Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036870.t1 | XP_003609202.1 | 97.1 | 410 | 12 | 0 | 1 | 410 | 1 | 410 | 1.60E-218 | 768.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036870.t1 | Q1EBV7 | 76.6 | 415 | 86 | 4 | 1 | 410 | 1 | 409 | 1.7e-168 | 593.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036870.t1 | G7JU57 | 97.1 | 410 | 12 | 0 | 1 | 410 | 1 | 410 | 1.2e-218 | 768.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene20373 | MS.gene036870 | PPI |
MS.gene22571 | MS.gene036870 | PPI |
MS.gene015492 | MS.gene036870 | PPI |
MS.gene20372 | MS.gene036870 | PPI |
MS.gene025758 | MS.gene036870 | PPI |
MS.gene015491 | MS.gene036870 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036870.t1 | MTR_4g113090 | 97.073 | 410 | 12 | 0 | 1 | 410 | 1 | 410 | 0.0 | 808 |
MS.gene036870.t1 | MTR_2g073190 | 44.985 | 329 | 179 | 2 | 79 | 406 | 354 | 681 | 1.64e-82 | 266 |
MS.gene036870.t1 | MTR_2g073070 | 48.729 | 236 | 119 | 2 | 172 | 406 | 6 | 240 | 4.21e-66 | 211 |
MS.gene036870.t1 | MTR_7g053090 | 41.000 | 300 | 172 | 3 | 100 | 395 | 94 | 392 | 5.00e-64 | 211 |
MS.gene036870.t1 | MTR_5g011440 | 34.551 | 356 | 214 | 6 | 62 | 398 | 61 | 416 | 1.90e-55 | 189 |
MS.gene036870.t1 | MTR_5g011440 | 34.551 | 356 | 214 | 6 | 62 | 398 | 68 | 423 | 1.99e-55 | 189 |
MS.gene036870.t1 | MTR_5g011440 | 34.808 | 339 | 202 | 6 | 62 | 381 | 68 | 406 | 2.30e-52 | 180 |
MS.gene036870.t1 | MTR_5g011450 | 32.143 | 308 | 198 | 4 | 97 | 393 | 10 | 317 | 7.78e-49 | 169 |
MS.gene036870.t1 | MTR_2g073080 | 35.938 | 128 | 70 | 5 | 46 | 170 | 44 | 162 | 5.09e-15 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036870.t1 | AT2G26900 | 76.627 | 415 | 86 | 4 | 1 | 410 | 1 | 409 | 0.0 | 603 |
MS.gene036870.t1 | AT1G78560 | 47.305 | 334 | 169 | 5 | 75 | 404 | 71 | 401 | 9.78e-91 | 280 |
MS.gene036870.t1 | AT3G25410 | 40.127 | 314 | 181 | 4 | 90 | 397 | 97 | 409 | 2.40e-65 | 215 |
MS.gene036870.t1 | AT4G12030 | 36.364 | 319 | 189 | 6 | 93 | 397 | 86 | 404 | 4.13e-58 | 195 |
MS.gene036870.t1 | AT4G12030 | 36.741 | 313 | 184 | 6 | 99 | 397 | 1 | 313 | 2.16e-57 | 191 |
MS.gene036870.t1 | AT4G22840 | 35.855 | 304 | 184 | 4 | 103 | 395 | 98 | 401 | 6.03e-57 | 192 |
MS.gene036870.t1 | AT4G12030 | 37.407 | 270 | 158 | 5 | 139 | 397 | 1 | 270 | 1.56e-49 | 169 |
MS.gene036870.t1 | AT4G12030 | 37.407 | 270 | 158 | 5 | 139 | 397 | 1 | 270 | 1.56e-49 | 169 |
MS.gene036870.t1 | AT4G12030 | 37.407 | 270 | 158 | 5 | 139 | 397 | 1 | 270 | 1.56e-49 | 169 |
Find 97 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCATTTGCTATTGGTTAT+TGG | 0.150047 | 8.1:+13205502 | MS.gene036870:CDS |
GGGTTTCCTCATGCTGTCTA+TGG | 0.198961 | 8.1:+13203108 | MS.gene036870:CDS |
TCTTGCAACTGGTCTTATTT+TGG | 0.200101 | 8.1:+13203857 | MS.gene036870:CDS |
CGAGGTGGATAGGTATAATT+TGG | 0.253688 | 8.1:-13200687 | None:intergenic |
CATGCTGCTGCATTTGCTAT+TGG | 0.299073 | 8.1:+13205495 | MS.gene036870:CDS |
ACATACCGAAATGATTATTA+AGG | 0.327038 | 8.1:-13200719 | None:intergenic |
TGCAATTAGAAGTGAGTTGC+AGG | 0.332973 | 8.1:+13200868 | MS.gene036870:CDS |
TTCTACAGGTGTTCAACTAT+TGG | 0.336019 | 8.1:+13204606 | MS.gene036870:intron |
TTGTATGCGCAGGTCATCTT+GGG | 0.340243 | 8.1:+13202925 | MS.gene036870:intron |
TCTTTGTCATCAACGGGAAT+TGG | 0.350500 | 8.1:-13206319 | None:intergenic |
AATATCCTTAATAATCATTT+CGG | 0.364566 | 8.1:+13200714 | MS.gene036870:CDS |
TAGTCCATCTAGCGTCAAAA+AGG | 0.368389 | 8.1:+13200930 | MS.gene036870:CDS |
GACCTATTTACTCTTGGCTT+GGG | 0.369788 | 8.1:+13203088 | MS.gene036870:CDS |
TTCTCAGACACTAAAACTTT+CGG | 0.372149 | 8.1:+13203830 | MS.gene036870:intron |
CTTGTATGCGCAGGTCATCT+TGG | 0.374061 | 8.1:+13202924 | MS.gene036870:intron |
ATCTTACCTCCCACAATTGT+AGG | 0.403675 | 8.1:-13205048 | None:intergenic |
GATTATCTTTGAAGTGAACT+TGG | 0.415890 | 8.1:-13205231 | None:intergenic |
AACCCAAGCCAAGAGTAAAT+AGG | 0.419662 | 8.1:-13203090 | None:intergenic |
TTAGCACCAGTAGCAACAAT+TGG | 0.423758 | 8.1:-13200899 | None:intergenic |
GGTTTCCTCATGCTGTCTAT+GGG | 0.424749 | 8.1:+13203109 | MS.gene036870:CDS |
CTCGTGTTGTCCTGGAGGTC+AGG | 0.424832 | 8.1:+13203881 | MS.gene036870:CDS |
AAGTCGTCTTTGTCATCAAC+GGG | 0.430697 | 8.1:-13206325 | None:intergenic |
TGGATGTCAAGAATATCATT+TGG | 0.431918 | 8.1:+13205522 | MS.gene036870:CDS |
GGAGTGCTCTAGCTGTGTAT+TGG | 0.435900 | 8.1:+13206287 | MS.gene036870:CDS |
GAACTTACAGCAGCATCAAC+AGG | 0.438663 | 8.1:-13204681 | None:intergenic |
CTTTCGGCTCCTCTTGCAAC+TGG | 0.440648 | 8.1:+13203846 | MS.gene036870:CDS |
TCAGCTTCAACAAACATATC+TGG | 0.448870 | 8.1:+13202740 | MS.gene036870:CDS |
ATCTATCGAGTGTGGGATGC+AGG | 0.454978 | 8.1:+13205566 | MS.gene036870:CDS |
CCAGTAGCAACAATTGGATT+AGG | 0.455683 | 8.1:-13200893 | None:intergenic |
TTTATTTCAGGTAACTTGGT+TGG | 0.456017 | 8.1:+13203060 | MS.gene036870:intron |
AAGACAGTTCTTACAGCAGC+TGG | 0.466585 | 8.1:-13202970 | None:intergenic |
CCTAATCCAATTGTTGCTAC+TGG | 0.467233 | 8.1:+13200893 | MS.gene036870:CDS |
AACTCTGGGCATGGAAGCCA+TGG | 0.467872 | 8.1:-13200637 | None:intergenic |
ACATTTGATGCCTGACCTCC+AGG | 0.471096 | 8.1:-13203891 | None:intergenic |
GGTATAATTTGGCTTAAGAA+TGG | 0.471739 | 8.1:-13200676 | None:intergenic |
TGATGACAAAGACGACTTCA+AGG | 0.472825 | 8.1:+13206330 | MS.gene036870:CDS |
GAGACAGACCTATTTACTCT+TGG | 0.473070 | 8.1:+13203082 | MS.gene036870:CDS |
GAGATGTTCCTGAAAGTGCT+GGG | 0.473507 | 8.1:+13202762 | MS.gene036870:CDS |
TGCTGTCAGTGTTGTCTGCA+TGG | 0.473678 | 8.1:+13206146 | MS.gene036870:CDS |
TGACTTTATTTCAGGTAACT+TGG | 0.475397 | 8.1:+13203056 | MS.gene036870:intron |
GGAGATGTTCCTGAAAGTGC+TGG | 0.475562 | 8.1:+13202761 | MS.gene036870:CDS |
AGCCTTAGACTTACCCAAAC+CGG | 0.475608 | 8.1:-13202833 | None:intergenic |
AGACCTATTTACTCTTGGCT+TGG | 0.477469 | 8.1:+13203087 | MS.gene036870:CDS |
ATCACGGTCACACCTTTGAT+AGG | 0.479069 | 8.1:+13205251 | MS.gene036870:CDS |
ATGGTCTCTGAAAATAACTC+TGG | 0.487045 | 8.1:-13200652 | None:intergenic |
AGAGAGAGCAACGTTTCCCT+TGG | 0.489152 | 8.1:-13203928 | None:intergenic |
TGTTTGCAGAGCTCTGCACT+TGG | 0.497307 | 8.1:+13206072 | MS.gene036870:intron |
GTGCTCTAGCTGTGTATTGG+AGG | 0.507859 | 8.1:+13206290 | MS.gene036870:CDS |
ACTGTCGGCATGCAGCTTGG+TGG | 0.511242 | 8.1:+13206265 | MS.gene036870:intron |
ATTATCTTTGAAGTGAACTT+GGG | 0.524375 | 8.1:-13205230 | None:intergenic |
CTGTCGGCATGCAGCTTGGT+GGG | 0.528748 | 8.1:+13206266 | MS.gene036870:intron |
CTCCTAACGAAGCTTCTAGC+TGG | 0.529020 | 8.1:+13204648 | MS.gene036870:CDS |
GACCAGCTAGAAGCTTCGTT+AGG | 0.533754 | 8.1:-13204650 | None:intergenic |
TCTTACCTCCCACAATTGTA+GGG | 0.534398 | 8.1:-13205047 | None:intergenic |
CTTGAAAGGTGCTAATTGCC+AGG | 0.540089 | 8.1:-13205014 | None:intergenic |
TATTTGATCAAGCCCATGCT+AGG | 0.545275 | 8.1:+13203292 | MS.gene036870:CDS |
GATATTCCTCCGAGGTGGAT+AGG | 0.546749 | 8.1:-13200697 | None:intergenic |
TTACTGGGCTTGCACATAGG+AGG | 0.562585 | 8.1:-13205289 | None:intergenic |
TGTTGCAACATACATATCCA+AGG | 0.564619 | 8.1:+13203911 | MS.gene036870:CDS |
GACGATGTCTGCGAAATCCG+TGG | 0.569012 | 8.1:+13203158 | MS.gene036870:CDS |
CGCACAATATCTATCGAGTG+TGG | 0.573334 | 8.1:+13205558 | MS.gene036870:CDS |
TGATTGTCCCTTACAGTCCA+CGG | 0.575002 | 8.1:-13203175 | None:intergenic |
AGGGACTAAAACAACTTGAA+AGG | 0.575131 | 8.1:-13205028 | None:intergenic |
GCAGCATGTAAAGCAAGGAC+TGG | 0.578322 | 8.1:-13205480 | None:intergenic |
GTCAGAATAACTCCTATCAA+AGG | 0.579554 | 8.1:-13205263 | None:intergenic |
GCTAGAAGCTTCGTTAGGAG+TGG | 0.586839 | 8.1:-13204645 | None:intergenic |
CAGACAACACTGACAGCAGA+AGG | 0.589026 | 8.1:-13206141 | None:intergenic |
TCTGAAAATAACTCTGGGCA+TGG | 0.589097 | 8.1:-13200646 | None:intergenic |
AGGAACAGCTACAAGAGGGT+TGG | 0.593524 | 8.1:-13206121 | None:intergenic |
TGGTCTCTGAAAATAACTCT+GGG | 0.595321 | 8.1:-13200651 | None:intergenic |
TGTATGCGCAGGTCATCTTG+GGG | 0.596551 | 8.1:+13202926 | MS.gene036870:intron |
AGATGTTCCTGAAAGTGCTG+GGG | 0.599940 | 8.1:+13202763 | MS.gene036870:CDS |
GCAATTAGAAGTGAGTTGCA+GGG | 0.600447 | 8.1:+13200869 | MS.gene036870:CDS |
TTGGTCTCGTGTTGTCCTGG+AGG | 0.601309 | 8.1:+13203876 | MS.gene036870:CDS |
GAAGTCGTCTTTGTCATCAA+CGG | 0.601839 | 8.1:-13206326 | None:intergenic |
AAAATAAGACCAGTTGCAAG+AGG | 0.609602 | 8.1:-13203855 | None:intergenic |
ATGCAGCAGCATGTAAAGCA+AGG | 0.610129 | 8.1:-13205485 | None:intergenic |
GTATGCGCAGGTCATCTTGG+GGG | 0.613520 | 8.1:+13202927 | MS.gene036870:intron |
GATGTTCCTGAAAGTGCTGG+GGG | 0.615383 | 8.1:+13202764 | MS.gene036870:CDS |
TACTGGGCTTGCACATAGGA+GGG | 0.618976 | 8.1:-13205288 | None:intergenic |
GCAGAAGGAACAGCTACAAG+AGG | 0.619284 | 8.1:-13206126 | None:intergenic |
AACTTACTGGGCTTGCACAT+AGG | 0.620387 | 8.1:-13205292 | None:intergenic |
TCAAACCCATAGACAGCATG+AGG | 0.627326 | 8.1:-13203114 | None:intergenic |
GCACAATATCTATCGAGTGT+GGG | 0.631842 | 8.1:+13205559 | MS.gene036870:CDS |
CAGAAGGAACAGCTACAAGA+GGG | 0.632800 | 8.1:-13206125 | None:intergenic |
GTTCACTTCAAAGATAATCA+CGG | 0.634653 | 8.1:+13205235 | MS.gene036870:CDS |
TTAGTCCCTACAATTGTGGG+AGG | 0.636420 | 8.1:+13205042 | MS.gene036870:CDS |
GTTGCAACATACATATCCAA+GGG | 0.644060 | 8.1:+13203912 | MS.gene036870:CDS |
TTTGACGCTAGATGGACTAA+GGG | 0.646699 | 8.1:-13200926 | None:intergenic |
TTAAGGATATTCCTCCGAGG+TGG | 0.654156 | 8.1:-13200702 | None:intergenic |
AATTTGGCTTAAGAATGGCA+TGG | 0.677374 | 8.1:-13200671 | None:intergenic |
TGGGCTTGCACATAGGAGGG+TGG | 0.695014 | 8.1:-13205285 | None:intergenic |
CAAATTATACCTATCCACCT+CGG | 0.703278 | 8.1:+13200688 | MS.gene036870:CDS |
CAGCTGGCTTGTAAATACCG+AGG | 0.715500 | 8.1:-13202954 | None:intergenic |
ATTATACCTATCCACCTCGG+AGG | 0.727862 | 8.1:+13200691 | MS.gene036870:CDS |
TGTCAGTGTTGTCTGCATGG+CGG | 0.751349 | 8.1:+13206149 | MS.gene036870:CDS |
TTATTAAGGATATTCCTCCG+AGG | 0.766658 | 8.1:-13200705 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAAAATACAAAATACAT+AGG | - | chr8.1:13204000-13204019 | None:intergenic | 10.0% |
!!! | GTATTTCTTTAATTTTTTTT+TGG | + | chr8.1:13203331-13203350 | MS.gene036870:intron | 10.0% |
!!! | TAATAAGATAATAATTTTTC+GGG | + | chr8.1:13201707-13201726 | MS.gene036870:intron | 10.0% |
!!! | TATTAATTTATGATTTTCTT+GGG | - | chr8.1:13201755-13201774 | None:intergenic | 10.0% |
!!! | TTATTAATTTATGATTTTCT+TGG | - | chr8.1:13201756-13201775 | None:intergenic | 10.0% |
!! | AAATTATTAATCTATTGATC+TGG | - | chr8.1:13205913-13205932 | None:intergenic | 15.0% |
!! | AATATCCTTAATAATCATTT+CGG | + | chr8.1:13200714-13200733 | MS.gene036870:CDS | 15.0% |
!! | TAAATTAGAAACCAATTATA+TGG | + | chr8.1:13204177-13204196 | MS.gene036870:intron | 15.0% |
!! | TCTAAATTAATAAATTTCTC+CGG | + | chr8.1:13202040-13202059 | MS.gene036870:intron | 15.0% |
!!! | AAACTCTTTAATTTAATACT+CGG | + | chr8.1:13201603-13201622 | MS.gene036870:intron | 15.0% |
!!! | AATGTTTTTGCATTATTATT+TGG | + | chr8.1:13205184-13205203 | MS.gene036870:intron | 15.0% |
!!! | AGTTTTTCAATTTTTTACAT+TGG | - | chr8.1:13201679-13201698 | None:intergenic | 15.0% |
!!! | ATGTTGATTATATATACATA+TGG | + | chr8.1:13205705-13205724 | MS.gene036870:intron | 15.0% |
!!! | TAGGAATTTTAATTTAAAGT+AGG | + | chr8.1:13201458-13201477 | MS.gene036870:intron | 15.0% |
!!! | TCTAAAATAATAAATTTGTC+CGG | + | chr8.1:13201641-13201660 | MS.gene036870:intron | 15.0% |
!!! | TTACTATTTTACCATATAAT+TGG | - | chr8.1:13204191-13204210 | None:intergenic | 15.0% |
!!! | TTGTATTTTATTTTTTCTCT+GGG | + | chr8.1:13204007-13204026 | MS.gene036870:intron | 15.0% |
!!! | TTTGTATTTTATTTTTTCTC+TGG | + | chr8.1:13204006-13204025 | MS.gene036870:intron | 15.0% |
!!! | TTTTACATGTTTTGTATTAT+TGG | + | chr8.1:13200807-13200826 | MS.gene036870:intron | 15.0% |
!! | AAATATTTGTAGAATGAAGA+GGG | - | chr8.1:13205598-13205617 | None:intergenic | 20.0% |
!! | AATAAATCATAATTAGTGGT+AGG | - | chr8.1:13203236-13203255 | None:intergenic | 20.0% |
!! | AATAGTAAAACTTATAGGAT+TGG | + | chr8.1:13204203-13204222 | MS.gene036870:intron | 20.0% |
!! | AATGAAAATCAGAAAAACAA+AGG | + | chr8.1:13202532-13202551 | MS.gene036870:intron | 20.0% |
!! | ACACAATAAATCATAATTAG+TGG | - | chr8.1:13203240-13203259 | None:intergenic | 20.0% |
!! | AGTAATATATACACGTTTAT+AGG | + | chr8.1:13205977-13205996 | MS.gene036870:intron | 20.0% |
!! | ATATACATTACCACAAATTT+AGG | - | chr8.1:13204315-13204334 | None:intergenic | 20.0% |
!! | ATTATATATACATATGGAGT+TGG | + | chr8.1:13205711-13205730 | MS.gene036870:intron | 20.0% |
!! | ATTCTGATTTATTTCATTGA+TGG | + | chr8.1:13202395-13202414 | MS.gene036870:intron | 20.0% |
!! | CTCTATAAATTAATAATGTC+AGG | - | chr8.1:13202067-13202086 | None:intergenic | 20.0% |
!! | GGTAAAATAGTAAAACTTAT+AGG | + | chr8.1:13204198-13204217 | MS.gene036870:intron | 20.0% |
!! | TGACAAAAAAATGAAATAAC+TGG | + | chr8.1:13201015-13201034 | MS.gene036870:intron | 20.0% |
!! | TGATTATTACTTATTACTGT+CGG | + | chr8.1:13206250-13206269 | MS.gene036870:intron | 20.0% |
!! | TGGTAATTCAAAATATAACA+GGG | - | chr8.1:13203419-13203438 | None:intergenic | 20.0% |
!! | TTAGAAGTTACATTACTTAA+TGG | - | chr8.1:13202249-13202268 | None:intergenic | 20.0% |
!! | TTCTGATTTATTTCATTGAT+GGG | + | chr8.1:13202396-13202415 | MS.gene036870:intron | 20.0% |
!!! | ATCTAGTAATCATCTATTTT+AGG | + | chr8.1:13205652-13205671 | MS.gene036870:intron | 20.0% |
!!! | ATTAACTTTTTCACATGATT+AGG | - | chr8.1:13204841-13204860 | None:intergenic | 20.0% |
!!! | TAAGAAATTGGAAAGATTTT+AGG | - | chr8.1:13202871-13202890 | None:intergenic | 20.0% |
!!! | TATGTTTTTTTTAGGCTTTT+AGG | + | chr8.1:13205678-13205697 | MS.gene036870:intron | 20.0% |
!!! | TATTGTTATGACTTTATTTC+AGG | + | chr8.1:13203048-13203067 | MS.gene036870:intron | 20.0% |
!!! | TTAATTTAAAGTAGGAACAA+GGG | + | chr8.1:13201466-13201485 | MS.gene036870:intron | 20.0% |
!!! | TTAGGATGTATGTTTTTTTT+AGG | + | chr8.1:13205670-13205689 | MS.gene036870:intron | 20.0% |
!!! | TTTAATTTAAAGTAGGAACA+AGG | + | chr8.1:13201465-13201484 | MS.gene036870:intron | 20.0% |
!!! | TTTCAATAATTTTCTCATAC+TGG | - | chr8.1:13202796-13202815 | None:intergenic | 20.0% |
!!! | TTTTGTTTGTAATTGTTGAA+TGG | + | chr8.1:13201284-13201303 | MS.gene036870:intron | 20.0% |
! | AAAATTAGCATTAACAATCG+TGG | - | chr8.1:13202180-13202199 | None:intergenic | 25.0% |
! | AAACTAAACAGTCTAATAGA+AGG | - | chr8.1:13206193-13206212 | None:intergenic | 25.0% |
! | AATATTTGTAGAATGAAGAG+GGG | - | chr8.1:13205597-13205616 | None:intergenic | 25.0% |
! | ACAGAACAAATAAATAGAAG+TGG | - | chr8.1:13203659-13203678 | None:intergenic | 25.0% |
! | ACATACCGAAATGATTATTA+AGG | - | chr8.1:13200722-13200741 | None:intergenic | 25.0% |
! | ACATAGCTAGTTATTTATTG+AGG | + | chr8.1:13203554-13203573 | MS.gene036870:intron | 25.0% |
! | ACCAAGAACTTTAATCTAAA+AGG | - | chr8.1:13201426-13201445 | None:intergenic | 25.0% |
! | ATAATAATTGCAAGTGCTTT+AGG | + | chr8.1:13206019-13206038 | MS.gene036870:intron | 25.0% |
! | ATCAGAAAAACAAAGGAAAA+TGG | + | chr8.1:13202539-13202558 | MS.gene036870:intron | 25.0% |
! | ATGACTTGAACTAAATTTCT+GGG | + | chr8.1:13205936-13205955 | MS.gene036870:intron | 25.0% |
! | ATTATACCAAAGTAAACTGT+TGG | - | chr8.1:13205356-13205375 | None:intergenic | 25.0% |
! | ATTGATATAATCTATCTTGC+CGG | + | chr8.1:13202350-13202369 | MS.gene036870:intron | 25.0% |
! | CAAATATTTGTAGAATGAAG+AGG | - | chr8.1:13205599-13205618 | None:intergenic | 25.0% |
! | CAATCAAAATCAACTTGTAT+GGG | - | chr8.1:13204138-13204157 | None:intergenic | 25.0% |
! | CTACTGAACAATTAAGAAAT+TGG | - | chr8.1:13202883-13202902 | None:intergenic | 25.0% |
! | CTCTTCATTCTACAAATATT+TGG | + | chr8.1:13205597-13205616 | MS.gene036870:intron | 25.0% |
! | CTTATTGTTCTGTATAAGTT+AGG | + | chr8.1:13202601-13202620 | MS.gene036870:intron | 25.0% |
! | GAAGTTAATGTTAGCAAATT+TGG | - | chr8.1:13203807-13203826 | None:intergenic | 25.0% |
! | GAGACAAATATTTGTAAGAT+TGG | + | chr8.1:13203720-13203739 | MS.gene036870:intron | 25.0% |
! | GTATACCTAAAATTCAGAAA+TGG | - | chr8.1:13202295-13202314 | None:intergenic | 25.0% |
! | GTGGTAATTCAAAATATAAC+AGG | - | chr8.1:13203420-13203439 | None:intergenic | 25.0% |
! | TAAATTAATAATGTCAGGAC+CGG | - | chr8.1:13202062-13202081 | None:intergenic | 25.0% |
! | TCAATCAAAATCAACTTGTA+TGG | - | chr8.1:13204139-13204158 | None:intergenic | 25.0% |
! | TGATAACAATCATAAGTCAA+TGG | - | chr8.1:13203475-13203494 | None:intergenic | 25.0% |
! | TTCTAGTAATTGAAGTTTGA+TGG | + | chr8.1:13201201-13201220 | MS.gene036870:intron | 25.0% |
!! | ATATAACTATGTGCTTTTCA+AGG | + | chr8.1:13202419-13202438 | MS.gene036870:intron | 25.0% |
!! | TCTTTGATAACAATCTTATG+TGG | - | chr8.1:13203439-13203458 | None:intergenic | 25.0% |
!!! | ATGATTTATTGTGTTTTTGC+AGG | + | chr8.1:13203246-13203265 | MS.gene036870:intron | 25.0% |
!!! | ATTATCTTTGAAGTGAACTT+GGG | - | chr8.1:13205233-13205252 | None:intergenic | 25.0% |
!!! | ATTTTTTCTCTGGGTTATTT+TGG | + | chr8.1:13204016-13204035 | MS.gene036870:intron | 25.0% |
!!! | CAAGTTGATTTTGATTGAAT+TGG | + | chr8.1:13204141-13204160 | MS.gene036870:intron | 25.0% |
!!! | TATAACTTGTTCAACTTACT+GGG | - | chr8.1:13205307-13205326 | None:intergenic | 25.0% |
!!! | TATTTATTGAGGCCATTTTT+GGG | + | chr8.1:13203565-13203584 | MS.gene036870:intron | 25.0% |
!!! | TTACATGTTTTAGAGTTTGT+TGG | + | chr8.1:13205085-13205104 | MS.gene036870:intron | 25.0% |
!!! | TTATTTATTGAGGCCATTTT+TGG | + | chr8.1:13203564-13203583 | MS.gene036870:intron | 25.0% |
!!! | TTTATTAACAGCTTGCTAAT+AGG | - | chr8.1:13204779-13204798 | None:intergenic | 25.0% |
AAATCATAATTAGTGGTAGG+AGG | - | chr8.1:13203233-13203252 | None:intergenic | 30.0% | |
AATACATAGGAAACCAAACA+AGG | - | chr8.1:13203987-13204006 | None:intergenic | 30.0% | |
ACTGTACATACCAAACAAAA+AGG | - | chr8.1:13201960-13201979 | None:intergenic | 30.0% | |
ACTTGTTTATTGCTATGTCT+AGG | + | chr8.1:13202699-13202718 | MS.gene036870:intron | 30.0% | |
AGACAATGTCATATAGTAGT+TGG | - | chr8.1:13202575-13202594 | None:intergenic | 30.0% | |
AGCAATCTATGGTAAAATTC+CGG | - | chr8.1:13202372-13202391 | None:intergenic | 30.0% | |
AGGTGTTTGCAAATTGAATA+GGG | - | chr8.1:13204257-13204276 | None:intergenic | 30.0% | |
ATATTTGTAGAATGAAGAGG+GGG | - | chr8.1:13205596-13205615 | None:intergenic | 30.0% | |
ATGCTAAAATAACTTCATCG+AGG | - | chr8.1:13204489-13204508 | None:intergenic | 30.0% | |
ATTATATAGTGCTTTGTACC+TGG | + | chr8.1:13203519-13203538 | MS.gene036870:intron | 30.0% | |
ATTTATCTCGTACTACTAGT+TGG | + | chr8.1:13203745-13203764 | MS.gene036870:intron | 30.0% | |
ATTTCCAATGCATATGAACA+CGG | + | chr8.1:13201866-13201885 | MS.gene036870:intron | 30.0% | |
CAATTTGCAAACACCTAAAA+AGG | + | chr8.1:13204261-13204280 | MS.gene036870:intron | 30.0% | |
CATGTGAAAAAGTTAATAGC+TGG | + | chr8.1:13204844-13204863 | MS.gene036870:intron | 30.0% | |
CCCTTTCATGCATAAAAATA+GGG | - | chr8.1:13204714-13204733 | None:intergenic | 30.0% | |
GAAAAAGTTAATAGCTGGAT+AGG | + | chr8.1:13204849-13204868 | MS.gene036870:intron | 30.0% | |
GATGACTTGAACTAAATTTC+TGG | + | chr8.1:13205935-13205954 | MS.gene036870:intron | 30.0% | |
GTACAAACACTTCATATTGA+AGG | - | chr8.1:13201096-13201115 | None:intergenic | 30.0% | |
GTACAGTAAATGTAAACAAG+AGG | - | chr8.1:13201829-13201848 | None:intergenic | 30.0% | |
GTTACGAGTTAGCTAATTTA+GGG | + | chr8.1:13201257-13201276 | MS.gene036870:intron | 30.0% | |
GTTCACTTCAAAGATAATCA+CGG | + | chr8.1:13205235-13205254 | MS.gene036870:CDS | 30.0% | |
TACCTAAAATTCAGAAATGG+AGG | - | chr8.1:13202292-13202311 | None:intergenic | 30.0% | |
TAGCAAATTTGGCATGATAT+AGG | - | chr8.1:13203796-13203815 | None:intergenic | 30.0% | |
TAGGTGTTTGCAAATTGAAT+AGG | - | chr8.1:13204258-13204277 | None:intergenic | 30.0% | |
TCCCTTTCATGCATAAAAAT+AGG | - | chr8.1:13204715-13204734 | None:intergenic | 30.0% | |
TGACTTGAACTAAATTTCTG+GGG | + | chr8.1:13205937-13205956 | MS.gene036870:intron | 30.0% | |
TGCTAAAATAACTTCATCGA+GGG | - | chr8.1:13204488-13204507 | None:intergenic | 30.0% | |
TGGATGTCAAGAATATCATT+TGG | + | chr8.1:13205522-13205541 | MS.gene036870:CDS | 30.0% | |
TGTTAAAGATCCTGTATGAA+GGG | + | chr8.1:13201342-13201361 | MS.gene036870:intron | 30.0% | |
TTATTCCAGGAAGAAAAGAA+TGG | - | chr8.1:13202461-13202480 | None:intergenic | 30.0% | |
TTCTCAGACACTAAAACTTT+CGG | + | chr8.1:13203830-13203849 | MS.gene036870:intron | 30.0% | |
TTGATTGAATTGGATCAGAT+CGG | + | chr8.1:13204151-13204170 | MS.gene036870:intron | 30.0% | |
TTGGGACCGAAAATTATAAA+GGG | - | chr8.1:13201737-13201756 | None:intergenic | 30.0% | |
! | AACTTTAACCACTCTTTTTC+CGG | + | chr8.1:13202814-13202833 | MS.gene036870:CDS | 30.0% |
! | ATCCTCCATTTCTGAATTTT+AGG | + | chr8.1:13202287-13202306 | MS.gene036870:intron | 30.0% |
! | CGTCTTTTCAAATGACAAAA+GGG | - | chr8.1:13201316-13201335 | None:intergenic | 30.0% |
! | GAATTTTACCATAGATTGCT+AGG | + | chr8.1:13202372-13202391 | MS.gene036870:intron | 30.0% |
! | GCATTATTATTTGGCAGTTT+TGG | + | chr8.1:13205193-13205212 | MS.gene036870:intron | 30.0% |
! | GCATTTAAGTTCTTTATTCC+AGG | - | chr8.1:13202474-13202493 | None:intergenic | 30.0% |
! | GCCTTTTAGATTAAAGTTCT+TGG | + | chr8.1:13201422-13201441 | MS.gene036870:intron | 30.0% |
! | GGAGATCCCTTTATAATTTT+CGG | + | chr8.1:13201728-13201747 | MS.gene036870:intron | 30.0% |
! | GGTATAATTTGGCTTAAGAA+TGG | - | chr8.1:13200679-13200698 | None:intergenic | 30.0% |
! | TGACTTTATTTCAGGTAACT+TGG | + | chr8.1:13203056-13203075 | MS.gene036870:intron | 30.0% |
! | TTTATTTCAGGTAACTTGGT+TGG | + | chr8.1:13203060-13203079 | MS.gene036870:intron | 30.0% |
!! | AGGTTTGGTTCTTAATGATT+AGG | + | chr8.1:13205150-13205169 | MS.gene036870:intron | 30.0% |
!! | ATTTATTGTGTTTTTGCAGG+TGG | + | chr8.1:13203249-13203268 | MS.gene036870:intron | 30.0% |
!! | CCTTTTGTCATTTGAAAAGA+CGG | + | chr8.1:13201314-13201333 | MS.gene036870:intron | 30.0% |
!! | CTATAACTTGTTCAACTTAC+TGG | - | chr8.1:13205308-13205327 | None:intergenic | 30.0% |
!! | CTTTTGTCATTTGAAAAGAC+GGG | + | chr8.1:13201315-13201334 | MS.gene036870:intron | 30.0% |
!! | GACTAATTTGCCTTTTTGTT+TGG | + | chr8.1:13201947-13201966 | MS.gene036870:intron | 30.0% |
!! | GATTATCTTTGAAGTGAACT+TGG | - | chr8.1:13205234-13205253 | None:intergenic | 30.0% |
!! | TCTTGGTTCTATTTCAAAGT+AGG | + | chr8.1:13201439-13201458 | MS.gene036870:intron | 30.0% |
!! | TTAACTTGCATTTCCTTGTT+TGG | + | chr8.1:13203971-13203990 | MS.gene036870:intron | 30.0% |
!! | TTTATTGTGTTTTTGCAGGT+GGG | + | chr8.1:13203250-13203269 | MS.gene036870:intron | 30.0% |
!!! | ATGTATTGACTTTTCAGATC+GGG | + | chr8.1:13205412-13205431 | MS.gene036870:intron | 30.0% |
!!! | ATGTTTTAGAGTTTGTTGGA+CGG | + | chr8.1:13205089-13205108 | MS.gene036870:intron | 30.0% |
!!! | CATGTATTGACTTTTCAGAT+CGG | + | chr8.1:13205411-13205430 | MS.gene036870:intron | 30.0% |
!!! | CCCTATTTTTATGCATGAAA+GGG | + | chr8.1:13204711-13204730 | MS.gene036870:intron | 30.0% |
!!! | GCTATTTGCATTTTTTATGC+TGG | + | chr8.1:13204070-13204089 | MS.gene036870:intron | 30.0% |
!!! | TAATTTTCTCATACTGGTTC+AGG | - | chr8.1:13202790-13202809 | None:intergenic | 30.0% |
AAAATAAGACCAGTTGCAAG+AGG | - | chr8.1:13203858-13203877 | None:intergenic | 35.0% | |
AAATCAACTTGTATGGGATC+AGG | - | chr8.1:13204132-13204151 | None:intergenic | 35.0% | |
AACACTGCATATCCCAAAAA+TGG | - | chr8.1:13203580-13203599 | None:intergenic | 35.0% | |
AAGCAATTACAGATAACCTC+AGG | + | chr8.1:13202205-13202224 | MS.gene036870:intron | 35.0% | |
AATAGTTGAACACCTGTAGA+AGG | - | chr8.1:13204607-13204626 | None:intergenic | 35.0% | |
AATTACTCTTGTGTGTGTCA+TGG | + | chr8.1:13204442-13204461 | MS.gene036870:intron | 35.0% | |
AGGGACTAAAACAACTTGAA+AGG | - | chr8.1:13205031-13205050 | None:intergenic | 35.0% | |
ATAACTGGATGTAACCAAGA+TGG | + | chr8.1:13201030-13201049 | MS.gene036870:intron | 35.0% | |
ATAGCTGGATAGGATACTTT+CGG | + | chr8.1:13204859-13204878 | MS.gene036870:intron | 35.0% | |
ATAGTTGAACACCTGTAGAA+GGG | - | chr8.1:13204606-13204625 | None:intergenic | 35.0% | |
ATATGCAGTGTTTCTTTGTG+TGG | + | chr8.1:13203588-13203607 | MS.gene036870:intron | 35.0% | |
ATCAGAATCCTAGCAATCTA+TGG | - | chr8.1:13202383-13202402 | None:intergenic | 35.0% | |
ATCTTCTGCAATTTGACAGT+AGG | - | chr8.1:13205861-13205880 | None:intergenic | 35.0% | |
ATTGTTCAGTAGTTGAAAGC+TGG | + | chr8.1:13202891-13202910 | MS.gene036870:intron | 35.0% | |
CAAACACACACCTAAATTTG+TGG | + | chr8.1:13204302-13204321 | MS.gene036870:intron | 35.0% | |
CAAACAGCAAGAAAAGTTAG+AGG | - | chr8.1:13205838-13205857 | None:intergenic | 35.0% | |
CAAATTATACCTATCCACCT+CGG | + | chr8.1:13200688-13200707 | MS.gene036870:CDS | 35.0% | |
CACAAATTTAGGTGTGTGTT+TGG | - | chr8.1:13204304-13204323 | None:intergenic | 35.0% | |
CTGTTAAAGATCCTGTATGA+AGG | + | chr8.1:13201341-13201360 | MS.gene036870:intron | 35.0% | |
CTTGGGACCGAAAATTATAA+AGG | - | chr8.1:13201738-13201757 | None:intergenic | 35.0% | |
GCATAGCTTATACAAGCAAT+GGG | + | chr8.1:13201117-13201136 | MS.gene036870:intron | 35.0% | |
GGTTACGAGTTAGCTAATTT+AGG | + | chr8.1:13201256-13201275 | MS.gene036870:intron | 35.0% | |
GTCAGAATAACTCCTATCAA+AGG | - | chr8.1:13205266-13205285 | None:intergenic | 35.0% | |
GTGCAAATACTGTCAAGTAA+CGG | + | chr8.1:13202103-13202122 | MS.gene036870:intron | 35.0% | |
GTTGCAACATACATATCCAA+GGG | + | chr8.1:13203912-13203931 | MS.gene036870:CDS | 35.0% | |
TATACTAATGTGTCTCCACT+TGG | + | chr8.1:13205123-13205142 | MS.gene036870:intron | 35.0% | |
TATGCAGTGTTTCTTTGTGT+GGG | + | chr8.1:13203589-13203608 | MS.gene036870:intron | 35.0% | |
TCAGCTTCAACAAACATATC+TGG | + | chr8.1:13202740-13202759 | MS.gene036870:CDS | 35.0% | |
TCTGTATAAGTTAGGTACTC+TGG | + | chr8.1:13202609-13202628 | MS.gene036870:intron | 35.0% | |
TGCATAGCTTATACAAGCAA+TGG | + | chr8.1:13201116-13201135 | MS.gene036870:intron | 35.0% | |
TGTTGCAACATACATATCCA+AGG | + | chr8.1:13203911-13203930 | MS.gene036870:CDS | 35.0% | |
TGTTGTAGTAACGTTTGATC+TGG | + | chr8.1:13200739-13200758 | MS.gene036870:intron | 35.0% | |
TTATTAAGGATATTCCTCCG+AGG | - | chr8.1:13200708-13200727 | None:intergenic | 35.0% | |
TTCTACAGGTGTTCAACTAT+TGG | + | chr8.1:13204606-13204625 | MS.gene036870:intron | 35.0% | |
TTGTAGCCAACAGTTTACTT+TGG | + | chr8.1:13205347-13205366 | MS.gene036870:intron | 35.0% | |
! | AAAGTAAACTGTTGGCTACA+AGG | - | chr8.1:13205348-13205367 | None:intergenic | 35.0% |
! | AAGTAAACTGTTGGCTACAA+GGG | - | chr8.1:13205347-13205366 | None:intergenic | 35.0% |
! | AATTTGGCTTAAGAATGGCA+TGG | - | chr8.1:13200674-13200693 | None:intergenic | 35.0% |
! | AGAAGTTGTTTCCAGAAATC+AGG | + | chr8.1:13204562-13204581 | MS.gene036870:intron | 35.0% |
! | ATGGTCTCTGAAAATAACTC+TGG | - | chr8.1:13200655-13200674 | None:intergenic | 35.0% |
! | ATTACCTTTTTGACGCTAGA+TGG | - | chr8.1:13200937-13200956 | None:intergenic | 35.0% |
! | CATGTTATTTACCCTTCTAC+AGG | + | chr8.1:13204592-13204611 | MS.gene036870:intron | 35.0% |
! | CCGTCTTTTCAAATGACAAA+AGG | - | chr8.1:13201317-13201336 | None:intergenic | 35.0% |
! | CTAGTCCATAATCTTTGAGA+CGG | - | chr8.1:13202330-13202349 | None:intergenic | 35.0% |
! | GTAATTGAAGTTTGATGGAC+TGG | + | chr8.1:13201206-13201225 | MS.gene036870:intron | 35.0% |
! | TGAACTAAATTTCTGGGGAA+GGG | + | chr8.1:13205942-13205961 | MS.gene036870:intron | 35.0% |
! | TGGTCTCTGAAAATAACTCT+GGG | - | chr8.1:13200654-13200673 | None:intergenic | 35.0% |
! | TGTTGCTCTTTCTCTTTTTC+AGG | + | chr8.1:13204990-13205009 | MS.gene036870:intron | 35.0% |
! | TTCATATTGAAGGTGTGTCT+GGG | - | chr8.1:13201086-13201105 | None:intergenic | 35.0% |
! | TTCATCCATTCTTTTCTTCC+TGG | + | chr8.1:13202453-13202472 | MS.gene036870:intron | 35.0% |
! | TTGAACTAAATTTCTGGGGA+AGG | + | chr8.1:13205941-13205960 | MS.gene036870:intron | 35.0% |
!! | ATTAACAGCTTGCTAATAGG+AGG | - | chr8.1:13204776-13204795 | None:intergenic | 35.0% |
!! | CTGCATTTGCTATTGGTTAT+TGG | + | chr8.1:13205502-13205521 | MS.gene036870:CDS | 35.0% |
!! | GTTGCTCTTTCTCTTTTTCA+GGG | + | chr8.1:13204991-13205010 | MS.gene036870:intron | 35.0% |
!! | GTTTTAGTCCCTACAATTGT+GGG | + | chr8.1:13205039-13205058 | MS.gene036870:CDS | 35.0% |
!! | TAGTCCATAATCTTTGAGAC+GGG | - | chr8.1:13202329-13202348 | None:intergenic | 35.0% |
!!! | AATCAGAGAAGTACTTTTGC+AGG | - | chr8.1:13204359-13204378 | None:intergenic | 35.0% |
!!! | GCCCTATTTTTATGCATGAA+AGG | + | chr8.1:13204710-13204729 | MS.gene036870:intron | 35.0% |
!!! | TCTTGCAACTGGTCTTATTT+TGG | + | chr8.1:13203857-13203876 | MS.gene036870:CDS | 35.0% |
!!! | TGTTTTAGAGTTTGTTGGAC+GGG | + | chr8.1:13205090-13205109 | MS.gene036870:intron | 35.0% |
!!! | TGTTTTAGTCCCTACAATTG+TGG | + | chr8.1:13205038-13205057 | MS.gene036870:CDS | 35.0% |
!!! | TTTTTTACATTGGCCCAAGT+CGG | - | chr8.1:13201669-13201688 | None:intergenic | 35.0% |
AACCCAAGCCAAGAGTAAAT+AGG | - | chr8.1:13203093-13203112 | None:intergenic | 40.0% | |
AACTTCATCGAGGGATAACA+CGG | - | chr8.1:13204479-13204498 | None:intergenic | 40.0% | |
AAGTCGTCTTTGTCATCAAC+GGG | - | chr8.1:13206328-13206347 | None:intergenic | 40.0% | |
AATTACGTTGCAGTGAACCT+TGG | - | chr8.1:13201915-13201934 | None:intergenic | 40.0% | |
ACAGCAAGAAAAGTTAGAGG+TGG | - | chr8.1:13205835-13205854 | None:intergenic | 40.0% | |
ACGAGTTAGCTAATTTAGGG+CGG | + | chr8.1:13201260-13201279 | MS.gene036870:intron | 40.0% | |
ACTACCGTGTTCATATGCAT+TGG | - | chr8.1:13201873-13201892 | None:intergenic | 40.0% | |
ACTTGTATGGGATCAGGTTT+CGG | - | chr8.1:13204126-13204145 | None:intergenic | 40.0% | |
AGAAGTGGCAGACATCAATA+TGG | - | chr8.1:13203644-13203663 | None:intergenic | 40.0% | |
AGACCTATTTACTCTTGGCT+TGG | + | chr8.1:13203087-13203106 | MS.gene036870:CDS | 40.0% | |
ATACCTGGACTATAGCATAG+CGG | + | chr8.1:13201535-13201554 | MS.gene036870:intron | 40.0% | |
ATCTTACCTCCCACAATTGT+AGG | - | chr8.1:13205051-13205070 | None:intergenic | 40.0% | |
ATTACAGATAACCTCAGGCT+CGG | + | chr8.1:13202210-13202229 | MS.gene036870:intron | 40.0% | |
ATTACGTTGCAGTGAACCTT+GGG | - | chr8.1:13201914-13201933 | None:intergenic | 40.0% | |
CACTGCAACGTAATTCTAAG+AGG | + | chr8.1:13201920-13201939 | MS.gene036870:intron | 40.0% | |
CAGCAAGAAAAGTTAGAGGT+GGG | - | chr8.1:13205834-13205853 | None:intergenic | 40.0% | |
CATGTTGAGAACCTGATTTC+TGG | - | chr8.1:13204576-13204595 | None:intergenic | 40.0% | |
CCAGTAGCAACAATTGGATT+AGG | - | chr8.1:13200896-13200915 | None:intergenic | 40.0% | |
CCTAATCCAATTGTTGCTAC+TGG | + | chr8.1:13200893-13200912 | MS.gene036870:CDS | 40.0% | |
CGAGGTGGATAGGTATAATT+TGG | - | chr8.1:13200690-13200709 | None:intergenic | 40.0% | |
CGTAACCTGCATAATGCATA+CGG | - | chr8.1:13201243-13201262 | None:intergenic | 40.0% | |
CTAATTTACGTTGAGTCCCA+AGG | + | chr8.1:13201895-13201914 | MS.gene036870:intron | 40.0% | |
CTATGTTAAGTCCTACAACC+AGG | - | chr8.1:13203540-13203559 | None:intergenic | 40.0% | |
CTTACTCAGAATCATGGAGA+GGG | + | chr8.1:13201153-13201172 | MS.gene036870:intron | 40.0% | |
CTTGTCATTCTTGCTTTGCA+TGG | + | chr8.1:13205381-13205400 | MS.gene036870:intron | 40.0% | |
GAAGTCGTCTTTGTCATCAA+CGG | - | chr8.1:13206329-13206348 | None:intergenic | 40.0% | |
GACCTATTTACTCTTGGCTT+GGG | + | chr8.1:13203088-13203107 | MS.gene036870:CDS | 40.0% | |
GAGACAGACCTATTTACTCT+TGG | + | chr8.1:13203082-13203101 | MS.gene036870:CDS | 40.0% | |
GCAATGAAAAAGCCTAGCAT+GGG | - | chr8.1:13203307-13203326 | None:intergenic | 40.0% | |
GCAATTAGAAGTGAGTTGCA+GGG | + | chr8.1:13200869-13200888 | MS.gene036870:CDS | 40.0% | |
GCACAATATCTATCGAGTGT+GGG | + | chr8.1:13205559-13205578 | MS.gene036870:CDS | 40.0% | |
GCATTAACAATCGTGGATAG+CGG | - | chr8.1:13202173-13202192 | None:intergenic | 40.0% | |
GCTATAGCATTGCTACATAG+CGG | + | chr8.1:13202125-13202144 | MS.gene036870:intron | 40.0% | |
TAGTCCATCTAGCGTCAAAA+AGG | + | chr8.1:13200930-13200949 | MS.gene036870:CDS | 40.0% | |
TATTTGATCAAGCCCATGCT+AGG | + | chr8.1:13203292-13203311 | MS.gene036870:CDS | 40.0% | |
TCTGAAAATAACTCTGGGCA+TGG | - | chr8.1:13200649-13200668 | None:intergenic | 40.0% | |
TCTTACCTCCCACAATTGTA+GGG | - | chr8.1:13205050-13205069 | None:intergenic | 40.0% | |
TCTTTCTGCAGCTAGTTACA+TGG | + | chr8.1:13202989-13203008 | MS.gene036870:intron | 40.0% | |
TCTTTGTCATCAACGGGAAT+TGG | - | chr8.1:13206322-13206341 | None:intergenic | 40.0% | |
TGATGACAAAGACGACTTCA+AGG | + | chr8.1:13206330-13206349 | MS.gene036870:CDS | 40.0% | |
TGCAAAGCAAGAATGACAAG+TGG | - | chr8.1:13205381-13205400 | None:intergenic | 40.0% | |
TGCAATGAAAAAGCCTAGCA+TGG | - | chr8.1:13203308-13203327 | None:intergenic | 40.0% | |
TGCAATTAGAAGTGAGTTGC+AGG | + | chr8.1:13200868-13200887 | MS.gene036870:CDS | 40.0% | |
TGCTATAGTCCAGGTATAGT+CGG | - | chr8.1:13201532-13201551 | None:intergenic | 40.0% | |
TGTTATGGGAAGAGTGGAAA+AGG | - | chr8.1:13201509-13201528 | None:intergenic | 40.0% | |
TGTTTCCGTATGCATTATGC+AGG | + | chr8.1:13201235-13201254 | MS.gene036870:intron | 40.0% | |
TTAGCACCAGTAGCAACAAT+TGG | - | chr8.1:13200902-13200921 | None:intergenic | 40.0% | |
TTAGGTGTGTGTTTGGATTG+CGG | - | chr8.1:13204297-13204316 | None:intergenic | 40.0% | |
! | AACCACTCTTTTTCCGGTTT+GGG | + | chr8.1:13202820-13202839 | MS.gene036870:CDS | 40.0% |
! | ATGCTGGCTGTCTTTAAAAG+AGG | + | chr8.1:13204086-13204105 | MS.gene036870:intron | 40.0% |
! | CGGTACAAGAAAGCCTTTTT+AGG | - | chr8.1:13204277-13204296 | None:intergenic | 40.0% |
! | CTTCATATTGAAGGTGTGTC+TGG | - | chr8.1:13201087-13201106 | None:intergenic | 40.0% |
! | GAACTAAATTTCTGGGGAAG+GGG | + | chr8.1:13205943-13205962 | MS.gene036870:intron | 40.0% |
! | GTTTCTTTGTGTGGGTTACT+TGG | + | chr8.1:13203597-13203616 | MS.gene036870:intron | 40.0% |
! | TAACCACTCTTTTTCCGGTT+TGG | + | chr8.1:13202819-13202838 | MS.gene036870:CDS | 40.0% |
!! | AGTCCATAATCTTTGAGACG+GGG | - | chr8.1:13202328-13202347 | None:intergenic | 40.0% |
!! | CAGAACGAACAGACTTTTTC+AGG | - | chr8.1:13205796-13205815 | None:intergenic | 40.0% |
!! | GCGGAAGTGTTAAAAACTCA+AGG | + | chr8.1:13205441-13205460 | MS.gene036870:CDS | 40.0% |
!! | TGACTTTAACTTGTATGCGC+AGG | + | chr8.1:13202915-13202934 | MS.gene036870:intron | 40.0% |
!! | TTTGACGCTAGATGGACTAA+GGG | - | chr8.1:13200929-13200948 | None:intergenic | 40.0% |
!!! | GCTAGGCTTTTTCATTGCAA+TGG | + | chr8.1:13203309-13203328 | MS.gene036870:CDS | 40.0% |
!!! | GGGTTATTTTGGTTGCTGTT+TGG | + | chr8.1:13204027-13204046 | MS.gene036870:intron | 40.0% |
!!! | TTTTGACGCTAGATGGACTA+AGG | - | chr8.1:13200930-13200949 | None:intergenic | 40.0% |
AAATTTGTCCGGTTCCGACT+TGG | + | chr8.1:13201652-13201671 | MS.gene036870:intron | 45.0% | |
AACTTACTGGGCTTGCACAT+AGG | - | chr8.1:13205295-13205314 | None:intergenic | 45.0% | |
AAGACAGTTCTTACAGCAGC+TGG | - | chr8.1:13202973-13202992 | None:intergenic | 45.0% | |
AATTTGTCCGGTTCCGACTT+GGG | + | chr8.1:13201653-13201672 | MS.gene036870:intron | 45.0% | |
AGCCTTAGACTTACCCAAAC+CGG | - | chr8.1:13202836-13202855 | None:intergenic | 45.0% | |
AGTGCTTTGTACCTGGTTGT+AGG | + | chr8.1:13203526-13203545 | MS.gene036870:intron | 45.0% | |
ATCACGGTCACACCTTTGAT+AGG | + | chr8.1:13205251-13205270 | MS.gene036870:CDS | 45.0% | |
ATGCAGCAGCATGTAAAGCA+AGG | - | chr8.1:13205488-13205507 | None:intergenic | 45.0% | |
ATTATACCTATCCACCTCGG+AGG | + | chr8.1:13200691-13200710 | MS.gene036870:CDS | 45.0% | |
ATTCCGCTATGCTATAGTCC+AGG | - | chr8.1:13201541-13201560 | None:intergenic | 45.0% | |
CAGAAGGAACAGCTACAAGA+GGG | - | chr8.1:13206128-13206147 | None:intergenic | 45.0% | |
CCTCTCCATGATTCTGAGTA+AGG | - | chr8.1:13201155-13201174 | None:intergenic | 45.0% | |
CCTTACTCAGAATCATGGAG+AGG | + | chr8.1:13201152-13201171 | MS.gene036870:intron | 45.0% | |
CGCACAATATCTATCGAGTG+TGG | + | chr8.1:13205558-13205577 | MS.gene036870:CDS | 45.0% | |
GAACCAAACCTTACACCAAG+TGG | - | chr8.1:13205141-13205160 | None:intergenic | 45.0% | |
GAACTTACAGCAGCATCAAC+AGG | - | chr8.1:13204684-13204703 | None:intergenic | 45.0% | |
GCATGCCTTACTCAGAATCA+TGG | + | chr8.1:13201147-13201166 | MS.gene036870:intron | 45.0% | |
GGTTTCCTCATGCTGTCTAT+GGG | + | chr8.1:13203109-13203128 | MS.gene036870:CDS | 45.0% | |
GTTGATGCTGCTGTAAGTTC+TGG | + | chr8.1:13204684-13204703 | MS.gene036870:intron | 45.0% | |
TACCCAAACCGGAAAAAGAG+TGG | - | chr8.1:13202825-13202844 | None:intergenic | 45.0% | |
TATACAAGCAATGGGCCTAG+TGG | + | chr8.1:13201125-13201144 | MS.gene036870:intron | 45.0% | |
TCAAACCCATAGACAGCATG+AGG | - | chr8.1:13203117-13203136 | None:intergenic | 45.0% | |
TCAGCTTTGCGTGTTTGAAG+AGG | - | chr8.1:13204403-13204422 | None:intergenic | 45.0% | |
TCATGGAGAGGGATGTGTAA+TGG | + | chr8.1:13201164-13201183 | MS.gene036870:intron | 45.0% | |
TGATTGTCCCTTACAGTCCA+CGG | - | chr8.1:13203178-13203197 | None:intergenic | 45.0% | |
TTAAGGATATTCCTCCGAGG+TGG | - | chr8.1:13200705-13200724 | None:intergenic | 45.0% | |
TTAGTCCCTACAATTGTGGG+AGG | + | chr8.1:13205042-13205061 | MS.gene036870:CDS | 45.0% | |
TTGTATGCGCAGGTCATCTT+GGG | + | chr8.1:13202925-13202944 | MS.gene036870:intron | 45.0% | |
! | AACAGACTAGCCCTTCATAC+AGG | - | chr8.1:13201355-13201374 | None:intergenic | 45.0% |
! | AAGTTAGAGGTGGGTTCTCT+TGG | - | chr8.1:13205825-13205844 | None:intergenic | 45.0% |
! | TAAACTGTTGGCTACAAGGG+TGG | - | chr8.1:13205344-13205363 | None:intergenic | 45.0% |
!! | AGATGTTCCTGAAAGTGCTG+GGG | + | chr8.1:13202763-13202782 | MS.gene036870:CDS | 45.0% |
!! | ATGTGTCTCCACTTGGTGTA+AGG | + | chr8.1:13205130-13205149 | MS.gene036870:intron | 45.0% |
!! | ATTTTGGTCTCGTGTTGTCC+TGG | + | chr8.1:13203873-13203892 | MS.gene036870:CDS | 45.0% |
!! | CATGCTGCTGCATTTGCTAT+TGG | + | chr8.1:13205495-13205514 | MS.gene036870:CDS | 45.0% |
!! | CCAGGTATAGTCGGTGTTAT+GGG | - | chr8.1:13201523-13201542 | None:intergenic | 45.0% |
!! | CTTGAAAGGTGCTAATTGCC+AGG | - | chr8.1:13205017-13205036 | None:intergenic | 45.0% |
!! | GAGATGTTCCTGAAAGTGCT+GGG | + | chr8.1:13202762-13202781 | MS.gene036870:CDS | 45.0% |
!! | GTCCATAATCTTTGAGACGG+GGG | - | chr8.1:13202327-13202346 | None:intergenic | 45.0% |
!! | TCCAGGTATAGTCGGTGTTA+TGG | - | chr8.1:13201524-13201543 | None:intergenic | 45.0% |
!! | TCCATAATCTTTGAGACGGG+GGG | - | chr8.1:13202326-13202345 | None:intergenic | 45.0% |
!! | TCTCCACTTGGTGTAAGGTT+TGG | + | chr8.1:13205135-13205154 | MS.gene036870:intron | 45.0% |
!! | TTCCGGTTTGGGTAAGTCTA+AGG | + | chr8.1:13202831-13202850 | MS.gene036870:intron | 45.0% |
!!! | TCTTTCTCTTTTTCAGGGCC+TGG | + | chr8.1:13204996-13205015 | MS.gene036870:intron | 45.0% |
!! | ATATATATAAAAGATATAAT+GGG | - | chr8.1:13204895-13204914 | None:intergenic | 5.0% |
!! | TATATATATAAAAGATATAA+TGG | - | chr8.1:13204896-13204915 | None:intergenic | 5.0% |
!!! | ATAATAAGATAATAATTTTT+CGG | + | chr8.1:13201706-13201725 | MS.gene036870:intron | 5.0% |
!!! | TAAATTTTTTATATTTTTAC+TGG | + | chr8.1:13202632-13202651 | MS.gene036870:intron | 5.0% |
ACATTTGATGCCTGACCTCC+AGG | - | chr8.1:13203894-13203913 | None:intergenic | 50.0% | |
AGAGAGAGCAACGTTTCCCT+TGG | - | chr8.1:13203931-13203950 | None:intergenic | 50.0% | |
AGGAACAGCTACAAGAGGGT+TGG | - | chr8.1:13206124-13206143 | None:intergenic | 50.0% | |
ATCTATCGAGTGTGGGATGC+AGG | + | chr8.1:13205566-13205585 | MS.gene036870:CDS | 50.0% | |
ATTACTGTCGGCATGCAGCT+TGG | + | chr8.1:13206262-13206281 | MS.gene036870:intron | 50.0% | |
CAGACAACACTGACAGCAGA+AGG | - | chr8.1:13206144-13206163 | None:intergenic | 50.0% | |
CTCCTAACGAAGCTTCTAGC+TGG | + | chr8.1:13204648-13204667 | MS.gene036870:CDS | 50.0% | |
CTTGTATGCGCAGGTCATCT+TGG | + | chr8.1:13202924-13202943 | MS.gene036870:intron | 50.0% | |
GAAAAAGCAATCCGAGCCTG+AGG | - | chr8.1:13202224-13202243 | None:intergenic | 50.0% | |
GACCAGCTAGAAGCTTCGTT+AGG | - | chr8.1:13204653-13204672 | None:intergenic | 50.0% | |
GATATTCCTCCGAGGTGGAT+AGG | - | chr8.1:13200700-13200719 | None:intergenic | 50.0% | |
GCAGAAGGAACAGCTACAAG+AGG | - | chr8.1:13206129-13206148 | None:intergenic | 50.0% | |
GCAGCATGTAAAGCAAGGAC+TGG | - | chr8.1:13205483-13205502 | None:intergenic | 50.0% | |
GCTAGAAGCTTCGTTAGGAG+TGG | - | chr8.1:13204648-13204667 | None:intergenic | 50.0% | |
GGGTTTCCTCATGCTGTCTA+TGG | + | chr8.1:13203108-13203127 | MS.gene036870:CDS | 50.0% | |
GTGCTCTAGCTGTGTATTGG+AGG | + | chr8.1:13206290-13206309 | MS.gene036870:CDS | 50.0% | |
TACTGGGCTTGCACATAGGA+GGG | - | chr8.1:13205291-13205310 | None:intergenic | 50.0% | |
TCTGAGTAAGGCATGCCACT+AGG | - | chr8.1:13201143-13201162 | None:intergenic | 50.0% | |
TGCTGTCAGTGTTGTCTGCA+TGG | + | chr8.1:13206146-13206165 | MS.gene036870:CDS | 50.0% | |
TGTATGCGCAGGTCATCTTG+GGG | + | chr8.1:13202926-13202945 | MS.gene036870:intron | 50.0% | |
TGTCAGTGTTGTCTGCATGG+CGG | + | chr8.1:13206149-13206168 | MS.gene036870:CDS | 50.0% | |
TGTTTGCAGAGCTCTGCACT+TGG | + | chr8.1:13206072-13206091 | MS.gene036870:intron | 50.0% | |
TTACTGGGCTTGCACATAGG+AGG | - | chr8.1:13205292-13205311 | None:intergenic | 50.0% | |
! | AGAGGTGGGTTCTCTTGGTA+TGG | - | chr8.1:13205820-13205839 | None:intergenic | 50.0% |
! | CCCATAACACCGACTATACC+TGG | + | chr8.1:13201520-13201539 | MS.gene036870:intron | 50.0% |
! | CTAGTTGGTGTACTGTGCTG+TGG | + | chr8.1:13203760-13203779 | MS.gene036870:intron | 50.0% |
! | GAGGTGGGTTCTCTTGGTAT+GGG | - | chr8.1:13205819-13205838 | None:intergenic | 50.0% |
! | GCGAAATCCGTGGACTGTAA+GGG | + | chr8.1:13203168-13203187 | MS.gene036870:intron | 50.0% |
! | GGAACAAGGGAAGAGTGCAT+TGG | + | chr8.1:13201479-13201498 | MS.gene036870:intron | 50.0% |
! | GGAGATGTTCCTGAAAGTGC+TGG | + | chr8.1:13202761-13202780 | MS.gene036870:CDS | 50.0% |
! | GGAGTGCTCTAGCTGTGTAT+TGG | + | chr8.1:13206287-13206306 | MS.gene036870:CDS | 50.0% |
! | TGCGAAATCCGTGGACTGTA+AGG | + | chr8.1:13203167-13203186 | MS.gene036870:intron | 50.0% |
! | TTTTCAGATCGGGCAAGTCG+CGG | + | chr8.1:13205422-13205441 | MS.gene036870:intron | 50.0% |
!! | AGTCGGTGTTATGGGAAGAG+TGG | - | chr8.1:13201515-13201534 | None:intergenic | 50.0% |
!! | CAGCTGGCTTGTAAATACCG+AGG | - | chr8.1:13202957-13202976 | None:intergenic | 50.0% |
!! | GATGTTCCTGAAAGTGCTGG+GGG | + | chr8.1:13202764-13202783 | MS.gene036870:CDS | 50.0% |
!! | GTGTTTTTGCAGGTGGGTGT+GGG | + | chr8.1:13203256-13203275 | MS.gene036870:intron | 50.0% |
!! | TGTGTTTTTGCAGGTGGGTG+TGG | + | chr8.1:13203255-13203274 | MS.gene036870:intron | 50.0% |
!! | TGTTTTTGCAGGTGGGTGTG+GGG | + | chr8.1:13203257-13203276 | MS.gene036870:intron | 50.0% |
ACATTGGCCCAAGTCGGAAC+CGG | - | chr8.1:13201663-13201682 | None:intergenic | 55.0% | |
CTTTCGGCTCCTCTTGCAAC+TGG | + | chr8.1:13203846-13203865 | MS.gene036870:CDS | 55.0% | |
GAAACTGACGCACGCCATCT+TGG | - | chr8.1:13201047-13201066 | None:intergenic | 55.0% | |
GACGATGTCTGCGAAATCCG+TGG | + | chr8.1:13203158-13203177 | MS.gene036870:CDS | 55.0% | |
GCCCCCCGTCTCAAAGATTA+TGG | + | chr8.1:13202322-13202341 | MS.gene036870:intron | 55.0% | |
GTATGCGCAGGTCATCTTGG+GGG | + | chr8.1:13202927-13202946 | MS.gene036870:intron | 55.0% | |
TTGGTCTCGTGTTGTCCTGG+AGG | + | chr8.1:13203876-13203895 | MS.gene036870:CDS | 55.0% | |
ACTGTCGGCATGCAGCTTGG+TGG | + | chr8.1:13206265-13206284 | MS.gene036870:intron | 60.0% | |
CTCGTGTTGTCCTGGAGGTC+AGG | + | chr8.1:13203881-13203900 | MS.gene036870:CDS | 60.0% | |
CTGTCGGCATGCAGCTTGGT+GGG | + | chr8.1:13206266-13206285 | MS.gene036870:intron | 60.0% | |
GGCGTGCGTCAGTTTCGTGT+TGG | + | chr8.1:13201051-13201070 | MS.gene036870:intron | 60.0% | |
GTCATCTTGGGGGCTCTCCT+CGG | + | chr8.1:13202937-13202956 | MS.gene036870:CDS | 60.0% | |
TGGGCTTGCACATAGGAGGG+TGG | - | chr8.1:13205288-13205307 | None:intergenic | 60.0% | |
TTCAGGCCCCCAGCACTTTC+AGG | - | chr8.1:13202773-13202792 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 13200639 | 13206357 | 13200639 | ID=MS.gene036870 |
chr8.1 | mRNA | 13200639 | 13206357 | 13200639 | ID=MS.gene036870.t1;Parent=MS.gene036870 |
chr8.1 | exon | 13200639 | 13200735 | 13200639 | ID=MS.gene036870.t1.exon1;Parent=MS.gene036870.t1 |
chr8.1 | CDS | 13200639 | 13200735 | 13200639 | ID=cds.MS.gene036870.t1;Parent=MS.gene036870.t1 |
chr8.1 | exon | 13200843 | 13200951 | 13200843 | ID=MS.gene036870.t1.exon2;Parent=MS.gene036870.t1 |
chr8.1 | CDS | 13200843 | 13200951 | 13200843 | ID=cds.MS.gene036870.t1;Parent=MS.gene036870.t1 |
chr8.1 | exon | 13202721 | 13202841 | 13202721 | ID=MS.gene036870.t1.exon3;Parent=MS.gene036870.t1 |
chr8.1 | CDS | 13202721 | 13202841 | 13202721 | ID=cds.MS.gene036870.t1;Parent=MS.gene036870.t1 |
chr8.1 | exon | 13202937 | 13202978 | 13202937 | ID=MS.gene036870.t1.exon4;Parent=MS.gene036870.t1 |
chr8.1 | CDS | 13202937 | 13202978 | 13202937 | ID=cds.MS.gene036870.t1;Parent=MS.gene036870.t1 |
chr8.1 | exon | 13203070 | 13203183 | 13203070 | ID=MS.gene036870.t1.exon5;Parent=MS.gene036870.t1 |
chr8.1 | CDS | 13203070 | 13203183 | 13203070 | ID=cds.MS.gene036870.t1;Parent=MS.gene036870.t1 |
chr8.1 | exon | 13203268 | 13203330 | 13203268 | ID=MS.gene036870.t1.exon6;Parent=MS.gene036870.t1 |
chr8.1 | CDS | 13203268 | 13203330 | 13203268 | ID=cds.MS.gene036870.t1;Parent=MS.gene036870.t1 |
chr8.1 | exon | 13203837 | 13203964 | 13203837 | ID=MS.gene036870.t1.exon7;Parent=MS.gene036870.t1 |
chr8.1 | CDS | 13203837 | 13203964 | 13203837 | ID=cds.MS.gene036870.t1;Parent=MS.gene036870.t1 |
chr8.1 | exon | 13204614 | 13204695 | 13204614 | ID=MS.gene036870.t1.exon8;Parent=MS.gene036870.t1 |
chr8.1 | CDS | 13204614 | 13204695 | 13204614 | ID=cds.MS.gene036870.t1;Parent=MS.gene036870.t1 |
chr8.1 | exon | 13205012 | 13205063 | 13205012 | ID=MS.gene036870.t1.exon9;Parent=MS.gene036870.t1 |
chr8.1 | CDS | 13205012 | 13205063 | 13205012 | ID=cds.MS.gene036870.t1;Parent=MS.gene036870.t1 |
chr8.1 | exon | 13205210 | 13205307 | 13205210 | ID=MS.gene036870.t1.exon10;Parent=MS.gene036870.t1 |
chr8.1 | CDS | 13205210 | 13205307 | 13205210 | ID=cds.MS.gene036870.t1;Parent=MS.gene036870.t1 |
chr8.1 | exon | 13205429 | 13205587 | 13205429 | ID=MS.gene036870.t1.exon11;Parent=MS.gene036870.t1 |
chr8.1 | CDS | 13205429 | 13205587 | 13205429 | ID=cds.MS.gene036870.t1;Parent=MS.gene036870.t1 |
chr8.1 | exon | 13206081 | 13206170 | 13206081 | ID=MS.gene036870.t1.exon12;Parent=MS.gene036870.t1 |
chr8.1 | CDS | 13206081 | 13206170 | 13206081 | ID=cds.MS.gene036870.t1;Parent=MS.gene036870.t1 |
chr8.1 | exon | 13206280 | 13206357 | 13206280 | ID=MS.gene036870.t1.exon13;Parent=MS.gene036870.t1 |
chr8.1 | CDS | 13206280 | 13206357 | 13206280 | ID=cds.MS.gene036870.t1;Parent=MS.gene036870.t1 |
Gene Sequence |
Protein sequence |