1 | 85.5 | 648 | 79 | 2 | 12 | 644 | 48 | 695 | 1.60E-212 | 749.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66321.t1 | Q9BZJ0 | 52.6 | 403 | 162 | 5 | 258 | 644 | 445 | 834 | 2.8e-109 | 397.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66321.t1 | A0A0L9T997 | 85.5 | 648 | 79 | 2 | 12 | 644 | 48 | 695 | 1.1e-212 | 749.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene66321 | 0.82438 | 8.33E-54 | -1.69E-46 |
| MS.gene050689 | MS.gene66321 | 0.811812 | 5.81E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene66321 | 0.810827 | 9.50E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene66321 | 0.808587 | 2.88E-50 | -1.69E-46 |
| MS.gene05462 | MS.gene66321 | 0.802727 | 4.89E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene66321 | 0.802507 | 5.43E-49 | -1.69E-46 |
| MS.gene05978 | MS.gene66321 | 0.818619 | 1.78E-52 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66321.t1 | MTR_5g009520 | 89.740 | 692 | 21 | 2 | 1 | 642 | 1 | 692 | 0.0 | 1241 |
| MS.gene66321.t1 | MTR_6g090890 | 87.931 | 696 | 32 | 4 | 1 | 645 | 1 | 695 | 0.0 | 1204 |
| MS.gene66321.t1 | MTR_4g119010 | 61.035 | 367 | 111 | 6 | 293 | 643 | 71 | 421 | 1.19e-140 | 417 |
| MS.gene66321.t1 | MTR_4g119010 | 27.237 | 257 | 161 | 9 | 44 | 282 | 71 | 319 | 1.40e-13 | 73.6 |
| MS.gene66321.t1 | MTR_4g118885 | 62.784 | 352 | 110 | 4 | 293 | 627 | 82 | 429 | 1.44e-136 | 407 |
| MS.gene66321.t1 | MTR_4g118885 | 27.622 | 286 | 141 | 10 | 12 | 236 | 43 | 323 | 1.65e-13 | 73.6 |
| MS.gene66321.t1 | MTR_4g011050 | 67.606 | 142 | 22 | 2 | 232 | 373 | 13 | 130 | 3.86e-54 | 182 |
| MS.gene66321.t1 | MTR_2g012310 | 25.926 | 324 | 195 | 11 | 56 | 344 | 436 | 749 | 3.47e-17 | 86.3 |
| MS.gene66321.t1 | MTR_2g012310 | 25.911 | 247 | 172 | 5 | 54 | 289 | 526 | 772 | 5.18e-15 | 79.3 |
| MS.gene66321.t1 | MTR_2g012310 | 23.342 | 377 | 230 | 14 | 35 | 371 | 375 | 732 | 6.12e-11 | 66.2 |
| MS.gene66321.t1 | MTR_1g011710 | 24.303 | 502 | 298 | 18 | 58 | 512 | 255 | 721 | 4.79e-14 | 76.3 |
| MS.gene66321.t1 | MTR_1g011710 | 23.576 | 509 | 340 | 20 | 70 | 571 | 233 | 699 | 2.84e-11 | 67.4 |
| MS.gene66321.t1 | MTR_7g068630 | 24.138 | 493 | 293 | 16 | 26 | 471 | 360 | 818 | 4.31e-13 | 73.2 |
| MS.gene66321.t1 | MTR_4g122060 | 22.772 | 303 | 200 | 6 | 54 | 326 | 220 | 518 | 9.74e-12 | 68.6 |
| MS.gene66321.t1 | MTR_6g026900 | 25.604 | 207 | 143 | 5 | 77 | 277 | 254 | 455 | 5.73e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66321.t1 | AT5G41770 | 77.591 | 656 | 125 | 2 | 12 | 645 | 49 | 704 | 0.0 | 1026 |
| MS.gene66321.t1 | AT5G45990 | 74.883 | 641 | 137 | 3 | 12 | 637 | 35 | 666 | 0.0 | 957 |
| MS.gene66321.t1 | AT5G45990 | 74.883 | 641 | 137 | 3 | 12 | 637 | 45 | 676 | 0.0 | 956 |
| MS.gene66321.t1 | AT3G13210 | 65.798 | 652 | 160 | 5 | 12 | 644 | 48 | 655 | 0.0 | 820 |
| MS.gene66321.t1 | AT3G51110 | 73.351 | 379 | 98 | 3 | 12 | 387 | 27 | 405 | 0.0 | 575 |
| MS.gene66321.t1 | AT3G51110 | 25.568 | 352 | 219 | 10 | 191 | 523 | 73 | 400 | 4.49e-19 | 90.5 |
| MS.gene66321.t1 | AT3G51110 | 28.125 | 288 | 166 | 12 | 349 | 621 | 73 | 334 | 1.17e-18 | 89.4 |
| MS.gene66321.t1 | AT4G03430 | 23.892 | 519 | 314 | 16 | 37 | 511 | 369 | 850 | 3.24e-17 | 86.7 |
| MS.gene66321.t1 | AT4G03430 | 23.892 | 519 | 314 | 16 | 37 | 511 | 369 | 850 | 3.24e-17 | 86.7 |
| MS.gene66321.t1 | AT4G03430 | 23.892 | 519 | 314 | 16 | 37 | 511 | 369 | 850 | 3.24e-17 | 86.7 |
| MS.gene66321.t1 | AT5G28740 | 24.540 | 326 | 201 | 12 | 56 | 346 | 424 | 739 | 3.22e-16 | 83.2 |
| MS.gene66321.t1 | AT5G28740 | 25.101 | 247 | 174 | 5 | 54 | 289 | 514 | 760 | 6.52e-14 | 75.9 |
| MS.gene66321.t1 | AT1G17760 | 26.316 | 209 | 145 | 5 | 77 | 281 | 254 | 457 | 6.77e-13 | 72.4 |
Find 138 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTCTTCTTGAGCTTCT+TGG | 0.162393 | 6.4:-63391279 | None:intergenic |
| TATTATGTTACCTTATCTTT+TGG | 0.272441 | 6.4:-63390341 | None:intergenic |
| GGAAGAGAGTGTCGGGAATA+AGG | 0.273700 | 6.4:+63388924 | MS.gene66321:CDS |
| TACACGTGCACGTTCGGTTT+GGG | 0.286048 | 6.4:+63388198 | MS.gene66321:CDS |
| GAGATGCTTGGCAATGTTGC+GGG | 0.297907 | 6.4:+63388385 | MS.gene66321:CDS |
| ACATACTTCTCGCACGAATA+AGG | 0.305041 | 6.4:-63391004 | None:intergenic |
| CTTCTCTTCTTGAGCTTCTT+GGG | 0.305265 | 6.4:-63391278 | None:intergenic |
| CTACTGAAGATGGTTCTTCT+AGG | 0.309477 | 6.4:+63391309 | MS.gene66321:CDS |
| TTAATCATGCGCGGAAAGTT+TGG | 0.312568 | 6.4:+63388299 | MS.gene66321:CDS |
| ACCGGTGCTCGTCAAATATT+AGG | 0.314781 | 6.4:+63390299 | MS.gene66321:CDS |
| TAGGGTTGGGTCTGCAACTT+TGG | 0.329426 | 6.4:-63387887 | None:intergenic |
| AGTTCTCATTTGCAAAGATA+TGG | 0.344500 | 6.4:+63390237 | MS.gene66321:CDS |
| AGATGAGAGTTTAGACTTAT+CGG | 0.353142 | 6.4:+63390959 | MS.gene66321:CDS |
| TCTTTGCAAATGAGAACTTC+TGG | 0.364205 | 6.4:-63390232 | None:intergenic |
| TCAGCTGACGTATTTCAAAC+TGG | 0.364851 | 6.4:-63390271 | None:intergenic |
| GCTTCTTGGGCAGCTTAGAC+TGG | 0.380324 | 6.4:-63391265 | None:intergenic |
| TTGGTTGTCTGTGTTTCCTC+AGG | 0.381322 | 6.4:-63391545 | None:intergenic |
| TAATCATGCGCGGAAAGTTT+GGG | 0.381909 | 6.4:+63388300 | MS.gene66321:CDS |
| AGAACTTCTGGTGAGGTATC+TGG | 0.391393 | 6.4:-63390220 | None:intergenic |
| AGGCATGTCCAGTGCTGGTT+GGG | 0.392282 | 6.4:-63390626 | None:intergenic |
| AGAAGAAAGGGCAATGCTAT+TGG | 0.393484 | 6.4:+63391187 | MS.gene66321:CDS |
| TTACACGTGCACGTTCGGTT+TGG | 0.393623 | 6.4:+63388197 | MS.gene66321:CDS |
| CAAATATTAGGAAATGCTAT+TGG | 0.393807 | 6.4:+63390311 | MS.gene66321:CDS |
| GTGGTTTGATTATATAAGAT+TGG | 0.396082 | 6.4:+63388903 | MS.gene66321:CDS |
| CAGCTGAGGAGAAGCGATAC+TGG | 0.397271 | 6.4:+63388992 | MS.gene66321:CDS |
| TTGAGAAACAGTATGGTGAT+AGG | 0.405534 | 6.4:+63388797 | MS.gene66321:CDS |
| TTCGGTTTGGGAACGAGCAT+TGG | 0.408066 | 6.4:+63388210 | MS.gene66321:CDS |
| TTCAGTATGAAGATGAAGTT+AGG | 0.412813 | 6.4:+63388857 | MS.gene66321:CDS |
| GGGCAATGCTATTGGAGAAA+TGG | 0.422085 | 6.4:+63391195 | MS.gene66321:CDS |
| GAGTTTAGACTTATCGGAAC+AGG | 0.424789 | 6.4:+63390965 | MS.gene66321:CDS |
| ATTATAAGAATCATACTTTG+TGG | 0.425715 | 6.4:+63388239 | MS.gene66321:CDS |
| CTCGCCAAGTTCGGTTGAAT+CGG | 0.427780 | 6.4:-63388068 | None:intergenic |
| TCTTCGAAGCTGCTTACAAA+TGG | 0.431091 | 6.4:+63391576 | MS.gene66321:CDS |
| ATACATTGAATTATGATTCG+TGG | 0.432055 | 6.4:+63388884 | MS.gene66321:CDS |
| GGGATTGAGGATGCTATTGT+TGG | 0.433244 | 6.4:+63388823 | MS.gene66321:CDS |
| TGATCGAACAAAGCACTTGA+AGG | 0.433944 | 6.4:+63390899 | MS.gene66321:CDS |
| ATCACCGATTCAACCGAACT+TGG | 0.435978 | 6.4:+63388064 | MS.gene66321:CDS |
| TCATAAACATTCCTCGCCTT+AGG | 0.442041 | 6.4:-63388601 | None:intergenic |
| CGAGTTTGAGGAAAGGTGTA+AGG | 0.445203 | 6.4:+63388684 | MS.gene66321:CDS |
| AGCTTCGAAGAACTTGAGAT+TGG | 0.446952 | 6.4:-63391564 | None:intergenic |
| GCCATTCTTCATCTCAAACT+TGG | 0.450941 | 6.4:-63388572 | None:intergenic |
| AGAACTTGATGCTGGAGATA+TGG | 0.454445 | 6.4:+63389162 | MS.gene66321:CDS |
| GTCATCCTAGGGTTGGTGCT+TGG | 0.457607 | 6.4:+63388539 | MS.gene66321:CDS |
| AAATATTGATCTAGCTCGTT+CGG | 0.459057 | 6.4:-63390590 | None:intergenic |
| GAGTGAGGTAACCTAGGGTT+GGG | 0.459556 | 6.4:-63387900 | None:intergenic |
| GATAACCATCCTTGCTGATC+CGG | 0.459943 | 6.4:-63388445 | None:intergenic |
| TGTGGCGTTTGCCGAGTTTG+AGG | 0.461569 | 6.4:+63388672 | MS.gene66321:CDS |
| TGAGGTGGAATGTTAGTGTT+TGG | 0.461636 | 6.4:+63388137 | MS.gene66321:CDS |
| TGCAATTGCCCAACCAGCAC+TGG | 0.464130 | 6.4:+63390618 | MS.gene66321:CDS |
| TCCAGATTTAAAAGAAGAAA+GGG | 0.469041 | 6.4:+63391175 | MS.gene66321:CDS |
| AGGAATTCGAGGATTTAATT+CGG | 0.469159 | 6.4:+63388110 | MS.gene66321:CDS |
| CTCCAGATTTAAAAGAAGAA+AGG | 0.471933 | 6.4:+63391174 | MS.gene66321:CDS |
| CGAGTGAGGTAACCTAGGGT+TGG | 0.473132 | 6.4:-63387901 | None:intergenic |
| GTGGCATTTGAGAAACAGTA+TGG | 0.475591 | 6.4:+63388790 | MS.gene66321:CDS |
| GGCAGCGCTATATTTATTTG+TGG | 0.475837 | 6.4:+63389013 | MS.gene66321:CDS |
| TGGTGATAGGGAAGGGATTG+AGG | 0.479307 | 6.4:+63388810 | MS.gene66321:CDS |
| AGACAAGTTTCTACTGAAGA+TGG | 0.481734 | 6.4:+63391299 | MS.gene66321:CDS |
| GGAGATGCTTGGCAATGTTG+CGG | 0.481922 | 6.4:+63388384 | MS.gene66321:CDS |
| CTTATCGGAACAGGAACAAA+AGG | 0.485996 | 6.4:+63390974 | MS.gene66321:CDS |
| GAGACGATACTCGCCAAGTT+CGG | 0.486835 | 6.4:-63388077 | None:intergenic |
| TCCTAATATTTGACGAGCAC+CGG | 0.488007 | 6.4:-63390300 | None:intergenic |
| GCCAAGTTTGAGATGAAGAA+TGG | 0.489122 | 6.4:+63388571 | MS.gene66321:CDS |
| CAGTATCGCTTCTCCTCAGC+TGG | 0.490512 | 6.4:-63388991 | None:intergenic |
| AAATCCTCAGCCCTCCCCTT+CGG | 0.491580 | 6.4:-63388754 | None:intergenic |
| AACAGTATGGTGATAGGGAA+GGG | 0.497023 | 6.4:+63388803 | MS.gene66321:CDS |
| AGGATTTAATTCGGCGAGTG+AGG | 0.501540 | 6.4:+63388119 | MS.gene66321:CDS |
| GTGGTATAAGTATATTCATA+TGG | 0.508886 | 6.4:+63388360 | MS.gene66321:CDS |
| TAAGATTGGAAGAGAGTGTC+GGG | 0.508930 | 6.4:+63388917 | MS.gene66321:CDS |
| AACTCAGGCATGTCCAGTGC+TGG | 0.509093 | 6.4:-63390631 | None:intergenic |
| GAAGAATGGCGAGGTTCCTA+AGG | 0.514090 | 6.4:+63388585 | MS.gene66321:CDS |
| CAGCTGACGTATTTCAAACT+GGG | 0.517928 | 6.4:-63390270 | None:intergenic |
| ATGCTATTGTTGGGAAGAGA+AGG | 0.518921 | 6.4:+63388833 | MS.gene66321:CDS |
| GTATCGTCTCCGGAAAAGAA+AGG | 0.519406 | 6.4:+63388090 | MS.gene66321:CDS |
| CTTTATGAAGAACTTGATGC+TGG | 0.522003 | 6.4:+63389154 | MS.gene66321:CDS |
| GGATTTGTATCGGAAGTTTG+TGG | 0.524885 | 6.4:+63388771 | MS.gene66321:CDS |
| TGAGAAACAGTATGGTGATA+GGG | 0.526975 | 6.4:+63388798 | MS.gene66321:CDS |
| TGGTTGTCTGTGTTTCCTCA+GGG | 0.529608 | 6.4:-63391544 | None:intergenic |
| GTAAGGAGGCAGAGCGTGCA+AGG | 0.531706 | 6.4:+63388701 | MS.gene66321:CDS |
| TGGAAAGGCTCCAAAAGATA+AGG | 0.531916 | 6.4:+63390331 | MS.gene66321:CDS |
| CCGGAAAAGAAAGGAATTCG+AGG | 0.534313 | 6.4:+63388099 | MS.gene66321:CDS |
| CAGGCATGTCCAGTGCTGGT+TGG | 0.537115 | 6.4:-63390627 | None:intergenic |
| AGATGCTTGGCAATGTTGCG+GGG | 0.543027 | 6.4:+63388386 | MS.gene66321:CDS |
| CTTACACCTTTCCTCAAACT+CGG | 0.543266 | 6.4:-63388683 | None:intergenic |
| AAACAGTATGGTGATAGGGA+AGG | 0.543304 | 6.4:+63388802 | MS.gene66321:CDS |
| GGATTGAGGATGCTATTGTT+GGG | 0.544390 | 6.4:+63388824 | MS.gene66321:CDS |
| ATTCATATGGAGGAGATGCT+TGG | 0.545848 | 6.4:+63388373 | MS.gene66321:CDS |
| GAGCAAGAGTGCTTTATGAA+AGG | 0.548620 | 6.4:+63390871 | MS.gene66321:CDS |
| TGCACTTGATCATATTCCGA+AGG | 0.550436 | 6.4:+63388738 | MS.gene66321:CDS |
| GAGATGGATGAAGTGGATGC+CGG | 0.550673 | 6.4:+63388426 | MS.gene66321:CDS |
| TCGGGAATAAGGAAAGAACT+AGG | 0.555595 | 6.4:+63388935 | MS.gene66321:CDS |
| TTGGATTAAGTATGCACAGT+GGG | 0.558600 | 6.4:+63388156 | MS.gene66321:CDS |
| ATTTAATTCGGCGAGTGAGG+TGG | 0.562126 | 6.4:+63388122 | MS.gene66321:CDS |
| CGTTTGCCGAGTTTGAGGAA+AGG | 0.569334 | 6.4:+63388677 | MS.gene66321:CDS |
| AAAGTTGCAGACCCAACCCT+AGG | 0.571367 | 6.4:+63387889 | MS.gene66321:CDS |
| TATTCCGAAGGGGAGGGCTG+AGG | 0.571654 | 6.4:+63388750 | MS.gene66321:CDS |
| TGGACATGCCTGAGTTGTTG+TGG | 0.572652 | 6.4:+63390638 | MS.gene66321:CDS |
| ATTAGGAAATGCTATTGGAA+AGG | 0.577164 | 6.4:+63390316 | MS.gene66321:CDS |
| TGCCGCGGGTTGATCAGCTG+TGG | 0.577353 | 6.4:+63388341 | MS.gene66321:CDS |
| GAACAAAGCACTTGAAGGCA+TGG | 0.580016 | 6.4:+63390904 | MS.gene66321:CDS |
| GCACTTGATCATATTCCGAA+GGG | 0.581118 | 6.4:+63388739 | MS.gene66321:CDS |
| ATACGTCAGCTGAATCTCAC+CGG | 0.583689 | 6.4:+63390281 | MS.gene66321:CDS |
| CGAATCCAAGCACCAACCCT+AGG | 0.585477 | 6.4:-63388544 | None:intergenic |
| GGATGCCGGATCAGCAAGGA+TGG | 0.587348 | 6.4:+63388440 | MS.gene66321:CDS |
| TGCAACTTTGGAAGAAGACA+TGG | 0.591712 | 6.4:-63387875 | None:intergenic |
| GGAGAAGCTAGCGGATGATG+AGG | 0.592283 | 6.4:+63388633 | MS.gene66321:CDS |
| AACTTGGCGAGTATCGTCTC+CGG | 0.594012 | 6.4:+63388080 | MS.gene66321:CDS |
| ATAAGATTGGAAGAGAGTGT+CGG | 0.599092 | 6.4:+63388916 | MS.gene66321:CDS |
| TGATCATATTCCGAAGGGGA+GGG | 0.601416 | 6.4:+63388744 | MS.gene66321:CDS |
| TGTACCTTCCACAACAACTC+AGG | 0.605321 | 6.4:-63390646 | None:intergenic |
| ATGAGATTGAACGAGCGAGA+GGG | 0.614944 | 6.4:+63388494 | MS.gene66321:CDS |
| AGCTAATGTTCCTCCAGCTG+AGG | 0.621589 | 6.4:+63388978 | MS.gene66321:CDS |
| GTATAAGTATATTCATATGG+AGG | 0.621913 | 6.4:+63388363 | MS.gene66321:CDS |
| CACTTGATCATATTCCGAAG+GGG | 0.622291 | 6.4:+63388740 | MS.gene66321:CDS |
| CACCTGAAAATTGCTATGCA+TGG | 0.623960 | 6.4:+63390530 | MS.gene66321:CDS |
| CTGGAGCTGATGATCTGAAG+TGG | 0.624411 | 6.4:-63391157 | None:intergenic |
| CGGGAATAAGGAAAGAACTA+GGG | 0.627920 | 6.4:+63388936 | MS.gene66321:CDS |
| ATAGAGATAGAACTGCAGCT+TGG | 0.631167 | 6.4:+63390460 | MS.gene66321:CDS |
| TATCGCTTCTCCTCAGCTGG+AGG | 0.632169 | 6.4:-63388988 | None:intergenic |
| ATAAGTTTATTAATCATGCG+CGG | 0.634090 | 6.4:+63388290 | MS.gene66321:CDS |
| TTGATCATATTCCGAAGGGG+AGG | 0.638933 | 6.4:+63388743 | MS.gene66321:CDS |
| GATGCTTGGCAATGTTGCGG+GGG | 0.643207 | 6.4:+63388387 | MS.gene66321:CDS |
| GCAAATGAGAACTTCTGGTG+AGG | 0.644406 | 6.4:-63390227 | None:intergenic |
| GTTTGAGGAAAGGTGTAAGG+AGG | 0.647717 | 6.4:+63388687 | MS.gene66321:CDS |
| ATGGCGAGGTTCCTAAGGCG+AGG | 0.653917 | 6.4:+63388590 | MS.gene66321:CDS |
| AATGAGATTGAACGAGCGAG+AGG | 0.656303 | 6.4:+63388493 | MS.gene66321:CDS |
| GAATGTTTATGAAAGAGCGG+TGG | 0.662932 | 6.4:+63388612 | MS.gene66321:CDS |
| AAGTGGATGCCGGATCAGCA+AGG | 0.664294 | 6.4:+63388436 | MS.gene66321:CDS |
| ACAGTGGGAAGAGTCGCAGA+AGG | 0.666855 | 6.4:+63388171 | MS.gene66321:CDS |
| GTTTGAGATGAAGAATGGCG+AGG | 0.667240 | 6.4:+63388576 | MS.gene66321:CDS |
| GGAGGGCTGAGGATTTGTAT+CGG | 0.670386 | 6.4:+63388761 | MS.gene66321:CDS |
| CATGCCTGAGTTGTTGTGGA+AGG | 0.673647 | 6.4:+63390642 | MS.gene66321:CDS |
| GCGGAAAGTTTGGGATCGCG+CGG | 0.678522 | 6.4:+63388309 | MS.gene66321:CDS |
| GAGGAATGTTTATGAAAGAG+CGG | 0.689219 | 6.4:+63388609 | MS.gene66321:CDS |
| GAATAAGGAAAGAACTAGGG+AGG | 0.691859 | 6.4:+63388939 | MS.gene66321:CDS |
| TACCACAGCTGATCAACCCG+CGG | 0.706156 | 6.4:-63388343 | None:intergenic |
| AAGAGCGGTGGAGAAGCTAG+CGG | 0.740066 | 6.4:+63388624 | MS.gene66321:CDS |
| CATCGACTATCTATTCCCTG+AGG | 0.740670 | 6.4:+63391529 | MS.gene66321:CDS |
| TTTGGATTAAGTATGCACAG+TGG | 0.776258 | 6.4:+63388155 | MS.gene66321:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTATATGAAAAATATT+TGG | + | chr6.4:63390501-63390520 | MS.gene66321:CDS | 10.0% |
| !! | ATGTAACAAAAATTAAAAGT+AGG | - | chr6.4:63389507-63389526 | None:intergenic | 15.0% |
| !!! | AACGATAAATTTAACAATTT+TGG | - | chr6.4:63390143-63390162 | None:intergenic | 15.0% |
| !!! | ATTCTGTATAATTTTGTTTT+AGG | + | chr6.4:63389605-63389624 | MS.gene66321:intron | 15.0% |
| !!! | TTTTTTTTTTTTACCTTTTC+TGG | + | chr6.4:63389999-63390018 | MS.gene66321:intron | 15.0% |
| !! | ATTATAAGAATCATACTTTG+TGG | + | chr6.4:63388239-63388258 | MS.gene66321:CDS | 20.0% |
| !! | TATATGAAAAATATTTGGAG+TGG | + | chr6.4:63390506-63390525 | MS.gene66321:CDS | 20.0% |
| !! | TCAAATTGTGAATATATAAC+AGG | + | chr6.4:63390809-63390828 | MS.gene66321:intron | 20.0% |
| !! | TTATCTACACTATAAATTTG+CGG | - | chr6.4:63389850-63389869 | None:intergenic | 20.0% |
| !!! | CTTTTTATTTTACCCTTATA+TGG | + | chr6.4:63390083-63390102 | MS.gene66321:intron | 20.0% |
| !!! | TATTATGTTACCTTATCTTT+TGG | - | chr6.4:63390344-63390363 | None:intergenic | 20.0% |
| !!! | TGTATAATTTTGTTTTAGGT+CGG | + | chr6.4:63389609-63389628 | MS.gene66321:intron | 20.0% |
| !!! | TTTGAATTCTGTTTTGTTAT+CGG | + | chr6.4:63389049-63389068 | MS.gene66321:intron | 20.0% |
| ! | AAAAACCTTGCATAAAATTC+AGG | - | chr6.4:63389300-63389319 | None:intergenic | 25.0% |
| ! | ACTCTAAATTTATGCAGATT+TGG | - | chr6.4:63389742-63389761 | None:intergenic | 25.0% |
| ! | ATAAGTTTATTAATCATGCG+CGG | + | chr6.4:63388290-63388309 | MS.gene66321:CDS | 25.0% |
| ! | ATACATTGAATTATGATTCG+TGG | + | chr6.4:63388884-63388903 | MS.gene66321:CDS | 25.0% |
| ! | ATATTCACAATTTGACAGTT+AGG | - | chr6.4:63390804-63390823 | None:intergenic | 25.0% |
| ! | CAAATATTAGGAAATGCTAT+TGG | + | chr6.4:63390311-63390330 | MS.gene66321:CDS | 25.0% |
| ! | GTATAAGTATATTCATATGG+AGG | + | chr6.4:63388363-63388382 | MS.gene66321:CDS | 25.0% |
| ! | GTGGTATAAGTATATTCATA+TGG | + | chr6.4:63388360-63388379 | MS.gene66321:CDS | 25.0% |
| ! | GTGGTTTGATTATATAAGAT+TGG | + | chr6.4:63388903-63388922 | MS.gene66321:CDS | 25.0% |
| ! | TAATAGTTACTATAAGTACC+TGG | + | chr6.4:63389532-63389551 | MS.gene66321:intron | 25.0% |
| ! | TATATCTTAAATACCCATGA+TGG | - | chr6.4:63390038-63390057 | None:intergenic | 25.0% |
| ! | TATCTGTTGACAAAGATAAA+AGG | - | chr6.4:63390428-63390447 | None:intergenic | 25.0% |
| ! | TATTATCGGGAGAAAAAAAT+AGG | + | chr6.4:63389821-63389840 | MS.gene66321:intron | 25.0% |
| ! | TCCAGATTTAAAAGAAGAAA+GGG | + | chr6.4:63391175-63391194 | MS.gene66321:CDS | 25.0% |
| ! | TTGCAATCTATGCATATTAT+CGG | + | chr6.4:63389807-63389826 | MS.gene66321:intron | 25.0% |
| !! | ACATTAAAATAGCCTCTTTT+AGG | + | chr6.4:63389467-63389486 | MS.gene66321:intron | 25.0% |
| !!! | AAAACTTGCTAGTTAAGATT+AGG | + | chr6.4:63389868-63389887 | MS.gene66321:intron | 25.0% |
| !!! | AAGAGCTTTATGATCTTTTT+TGG | + | chr6.4:63389421-63389440 | MS.gene66321:intron | 25.0% |
| !!! | AGAGCTTTATGATCTTTTTT+GGG | + | chr6.4:63389422-63389441 | MS.gene66321:intron | 25.0% |
| !!! | CGGTTATACTTGTTTTAAAT+TGG | + | chr6.4:63389629-63389648 | MS.gene66321:intron | 25.0% |
| !!! | TTTACAAGGGTTAGTTTATA+TGG | + | chr6.4:63391365-63391384 | MS.gene66321:intron | 25.0% |
| AATAGAACTGGACCATATAA+GGG | - | chr6.4:63390098-63390117 | None:intergenic | 30.0% | |
| ACACTACTTTCATTTCCTTA+GGG | + | chr6.4:63390187-63390206 | MS.gene66321:intron | 30.0% | |
| ACTATATTAGAAGCTTCCAT+AGG | - | chr6.4:63390722-63390741 | None:intergenic | 30.0% | |
| AGATGAGAGTTTAGACTTAT+CGG | + | chr6.4:63390959-63390978 | MS.gene66321:CDS | 30.0% | |
| AGGAATTCGAGGATTTAATT+CGG | + | chr6.4:63388110-63388129 | MS.gene66321:CDS | 30.0% | |
| AGGACATAAATGCTATGATT+TGG | - | chr6.4:63390702-63390721 | None:intergenic | 30.0% | |
| AGGGTAAAATAAAAAGCCAA+TGG | - | chr6.4:63390079-63390098 | None:intergenic | 30.0% | |
| AGTTCTCATTTGCAAAGATA+TGG | + | chr6.4:63390237-63390256 | MS.gene66321:CDS | 30.0% | |
| ATCATAGCATTTATGTCCTA+TGG | + | chr6.4:63390703-63390722 | MS.gene66321:intron | 30.0% | |
| ATTAGGAAATGCTATTGGAA+AGG | + | chr6.4:63390316-63390335 | MS.gene66321:CDS | 30.0% | |
| CAAATTGAGAAGAATGAAGT+AGG | - | chr6.4:63391488-63391507 | None:intergenic | 30.0% | |
| CAATGACCAAATTGAAAACA+AGG | - | chr6.4:63391391-63391410 | None:intergenic | 30.0% | |
| CATAAAATTCAGGAAAAGCA+TGG | - | chr6.4:63389290-63389309 | None:intergenic | 30.0% | |
| CATATTCTATAACATCAACC+AGG | - | chr6.4:63389553-63389572 | None:intergenic | 30.0% | |
| CTCCAGATTTAAAAGAAGAA+AGG | + | chr6.4:63391174-63391193 | MS.gene66321:CDS | 30.0% | |
| GAGAAAGAGAAATCACATTA+GGG | - | chr6.4:63390754-63390773 | None:intergenic | 30.0% | |
| TAACTAAACCATCCTAAAAG+AGG | - | chr6.4:63389482-63389501 | None:intergenic | 30.0% | |
| TGCAATCTATGCATATTATC+GGG | + | chr6.4:63389808-63389827 | MS.gene66321:intron | 30.0% | |
| TTCAGTATGAAGATGAAGTT+AGG | + | chr6.4:63388857-63388876 | MS.gene66321:CDS | 30.0% | |
| ! | AAATATTGATCTAGCTCGTT+CGG | - | chr6.4:63390593-63390612 | None:intergenic | 30.0% |
| ! | AGTGATTTTGCATTTTCTAG+TGG | + | chr6.4:63389090-63389109 | MS.gene66321:intron | 30.0% |
| ! | CTTTTCCTGAATTTTATGCA+AGG | + | chr6.4:63389292-63389311 | MS.gene66321:intron | 30.0% |
| ! | TTATTTTCTGCGTGTATCTT+AGG | + | chr6.4:63389119-63389138 | MS.gene66321:intron | 30.0% |
| !! | TAAAATAGCCTCTTTTAGGA+TGG | + | chr6.4:63389471-63389490 | MS.gene66321:intron | 30.0% |
| !! | TTTCTGTACTACTTTTCCAT+TGG | + | chr6.4:63390060-63390079 | MS.gene66321:intron | 30.0% |
| !!! | ATATGGCCTTGTTTTCAATT+TGG | + | chr6.4:63391382-63391401 | MS.gene66321:intron | 30.0% |
| !!! | ATTTGTTTTGTGTCATCCTA+GGG | + | chr6.4:63388528-63388547 | MS.gene66321:CDS | 30.0% |
| AAGTAGTGTCAATACTCAGT+AGG | - | chr6.4:63390176-63390195 | None:intergenic | 35.0% | |
| ACACATCTCTTGTTCACAAA+AGG | - | chr6.4:63389218-63389237 | None:intergenic | 35.0% | |
| ACTCATTGTTTGTCTTTGAG+TGG | + | chr6.4:63391342-63391361 | MS.gene66321:intron | 35.0% | |
| AGACAAGTTTCTACTGAAGA+TGG | + | chr6.4:63391299-63391318 | MS.gene66321:CDS | 35.0% | |
| AGTTAAGATTAGGAGGAGAT+TGG | + | chr6.4:63389878-63389897 | MS.gene66321:intron | 35.0% | |
| CAATAGAACTCAACCAGAAA+AGG | - | chr6.4:63390015-63390034 | None:intergenic | 35.0% | |
| CAATAGAACTGGACCATATA+AGG | - | chr6.4:63390099-63390118 | None:intergenic | 35.0% | |
| CTTGTCAATTCTAGACCTTA+AGG | - | chr6.4:63389712-63389731 | None:intergenic | 35.0% | |
| CTTTATGAAGAACTTGATGC+TGG | + | chr6.4:63389154-63389173 | MS.gene66321:CDS | 35.0% | |
| GACACTACTTTCATTTCCTT+AGG | + | chr6.4:63390186-63390205 | MS.gene66321:intron | 35.0% | |
| GAGGAATGTTTATGAAAGAG+CGG | + | chr6.4:63388609-63388628 | MS.gene66321:CDS | 35.0% | |
| GGAGAAAGAGAAATCACATT+AGG | - | chr6.4:63390755-63390774 | None:intergenic | 35.0% | |
| TCTCAAACACCTCTATAAAC+AGG | - | chr6.4:63391127-63391146 | None:intergenic | 35.0% | |
| TCTTGCATCAAACAAAGAAG+AGG | - | chr6.4:63389405-63389424 | None:intergenic | 35.0% | |
| TCTTTGCAAATGAGAACTTC+TGG | - | chr6.4:63390235-63390254 | None:intergenic | 35.0% | |
| TGAGAAACAGTATGGTGATA+GGG | + | chr6.4:63388798-63388817 | MS.gene66321:CDS | 35.0% | |
| TGCATCAAAGATGACAACAA+AGG | - | chr6.4:63390776-63390795 | None:intergenic | 35.0% | |
| TGTCTTTGAGTGGTTTACAA+GGG | + | chr6.4:63391352-63391371 | MS.gene66321:intron | 35.0% | |
| TGTTCTAGTAATGCACCTTA+AGG | + | chr6.4:63389694-63389713 | MS.gene66321:intron | 35.0% | |
| TTCACAATTTGACAGTTAGG+TGG | - | chr6.4:63390801-63390820 | None:intergenic | 35.0% | |
| TTGAGAAACAGTATGGTGAT+AGG | + | chr6.4:63388797-63388816 | MS.gene66321:CDS | 35.0% | |
| TTGAGTTCTATTGCCATCAT+GGG | + | chr6.4:63390022-63390041 | MS.gene66321:intron | 35.0% | |
| TTGGATTAAGTATGCACAGT+GGG | + | chr6.4:63388156-63388175 | MS.gene66321:CDS | 35.0% | |
| TTGTCTTTGAGTGGTTTACA+AGG | + | chr6.4:63391351-63391370 | MS.gene66321:intron | 35.0% | |
| TTTGGATTAAGTATGCACAG+TGG | + | chr6.4:63388155-63388174 | MS.gene66321:CDS | 35.0% | |
| ! | ACTTGCTAGTTAAGATTAGG+AGG | + | chr6.4:63389871-63389890 | MS.gene66321:intron | 35.0% |
| ! | ATAAGATTGGAAGAGAGTGT+CGG | + | chr6.4:63388916-63388935 | MS.gene66321:CDS | 35.0% |
| ! | GCAAGGTTTTTATACCAATG+CGG | + | chr6.4:63389309-63389328 | MS.gene66321:intron | 35.0% |
| ! | GCCCTTTCTTCTTTTAAATC+TGG | - | chr6.4:63391179-63391198 | None:intergenic | 35.0% |
| ! | TGTTTGAGTCTCTGTTTTGT+TGG | + | chr6.4:63389246-63389265 | MS.gene66321:intron | 35.0% |
| !! | GTTTTGTTCTTAACCCTAGT+TGG | - | chr6.4:63387955-63387974 | None:intergenic | 35.0% |
| !! | TGTTTTGAGCCTGTTTATAG+AGG | + | chr6.4:63391115-63391134 | MS.gene66321:intron | 35.0% |
| !!! | GATTTGTTTTGTGTCATCCT+AGG | + | chr6.4:63388527-63388546 | MS.gene66321:CDS | 35.0% |
| !!! | TGTGTGTTTTGATTCATTCG+CGG | + | chr6.4:63389334-63389353 | MS.gene66321:intron | 35.0% |
| AAACAGTATGGTGATAGGGA+AGG | + | chr6.4:63388802-63388821 | MS.gene66321:CDS | 40.0% | |
| AACAGTATGGTGATAGGGAA+GGG | + | chr6.4:63388803-63388822 | MS.gene66321:CDS | 40.0% | |
| AAGAGAAATCACATTAGGGC+AGG | - | chr6.4:63390750-63390769 | None:intergenic | 40.0% | |
| ACATACTTCTCGCACGAATA+AGG | - | chr6.4:63391007-63391026 | None:intergenic | 40.0% | |
| AGAACTTGATGCTGGAGATA+TGG | + | chr6.4:63389162-63389181 | MS.gene66321:CDS | 40.0% | |
| AGAAGAAAGGGCAATGCTAT+TGG | + | chr6.4:63391187-63391206 | MS.gene66321:CDS | 40.0% | |
| AGAGAAATCACATTAGGGCA+GGG | - | chr6.4:63390749-63390768 | None:intergenic | 40.0% | |
| AGCAAATTCTTCGTGAAGCT+AGG | + | chr6.4:63388002-63388021 | MS.gene66321:intron | 40.0% | |
| AGCTTCGAAGAACTTGAGAT+TGG | - | chr6.4:63391567-63391586 | None:intergenic | 40.0% | |
| ATAGAGATAGAACTGCAGCT+TGG | + | chr6.4:63390460-63390479 | MS.gene66321:CDS | 40.0% | |
| ATGCGCTTCAACTTGATTGT+TGG | + | chr6.4:63389570-63389589 | MS.gene66321:intron | 40.0% | |
| ATGCTATTGTTGGGAAGAGA+AGG | + | chr6.4:63388833-63388852 | MS.gene66321:CDS | 40.0% | |
| ATTCATATGGAGGAGATGCT+TGG | + | chr6.4:63388373-63388392 | MS.gene66321:CDS | 40.0% | |
| ATTGGAGAAATGGCTCAACT+TGG | + | chr6.4:63391205-63391224 | MS.gene66321:intron | 40.0% | |
| CACCTGAAAATTGCTATGCA+TGG | + | chr6.4:63390530-63390549 | MS.gene66321:CDS | 40.0% | |
| CACTTGATCATATTCCGAAG+GGG | + | chr6.4:63388740-63388759 | MS.gene66321:CDS | 40.0% | |
| CAGCTGACGTATTTCAAACT+GGG | - | chr6.4:63390273-63390292 | None:intergenic | 40.0% | |
| CAGTAGTAGCACTTCAACTT+TGG | - | chr6.4:63389676-63389695 | None:intergenic | 40.0% | |
| CGGGAATAAGGAAAGAACTA+GGG | + | chr6.4:63388936-63388955 | MS.gene66321:CDS | 40.0% | |
| CTACTGAAGATGGTTCTTCT+AGG | + | chr6.4:63391309-63391328 | MS.gene66321:CDS | 40.0% | |
| CTTACACCTTTCCTCAAACT+CGG | - | chr6.4:63388686-63388705 | None:intergenic | 40.0% | |
| CTTATCGGAACAGGAACAAA+AGG | + | chr6.4:63390974-63390993 | MS.gene66321:CDS | 40.0% | |
| CTTCTCTTCTTGAGCTTCTT+GGG | - | chr6.4:63391281-63391300 | None:intergenic | 40.0% | |
| GAATAAGGAAAGAACTAGGG+AGG | + | chr6.4:63388939-63388958 | MS.gene66321:CDS | 40.0% | |
| GAATGTTTATGAAAGAGCGG+TGG | + | chr6.4:63388612-63388631 | MS.gene66321:CDS | 40.0% | |
| GAGTTTAGACTTATCGGAAC+AGG | + | chr6.4:63390965-63390984 | MS.gene66321:CDS | 40.0% | |
| GCAAATTCTTCGTGAAGCTA+GGG | + | chr6.4:63388003-63388022 | MS.gene66321:intron | 40.0% | |
| GCACTTGATCATATTCCGAA+GGG | + | chr6.4:63388739-63388758 | MS.gene66321:CDS | 40.0% | |
| GCCATTCTTCATCTCAAACT+TGG | - | chr6.4:63388575-63388594 | None:intergenic | 40.0% | |
| GGATTGAGGATGCTATTGTT+GGG | + | chr6.4:63388824-63388843 | MS.gene66321:CDS | 40.0% | |
| GGATTTGTATCGGAAGTTTG+TGG | + | chr6.4:63388771-63388790 | MS.gene66321:CDS | 40.0% | |
| GGCAGCGCTATATTTATTTG+TGG | + | chr6.4:63389013-63389032 | MS.gene66321:CDS | 40.0% | |
| GTAAACGATCGCAATAGAAC+TGG | - | chr6.4:63390110-63390129 | None:intergenic | 40.0% | |
| GTCAACCTCTGAATCAAATG+CGG | - | chr6.4:63389969-63389988 | None:intergenic | 40.0% | |
| GTGGCATTTGAGAAACAGTA+TGG | + | chr6.4:63388790-63388809 | MS.gene66321:CDS | 40.0% | |
| GTTGAGTTCTATTGCCATCA+TGG | + | chr6.4:63390021-63390040 | MS.gene66321:intron | 40.0% | |
| TAATCATGCGCGGAAAGTTT+GGG | + | chr6.4:63388300-63388319 | MS.gene66321:CDS | 40.0% | |
| TCAAAACACACAAACCGCAT+TGG | - | chr6.4:63389326-63389345 | None:intergenic | 40.0% | |
| TCAACTTGGAGGCTTAATCT+GGG | + | chr6.4:63391219-63391238 | MS.gene66321:intron | 40.0% | |
| TCAGCTGACGTATTTCAAAC+TGG | - | chr6.4:63390274-63390293 | None:intergenic | 40.0% | |
| TCATAAACATTCCTCGCCTT+AGG | - | chr6.4:63388604-63388623 | None:intergenic | 40.0% | |
| TCCTAATATTTGACGAGCAC+CGG | - | chr6.4:63390303-63390322 | None:intergenic | 40.0% | |
| TCGGGAATAAGGAAAGAACT+AGG | + | chr6.4:63388935-63388954 | MS.gene66321:CDS | 40.0% | |
| TCTTCGAAGCTGCTTACAAA+TGG | + | chr6.4:63391576-63391595 | MS.gene66321:CDS | 40.0% | |
| TCTTCTCTTCTTGAGCTTCT+TGG | - | chr6.4:63391282-63391301 | None:intergenic | 40.0% | |
| TGAGGTGGAATGTTAGTGTT+TGG | + | chr6.4:63388137-63388156 | MS.gene66321:CDS | 40.0% | |
| TGCACTTGATCATATTCCGA+AGG | + | chr6.4:63388738-63388757 | MS.gene66321:CDS | 40.0% | |
| TGCTCCGTTGTGATTTGAAT+CGG | - | chr6.4:63387986-63388005 | None:intergenic | 40.0% | |
| TGCTTACTTTCATTGCTGCA+TGG | + | chr6.4:63390387-63390406 | MS.gene66321:intron | 40.0% | |
| TGGAAAGGCTCCAAAAGATA+AGG | + | chr6.4:63390331-63390350 | MS.gene66321:CDS | 40.0% | |
| TTAATCATGCGCGGAAAGTT+TGG | + | chr6.4:63388299-63388318 | MS.gene66321:CDS | 40.0% | |
| ! | CACCATGCATAGCAATTTTC+AGG | - | chr6.4:63390535-63390554 | None:intergenic | 40.0% |
| ! | CCTCGAATTCCTTTCTTTTC+CGG | - | chr6.4:63388102-63388121 | None:intergenic | 40.0% |
| ! | GAATCGGTGATTTTCTGCTT+TGG | - | chr6.4:63388055-63388074 | None:intergenic | 40.0% |
| ! | GCCAAGTTTGAGATGAAGAA+TGG | + | chr6.4:63388571-63388590 | MS.gene66321:CDS | 40.0% |
| ! | TGATCGAACAAAGCACTTGA+AGG | + | chr6.4:63390899-63390918 | MS.gene66321:CDS | 40.0% |
| !! | GAGCAAGAGTGCTTTATGAA+AGG | + | chr6.4:63390871-63390890 | MS.gene66321:CDS | 40.0% |
| !! | TAAGATTGGAAGAGAGTGTC+GGG | + | chr6.4:63388917-63388936 | MS.gene66321:CDS | 40.0% |
| !! | TTTTCGAGAGATGGATGAAG+TGG | + | chr6.4:63388419-63388438 | MS.gene66321:CDS | 40.0% |
| !!! | CTTCAGTATCTTTTCGAGTG+AGG | - | chr6.4:63387918-63387937 | None:intergenic | 40.0% |
| !!! | GGATACTGTTTTTAGAGCAG+TGG | + | chr6.4:63389368-63389387 | MS.gene66321:intron | 40.0% |
| !!! | TGATTTTCTGCTTTGGAGGA+CGG | - | chr6.4:63388048-63388067 | None:intergenic | 40.0% |
| !!! | TTTTCGAGTGAGGTAACCTA+GGG | - | chr6.4:63387908-63387927 | None:intergenic | 40.0% |
| AAGACTTCCACGTCCAACTA+GGG | + | chr6.4:63387939-63387958 | MS.gene66321:intron | 45.0% | |
| AATGAGATTGAACGAGCGAG+AGG | + | chr6.4:63388493-63388512 | MS.gene66321:CDS | 45.0% | |
| ACCGGTGCTCGTCAAATATT+AGG | + | chr6.4:63390299-63390318 | MS.gene66321:CDS | 45.0% | |
| AGATTAGGAGGAGATTGGAG+AGG | + | chr6.4:63389883-63389902 | MS.gene66321:intron | 45.0% | |
| AGGATTTAATTCGGCGAGTG+AGG | + | chr6.4:63388119-63388138 | MS.gene66321:CDS | 45.0% | |
| ATACGTCAGCTGAATCTCAC+CGG | + | chr6.4:63390281-63390300 | MS.gene66321:CDS | 45.0% | |
| ATGAGATTGAACGAGCGAGA+GGG | + | chr6.4:63388494-63388513 | MS.gene66321:CDS | 45.0% | |
| ATTTAATTCGGCGAGTGAGG+TGG | + | chr6.4:63388122-63388141 | MS.gene66321:CDS | 45.0% | |
| CAACTTGGAGGCTTAATCTG+GGG | + | chr6.4:63391220-63391239 | MS.gene66321:intron | 45.0% | |
| CCGGAAAAGAAAGGAATTCG+AGG | + | chr6.4:63388099-63388118 | MS.gene66321:CDS | 45.0% | |
| CGCTCCGATTCAAATCACAA+CGG | + | chr6.4:63387979-63387998 | MS.gene66321:intron | 45.0% | |
| CGTTGTGATTTGAATCGGAG+CGG | - | chr6.4:63387981-63388000 | None:intergenic | 45.0% | |
| CTCAACTTGGAGGCTTAATC+TGG | + | chr6.4:63391218-63391237 | MS.gene66321:intron | 45.0% | |
| GATAACCATCCTTGCTGATC+CGG | - | chr6.4:63388448-63388467 | None:intergenic | 45.0% | |
| GCAAATGAGAACTTCTGGTG+AGG | - | chr6.4:63390230-63390249 | None:intergenic | 45.0% | |
| GGGATTGAGGATGCTATTGT+TGG | + | chr6.4:63388823-63388842 | MS.gene66321:CDS | 45.0% | |
| GGGCAATGCTATTGGAGAAA+TGG | + | chr6.4:63391195-63391214 | MS.gene66321:CDS | 45.0% | |
| GTATCGTCTCCGGAAAAGAA+AGG | + | chr6.4:63388090-63388109 | MS.gene66321:CDS | 45.0% | |
| GTTGTGATTTGAATCGGAGC+GGG | - | chr6.4:63387980-63387999 | None:intergenic | 45.0% | |
| TAAGACTTCCACGTCCAACT+AGG | + | chr6.4:63387938-63387957 | MS.gene66321:intron | 45.0% | |
| TCATTCGCGGTTCTTATGCT+GGG | + | chr6.4:63389347-63389366 | MS.gene66321:intron | 45.0% | |
| TGATCATATTCCGAAGGGGA+GGG | + | chr6.4:63388744-63388763 | MS.gene66321:CDS | 45.0% | |
| TGGTTGTCTGTGTTTCCTCA+GGG | - | chr6.4:63391547-63391566 | None:intergenic | 45.0% | |
| TGTACCTTCCACAACAACTC+AGG | - | chr6.4:63390649-63390668 | None:intergenic | 45.0% | |
| TGTTTGTTCTTGCTTGCGAC+TGG | + | chr6.4:63389771-63389790 | MS.gene66321:intron | 45.0% | |
| TTCAGCCGCATTTGATTCAG+AGG | + | chr6.4:63389961-63389980 | MS.gene66321:intron | 45.0% | |
| TTCATTCGCGGTTCTTATGC+TGG | + | chr6.4:63389346-63389365 | MS.gene66321:intron | 45.0% | |
| TTCTTAACCCTAGTTGGACG+TGG | - | chr6.4:63387949-63387968 | None:intergenic | 45.0% | |
| TTGATCATATTCCGAAGGGG+AGG | + | chr6.4:63388743-63388762 | MS.gene66321:CDS | 45.0% | |
| TTGGTTGTCTGTGTTTCCTC+AGG | - | chr6.4:63391548-63391567 | None:intergenic | 45.0% | |
| TTGTGATTTGAATCGGAGCG+GGG | - | chr6.4:63387979-63387998 | None:intergenic | 45.0% | |
| ! | AGAACTTCTGGTGAGGTATC+TGG | - | chr6.4:63390223-63390242 | None:intergenic | 45.0% |
| ! | CATCGACTATCTATTCCCTG+AGG | + | chr6.4:63391529-63391548 | MS.gene66321:CDS | 45.0% |
| ! | CGAGTTTGAGGAAAGGTGTA+AGG | + | chr6.4:63388684-63388703 | MS.gene66321:CDS | 45.0% |
| ! | GAACAAAGCACTTGAAGGCA+TGG | + | chr6.4:63390904-63390923 | MS.gene66321:CDS | 45.0% |
| ! | GGATTTTACACGTGCACGTT+CGG | + | chr6.4:63388192-63388211 | MS.gene66321:CDS | 45.0% |
| ! | GTTTGAGATGAAGAATGGCG+AGG | + | chr6.4:63388576-63388595 | MS.gene66321:CDS | 45.0% |
| ! | GTTTGAGGAAAGGTGTAAGG+AGG | + | chr6.4:63388687-63388706 | MS.gene66321:CDS | 45.0% |
| ! | GTTTTGTGTCATCCTAGGGT+TGG | + | chr6.4:63388532-63388551 | MS.gene66321:CDS | 45.0% |
| ! | TCGGTGATTTTCTGCTTTGG+AGG | - | chr6.4:63388052-63388071 | None:intergenic | 45.0% |
| !! | ATCACCGATTCAACCGAACT+TGG | + | chr6.4:63388064-63388083 | MS.gene66321:CDS | 45.0% |
| !!! | CTTTTCGAGTGAGGTAACCT+AGG | - | chr6.4:63387909-63387928 | None:intergenic | 45.0% |
| AAAGTTGCAGACCCAACCCT+AGG | + | chr6.4:63387889-63387908 | MS.gene66321:CDS | 50.0% | |
| AGATGCTTGGCAATGTTGCG+GGG | + | chr6.4:63388386-63388405 | MS.gene66321:CDS | 50.0% | |
| AGCTAATGTTCCTCCAGCTG+AGG | + | chr6.4:63388978-63388997 | MS.gene66321:CDS | 50.0% | |
| CATGCCTGAGTTGTTGTGGA+AGG | + | chr6.4:63390642-63390661 | MS.gene66321:CDS | 50.0% | |
| CGGCTGAAGAATCAAGAGCA+AGG | - | chr6.4:63389949-63389968 | None:intergenic | 50.0% | |
| CGTTTGCCGAGTTTGAGGAA+AGG | + | chr6.4:63388677-63388696 | MS.gene66321:CDS | 50.0% | |
| CTCGCCAAGTTCGGTTGAAT+CGG | - | chr6.4:63388071-63388090 | None:intergenic | 50.0% | |
| CTGGAGCTGATGATCTGAAG+TGG | - | chr6.4:63391160-63391179 | None:intergenic | 50.0% | |
| GAAGAATGGCGAGGTTCCTA+AGG | + | chr6.4:63388585-63388604 | MS.gene66321:CDS | 50.0% | |
| GAGACGATACTCGCCAAGTT+CGG | - | chr6.4:63388080-63388099 | None:intergenic | 50.0% | |
| GAGATGCTTGGCAATGTTGC+GGG | + | chr6.4:63388385-63388404 | MS.gene66321:CDS | 50.0% | |
| GAGATGGATGAAGTGGATGC+CGG | + | chr6.4:63388426-63388445 | MS.gene66321:CDS | 50.0% | |
| GAGTGAGGTAACCTAGGGTT+GGG | - | chr6.4:63387903-63387922 | None:intergenic | 50.0% | |
| GGAGAAATGGCTCAACTTGG+AGG | + | chr6.4:63391208-63391227 | MS.gene66321:intron | 50.0% | |
| GGAGATGCTTGGCAATGTTG+CGG | + | chr6.4:63388384-63388403 | MS.gene66321:CDS | 50.0% | |
| GGAGGGCTGAGGATTTGTAT+CGG | + | chr6.4:63388761-63388780 | MS.gene66321:CDS | 50.0% | |
| TACACGTGCACGTTCGGTTT+GGG | + | chr6.4:63388198-63388217 | MS.gene66321:CDS | 50.0% | |
| TAGGGTTGGGTCTGCAACTT+TGG | - | chr6.4:63387890-63387909 | None:intergenic | 50.0% | |
| TCTGGTTGAGACACTCCCTA+AGG | - | chr6.4:63390205-63390224 | None:intergenic | 50.0% | |
| TGGACATGCCTGAGTTGTTG+TGG | + | chr6.4:63390638-63390657 | MS.gene66321:CDS | 50.0% | |
| TGGTGATAGGGAAGGGATTG+AGG | + | chr6.4:63388810-63388829 | MS.gene66321:CDS | 50.0% | |
| TGTGATTTGAATCGGAGCGG+GGG | - | chr6.4:63387978-63387997 | None:intergenic | 50.0% | |
| TTACACGTGCACGTTCGGTT+TGG | + | chr6.4:63388197-63388216 | MS.gene66321:CDS | 50.0% | |
| ! | AACTTGGCGAGTATCGTCTC+CGG | + | chr6.4:63388080-63388099 | MS.gene66321:CDS | 50.0% |
| !! | GGAAGAGAGTGTCGGGAATA+AGG | + | chr6.4:63388924-63388943 | MS.gene66321:CDS | 50.0% |
| !! | TTCGGTTTGGGAACGAGCAT+TGG | + | chr6.4:63388210-63388229 | MS.gene66321:CDS | 50.0% |
| !!! | GGAAGCAGAGCTGCTTTTTG+TGG | + | chr6.4:63388654-63388673 | MS.gene66321:CDS | 50.0% |
| AAATCCTCAGCCCTCCCCTT+CGG | - | chr6.4:63388757-63388776 | None:intergenic | 55.0% | |
| AACTCAGGCATGTCCAGTGC+TGG | - | chr6.4:63390634-63390653 | None:intergenic | 55.0% | |
| AAGAGCGGTGGAGAAGCTAG+CGG | + | chr6.4:63388624-63388643 | MS.gene66321:CDS | 55.0% | |
| AAGTGGATGCCGGATCAGCA+AGG | + | chr6.4:63388436-63388455 | MS.gene66321:CDS | 55.0% | |
| ACAGTGGGAAGAGTCGCAGA+AGG | + | chr6.4:63388171-63388190 | MS.gene66321:CDS | 55.0% | |
| CAGCTGAGGAGAAGCGATAC+TGG | + | chr6.4:63388992-63389011 | MS.gene66321:CDS | 55.0% | |
| CAGTATCGCTTCTCCTCAGC+TGG | - | chr6.4:63388994-63389013 | None:intergenic | 55.0% | |
| CGAATCCAAGCACCAACCCT+AGG | - | chr6.4:63388547-63388566 | None:intergenic | 55.0% | |
| CGAGTGAGGTAACCTAGGGT+TGG | - | chr6.4:63387904-63387923 | None:intergenic | 55.0% | |
| GAGGCTTAATCTGGGGAGCT+AGG | + | chr6.4:63391227-63391246 | MS.gene66321:intron | 55.0% | |
| GATGCTTGGCAATGTTGCGG+GGG | + | chr6.4:63388387-63388406 | MS.gene66321:CDS | 55.0% | |
| GCTTCTTGGGCAGCTTAGAC+TGG | - | chr6.4:63391268-63391287 | None:intergenic | 55.0% | |
| GTGATTTGAATCGGAGCGGG+GGG | - | chr6.4:63387977-63387996 | None:intergenic | 55.0% | |
| TACCACAGCTGATCAACCCG+CGG | - | chr6.4:63388346-63388365 | None:intergenic | 55.0% | |
| TATCGCTTCTCCTCAGCTGG+AGG | - | chr6.4:63388991-63389010 | None:intergenic | 55.0% | |
| TGCAATTGCCCAACCAGCAC+TGG | + | chr6.4:63390618-63390637 | MS.gene66321:CDS | 55.0% | |
| TGTGGCGTTTGCCGAGTTTG+AGG | + | chr6.4:63388672-63388691 | MS.gene66321:CDS | 55.0% | |
| ! | GGAGAAGCTAGCGGATGATG+AGG | + | chr6.4:63388633-63388652 | MS.gene66321:CDS | 55.0% |
| !! | AGGCATGTCCAGTGCTGGTT+GGG | - | chr6.4:63390629-63390648 | None:intergenic | 55.0% |
| !! | CGAGGCAGGTTTTCGAGAGA+TGG | + | chr6.4:63388410-63388429 | MS.gene66321:CDS | 55.0% |
| !! | GTCATCCTAGGGTTGGTGCT+TGG | + | chr6.4:63388539-63388558 | MS.gene66321:CDS | 55.0% |
| ATGGCGAGGTTCCTAAGGCG+AGG | + | chr6.4:63388590-63388609 | MS.gene66321:CDS | 60.0% | |
| GGATGCCGGATCAGCAAGGA+TGG | + | chr6.4:63388440-63388459 | MS.gene66321:CDS | 60.0% | |
| GTAAGGAGGCAGAGCGTGCA+AGG | + | chr6.4:63388701-63388720 | MS.gene66321:CDS | 60.0% | |
| TATTCCGAAGGGGAGGGCTG+AGG | + | chr6.4:63388750-63388769 | MS.gene66321:CDS | 60.0% | |
| ! | CGCGGTTACTCTTTTGCCGC+GGG | + | chr6.4:63388327-63388346 | MS.gene66321:CDS | 60.0% |
| ! | GCGCGGTTACTCTTTTGCCG+CGG | + | chr6.4:63388326-63388345 | MS.gene66321:CDS | 60.0% |
| ! | GCGGAAAGTTTGGGATCGCG+CGG | + | chr6.4:63388309-63388328 | MS.gene66321:CDS | 60.0% |
| !! | CAGGCATGTCCAGTGCTGGT+TGG | - | chr6.4:63390630-63390649 | None:intergenic | 60.0% |
| TTGGCAATGTTGCGGGGGCG+AGG | + | chr6.4:63388392-63388411 | MS.gene66321:CDS | 65.0% | |
| !! | TGCCGCGGGTTGATCAGCTG+TGG | + | chr6.4:63388341-63388360 | MS.gene66321:CDS | 65.0% |
| CAATGTTGCGGGGGCGAGGC+AGG | + | chr6.4:63388396-63388415 | MS.gene66321:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 63387877 | 63391631 | 63387877 | ID=MS.gene66321 |
| chr6.4 | mRNA | 63387877 | 63391631 | 63387877 | ID=MS.gene66321.t1;Parent=MS.gene66321 |
| chr6.4 | exon | 63387877 | 63387910 | 63387877 | ID=MS.gene66321.t1.exon1;Parent=MS.gene66321.t1 |
| chr6.4 | CDS | 63387877 | 63387910 | 63387877 | ID=cds.MS.gene66321.t1;Parent=MS.gene66321.t1 |
| chr6.4 | exon | 63388020 | 63389034 | 63388020 | ID=MS.gene66321.t1.exon2;Parent=MS.gene66321.t1 |
| chr6.4 | CDS | 63388020 | 63389034 | 63388020 | ID=cds.MS.gene66321.t1;Parent=MS.gene66321.t1 |
| chr6.4 | exon | 63389141 | 63389206 | 63389141 | ID=MS.gene66321.t1.exon3;Parent=MS.gene66321.t1 |
| chr6.4 | CDS | 63389141 | 63389206 | 63389141 | ID=cds.MS.gene66321.t1;Parent=MS.gene66321.t1 |
| chr6.4 | exon | 63390208 | 63390352 | 63390208 | ID=MS.gene66321.t1.exon4;Parent=MS.gene66321.t1 |
| chr6.4 | CDS | 63390208 | 63390352 | 63390208 | ID=cds.MS.gene66321.t1;Parent=MS.gene66321.t1 |
| chr6.4 | exon | 63390445 | 63390663 | 63390445 | ID=MS.gene66321.t1.exon5;Parent=MS.gene66321.t1 |
| chr6.4 | CDS | 63390445 | 63390663 | 63390445 | ID=cds.MS.gene66321.t1;Parent=MS.gene66321.t1 |
| chr6.4 | exon | 63390831 | 63391020 | 63390831 | ID=MS.gene66321.t1.exon6;Parent=MS.gene66321.t1 |
| chr6.4 | CDS | 63390831 | 63391020 | 63390831 | ID=cds.MS.gene66321.t1;Parent=MS.gene66321.t1 |
| chr6.4 | exon | 63391135 | 63391216 | 63391135 | ID=MS.gene66321.t1.exon7;Parent=MS.gene66321.t1 |
| chr6.4 | CDS | 63391135 | 63391216 | 63391135 | ID=cds.MS.gene66321.t1;Parent=MS.gene66321.t1 |
| chr6.4 | exon | 63391259 | 63391330 | 63391259 | ID=MS.gene66321.t1.exon8;Parent=MS.gene66321.t1 |
| chr6.4 | CDS | 63391259 | 63391330 | 63391259 | ID=cds.MS.gene66321.t1;Parent=MS.gene66321.t1 |
| chr6.4 | exon | 63391517 | 63391631 | 63391517 | ID=MS.gene66321.t1.exon9;Parent=MS.gene66321.t1 |
| chr6.4 | CDS | 63391517 | 63391631 | 63391517 | ID=cds.MS.gene66321.t1;Parent=MS.gene66321.t1 |
| Gene Sequence |
| Protein sequence |
