Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22321.t1 | XP_004495196.1 | 86.9 | 696 | 47 | 2 | 1 | 652 | 1 | 696 | 1.00E-222 | 783.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22321.t1 | P17886 | 54.9 | 680 | 249 | 7 | 22 | 652 | 6 | 676 | 1.2e-91 | 339.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22321.t1 | A0A1S2XVN9 | 86.9 | 696 | 47 | 2 | 1 | 652 | 1 | 696 | 7.2e-223 | 783.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049129 | MS.gene22321 | -0.800826 | 1.20E-48 | -1.69E-46 |
| MS.gene049142 | MS.gene22321 | 0.845394 | 4.17E-59 | -1.69E-46 |
| MS.gene049159 | MS.gene22321 | 0.80898 | 2.37E-50 | -1.69E-46 |
| MS.gene049255 | MS.gene22321 | 0.812738 | 3.65E-51 | -1.69E-46 |
| MS.gene049283 | MS.gene22321 | 0.824389 | 8.29E-54 | -1.69E-46 |
| MS.gene049368 | MS.gene22321 | 0.855008 | 8.42E-62 | -1.69E-46 |
| MS.gene049411 | MS.gene22321 | 0.864377 | 1.27E-64 | -1.69E-46 |
| MS.gene049807 | MS.gene22321 | 0.806914 | 6.53E-50 | -1.69E-46 |
| MS.gene049887 | MS.gene22321 | 0.801835 | 7.47E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene22321 | 0.823836 | 1.12E-53 | -1.69E-46 |
| MS.gene050084 | MS.gene22321 | 0.854806 | 9.63E-62 | -1.69E-46 |
| MS.gene050085 | MS.gene22321 | 0.88636 | 3.66E-72 | -1.69E-46 |
| MS.gene050213 | MS.gene22321 | 0.805871 | 1.08E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene22321 | 0.802407 | 5.69E-49 | -1.69E-46 |
| MS.gene050359 | MS.gene22321 | 0.809118 | 2.22E-50 | -1.69E-46 |
| MS.gene050384 | MS.gene22321 | 0.85334 | 2.55E-61 | -1.69E-46 |
| MS.gene050386 | MS.gene22321 | 0.854987 | 8.53E-62 | -1.69E-46 |
| MS.gene050437 | MS.gene22321 | 0.801309 | 9.57E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene22321 | 0.864874 | 8.88E-65 | -1.69E-46 |
| MS.gene050646 | MS.gene22321 | 0.869783 | 2.39E-66 | -1.69E-46 |
| MS.gene050654 | MS.gene22321 | 0.846989 | 1.54E-59 | -1.69E-46 |
| MS.gene050689 | MS.gene22321 | 0.920074 | 2.03E-87 | -1.69E-46 |
| MS.gene050752 | MS.gene22321 | 0.827079 | 1.91E-54 | -1.69E-46 |
| MS.gene050838 | MS.gene22321 | 0.89763 | 1.17E-76 | -1.69E-46 |
| MS.gene050931 | MS.gene22321 | 0.819482 | 1.13E-52 | -1.69E-46 |
| MS.gene050945 | MS.gene22321 | 0.867688 | 1.14E-65 | -1.69E-46 |
| MS.gene051003 | MS.gene22321 | 0.890076 | 1.37E-73 | -1.69E-46 |
| MS.gene051102 | MS.gene22321 | 0.835424 | 1.69E-56 | -1.69E-46 |
| MS.gene051233 | MS.gene22321 | 0.839154 | 1.88E-57 | -1.69E-46 |
| MS.gene051234 | MS.gene22321 | 0.879217 | 1.49E-69 | -1.69E-46 |
| MS.gene051328 | MS.gene22321 | 0.8104 | 1.17E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene22321 | 0.910328 | 2.12E-82 | -1.69E-46 |
| MS.gene05134 | MS.gene22321 | 0.813719 | 2.22E-51 | -1.69E-46 |
| MS.gene051363 | MS.gene22321 | 0.838656 | 2.53E-57 | -1.69E-46 |
| MS.gene051365 | MS.gene22321 | 0.852836 | 3.55E-61 | -1.69E-46 |
| MS.gene051381 | MS.gene22321 | 0.855506 | 6.03E-62 | -1.69E-46 |
| MS.gene051382 | MS.gene22321 | 0.805937 | 1.05E-49 | -1.69E-46 |
| MS.gene051642 | MS.gene22321 | 0.83708 | 6.42E-57 | -1.69E-46 |
| MS.gene051676 | MS.gene22321 | 0.820835 | 5.56E-53 | -1.69E-46 |
| MS.gene051701 | MS.gene22321 | 0.80707 | 6.05E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene22321 | 0.80842 | 3.12E-50 | -1.69E-46 |
| MS.gene051856 | MS.gene22321 | 0.801024 | 1.09E-48 | -1.69E-46 |
| MS.gene05188 | MS.gene22321 | 0.84108 | 5.90E-58 | -1.69E-46 |
| MS.gene051902 | MS.gene22321 | 0.864656 | 1.04E-64 | -1.69E-46 |
| MS.gene051975 | MS.gene22321 | 0.876641 | 1.19E-68 | -1.69E-46 |
| MS.gene052036 | MS.gene22321 | 0.808169 | 3.53E-50 | -1.69E-46 |
| MS.gene052072 | MS.gene22321 | 0.896762 | 2.70E-76 | -1.69E-46 |
| MS.gene052242 | MS.gene22321 | -0.807711 | 4.42E-50 | -1.69E-46 |
| MS.gene052307 | MS.gene22321 | 0.870579 | 1.31E-66 | -1.69E-46 |
| MS.gene052335 | MS.gene22321 | 0.83921 | 1.82E-57 | -1.69E-46 |
| MS.gene052342 | MS.gene22321 | 0.861717 | 8.43E-64 | -1.69E-46 |
| MS.gene052397 | MS.gene22321 | 0.835943 | 1.25E-56 | -1.69E-46 |
| MS.gene052434 | MS.gene22321 | 0.839821 | 1.26E-57 | -1.69E-46 |
| MS.gene052516 | MS.gene22321 | 0.822092 | 2.85E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene22321 | 0.881345 | 2.59E-70 | -1.69E-46 |
| MS.gene052932 | MS.gene22321 | 0.819167 | 1.34E-52 | -1.69E-46 |
| MS.gene052947 | MS.gene22321 | 0.811806 | 5.82E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene22321 | 0.810204 | 1.29E-50 | -1.69E-46 |
| MS.gene053058 | MS.gene22321 | 0.898092 | 7.44E-77 | -1.69E-46 |
| MS.gene053079 | MS.gene22321 | 0.85468 | 1.05E-61 | -1.69E-46 |
| MS.gene053122 | MS.gene22321 | 0.820133 | 8.06E-53 | -1.69E-46 |
| MS.gene053143 | MS.gene22321 | 0.835839 | 1.33E-56 | -1.69E-46 |
| MS.gene05315 | MS.gene22321 | 0.811584 | 6.51E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene22321 | 0.81566 | 8.25E-52 | -1.69E-46 |
| MS.gene053381 | MS.gene22321 | 0.802081 | 6.64E-49 | -1.69E-46 |
| MS.gene053541 | MS.gene22321 | 0.823404 | 1.41E-53 | -1.69E-46 |
| MS.gene053542 | MS.gene22321 | 0.83585 | 1.32E-56 | -1.69E-46 |
| MS.gene053564 | MS.gene22321 | 0.831283 | 1.82E-55 | -1.69E-46 |
| MS.gene05364 | MS.gene22321 | 0.866684 | 2.38E-65 | -1.69E-46 |
| MS.gene053931 | MS.gene22321 | 0.822412 | 2.40E-53 | -1.69E-46 |
| MS.gene054004 | MS.gene22321 | 0.860927 | 1.47E-63 | -1.69E-46 |
| MS.gene054403 | MS.gene22321 | 0.825224 | 5.27E-54 | -1.69E-46 |
| MS.gene054413 | MS.gene22321 | 0.831175 | 1.94E-55 | -1.69E-46 |
| MS.gene054709 | MS.gene22321 | 0.814593 | 1.42E-51 | -1.69E-46 |
| MS.gene054823 | MS.gene22321 | 0.812432 | 4.25E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene22321 | 0.826969 | 2.03E-54 | -1.69E-46 |
| MS.gene055311 | MS.gene22321 | 0.843301 | 1.52E-58 | -1.69E-46 |
| MS.gene055313 | MS.gene22321 | 0.829221 | 5.81E-55 | -1.69E-46 |
| MS.gene055314 | MS.gene22321 | 0.826623 | 2.45E-54 | -1.69E-46 |
| MS.gene055424 | MS.gene22321 | 0.813796 | 2.14E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene22321 | 0.810608 | 1.06E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene22321 | 0.87154 | 6.32E-67 | -1.69E-46 |
| MS.gene055841 | MS.gene22321 | 0.812361 | 4.41E-51 | -1.69E-46 |
| MS.gene055979 | MS.gene22321 | 0.821593 | 3.72E-53 | -1.69E-46 |
| MS.gene056045 | MS.gene22321 | 0.845279 | 4.48E-59 | -1.69E-46 |
| MS.gene056097 | MS.gene22321 | 0.839536 | 1.49E-57 | -1.69E-46 |
| MS.gene056181 | MS.gene22321 | 0.877841 | 4.55E-69 | -1.69E-46 |
| MS.gene056215 | MS.gene22321 | 0.814135 | 1.80E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene22321 | 0.846982 | 1.54E-59 | -1.69E-46 |
| MS.gene056403 | MS.gene22321 | 0.803503 | 3.38E-49 | -1.69E-46 |
| MS.gene05648 | MS.gene22321 | 0.801035 | 1.09E-48 | -1.69E-46 |
| MS.gene056507 | MS.gene22321 | 0.806607 | 7.58E-50 | -1.69E-46 |
| MS.gene056578 | MS.gene22321 | 0.853424 | 2.41E-61 | -1.69E-46 |
| MS.gene056580 | MS.gene22321 | 0.810359 | 1.20E-50 | -1.69E-46 |
| MS.gene056632 | MS.gene22321 | 0.823274 | 1.51E-53 | -1.69E-46 |
| MS.gene056699 | MS.gene22321 | 0.82465 | 7.20E-54 | -1.69E-46 |
| MS.gene056787 | MS.gene22321 | 0.841917 | 3.55E-58 | -1.69E-46 |
| MS.gene056986 | MS.gene22321 | 0.851772 | 7.14E-61 | -1.69E-46 |
| MS.gene057034 | MS.gene22321 | 0.829762 | 4.29E-55 | -1.69E-46 |
| MS.gene057094 | MS.gene22321 | 0.805826 | 1.11E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene22321 | 0.857914 | 1.18E-62 | -1.69E-46 |
| MS.gene057131 | MS.gene22321 | 0.802503 | 5.44E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene22321 | 0.816717 | 4.79E-52 | -1.69E-46 |
| MS.gene057234 | MS.gene22321 | 0.821444 | 4.02E-53 | -1.69E-46 |
| MS.gene057320 | MS.gene22321 | 0.811865 | 5.65E-51 | -1.69E-46 |
| MS.gene057360 | MS.gene22321 | 0.800976 | 1.12E-48 | -1.69E-46 |
| MS.gene057392 | MS.gene22321 | 0.803982 | 2.69E-49 | -1.69E-46 |
| MS.gene057446 | MS.gene22321 | 0.812391 | 4.34E-51 | -1.69E-46 |
| MS.gene057694 | MS.gene22321 | 0.817957 | 2.52E-52 | -1.69E-46 |
| MS.gene057705 | MS.gene22321 | 0.832238 | 1.06E-55 | -1.69E-46 |
| MS.gene05781 | MS.gene22321 | 0.83941 | 1.61E-57 | -1.69E-46 |
| MS.gene057890 | MS.gene22321 | -0.848685 | 5.24E-60 | -1.69E-46 |
| MS.gene057915 | MS.gene22321 | 0.806003 | 1.02E-49 | -1.69E-46 |
| MS.gene057999 | MS.gene22321 | 0.818211 | 2.21E-52 | -1.69E-46 |
| MS.gene058008 | MS.gene22321 | 0.813168 | 2.93E-51 | -1.69E-46 |
| MS.gene058009 | MS.gene22321 | 0.803882 | 2.82E-49 | -1.69E-46 |
| MS.gene058054 | MS.gene22321 | 0.842059 | 3.26E-58 | -1.69E-46 |
| MS.gene058055 | MS.gene22321 | 0.827341 | 1.65E-54 | -1.69E-46 |
| MS.gene058074 | MS.gene22321 | 0.801692 | 7.99E-49 | -1.69E-46 |
| MS.gene058126 | MS.gene22321 | 0.827035 | 1.95E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene22321 | 0.835305 | 1.81E-56 | -1.69E-46 |
| MS.gene058261 | MS.gene22321 | 0.825767 | 3.92E-54 | -1.69E-46 |
| MS.gene058292 | MS.gene22321 | 0.871076 | 9.00E-67 | -1.69E-46 |
| MS.gene058638 | MS.gene22321 | 0.806212 | 9.18E-50 | -1.69E-46 |
| MS.gene058639 | MS.gene22321 | 0.814239 | 1.70E-51 | -1.69E-46 |
| MS.gene058646 | MS.gene22321 | 0.82021 | 7.74E-53 | -1.69E-46 |
| MS.gene058781 | MS.gene22321 | 0.826385 | 2.79E-54 | -1.69E-46 |
| MS.gene058783 | MS.gene22321 | 0.808186 | 3.50E-50 | -1.69E-46 |
| MS.gene058976 | MS.gene22321 | 0.857956 | 1.15E-62 | -1.69E-46 |
| MS.gene059007 | MS.gene22321 | 0.830912 | 2.25E-55 | -1.69E-46 |
| MS.gene059146 | MS.gene22321 | 0.901076 | 3.86E-78 | -1.69E-46 |
| MS.gene059170 | MS.gene22321 | 0.808242 | 3.41E-50 | -1.69E-46 |
| MS.gene059171 | MS.gene22321 | 0.81668 | 4.88E-52 | -1.69E-46 |
| MS.gene059227 | MS.gene22321 | 0.815133 | 1.08E-51 | -1.69E-46 |
| MS.gene059778 | MS.gene22321 | 0.840284 | 9.54E-58 | -1.69E-46 |
| MS.gene05978 | MS.gene22321 | 0.892063 | 2.24E-74 | -1.69E-46 |
| MS.gene059842 | MS.gene22321 | 0.800282 | 1.55E-48 | -1.69E-46 |
| MS.gene05985 | MS.gene22321 | -0.827315 | 1.67E-54 | -1.69E-46 |
| MS.gene059965 | MS.gene22321 | 0.823841 | 1.11E-53 | -1.69E-46 |
| MS.gene060085 | MS.gene22321 | 0.805301 | 1.43E-49 | -1.69E-46 |
| MS.gene06011 | MS.gene22321 | 0.811029 | 8.59E-51 | -1.69E-46 |
| MS.gene060244 | MS.gene22321 | 0.813922 | 2.00E-51 | -1.69E-46 |
| MS.gene060296 | MS.gene22321 | 0.823331 | 1.47E-53 | -1.69E-46 |
| MS.gene060343 | MS.gene22321 | -0.820288 | 7.42E-53 | -1.69E-46 |
| MS.gene060365 | MS.gene22321 | 0.828746 | 7.57E-55 | -1.69E-46 |
| MS.gene060587 | MS.gene22321 | 0.801995 | 6.92E-49 | -1.69E-46 |
| MS.gene060763 | MS.gene22321 | 0.854004 | 1.64E-61 | -1.69E-46 |
| MS.gene060933 | MS.gene22321 | 0.857151 | 1.98E-62 | -1.69E-46 |
| MS.gene060935 | MS.gene22321 | 0.871427 | 6.89E-67 | -1.69E-46 |
| MS.gene060937 | MS.gene22321 | 0.87518 | 3.77E-68 | -1.69E-46 |
| MS.gene061006 | MS.gene22321 | 0.850538 | 1.59E-60 | -1.69E-46 |
| MS.gene061100 | MS.gene22321 | 0.86771 | 1.12E-65 | -1.69E-46 |
| MS.gene061160 | MS.gene22321 | 0.805197 | 1.50E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22321.t1 | MTR_5g009520 | 93.353 | 692 | 3 | 1 | 1 | 649 | 1 | 692 | 0.0 | 1279 |
| MS.gene22321.t1 | MTR_6g090890 | 88.075 | 696 | 38 | 3 | 1 | 652 | 1 | 695 | 0.0 | 1217 |
| MS.gene22321.t1 | MTR_4g119010 | 59.280 | 361 | 112 | 8 | 299 | 648 | 83 | 419 | 2.11e-127 | 383 |
| MS.gene22321.t1 | MTR_4g119010 | 31.804 | 327 | 193 | 12 | 10 | 318 | 5 | 319 | 8.94e-29 | 119 |
| MS.gene22321.t1 | MTR_4g118885 | 58.239 | 352 | 97 | 5 | 329 | 634 | 82 | 429 | 1.61e-120 | 365 |
| MS.gene22321.t1 | MTR_4g118885 | 30.383 | 339 | 202 | 11 | 7 | 318 | 2 | 333 | 1.02e-28 | 119 |
| MS.gene22321.t1 | MTR_4g011050 | 59.322 | 118 | 29 | 2 | 268 | 366 | 13 | 130 | 1.91e-35 | 131 |
| MS.gene22321.t1 | MTR_2g012310 | 26.384 | 307 | 182 | 11 | 92 | 364 | 436 | 732 | 4.66e-16 | 82.8 |
| MS.gene22321.t1 | MTR_2g012310 | 25.911 | 247 | 172 | 5 | 90 | 325 | 526 | 772 | 6.98e-15 | 79.0 |
| MS.gene22321.t1 | MTR_7g068630 | 22.907 | 454 | 287 | 16 | 84 | 503 | 445 | 869 | 3.34e-12 | 70.5 |
| MS.gene22321.t1 | MTR_6g026900 | 25.121 | 207 | 144 | 5 | 113 | 313 | 254 | 455 | 4.47e-11 | 66.6 |
| MS.gene22321.t1 | MTR_1g011710 | 23.438 | 384 | 255 | 15 | 90 | 464 | 315 | 668 | 5.14e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22321.t1 | AT5G41770 | 75.641 | 702 | 120 | 2 | 2 | 652 | 3 | 704 | 0.0 | 1057 |
| MS.gene22321.t1 | AT5G45990 | 71.930 | 684 | 139 | 3 | 7 | 646 | 4 | 678 | 0.0 | 974 |
| MS.gene22321.t1 | AT5G45990 | 72.230 | 677 | 135 | 3 | 14 | 646 | 1 | 668 | 0.0 | 966 |
| MS.gene22321.t1 | AT3G13210 | 64.173 | 695 | 157 | 4 | 1 | 647 | 1 | 651 | 0.0 | 844 |
| MS.gene22321.t1 | AT3G51110 | 65.586 | 401 | 92 | 4 | 26 | 380 | 5 | 405 | 0.0 | 527 |
| MS.gene22321.t1 | AT3G51110 | 27.864 | 323 | 192 | 12 | 324 | 638 | 55 | 344 | 1.30e-22 | 101 |
| MS.gene22321.t1 | AT3G51110 | 27.968 | 379 | 203 | 13 | 160 | 517 | 72 | 401 | 1.83e-20 | 94.7 |
| MS.gene22321.t1 | AT5G28740 | 25.649 | 308 | 185 | 12 | 92 | 365 | 424 | 721 | 1.56e-15 | 81.3 |
| MS.gene22321.t1 | AT4G03430 | 23.448 | 435 | 291 | 13 | 84 | 504 | 444 | 850 | 5.28e-14 | 76.3 |
| MS.gene22321.t1 | AT4G03430 | 23.448 | 435 | 291 | 13 | 84 | 504 | 444 | 850 | 5.28e-14 | 76.3 |
| MS.gene22321.t1 | AT4G03430 | 23.448 | 435 | 291 | 13 | 84 | 504 | 444 | 850 | 5.28e-14 | 76.3 |
| MS.gene22321.t1 | AT1G17760 | 26.442 | 208 | 144 | 5 | 114 | 317 | 255 | 457 | 1.96e-13 | 74.3 |
| MS.gene22321.t1 | AT3G17040 | 20.533 | 375 | 247 | 11 | 104 | 475 | 215 | 541 | 7.07e-11 | 65.9 |
| MS.gene22321.t1 | AT3G17040 | 20.533 | 375 | 247 | 11 | 104 | 475 | 181 | 507 | 7.76e-11 | 65.9 |
Find 154 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTCTTCTTGAGCTTCT+TGG | 0.162393 | 5.4:+4138615 | None:intergenic |
| ACGGGTGCTCGTCAAATATT+AGG | 0.182901 | 5.4:-4139604 | MS.gene22321:CDS |
| TACACGTGCGCGTTCGGTTT+GGG | 0.226321 | 5.4:-4143243 | MS.gene22321:CDS |
| AAAACTATATGAAAAGTATT+TGG | 0.269243 | 5.4:-4139398 | MS.gene22321:CDS |
| TAGTATGTTACCTTATCTTT+AGG | 0.282919 | 5.4:+4139562 | None:intergenic |
| TAGTGTTGGGTCTGCATCTT+TGG | 0.283300 | 5.4:+4143553 | None:intergenic |
| CTCAACTTGGAGGCTTCATC+TGG | 0.300668 | 5.4:-4138676 | MS.gene22321:CDS |
| CTTCTCTTCTTGAGCTTCTT+GGG | 0.305265 | 5.4:+4138616 | None:intergenic |
| TTACACGTGCGCGTTCGGTT+TGG | 0.307935 | 5.4:-4143244 | MS.gene22321:CDS |
| CTACTGAAGATGGTTCTTCT+AGG | 0.309477 | 5.4:-4138585 | MS.gene22321:intron |
| AGATGAGAGTTTAGAATTAT+CGG | 0.314452 | 5.4:-4138933 | MS.gene22321:CDS |
| AGTTCTCATTTGCAAAGATA+TGG | 0.344500 | 5.4:-4139666 | MS.gene22321:CDS |
| TTAATCATGCGAGGAATGTT+TGG | 0.350016 | 5.4:-4143142 | MS.gene22321:CDS |
| GAGATGCTTGGCAATGTCGC+TGG | 0.357091 | 5.4:-4143056 | MS.gene22321:CDS |
| TGCTCCGCTGTGATTTGAAT+TGG | 0.358671 | 5.4:+4143458 | None:intergenic |
| TTCGGTGGAATGTCAGTGTT+TGG | 0.362517 | 5.4:-4143304 | MS.gene22321:CDS |
| TCTTTGCAAATGAGAACTTC+TGG | 0.364205 | 5.4:+4139671 | None:intergenic |
| TCAGCTGACGTATTTCAAAC+TGG | 0.364851 | 5.4:+4139632 | None:intergenic |
| AGGATTTAATCCGGAGAGTT+CGG | 0.371102 | 5.4:-4143322 | MS.gene22321:CDS |
| CAATGTCGCTGGGGCGAGGC+AGG | 0.375002 | 5.4:-4143045 | MS.gene22321:CDS |
| CAAATATTAGGGAATGCTAT+TGG | 0.375651 | 5.4:-4139592 | MS.gene22321:CDS |
| GCTTCTTGGGCAGCTTAGAC+TGG | 0.380324 | 5.4:+4138629 | None:intergenic |
| AGAACTTCTGGTGAGGTATC+TGG | 0.391393 | 5.4:+4139683 | None:intergenic |
| ATCCGTTGAATTATGATTCG+TGG | 0.398953 | 5.4:-4142557 | MS.gene22321:intron |
| TTGAGAAACAGTATGGTGAT+AGG | 0.405534 | 5.4:-4142644 | MS.gene22321:CDS |
| TAATCATGCGAGGAATGTTT+GGG | 0.406922 | 5.4:-4143141 | MS.gene22321:CDS |
| TCTCAAATGCCACAAACTTC+CGG | 0.412003 | 5.4:+4142661 | None:intergenic |
| GGCTTCCATGATCTTGAGAT+TGG | 0.414299 | 5.4:+4138304 | None:intergenic |
| AGGCATGTCCAATGCTGGTT+GGG | 0.424214 | 5.4:+4139273 | None:intergenic |
| TGATCGAACAAAGCACTTGA+AGG | 0.427591 | 5.4:-4138993 | MS.gene22321:CDS |
| GGGATTGAGGATGCTATTGT+TGG | 0.433244 | 5.4:-4142618 | MS.gene22321:CDS |
| TGCAATTGCCCAACCAGCAT+TGG | 0.442244 | 5.4:-4139281 | MS.gene22321:CDS |
| GGGCAATGCTATTAGAGAAA+TGG | 0.442491 | 5.4:-4138699 | MS.gene22321:CDS |
| TCATGGAAGCCGCTTACAAA+TGG | 0.446443 | 5.4:-4138292 | MS.gene22321:CDS |
| AGATGCTTGGCAATGTCGCT+GGG | 0.449067 | 5.4:-4143055 | MS.gene22321:CDS |
| GGAGTTTGAGGAAAGGTGTA+AGG | 0.453060 | 5.4:-4142757 | MS.gene22321:CDS |
| TTCGGTTTGGGAACGAGCAT+TGG | 0.457130 | 5.4:-4143231 | MS.gene22321:CDS |
| TCAACTTGGAGGCTTCATCT+GGG | 0.458678 | 5.4:-4138675 | MS.gene22321:CDS |
| GAGGCTTCATCTGGGGAGCT+AGG | 0.458747 | 5.4:-4138667 | MS.gene22321:CDS |
| GATAACCATCCTTGCTGATC+CGG | 0.459943 | 5.4:+4142996 | None:intergenic |
| TGTGGCGTTTGCGGAGTTTG+AGG | 0.461569 | 5.4:-4142769 | MS.gene22321:CDS |
| CTCGCCGAGTTCGGTTGAAT+CGG | 0.463406 | 5.4:+4143373 | None:intergenic |
| TTGGTTGAATGTGTTTCCTC+GGG | 0.468573 | 5.4:+4138323 | None:intergenic |
| TTGGCAATGTCGCTGGGGCG+AGG | 0.468746 | 5.4:-4143049 | MS.gene22321:CDS |
| TCCAGATTTAAAAGAAGAAA+GGG | 0.469041 | 5.4:-4138719 | MS.gene22321:CDS |
| CTCCAGATTTAAAAGAAGAA+AGG | 0.471933 | 5.4:-4138720 | MS.gene22321:CDS |
| CGCTGTGATTTGAATTGGAG+CGG | 0.473589 | 5.4:+4143463 | None:intergenic |
| GTGGCATTTGAGAAACAGTA+TGG | 0.475591 | 5.4:-4142651 | MS.gene22321:CDS |
| TGCCTGTTTAGAGGTGTTTG+AGG | 0.476347 | 5.4:-4138770 | MS.gene22321:intron |
| GGATTTGTACCGGAAGTTTG+TGG | 0.478503 | 5.4:-4142670 | MS.gene22321:CDS |
| GTAAGGAGGCAGAGCGTGCT+AGG | 0.478780 | 5.4:-4142740 | MS.gene22321:CDS |
| TGGTGATAGGGAAGGGATTG+AGG | 0.479307 | 5.4:-4142631 | MS.gene22321:CDS |
| TCAAGCTTCCACGTCCAACT+AGG | 0.480728 | 5.4:-4143502 | MS.gene22321:CDS |
| AGACAAGTTTCTACTGAAGA+TGG | 0.481734 | 5.4:-4138595 | MS.gene22321:CDS |
| TCATAAACATTCCTCGCCTT+AGG | 0.481974 | 5.4:+4142840 | None:intergenic |
| GAGACGATACTCGCCGAGTT+CGG | 0.482763 | 5.4:+4143364 | None:intergenic |
| CGGGTGCTCGTCAAATATTA+GGG | 0.485586 | 5.4:-4139603 | MS.gene22321:CDS |
| TTCAACCAATCTCAAGATCA+TGG | 0.485593 | 5.4:-4138309 | MS.gene22321:CDS |
| ATTATCGGAACAAGAACAAA+AGG | 0.485892 | 5.4:-4138918 | MS.gene22321:CDS |
| AGGAATTCGAGGATTTAATC+CGG | 0.486582 | 5.4:-4143331 | MS.gene22321:CDS |
| GAGTGAGATAACCTAGTGTT+GGG | 0.489261 | 5.4:+4143540 | None:intergenic |
| AAATCCTCAGCCCTCCCCTT+CGG | 0.491990 | 5.4:+4142687 | None:intergenic |
| GTCATCCTAGGGTTGGTGCT+TGG | 0.492213 | 5.4:-4142902 | MS.gene22321:CDS |
| AACAGTATGGTGATAGGGAA+GGG | 0.497023 | 5.4:-4142638 | MS.gene22321:CDS |
| CGAGTGAGATAACCTAGTGT+TGG | 0.498350 | 5.4:+4143539 | None:intergenic |
| AGCAAATTCTTCGTGAAGCT+AGG | 0.502033 | 5.4:-4143439 | MS.gene22321:CDS |
| AACTCAGGCATGTCCAATGC+TGG | 0.504518 | 5.4:+4139268 | None:intergenic |
| ATTGGTTGAATGTGTTTCCT+CGG | 0.509385 | 5.4:+4138322 | None:intergenic |
| GAAGAATGGCGAGGTTCCTA+AGG | 0.514090 | 5.4:-4142856 | MS.gene22321:CDS |
| GCTGTGATTTGAATTGGAGC+GGG | 0.516717 | 5.4:+4143464 | None:intergenic |
| TGCGGTTACTCTCTTGCCGC+GGG | 0.517611 | 5.4:-4143114 | MS.gene22321:CDS |
| CAGCTGACGTATTTCAAACT+GGG | 0.517928 | 5.4:+4139633 | None:intergenic |
| ATGCTATTGTTGGGAAGAGA+AGG | 0.518921 | 5.4:-4142608 | MS.gene22321:CDS |
| GTATCGTCTCCGGAAAAGAA+AGG | 0.519406 | 5.4:-4143351 | MS.gene22321:CDS |
| GTGGTATAAGTATATTCATA+TGG | 0.521111 | 5.4:-4143081 | MS.gene22321:CDS |
| ATTAGAGAAATGGCTCAACT+TGG | 0.521804 | 5.4:-4138689 | MS.gene22321:CDS |
| ATCACCGATTCAACCGAACT+CGG | 0.523459 | 5.4:-4143377 | MS.gene22321:CDS |
| CTCTATGAAGAACTCGATGC+TGG | 0.524471 | 5.4:-4142290 | MS.gene22321:CDS |
| TGGAAAGGCTCCTAAAGATA+AGG | 0.526946 | 5.4:-4139572 | MS.gene22321:intron |
| TGAGAAACAGTATGGTGATA+GGG | 0.526975 | 5.4:-4142643 | MS.gene22321:CDS |
| AGAGAAATGGCTCAACTTGG+AGG | 0.527102 | 5.4:-4138686 | MS.gene22321:CDS |
| CCGGAAAAGAAAGGAATTCG+AGG | 0.534313 | 5.4:-4143342 | MS.gene22321:CDS |
| GAACAAAGCACTTGAAGGTA+TGG | 0.535144 | 5.4:-4138988 | MS.gene22321:CDS |
| CAAGCTTCCACGTCCAACTA+GGG | 0.535750 | 5.4:-4143501 | MS.gene22321:CDS |
| TGACATTCCACCGAACTCTC+CGG | 0.537024 | 5.4:+4143312 | None:intergenic |
| CAGGCATGTCCAATGCTGGT+TGG | 0.538335 | 5.4:+4139272 | None:intergenic |
| GCGAAGTTTGAGATGAAGAA+TGG | 0.539929 | 5.4:-4142870 | MS.gene22321:CDS |
| AAACAGTATGGTGATAGGGA+AGG | 0.543304 | 5.4:-4142639 | MS.gene22321:CDS |
| GGATTGAGGATGCTATTGTT+GGG | 0.544390 | 5.4:-4142617 | MS.gene22321:CDS |
| ATTCATATGGAGGAGATGCT+TGG | 0.545848 | 5.4:-4143068 | MS.gene22321:CDS |
| GAGCAAGAGCGCTTTATGAA+AGG | 0.547966 | 5.4:-4139021 | MS.gene22321:CDS |
| TGCACTTGATCATATTCCGA+AGG | 0.550436 | 5.4:-4142703 | MS.gene22321:CDS |
| TTGCTTCTTCCATTTGTAAG+CGG | 0.551687 | 5.4:+4138283 | None:intergenic |
| TGGACATGCCTGAGTTGTTG+TGG | 0.557171 | 5.4:-4139261 | MS.gene22321:CDS |
| TTGGATTAAGTATGCACAGT+GGG | 0.558600 | 5.4:-4143285 | MS.gene22321:CDS |
| CACCTGAAAATTGCTATGCA+TGG | 0.558764 | 5.4:-4139369 | MS.gene22321:CDS |
| AACGAGATTGAACGAGCGAG+AGG | 0.562152 | 5.4:-4142948 | MS.gene22321:CDS |
| GTGCGGTTACTCTCTTGCCG+CGG | 0.562369 | 5.4:-4143115 | MS.gene22321:CDS |
| GCAAATTCTTCGTGAAGCTA+GGG | 0.562667 | 5.4:-4143438 | MS.gene22321:CDS |
| CAACTTGGAGGCTTCATCTG+GGG | 0.564192 | 5.4:-4138674 | MS.gene22321:CDS |
| TTCTTAACCCTAGTTGGACG+TGG | 0.565614 | 5.4:+4143494 | None:intergenic |
| CGTTTGCGGAGTTTGAGGAA+AGG | 0.569334 | 5.4:-4142764 | MS.gene22321:CDS |
| CTGTGATTTGAATTGGAGCG+GGG | 0.569424 | 5.4:+4143465 | None:intergenic |
| AGAACTCGATGCTGGAGACA+TGG | 0.569993 | 5.4:-4142282 | MS.gene22321:CDS |
| ATACGTCAGCTGAATCTCAC+GGG | 0.570788 | 5.4:-4139622 | MS.gene22321:CDS |
| ACATACTTCTCGCACGCTGA+AGG | 0.571646 | 5.4:+4138888 | None:intergenic |
| TATTCCGAAGGGGAGGGCTG+AGG | 0.571654 | 5.4:-4142691 | MS.gene22321:CDS |
| TTCAGTATGAAGATGAAGTG+AGG | 0.574668 | 5.4:-4142584 | MS.gene22321:CDS |
| GAGATGGATGAAATGGATGC+CGG | 0.575668 | 5.4:-4143015 | MS.gene22321:CDS |
| ACGAGATTGAACGAGCGAGA+GGG | 0.576648 | 5.4:-4142947 | MS.gene22321:CDS |
| GGATGCCGGATCAGCAAGGA+TGG | 0.580624 | 5.4:-4143001 | MS.gene22321:CDS |
| GCACTTGATCATATTCCGAA+GGG | 0.581118 | 5.4:-4142702 | MS.gene22321:CDS |
| AACTCGGCGAGTATCGTCTC+CGG | 0.581315 | 5.4:-4143361 | MS.gene22321:CDS |
| CGTATCCAAGCACCAACCCT+AGG | 0.581983 | 5.4:+4142897 | None:intergenic |
| TGGACGTGGAAGCTTGACTT+CGG | 0.584194 | 5.4:+4143508 | None:intergenic |
| TGCATCTTTGGAAGAAGACA+TGG | 0.584680 | 5.4:+4143565 | None:intergenic |
| TGCTCTATCAAATTCACACT+CGG | 0.591262 | 5.4:+4139039 | None:intergenic |
| GGAGAAGCTAGCGGATGATG+AGG | 0.592283 | 5.4:-4142808 | MS.gene22321:CDS |
| ATTAGGGAATGCTATTGGAA+AGG | 0.592842 | 5.4:-4139587 | MS.gene22321:CDS |
| TGCCGCGGGTGGATCAGTTG+TGG | 0.601214 | 5.4:-4143100 | MS.gene22321:CDS |
| TGATCATATTCCGAAGGGGA+GGG | 0.601416 | 5.4:-4142697 | MS.gene22321:CDS |
| TGTACCTTCCACAACAACTC+AGG | 0.605321 | 5.4:+4139253 | None:intergenic |
| GGTTACTCTCTTGCCGCGGG+TGG | 0.606774 | 5.4:-4143111 | MS.gene22321:CDS |
| ATTTAATCCGGAGAGTTCGG+TGG | 0.620567 | 5.4:-4143319 | MS.gene22321:CDS |
| GTATAAGTATATTCATATGG+AGG | 0.621913 | 5.4:-4143078 | MS.gene22321:CDS |
| CACTTGATCATATTCCGAAG+GGG | 0.622291 | 5.4:-4142701 | MS.gene22321:CDS |
| CTGGAGCTGATGATCTGAAG+TGG | 0.624411 | 5.4:+4138737 | None:intergenic |
| AAAGATGCAGACCCAACACT+AGG | 0.624576 | 5.4:-4143551 | MS.gene22321:CDS |
| ATAAGTTTATTAATCATGCG+AGG | 0.627758 | 5.4:-4143151 | MS.gene22321:CDS |
| AATACGTCAGCTGAATCTCA+CGG | 0.630113 | 5.4:-4139623 | MS.gene22321:CDS |
| ATAGAGATAGAACTGCAGCT+TGG | 0.631167 | 5.4:-4139439 | MS.gene22321:CDS |
| TTGATCATATTCCGAAGGGG+AGG | 0.638933 | 5.4:-4142698 | MS.gene22321:CDS |
| GGAGGGCTGAGGATTTGTAC+CGG | 0.641247 | 5.4:-4142680 | MS.gene22321:CDS |
| AACCACGAATCATAATTCAA+CGG | 0.642901 | 5.4:+4142555 | None:intergenic |
| GCAAATGAGAACTTCTGGTG+AGG | 0.644406 | 5.4:+4139676 | None:intergenic |
| GTTTGAGGAAAGGTGTAAGG+AGG | 0.647717 | 5.4:-4142754 | MS.gene22321:CDS |
| ATGGCGAGGTTCCTAAGGCG+AGG | 0.653917 | 5.4:-4142851 | MS.gene22321:CDS |
| TATATGAAAAGTATTTGGAG+TGG | 0.655469 | 5.4:-4139393 | MS.gene22321:CDS |
| ATTATAAGAATCATACTCTG+TGG | 0.659123 | 5.4:-4143202 | MS.gene22321:CDS |
| TGTGATTTGAATTGGAGCGG+GGG | 0.661037 | 5.4:+4143466 | None:intergenic |
| AAATGGATGCCGGATCAGCA+AGG | 0.663884 | 5.4:-4143005 | MS.gene22321:CDS |
| GTTTGAGATGAAGAATGGCG+AGG | 0.666538 | 5.4:-4142865 | MS.gene22321:CDS |
| ACAGTGGGAAGAGTCGCAGA+AGG | 0.666855 | 5.4:-4143270 | MS.gene22321:CDS |
| CATGCCTGAGTTGTTGTGGA+AGG | 0.673647 | 5.4:-4139257 | MS.gene22321:intron |
| GAATGTTTATGAGAGAGCGG+TGG | 0.675482 | 5.4:-4142829 | MS.gene22321:CDS |
| GAGGAATGTTTGGGATCGTG+CGG | 0.677707 | 5.4:-4143132 | MS.gene22321:CDS |
| TACCACAACTGATCCACCCG+CGG | 0.678557 | 5.4:+4143098 | None:intergenic |
| GATGCTTGGCAATGTCGCTG+GGG | 0.678951 | 5.4:-4143054 | MS.gene22321:CDS |
| GAGGAATGTTTATGAGAGAG+CGG | 0.686113 | 5.4:-4142832 | MS.gene22321:CDS |
| GAGAGCGGTGGAGAAGCTAG+CGG | 0.689654 | 5.4:-4142817 | MS.gene22321:CDS |
| TGGTTGAATGTGTTTCCTCG+GGG | 0.698716 | 5.4:+4138324 | None:intergenic |
| CGCTCCAATTCAAATCACAG+CGG | 0.734163 | 5.4:-4143462 | MS.gene22321:CDS |
| TATCGACTATCTATTCCCCG+AGG | 0.735748 | 5.4:-4138339 | MS.gene22321:CDS |
| TTTGGATTAAGTATGCACAG+TGG | 0.776258 | 5.4:-4143286 | MS.gene22321:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTGTTAATATATAAC+AGG | - | chr5.4:4142739-4142758 | MS.gene22321:CDS | 10.0% |
| !! | TTAATAGTTGAAATAAAAAT+AGG | + | chr5.4:4140857-4140876 | None:intergenic | 10.0% |
| !! | TACATATTAATAATGACTAT+AGG | - | chr5.4:4139958-4139977 | MS.gene22321:intron | 15.0% |
| !! | TTTATTAACAAATTTAACAC+AGG | + | chr5.4:4143391-4143410 | None:intergenic | 15.0% |
| !!! | AAAACTATATGAAAAGTATT+TGG | - | chr5.4:4142424-4142443 | MS.gene22321:intron | 15.0% |
| !!! | ATATTAACAATTTTACAGTT+AGG | + | chr5.4:4142734-4142753 | None:intergenic | 15.0% |
| !!! | GATTTTTTATTTTGAAAACT+TGG | + | chr5.4:4141679-4141698 | None:intergenic | 15.0% |
| !!! | TCATTTTGAAACAAATTTTT+TGG | + | chr5.4:4141332-4141351 | None:intergenic | 15.0% |
| !!! | TTTTCTTGAATTGATAAATT+GGG | - | chr5.4:4141011-4141030 | MS.gene22321:intron | 15.0% |
| !! | AAATTAATTACTAACATGAG+TGG | + | chr5.4:4141600-4141619 | None:intergenic | 20.0% |
| !! | AAATTTATTACTAACATGTG+TGG | + | chr5.4:4141256-4141275 | None:intergenic | 20.0% |
| !! | AGAGATTTAAATAAAATGCT+TGG | + | chr5.4:4139610-4139629 | None:intergenic | 20.0% |
| !! | ATAATTCAAACATAAAGTCA+AGG | + | chr5.4:4140782-4140801 | None:intergenic | 20.0% |
| !! | CCTAAATTTGATTGATTAAA+GGG | + | chr5.4:4140352-4140371 | None:intergenic | 20.0% |
| !! | GCATGAATTATTAATTCAAT+CGG | + | chr5.4:4140499-4140518 | None:intergenic | 20.0% |
| !! | GTAAGAAATTAAAGTTGTAT+TGG | + | chr5.4:4141371-4141390 | None:intergenic | 20.0% |
| !! | GTTGAAATAAAAATAGGAAT+CGG | + | chr5.4:4140851-4140870 | None:intergenic | 20.0% |
| !! | TCCTAAATTTGATTGATTAA+AGG | + | chr5.4:4140353-4140372 | None:intergenic | 20.0% |
| !! | TTATAGTGTAGATAAAATAG+TGG | - | chr5.4:4140593-4140612 | MS.gene22321:intron | 20.0% |
| !! | TTGAATTAATAATTCATGCT+CGG | - | chr5.4:4140500-4140519 | MS.gene22321:intron | 20.0% |
| !!! | AAAGTCAAGGTTTTAAATTT+TGG | + | chr5.4:4140769-4140788 | None:intergenic | 20.0% |
| !!! | ATTGTAAGCATATTTTTTAC+GGG | - | chr5.4:4139673-4139692 | MS.gene22321:CDS | 20.0% |
| !!! | CATTGTAAGCATATTTTTTA+CGG | - | chr5.4:4139672-4139691 | MS.gene22321:CDS | 20.0% |
| !!! | GTCTTTTTCTTATAAAGTAA+GGG | - | chr5.4:4141460-4141479 | MS.gene22321:intron | 20.0% |
| !!! | GTTTTCTTGAATTGATAAAT+TGG | - | chr5.4:4141010-4141029 | MS.gene22321:intron | 20.0% |
| !!! | TAATTAAACCATTCTAAAAG+AGG | + | chr5.4:4139918-4139937 | None:intergenic | 20.0% |
| !!! | TATTTAAATCTCTGTTTTGT+TGG | - | chr5.4:4139617-4139636 | MS.gene22321:CDS | 20.0% |
| !!! | TATTTTCCTAGATAATGAAA+TGG | - | chr5.4:4141134-4141153 | MS.gene22321:intron | 20.0% |
| !!! | TGTCTTTTTCTTATAAAGTA+AGG | - | chr5.4:4141459-4141478 | MS.gene22321:intron | 20.0% |
| ! | AAAAAATATGCTTACAATGC+AGG | + | chr5.4:4139671-4139690 | None:intergenic | 25.0% |
| ! | ACACTACTTTCATTTCTTTA+GGG | - | chr5.4:4142106-4142125 | MS.gene22321:intron | 25.0% |
| ! | ATAAGTTTATTAATCATGCG+AGG | - | chr5.4:4138671-4138690 | MS.gene22321:CDS | 25.0% |
| ! | ATTATAAGAATCATACTCTG+TGG | - | chr5.4:4138620-4138639 | MS.gene22321:CDS | 25.0% |
| ! | ATTATAGAAAAAACCAACAC+CGG | + | chr5.4:4140450-4140469 | None:intergenic | 25.0% |
| ! | CCCTTTAATCAATCAAATTT+AGG | - | chr5.4:4140349-4140368 | MS.gene22321:intron | 25.0% |
| ! | CGAGTTAATTTAGTAAAAGA+TGG | + | chr5.4:4142039-4142058 | None:intergenic | 25.0% |
| ! | GTATAAGTATATTCATATGG+AGG | - | chr5.4:4138744-4138763 | MS.gene22321:CDS | 25.0% |
| ! | GTGGTATAAGTATATTCATA+TGG | - | chr5.4:4138741-4138760 | MS.gene22321:CDS | 25.0% |
| ! | GTGGTTTGATTATATAAGAT+TGG | - | chr5.4:4139284-4139303 | MS.gene22321:CDS | 25.0% |
| ! | TAGTATGTTACCTTATCTTT+AGG | + | chr5.4:4142263-4142282 | None:intergenic | 25.0% |
| ! | TATCTGTTGACAAAGATAAA+AGG | + | chr5.4:4142351-4142370 | None:intergenic | 25.0% |
| ! | TATTTGTCTGTGTATAACTT+AGG | - | chr5.4:4139497-4139516 | MS.gene22321:intron | 25.0% |
| ! | TCCAGATTTAAAAGAAGAAA+GGG | - | chr5.4:4143103-4143122 | MS.gene22321:CDS | 25.0% |
| !! | AAATTTAGGAGTGTGTATAT+AGG | - | chr5.4:4140363-4140382 | MS.gene22321:intron | 25.0% |
| !! | AGATGAGAGTTTAGAATTAT+CGG | - | chr5.4:4142889-4142908 | MS.gene22321:CDS | 25.0% |
| !! | ATCAAAAGCACAACAAAAAT+AGG | + | chr5.4:4140306-4140325 | None:intergenic | 25.0% |
| !! | TCGTCTTAATATTTTACTAG+AGG | + | chr5.4:4140810-4140829 | None:intergenic | 25.0% |
| !! | TGAGATATTGACATCTATTT+TGG | + | chr5.4:4142651-4142670 | None:intergenic | 25.0% |
| !! | TTTTTCTTATAAAGTAAGGG+CGG | - | chr5.4:4141463-4141482 | MS.gene22321:intron | 25.0% |
| !!! | AAATAGTGGTTTTTTATGTG+AGG | - | chr5.4:4140607-4140626 | MS.gene22321:intron | 25.0% |
| !!! | AATCATAGGGTCTATTTTTA+TGG | + | chr5.4:4140947-4140966 | None:intergenic | 25.0% |
| !!! | ACACAGTATCTGTTTTTTAT+TGG | - | chr5.4:4140678-4140697 | MS.gene22321:intron | 25.0% |
| !!! | ATTGATTTTGCATTTTCTTG+TGG | - | chr5.4:4139467-4139486 | MS.gene22321:intron | 25.0% |
| !!! | GTTTTTTCTATAATTGCTTC+TGG | - | chr5.4:4140456-4140475 | MS.gene22321:intron | 25.0% |
| !!! | TAAAATAGCCTCTTTTAGAA+TGG | - | chr5.4:4139907-4139926 | MS.gene22321:intron | 25.0% |
| !!! | TATATGAAAAGTATTTGGAG+TGG | - | chr5.4:4142429-4142448 | MS.gene22321:intron | 25.0% |
| !!! | TTGAAACTTTATGGTTTTGA+TGG | - | chr5.4:4141069-4141088 | MS.gene22321:intron | 25.0% |
| !!! | TTGTAAGCATATTTTTTACG+GGG | - | chr5.4:4139674-4139693 | MS.gene22321:CDS | 25.0% |
| !!! | TTTTGTTGTGCTTTTGATAT+TGG | - | chr5.4:4140308-4140327 | MS.gene22321:intron | 25.0% |
| !!! | TTTTTGGGAAAACAATCATA+GGG | + | chr5.4:4140960-4140979 | None:intergenic | 25.0% |
| !!! | TTTTTTGGGAAAACAATCAT+AGG | + | chr5.4:4140961-4140980 | None:intergenic | 25.0% |
| AACCACGAATCATAATTCAA+CGG | + | chr5.4:4139270-4139289 | None:intergenic | 30.0% | |
| AACTAACTAACTACTACTTG+AGG | + | chr5.4:4140716-4140735 | None:intergenic | 30.0% | |
| AAGTAGTGTCAATACTTAGT+AGG | + | chr5.4:4142095-4142114 | None:intergenic | 30.0% | |
| ACTAACTAACTACTACTTGA+GGG | + | chr5.4:4140715-4140734 | None:intergenic | 30.0% | |
| ACTTGATTGTTAGCAATTCT+TGG | - | chr5.4:4140022-4140041 | MS.gene22321:intron | 30.0% | |
| AGATGTTTCATAGATATGGT+AGG | + | chr5.4:4142694-4142713 | None:intergenic | 30.0% | |
| AGGTTAAACTAGAAAGTCAA+TGG | + | chr5.4:4141996-4142015 | None:intergenic | 30.0% | |
| AGTAGTTAGTTAGTTAGGTA+AGG | - | chr5.4:4140721-4140740 | MS.gene22321:intron | 30.0% | |
| AGTTCTCATTTGCAAAGATA+TGG | - | chr5.4:4142156-4142175 | MS.gene22321:intron | 30.0% | |
| ATTATCGGAACAAGAACAAA+AGG | - | chr5.4:4142904-4142923 | MS.gene22321:CDS | 30.0% | |
| CAAATATTAGGGAATGCTAT+TGG | - | chr5.4:4142230-4142249 | MS.gene22321:intron | 30.0% | |
| CAAATTGAGAAGAATGAAGT+AGG | + | chr5.4:4143442-4143461 | None:intergenic | 30.0% | |
| CAAGTAGTAGTTAGTTAGTT+AGG | - | chr5.4:4140716-4140735 | MS.gene22321:intron | 30.0% | |
| CAGTTTGATAGATAGAATAG+TGG | - | chr5.4:4141705-4141724 | MS.gene22321:intron | 30.0% | |
| CTCCAGATTTAAAAGAAGAA+AGG | - | chr5.4:4143102-4143121 | MS.gene22321:CDS | 30.0% | |
| GAATCGGAGAATGAATAATA+GGG | + | chr5.4:4140835-4140854 | None:intergenic | 30.0% | |
| GACACTACTTTCATTTCTTT+AGG | - | chr5.4:4142105-4142124 | MS.gene22321:intron | 30.0% | |
| GCATAGATGTTTCATAGATA+TGG | + | chr5.4:4142698-4142717 | None:intergenic | 30.0% | |
| GGATAGTGCATATTAAGATT+AGG | - | chr5.4:4141726-4141745 | MS.gene22321:intron | 30.0% | |
| GTAAAAACCACTATATACAC+TGG | + | chr5.4:4140647-4140666 | None:intergenic | 30.0% | |
| GTATTTATTGAGGGTAAAGT+TGG | + | chr5.4:4141396-4141415 | None:intergenic | 30.0% | |
| TAATAATGACTATAGGTACC+TGG | - | chr5.4:4139965-4139984 | MS.gene22321:intron | 30.0% | |
| TAGTGCATATTAAGATTAGG+AGG | - | chr5.4:4141729-4141748 | MS.gene22321:intron | 30.0% | |
| TATTAAGATTAGGAGGAGAT+TGG | - | chr5.4:4141736-4141755 | MS.gene22321:intron | 30.0% | |
| TCAAGAAAACCAATGTACTA+TGG | + | chr5.4:4141000-4141019 | None:intergenic | 30.0% | |
| TGAAAGATGTCAAATAGAGT+AGG | - | chr5.4:4140421-4140440 | MS.gene22321:intron | 30.0% | |
| TGGTAAGATACATTTCTTGT+GGG | - | chr5.4:4140897-4140916 | MS.gene22321:intron | 30.0% | |
| TTGAATTGATAAATTGGGCT+TGG | - | chr5.4:4141016-4141035 | MS.gene22321:intron | 30.0% | |
| TTGGCAAACAGATTAAGAAA+TGG | + | chr5.4:4141525-4141544 | None:intergenic | 30.0% | |
| ! | ATTAGACTAGCAAGATTTTC+AGG | + | chr5.4:4139707-4139726 | None:intergenic | 30.0% |
| ! | GTTTTCCCAAAAAACATAAG+TGG | - | chr5.4:4140967-4140986 | MS.gene22321:intron | 30.0% |
| ! | TTTTATACCAATGAGGTTGT+GGG | - | chr5.4:4139759-4139778 | MS.gene22321:intron | 30.0% |
| ! | TTTTTATACCAATGAGGTTG+TGG | - | chr5.4:4139758-4139777 | MS.gene22321:intron | 30.0% |
| !! | AAGAGCTTTATGATCTTTTC+TGG | - | chr5.4:4139863-4139882 | MS.gene22321:intron | 30.0% |
| !! | AAGTGACACTCATTTTGAAA+CGG | + | chr5.4:4141306-4141325 | None:intergenic | 30.0% |
| !! | AAGTTGGGAGTATTTATTGA+GGG | + | chr5.4:4141405-4141424 | None:intergenic | 30.0% |
| !! | AGAGCTTTATGATCTTTTCT+GGG | - | chr5.4:4139864-4139883 | MS.gene22321:intron | 30.0% |
| !! | CTCAATTTGATTTTGCAGAA+TGG | - | chr5.4:4143453-4143472 | MS.gene22321:CDS | 30.0% |
| !! | GGGATTGATTTGAAACTTTA+TGG | - | chr5.4:4141060-4141079 | MS.gene22321:intron | 30.0% |
| !!! | ATTTGTTTTGTGTCATCCTA+GGG | - | chr5.4:4138909-4138928 | MS.gene22321:CDS | 30.0% |
| !!! | CTGTTTTTTTTTACCTTTCC+TGG | - | chr5.4:4141868-4141887 | MS.gene22321:intron | 30.0% |
| !!! | CTTTCTAGTTTAACCTTTTC+TGG | - | chr5.4:4142000-4142019 | MS.gene22321:intron | 30.0% |
| !!! | TACTGGTTTTGAGAATAAGA+AGG | - | chr5.4:4141092-4141111 | MS.gene22321:intron | 30.0% |
| AAACGACACTCATTGTGAAA+CGG | - | chr5.4:4141551-4141570 | MS.gene22321:intron | 35.0% | |
| AAATTGTGTGAGAGAGAAGT+TGG | + | chr5.4:4141421-4141440 | None:intergenic | 35.0% | |
| AATGCTTGGAAGTTCACAAA+AGG | + | chr5.4:4139596-4139615 | None:intergenic | 35.0% | |
| AATTGTGTGAGAGAGAAGTT+GGG | + | chr5.4:4141420-4141439 | None:intergenic | 35.0% | |
| ACTCATTGTTTGTCTTTGAG+TGG | - | chr5.4:4143270-4143289 | MS.gene22321:CDS | 35.0% | |
| AGACAAGTTTCTACTGAAGA+TGG | - | chr5.4:4143227-4143246 | MS.gene22321:CDS | 35.0% | |
| AGGAATTCGAGGATTTAATC+CGG | - | chr5.4:4138491-4138510 | MS.gene22321:intron | 35.0% | |
| AGGCATATGTGAAGTTAACT+AGG | + | chr5.4:4142331-4142350 | None:intergenic | 35.0% | |
| AGGCTATATAAACTAACCCT+TGG | + | chr5.4:4143299-4143318 | None:intergenic | 35.0% | |
| ATATGGTAGGAAACTAGTAG+AGG | + | chr5.4:4142681-4142700 | None:intergenic | 35.0% | |
| ATCCGTTGAATTATGATTCG+TGG | - | chr5.4:4139265-4139284 | MS.gene22321:CDS | 35.0% | |
| ATTAGAGAAATGGCTCAACT+TGG | - | chr5.4:4143133-4143152 | MS.gene22321:CDS | 35.0% | |
| ATTAGGGAATGCTATTGGAA+AGG | - | chr5.4:4142235-4142254 | MS.gene22321:intron | 35.0% | |
| ATTGGTTGAATGTGTTTCCT+CGG | + | chr5.4:4143503-4143522 | None:intergenic | 35.0% | |
| CAGAAGAAAAAGATGTGTAG+TGG | - | chr5.4:4140565-4140584 | MS.gene22321:intron | 35.0% | |
| CAGTAAACCAGTGTATATAG+TGG | - | chr5.4:4140637-4140656 | MS.gene22321:intron | 35.0% | |
| CAGTGACAAAATTGCAAACA+AGG | + | chr5.4:4143319-4143338 | None:intergenic | 35.0% | |
| CATATTCTCTAACATCAACC+AGG | + | chr5.4:4139986-4140005 | None:intergenic | 35.0% | |
| CCTAGATAATGAAATGGTGA+AGG | - | chr5.4:4141140-4141159 | MS.gene22321:intron | 35.0% | |
| CCTTCACCATTTCATTATCT+AGG | + | chr5.4:4141143-4141162 | None:intergenic | 35.0% | |
| GGAATCGGAGAATGAATAAT+AGG | + | chr5.4:4140836-4140855 | None:intergenic | 35.0% | |
| GTAAAAGATGGCAATAGAGA+TGG | + | chr5.4:4142027-4142046 | None:intergenic | 35.0% | |
| GTCAATCTCTGAATCAAATG+TGG | + | chr5.4:4141845-4141864 | None:intergenic | 35.0% | |
| GTGGTAAGATACATTTCTTG+TGG | - | chr5.4:4140896-4140915 | MS.gene22321:intron | 35.0% | |
| TAATCATGCGAGGAATGTTT+GGG | - | chr5.4:4138681-4138700 | MS.gene22321:CDS | 35.0% | |
| TATGAAACATCTATGCATGC+TGG | - | chr5.4:4142702-4142721 | MS.gene22321:CDS | 35.0% | |
| TCCCAAAAAACATAAGTGGT+GGG | - | chr5.4:4140971-4140990 | MS.gene22321:intron | 35.0% | |
| TCTTTGCAAATGAGAACTTC+TGG | + | chr5.4:4142154-4142173 | None:intergenic | 35.0% | |
| TGAGAAACAGTATGGTGATA+GGG | - | chr5.4:4139179-4139198 | MS.gene22321:intron | 35.0% | |
| TGCTCTATCAAATTCACACT+CGG | + | chr5.4:4142786-4142805 | None:intergenic | 35.0% | |
| TGTATATAGGTTTAGGAGTG+TGG | - | chr5.4:4140376-4140395 | MS.gene22321:intron | 35.0% | |
| TTAATCATGCGAGGAATGTT+TGG | - | chr5.4:4138680-4138699 | MS.gene22321:CDS | 35.0% | |
| TTCAACCAATCTCAAGATCA+TGG | - | chr5.4:4143513-4143532 | MS.gene22321:CDS | 35.0% | |
| TTCAGTATGAAGATGAAGTG+AGG | - | chr5.4:4139238-4139257 | MS.gene22321:intron | 35.0% | |
| TTCCCAAAAAACATAAGTGG+TGG | - | chr5.4:4140970-4140989 | MS.gene22321:intron | 35.0% | |
| TTGAGAAACAGTATGGTGAT+AGG | - | chr5.4:4139178-4139197 | MS.gene22321:intron | 35.0% | |
| TTGATTCATTCACGGTTCTT+AGG | - | chr5.4:4139784-4139803 | MS.gene22321:intron | 35.0% | |
| TTGCTTCTTCCATTTGTAAG+CGG | + | chr5.4:4143542-4143561 | None:intergenic | 35.0% | |
| TTGGATTAAGTATGCACAGT+GGG | - | chr5.4:4138537-4138556 | MS.gene22321:intron | 35.0% | |
| TTTGGATTAAGTATGCACAG+TGG | - | chr5.4:4138536-4138555 | MS.gene22321:intron | 35.0% | |
| TTTGTTGACCATCTATCAAC+AGG | - | chr5.4:4141647-4141666 | MS.gene22321:intron | 35.0% | |
| ! | AGGAGTGTGTATATAGGTTT+AGG | - | chr5.4:4140369-4140388 | MS.gene22321:intron | 35.0% |
| ! | ATAAGATTGGAAGAGAGTGT+CGG | - | chr5.4:4139297-4139316 | MS.gene22321:CDS | 35.0% |
| ! | GAATCGGTGATTTTCTGTTT+CGG | + | chr5.4:4138436-4138455 | None:intergenic | 35.0% |
| ! | GCAAGCTTTTTATACCAATG+AGG | - | chr5.4:4139752-4139771 | MS.gene22321:intron | 35.0% |
| ! | GCCCTTTCTTCTTTTAAATC+TGG | + | chr5.4:4143107-4143126 | None:intergenic | 35.0% |
| ! | TTTCTGGTATCGTTAGCATT+AGG | - | chr5.4:4143343-4143362 | MS.gene22321:CDS | 35.0% |
| ! | TTTGGTGATAGCCTGATATT+TGG | + | chr5.4:4142633-4142652 | None:intergenic | 35.0% |
| !! | ATTTTGTCACTGCTAGTTTC+TGG | - | chr5.4:4143327-4143346 | MS.gene22321:CDS | 35.0% |
| !! | GAAGTTGGGAGTATTTATTG+AGG | + | chr5.4:4141406-4141425 | None:intergenic | 35.0% |
| !! | GTTTTGTTCTTAACCCTAGT+TGG | + | chr5.4:4138337-4138356 | None:intergenic | 35.0% |
| !! | TTCACAATGAGTGTCGTTTA+AGG | + | chr5.4:4141550-4141569 | None:intergenic | 35.0% |
| !! | TTTGAGTTTTGCTGTACTTG+TGG | - | chr5.4:4140279-4140298 | MS.gene22321:intron | 35.0% |
| !! | TTTTCGAGAGATGGATGAAA+TGG | - | chr5.4:4138800-4138819 | MS.gene22321:intron | 35.0% |
| !!! | ATCCCACCACTTATGTTTTT+TGG | + | chr5.4:4140976-4140995 | None:intergenic | 35.0% |
| !!! | ATGAGTGTCGTTTAAGGTTT+TGG | + | chr5.4:4141544-4141563 | None:intergenic | 35.0% |
| !!! | CTTTATGGTTTTGATGGTAC+TGG | - | chr5.4:4141075-4141094 | MS.gene22321:intron | 35.0% |
| !!! | GATTTGTTTTGTGTCATCCT+AGG | - | chr5.4:4138908-4138927 | MS.gene22321:CDS | 35.0% |
| !!! | TCCCACCACTTATGTTTTTT+GGG | + | chr5.4:4140975-4140994 | None:intergenic | 35.0% |
| !!! | TGTGGGTTTTGATTCATTCA+CGG | - | chr5.4:4139776-4139795 | MS.gene22321:intron | 35.0% |
| !!! | TTTGTTTTGTGCCTGTTTAG+AGG | - | chr5.4:4143043-4143062 | MS.gene22321:CDS | 35.0% |
| AAACAGTATGGTGATAGGGA+AGG | - | chr5.4:4139183-4139202 | MS.gene22321:intron | 40.0% | |
| AACAGTATGGTGATAGGGAA+GGG | - | chr5.4:4139184-4139203 | MS.gene22321:intron | 40.0% | |
| AACGACACTCATTGTGAAAC+GGG | - | chr5.4:4141552-4141571 | MS.gene22321:intron | 40.0% | |
| AATACGTCAGCTGAATCTCA+CGG | - | chr5.4:4142199-4142218 | MS.gene22321:intron | 40.0% | |
| AGCAAATTCTTCGTGAAGCT+AGG | - | chr5.4:4138383-4138402 | MS.gene22321:intron | 40.0% | |
| AGCTCTTGCATCAAACAAAG+AGG | + | chr5.4:4139850-4139869 | None:intergenic | 40.0% | |
| AGGATTTAATCCGGAGAGTT+CGG | - | chr5.4:4138500-4138519 | MS.gene22321:intron | 40.0% | |
| AGTGCTAGTGATGTACCTTA+AGG | - | chr5.4:4140124-4140143 | MS.gene22321:intron | 40.0% | |
| ATAGAGATAGAACTGCAGCT+TGG | - | chr5.4:4142383-4142402 | MS.gene22321:intron | 40.0% | |
| ATCAAAACCCACAACCTCAT+TGG | + | chr5.4:4139769-4139788 | None:intergenic | 40.0% | |
| ATCCTCAAACACCTCTAAAC+AGG | + | chr5.4:4143057-4143076 | None:intergenic | 40.0% | |
| ATGCTATTGTTGGGAAGAGA+AGG | - | chr5.4:4139214-4139233 | MS.gene22321:intron | 40.0% | |
| ATTCATATGGAGGAGATGCT+TGG | - | chr5.4:4138754-4138773 | MS.gene22321:CDS | 40.0% | |
| CAAGAGCAAAGAAGTTGTAC+AGG | + | chr5.4:4141813-4141832 | None:intergenic | 40.0% | |
| CAATAGAACTCAACCAGGAA+AGG | + | chr5.4:4141884-4141903 | None:intergenic | 40.0% | |
| CAATAGAGATGGACCAGAAA+AGG | + | chr5.4:4142016-4142035 | None:intergenic | 40.0% | |
| CACCTGAAAATTGCTATGCA+TGG | - | chr5.4:4142453-4142472 | MS.gene22321:intron | 40.0% | |
| CACTTGATCATATTCCGAAG+GGG | - | chr5.4:4139121-4139140 | MS.gene22321:intron | 40.0% | |
| CAGCTGACGTATTTCAAACT+GGG | + | chr5.4:4142192-4142211 | None:intergenic | 40.0% | |
| CATCACTAGCACTTCAACTT+TGG | + | chr5.4:4140117-4140136 | None:intergenic | 40.0% | |
| CATTCTGAGTGCTTGATATG+TGG | - | chr5.4:4141189-4141208 | MS.gene22321:intron | 40.0% | |
| CGGGAATAAGGAAAGAACTA+GGG | - | chr5.4:4139317-4139336 | MS.gene22321:CDS | 40.0% | |
| CTACTGAAGATGGTTCTTCT+AGG | - | chr5.4:4143237-4143256 | MS.gene22321:CDS | 40.0% | |
| CTCTCAGTTTGTGATTCAGT+TGG | - | chr5.4:4140222-4140241 | MS.gene22321:intron | 40.0% | |
| CTGTACAAGAGCCAAATATC+AGG | - | chr5.4:4142619-4142638 | MS.gene22321:CDS | 40.0% | |
| CTTACAATGCAGGAAAAGCA+TGG | + | chr5.4:4139661-4139680 | None:intergenic | 40.0% | |
| CTTCTCTTCTTGAGCTTCTT+GGG | + | chr5.4:4143209-4143228 | None:intergenic | 40.0% | |
| GAATAAGGAAAGAACTAGGG+AGG | - | chr5.4:4139320-4139339 | MS.gene22321:CDS | 40.0% | |
| GAGGAATGTTTATGAGAGAG+CGG | - | chr5.4:4138990-4139009 | MS.gene22321:CDS | 40.0% | |
| GAGTGAGATAACCTAGTGTT+GGG | + | chr5.4:4138285-4138304 | None:intergenic | 40.0% | |
| GCAAATTCTTCGTGAAGCTA+GGG | - | chr5.4:4138384-4138403 | MS.gene22321:intron | 40.0% | |
| GCACTTGATCATATTCCGAA+GGG | - | chr5.4:4139120-4139139 | MS.gene22321:intron | 40.0% | |
| GGATTGAGGATGCTATTGTT+GGG | - | chr5.4:4139205-4139224 | MS.gene22321:intron | 40.0% | |
| GGCAGCGCTATATTTATTTG+TGG | - | chr5.4:4139394-4139413 | MS.gene22321:CDS | 40.0% | |
| GGGCAATGCTATTAGAGAAA+TGG | - | chr5.4:4143123-4143142 | MS.gene22321:CDS | 40.0% | |
| GTGGCATTTGAGAAACAGTA+TGG | - | chr5.4:4139171-4139190 | MS.gene22321:intron | 40.0% | |
| GTTAAGATAGATGCTCAACG+TGG | - | chr5.4:4140877-4140896 | MS.gene22321:intron | 40.0% | |
| GTTGAGTTCTATTGCCATCA+CGG | - | chr5.4:4141890-4141909 | MS.gene22321:intron | 40.0% | |
| TATAGCTTGAATACCCGTGA+TGG | + | chr5.4:4141907-4141926 | None:intergenic | 40.0% | |
| TCAGCTGACGTATTTCAAAC+TGG | + | chr5.4:4142193-4142212 | None:intergenic | 40.0% | |
| TCATAAACATTCCTCGCCTT+AGG | + | chr5.4:4138985-4139004 | None:intergenic | 40.0% | |
| TCGGGAATAAGGAAAGAACT+AGG | - | chr5.4:4139316-4139335 | MS.gene22321:CDS | 40.0% | |
| TCTCAAATGCCACAAACTTC+CGG | + | chr5.4:4139164-4139183 | None:intergenic | 40.0% | |
| TCTTCTCTTCTTGAGCTTCT+TGG | + | chr5.4:4143210-4143229 | None:intergenic | 40.0% | |
| TCTTGCATCAAACAAAGAGG+AGG | + | chr5.4:4139847-4139866 | None:intergenic | 40.0% | |
| TGCACTTGATCATATTCCGA+AGG | - | chr5.4:4139119-4139138 | MS.gene22321:intron | 40.0% | |
| TGGAAAGGCTCCTAAAGATA+AGG | - | chr5.4:4142250-4142269 | MS.gene22321:intron | 40.0% | |
| TGTAAGAACGCTAGACCTTA+AGG | + | chr5.4:4140142-4140161 | None:intergenic | 40.0% | |
| TGTCAAATAGAGTAGGAGAC+CGG | - | chr5.4:4140428-4140447 | MS.gene22321:intron | 40.0% | |
| TGTCTTTGAGTGGTTTCCAA+GGG | - | chr5.4:4143280-4143299 | MS.gene22321:CDS | 40.0% | |
| TTGAGTTCTATTGCCATCAC+GGG | - | chr5.4:4141891-4141910 | MS.gene22321:intron | 40.0% | |
| TTGGTTGAATGTGTTTCCTC+GGG | + | chr5.4:4143502-4143521 | None:intergenic | 40.0% | |
| TTGTCTTTGAGTGGTTTCCA+AGG | - | chr5.4:4143279-4143298 | MS.gene22321:CDS | 40.0% | |
| ! | CCTCGAATTCCTTTCTTTTC+CGG | + | chr5.4:4138483-4138502 | None:intergenic | 40.0% |
| ! | CTCCATGCATAGCAATTTTC+AGG | + | chr5.4:4142458-4142477 | None:intergenic | 40.0% |
| ! | GAACAAAGCACTTGAAGGTA+TGG | - | chr5.4:4142834-4142853 | MS.gene22321:CDS | 40.0% |
| ! | GCGAAGTTTGAGATGAAGAA+TGG | - | chr5.4:4138952-4138971 | MS.gene22321:CDS | 40.0% |
| ! | GGTATCAACCTGTTGATAGA+TGG | + | chr5.4:4141658-4141677 | None:intergenic | 40.0% |
| ! | TGATCGAACAAAGCACTTGA+AGG | - | chr5.4:4142829-4142848 | MS.gene22321:CDS | 40.0% |
| ! | TGATTTTCTGTTTCGGAGGA+CGG | + | chr5.4:4138429-4138448 | None:intergenic | 40.0% |
| !! | AAATTGGGCTTGGTTTGCAT+TGG | - | chr5.4:4141026-4141045 | MS.gene22321:intron | 40.0% |
| !! | TAAGATTGGAAGAGAGTGTC+GGG | - | chr5.4:4139298-4139317 | MS.gene22321:CDS | 40.0% |
| !!! | AGAGGTTTTAGACTTGGACT+AGG | - | chr5.4:4141759-4141778 | MS.gene22321:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr5.4:4141302-4141321 | None:intergenic | 40.0% |
| !!! | GATTGGAGAGGTTTTAGACT+TGG | - | chr5.4:4141753-4141772 | MS.gene22321:intron | 40.0% |
| !!! | GGATACTGTTTTTAGAGCAG+TGG | - | chr5.4:4139810-4139829 | MS.gene22321:intron | 40.0% |
| !!! | TGACACTCATTTTGAAACGG+AGG | + | chr5.4:4141303-4141322 | None:intergenic | 40.0% |
| AAAGATGCAGACCCAACACT+AGG | - | chr5.4:4138271-4138290 | MS.gene22321:CDS | 45.0% | |
| ACGACACTCATTGTGAAACG+GGG | - | chr5.4:4141553-4141572 | MS.gene22321:intron | 45.0% | |
| ACGGGTGCTCGTCAAATATT+AGG | - | chr5.4:4142218-4142237 | MS.gene22321:intron | 45.0% | |
| AGAGAAATGGCTCAACTTGG+AGG | - | chr5.4:4143136-4143155 | MS.gene22321:CDS | 45.0% | |
| AGATTAGGAGGAGATTGGAG+AGG | - | chr5.4:4141741-4141760 | MS.gene22321:intron | 45.0% | |
| ATACGTCAGCTGAATCTCAC+GGG | - | chr5.4:4142200-4142219 | MS.gene22321:intron | 45.0% | |
| ATTTAATCCGGAGAGTTCGG+TGG | - | chr5.4:4138503-4138522 | MS.gene22321:intron | 45.0% | |
| CCGGAAAAGAAAGGAATTCG+AGG | - | chr5.4:4138480-4138499 | MS.gene22321:intron | 45.0% | |
| CGAGTGAGATAACCTAGTGT+TGG | + | chr5.4:4138286-4138305 | None:intergenic | 45.0% | |
| CGCTCCAATTCAAATCACAG+CGG | - | chr5.4:4138360-4138379 | MS.gene22321:intron | 45.0% | |
| CGCTGTGATTTGAATTGGAG+CGG | + | chr5.4:4138362-4138381 | None:intergenic | 45.0% | |
| CGGGTGCTCGTCAAATATTA+GGG | - | chr5.4:4142219-4142238 | MS.gene22321:intron | 45.0% | |
| CTCTATGAAGAACTCGATGC+TGG | - | chr5.4:4139532-4139551 | MS.gene22321:intron | 45.0% | |
| CTGTGATTTGAATTGGAGCG+GGG | + | chr5.4:4138360-4138379 | None:intergenic | 45.0% | |
| GAATGTTTATGAGAGAGCGG+TGG | - | chr5.4:4138993-4139012 | MS.gene22321:CDS | 45.0% | |
| GAGATGGATGAAATGGATGC+CGG | - | chr5.4:4138807-4138826 | MS.gene22321:intron | 45.0% | |
| GATAACCATCCTTGCTGATC+CGG | + | chr5.4:4138829-4138848 | None:intergenic | 45.0% | |
| GATGGCAATAGAACTCAACC+AGG | + | chr5.4:4141889-4141908 | None:intergenic | 45.0% | |
| GCAAATGAGAACTTCTGGTG+AGG | + | chr5.4:4142149-4142168 | None:intergenic | 45.0% | |
| GCTGTGATTTGAATTGGAGC+GGG | + | chr5.4:4138361-4138380 | None:intergenic | 45.0% | |
| GGATTTGTACCGGAAGTTTG+TGG | - | chr5.4:4139152-4139171 | MS.gene22321:intron | 45.0% | |
| GGCTTCCATGATCTTGAGAT+TGG | + | chr5.4:4143521-4143540 | None:intergenic | 45.0% | |
| GGGATTGAGGATGCTATTGT+TGG | - | chr5.4:4139204-4139223 | MS.gene22321:intron | 45.0% | |
| GGTATCGTTAGCATTAGGCT+TGG | - | chr5.4:4143348-4143367 | MS.gene22321:CDS | 45.0% | |
| GGTGGGATTCCATAGTACAT+TGG | - | chr5.4:4140988-4141007 | MS.gene22321:intron | 45.0% | |
| GTAAGGCTCTCAACTTAGAG+TGG | - | chr5.4:4140738-4140757 | MS.gene22321:intron | 45.0% | |
| GTATCGTCTCCGGAAAAGAA+AGG | - | chr5.4:4138471-4138490 | MS.gene22321:intron | 45.0% | |
| TCAACTTGGAGGCTTCATCT+GGG | - | chr5.4:4143147-4143166 | MS.gene22321:CDS | 45.0% | |
| TCATGGAAGCCGCTTACAAA+TGG | - | chr5.4:4143530-4143549 | MS.gene22321:CDS | 45.0% | |
| TCATTCACGGTTCTTAGGCT+GGG | - | chr5.4:4139789-4139808 | MS.gene22321:intron | 45.0% | |
| TGATCATATTCCGAAGGGGA+GGG | - | chr5.4:4139125-4139144 | MS.gene22321:intron | 45.0% | |
| TGCTCCGCTGTGATTTGAAT+TGG | + | chr5.4:4138367-4138386 | None:intergenic | 45.0% | |
| TGGTTGAATGTGTTTCCTCG+GGG | + | chr5.4:4143501-4143520 | None:intergenic | 45.0% | |
| TGTACCTTCCACAACAACTC+AGG | + | chr5.4:4142572-4142591 | None:intergenic | 45.0% | |
| TGTGATTTGAATTGGAGCGG+GGG | + | chr5.4:4138359-4138378 | None:intergenic | 45.0% | |
| TTCATTCACGGTTCTTAGGC+TGG | - | chr5.4:4139788-4139807 | MS.gene22321:intron | 45.0% | |
| TTCGGTGGAATGTCAGTGTT+TGG | - | chr5.4:4138518-4138537 | MS.gene22321:intron | 45.0% | |
| TTCTTAACCCTAGTTGGACG+TGG | + | chr5.4:4138331-4138350 | None:intergenic | 45.0% | |
| TTGATCATATTCCGAAGGGG+AGG | - | chr5.4:4139124-4139143 | MS.gene22321:intron | 45.0% | |
| ! | AGAACTTCTGGTGAGGTATC+TGG | + | chr5.4:4142142-4142161 | None:intergenic | 45.0% |
| ! | AGGTTTAGGAGTGTGGATAC+TGG | - | chr5.4:4140383-4140402 | MS.gene22321:intron | 45.0% |
| ! | GGAGTTTGAGGAAAGGTGTA+AGG | - | chr5.4:4139065-4139084 | MS.gene22321:intron | 45.0% |
| ! | GTTTGAGATGAAGAATGGCG+AGG | - | chr5.4:4138957-4138976 | MS.gene22321:CDS | 45.0% |
| ! | GTTTGAGGAAAGGTGTAAGG+AGG | - | chr5.4:4139068-4139087 | MS.gene22321:intron | 45.0% |
| ! | GTTTTGTGTCATCCTAGGGT+TGG | - | chr5.4:4138913-4138932 | MS.gene22321:CDS | 45.0% |
| ! | TAGTGTTGGGTCTGCATCTT+TGG | + | chr5.4:4138272-4138291 | None:intergenic | 45.0% |
| ! | TATCGACTATCTATTCCCCG+AGG | - | chr5.4:4143483-4143502 | MS.gene22321:CDS | 45.0% |
| ! | TCGGTGATTTTCTGTTTCGG+AGG | + | chr5.4:4138433-4138452 | None:intergenic | 45.0% |
| ! | TGGATACTGGAGTGTTCATG+TGG | - | chr5.4:4140396-4140415 | MS.gene22321:intron | 45.0% |
| !! | ATCACCGATTCAACCGAACT+CGG | - | chr5.4:4138445-4138464 | MS.gene22321:intron | 45.0% |
| !! | GAGCAAGAGCGCTTTATGAA+AGG | - | chr5.4:4142801-4142820 | MS.gene22321:CDS | 45.0% |
| !! | TGCCTGTTTAGAGGTGTTTG+AGG | - | chr5.4:4143052-4143071 | MS.gene22321:CDS | 45.0% |
| AAATGGATGCCGGATCAGCA+AGG | - | chr5.4:4138817-4138836 | MS.gene22321:intron | 50.0% | |
| AACGAGATTGAACGAGCGAG+AGG | - | chr5.4:4138874-4138893 | MS.gene22321:intron | 50.0% | |
| ACATACTTCTCGCACGCTGA+AGG | + | chr5.4:4142937-4142956 | None:intergenic | 50.0% | |
| ACGAGATTGAACGAGCGAGA+GGG | - | chr5.4:4138875-4138894 | MS.gene22321:intron | 50.0% | |
| AGAACTCGATGCTGGAGACA+TGG | - | chr5.4:4139540-4139559 | MS.gene22321:intron | 50.0% | |
| AGATGCTTGGCAATGTCGCT+GGG | - | chr5.4:4138767-4138786 | MS.gene22321:intron | 50.0% | |
| AGCTAATGTTCCTCCAGCTG+AGG | - | chr5.4:4139359-4139378 | MS.gene22321:CDS | 50.0% | |
| ATAGAGTAGGAGACCGGTGT+TGG | - | chr5.4:4140434-4140453 | MS.gene22321:intron | 50.0% | |
| CAACTTGGAGGCTTCATCTG+GGG | - | chr5.4:4143148-4143167 | MS.gene22321:CDS | 50.0% | |
| CAAGCTTCCACGTCCAACTA+GGG | - | chr5.4:4138321-4138340 | MS.gene22321:CDS | 50.0% | |
| CATGCCTGAGTTGTTGTGGA+AGG | - | chr5.4:4142565-4142584 | MS.gene22321:CDS | 50.0% | |
| CGACACTCATTGTGAAACGG+GGG | - | chr5.4:4141554-4141573 | MS.gene22321:intron | 50.0% | |
| CGTTTGCGGAGTTTGAGGAA+AGG | - | chr5.4:4139058-4139077 | MS.gene22321:CDS | 50.0% | |
| CTCAACTTGGAGGCTTCATC+TGG | - | chr5.4:4143146-4143165 | MS.gene22321:CDS | 50.0% | |
| CTGGAGCTGATGATCTGAAG+TGG | + | chr5.4:4143088-4143107 | None:intergenic | 50.0% | |
| GAAGAATGGCGAGGTTCCTA+AGG | - | chr5.4:4138966-4138985 | MS.gene22321:CDS | 50.0% | |
| GACACTCATTGTGAAACGGG+GGG | - | chr5.4:4141555-4141574 | MS.gene22321:intron | 50.0% | |
| GGAGCGAAGTTCTACAGAGA+GGG | + | chr5.4:4141235-4141254 | None:intergenic | 50.0% | |
| GTTCTACAGAGAGGGCAACT+AGG | + | chr5.4:4141227-4141246 | None:intergenic | 50.0% | |
| TCAAGCTTCCACGTCCAACT+AGG | - | chr5.4:4138320-4138339 | MS.gene22321:CDS | 50.0% | |
| TGACATTCCACCGAACTCTC+CGG | + | chr5.4:4138513-4138532 | None:intergenic | 50.0% | |
| TGGACATGCCTGAGTTGTTG+TGG | - | chr5.4:4142561-4142580 | MS.gene22321:CDS | 50.0% | |
| TGGACGTGGAAGCTTGACTT+CGG | + | chr5.4:4138317-4138336 | None:intergenic | 50.0% | |
| TGGAGCGAAGTTCTACAGAG+AGG | + | chr5.4:4141236-4141255 | None:intergenic | 50.0% | |
| TGGTGATAGGGAAGGGATTG+AGG | - | chr5.4:4139191-4139210 | MS.gene22321:intron | 50.0% | |
| ! | GAGGAATGTTTGGGATCGTG+CGG | - | chr5.4:4138690-4138709 | MS.gene22321:CDS | 50.0% |
| ! | GGATTTTACACGTGCGCGTT+CGG | - | chr5.4:4138573-4138592 | MS.gene22321:intron | 50.0% |
| !! | GGAAGAGAGTGTCGGGAATA+AGG | - | chr5.4:4139305-4139324 | MS.gene22321:CDS | 50.0% |
| !! | TTCGGTTTGGGAACGAGCAT+TGG | - | chr5.4:4138591-4138610 | MS.gene22321:CDS | 50.0% |
| !! | TTGCATTGGCTGGGAGCATT+GGG | - | chr5.4:4141040-4141059 | MS.gene22321:intron | 50.0% |
| !! | TTTGCATTGGCTGGGAGCAT+TGG | - | chr5.4:4141039-4141058 | MS.gene22321:intron | 50.0% |
| !!! | GCTGCTTTTTGTGGCGTTTG+CGG | - | chr5.4:4139044-4139063 | MS.gene22321:CDS | 50.0% |
| !!! | GGAAGCAGAGCTGCTTTTTG+TGG | - | chr5.4:4139035-4139054 | MS.gene22321:CDS | 50.0% |
| AAATCCTCAGCCCTCCCCTT+CGG | + | chr5.4:4139138-4139157 | None:intergenic | 55.0% | |
| ACAGTGGGAAGAGTCGCAGA+AGG | - | chr5.4:4138552-4138571 | MS.gene22321:intron | 55.0% | |
| CAGCTGAGGAGAAGCGATAC+TGG | - | chr5.4:4139373-4139392 | MS.gene22321:CDS | 55.0% | |
| CAGTATCGCTTCTCCTCAGC+TGG | + | chr5.4:4139375-4139394 | None:intergenic | 55.0% | |
| CGTATCCAAGCACCAACCCT+AGG | + | chr5.4:4138928-4138947 | None:intergenic | 55.0% | |
| CTCGCCGAGTTCGGTTGAAT+CGG | + | chr5.4:4138452-4138471 | None:intergenic | 55.0% | |
| GAGACGATACTCGCCGAGTT+CGG | + | chr5.4:4138461-4138480 | None:intergenic | 55.0% | |
| GAGATGCTTGGCAATGTCGC+TGG | - | chr5.4:4138766-4138785 | MS.gene22321:intron | 55.0% | |
| GATGCTTGGCAATGTCGCTG+GGG | - | chr5.4:4138768-4138787 | MS.gene22321:intron | 55.0% | |
| GCTTCTTGGGCAGCTTAGAC+TGG | + | chr5.4:4143196-4143215 | None:intergenic | 55.0% | |
| GGAGGGCTGAGGATTTGTAC+CGG | - | chr5.4:4139142-4139161 | MS.gene22321:intron | 55.0% | |
| TACACGTGCGCGTTCGGTTT+GGG | - | chr5.4:4138579-4138598 | MS.gene22321:intron | 55.0% | |
| TACCACAACTGATCCACCCG+CGG | + | chr5.4:4138727-4138746 | None:intergenic | 55.0% | |
| TATCGCTTCTCCTCAGCTGG+AGG | + | chr5.4:4139372-4139391 | None:intergenic | 55.0% | |
| TGTGGCGTTTGCGGAGTTTG+AGG | - | chr5.4:4139053-4139072 | MS.gene22321:CDS | 55.0% | |
| TTACACGTGCGCGTTCGGTT+TGG | - | chr5.4:4138578-4138597 | MS.gene22321:intron | 55.0% | |
| ! | AACTCGGCGAGTATCGTCTC+CGG | - | chr5.4:4138461-4138480 | MS.gene22321:intron | 55.0% |
| ! | GGAGAAGCTAGCGGATGATG+AGG | - | chr5.4:4139014-4139033 | MS.gene22321:CDS | 55.0% |
| !! | CGAGGCAGGTTTTCGAGAGA+TGG | - | chr5.4:4138791-4138810 | MS.gene22321:intron | 55.0% |
| !! | GGGCTTGGTTTGCATTGGCT+GGG | - | chr5.4:4141031-4141050 | MS.gene22321:intron | 55.0% |
| !! | GTCATCCTAGGGTTGGTGCT+TGG | - | chr5.4:4138920-4138939 | MS.gene22321:CDS | 55.0% |
| !! | TGGGCTTGGTTTGCATTGGC+TGG | - | chr5.4:4141030-4141049 | MS.gene22321:intron | 55.0% |
| ATGGCGAGGTTCCTAAGGCG+AGG | - | chr5.4:4138971-4138990 | MS.gene22321:CDS | 60.0% | |
| GAGAGCGGTGGAGAAGCTAG+CGG | - | chr5.4:4139005-4139024 | MS.gene22321:CDS | 60.0% | |
| GAGGCTTCATCTGGGGAGCT+AGG | - | chr5.4:4143155-4143174 | MS.gene22321:CDS | 60.0% | |
| GGATGCCGGATCAGCAAGGA+TGG | - | chr5.4:4138821-4138840 | MS.gene22321:intron | 60.0% | |
| GTAAGGAGGCAGAGCGTGCT+AGG | - | chr5.4:4139082-4139101 | MS.gene22321:intron | 60.0% | |
| GTGCGGTTACTCTCTTGCCG+CGG | - | chr5.4:4138707-4138726 | MS.gene22321:CDS | 60.0% | |
| TATTCCGAAGGGGAGGGCTG+AGG | - | chr5.4:4139131-4139150 | MS.gene22321:intron | 60.0% | |
| TGCGGTTACTCTCTTGCCGC+GGG | - | chr5.4:4138708-4138727 | MS.gene22321:CDS | 60.0% | |
| GGTTACTCTCTTGCCGCGGG+TGG | - | chr5.4:4138711-4138730 | MS.gene22321:CDS | 65.0% | |
| TGCCGCGGGTGGATCAGTTG+TGG | - | chr5.4:4138722-4138741 | MS.gene22321:CDS | 65.0% | |
| TTGGCAATGTCGCTGGGGCG+AGG | - | chr5.4:4138773-4138792 | MS.gene22321:intron | 65.0% | |
| CAATGTCGCTGGGGCGAGGC+AGG | - | chr5.4:4138777-4138796 | MS.gene22321:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 4138259 | 4143585 | 4138259 | ID=MS.gene22321 |
| chr5.4 | mRNA | 4138259 | 4143585 | 4138259 | ID=MS.gene22321.t1;Parent=MS.gene22321 |
| chr5.4 | exon | 4142558 | 4143585 | 4142558 | ID=MS.gene22321.t1.exon1;Parent=MS.gene22321.t1 |
| chr5.4 | CDS | 4142558 | 4143585 | 4142558 | ID=cds.MS.gene22321.t1;Parent=MS.gene22321.t1 |
| chr5.4 | exon | 4142260 | 4142325 | 4142260 | ID=MS.gene22321.t1.exon2;Parent=MS.gene22321.t1 |
| chr5.4 | CDS | 4142260 | 4142325 | 4142260 | ID=cds.MS.gene22321.t1;Parent=MS.gene22321.t1 |
| chr5.4 | exon | 4139573 | 4139717 | 4139573 | ID=MS.gene22321.t1.exon3;Parent=MS.gene22321.t1 |
| chr5.4 | CDS | 4139573 | 4139717 | 4139573 | ID=cds.MS.gene22321.t1;Parent=MS.gene22321.t1 |
| chr5.4 | exon | 4139258 | 4139476 | 4139258 | ID=MS.gene22321.t1.exon4;Parent=MS.gene22321.t1 |
| chr5.4 | CDS | 4139258 | 4139476 | 4139258 | ID=cds.MS.gene22321.t1;Parent=MS.gene22321.t1 |
| chr5.4 | exon | 4138894 | 4139083 | 4138894 | ID=MS.gene22321.t1.exon5;Parent=MS.gene22321.t1 |
| chr5.4 | CDS | 4138894 | 4139083 | 4138894 | ID=cds.MS.gene22321.t1;Parent=MS.gene22321.t1 |
| chr5.4 | exon | 4138586 | 4138781 | 4138586 | ID=MS.gene22321.t1.exon6;Parent=MS.gene22321.t1 |
| chr5.4 | CDS | 4138586 | 4138781 | 4138586 | ID=cds.MS.gene22321.t1;Parent=MS.gene22321.t1 |
| chr5.4 | exon | 4138259 | 4138373 | 4138259 | ID=MS.gene22321.t1.exon7;Parent=MS.gene22321.t1 |
| chr5.4 | CDS | 4138259 | 4138373 | 4138259 | ID=cds.MS.gene22321.t1;Parent=MS.gene22321.t1 |
| Gene Sequence |
| Protein sequence |
