Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038709.t1 | KEH32099.1 | 63.2 | 562 | 60 | 4 | 1 | 549 | 1 | 428 | 1.50E-78 | 303.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038709.t1 | Q9DED4 | 38.0 | 79 | 48 | 1 | 3 | 80 | 1 | 79 | 2.6e-10 | 68.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038709.t1 | A0A072UQJ0 | 63.2 | 562 | 60 | 4 | 1 | 549 | 1 | 428 | 1.1e-78 | 303.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene43051 | MS.gene038709 | PPI |
| MS.gene050322 | MS.gene038709 | PPI |
| MS.gene007227 | MS.gene038709 | PPI |
| MS.gene038709 | MS.gene84339 | PPI |
| MS.gene35396 | MS.gene038709 | PPI |
| MS.gene034468 | MS.gene038709 | PPI |
| MS.gene66767 | MS.gene038709 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038709.t1 | MTR_4g113150 | 91.725 | 568 | 21 | 5 | 1 | 549 | 1 | 561 | 0.0 | 841 |
| MS.gene038709.t1 | MTR_4g113150 | 93.033 | 244 | 11 | 3 | 306 | 549 | 191 | 428 | 2.18e-137 | 405 |
| MS.gene038709.t1 | MTR_4g113150 | 83.665 | 251 | 21 | 4 | 1 | 238 | 1 | 244 | 9.14e-110 | 334 |
| MS.gene038709.t1 | MTR_5g070100 | 32.911 | 79 | 52 | 1 | 5 | 82 | 34 | 112 | 1.90e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038709.t1 | AT5G19960 | 42.487 | 193 | 66 | 5 | 1 | 184 | 1 | 157 | 9.55e-33 | 128 |
| MS.gene038709.t1 | AT5G19960 | 40.517 | 116 | 67 | 1 | 425 | 540 | 221 | 334 | 4.65e-15 | 77.0 |
| MS.gene038709.t1 | AT5G19960 | 40.517 | 116 | 67 | 1 | 425 | 540 | 133 | 246 | 2.31e-15 | 76.6 |
| MS.gene038709.t1 | AT4G39260 | 42.857 | 84 | 47 | 1 | 9 | 91 | 8 | 91 | 6.17e-15 | 70.9 |
| MS.gene038709.t1 | AT3G47120 | 39.474 | 76 | 45 | 1 | 5 | 79 | 34 | 109 | 3.38e-13 | 70.9 |
| MS.gene038709.t1 | AT3G47120 | 39.474 | 76 | 45 | 1 | 5 | 79 | 34 | 109 | 5.40e-13 | 70.9 |
Find 141 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCGTGTGGTTAAAGTTAA+TGG | 0.201362 | 8.4:+15338654 | MS.gene038709:CDS |
| GTTATGAATCAGACTATTAA+TGG | 0.247320 | 8.4:+15338633 | MS.gene038709:intron |
| GGTGGTGGCAGATCAAATTT+TGG | 0.252328 | 8.4:+15338708 | MS.gene038709:CDS |
| CGCACTGTCTTCAATTTGTA+TGG | 0.310277 | 8.4:+15338242 | MS.gene038709:CDS |
| GGGAAGACCACCAACGTAAA+TGG | 0.322442 | 8.4:-15338195 | None:intergenic |
| GGTGGAGGTGGCGGTGGTGG+TGG | 0.340367 | 8.4:+15338693 | MS.gene038709:CDS |
| GGCGGTGGAGGTGGCGGTGG+TGG | 0.354294 | 8.4:+15338690 | MS.gene038709:CDS |
| CCCTATCCCTGTCACGGTCT+CGG | 0.354327 | 8.4:-15339040 | None:intergenic |
| CATTACCATGATCATAATCT+TGG | 0.358631 | 8.4:-15338815 | None:intergenic |
| CCCTATCCCTATCATGGTCT+CGG | 0.372822 | 8.4:-15339133 | None:intergenic |
| GTGAGGTCTCGTGGCGGTGG+AGG | 0.372910 | 8.4:+15338678 | MS.gene038709:CDS |
| ATTGGAATCATGACGGTGAT+AGG | 0.374936 | 8.4:+15339501 | MS.gene038709:CDS |
| TCCTATCTCTGTCACGGTCT+CGG | 0.379142 | 8.4:-15339319 | None:intergenic |
| ATAGGTCTCGAGACCATGAT+AGG | 0.390177 | 8.4:+15338940 | MS.gene038709:CDS |
| CCCTGTCACGGTCACGGTCT+CGG | 0.400331 | 8.4:-15339226 | None:intergenic |
| CTTACAAATGGAAGTCTAGA+TGG | 0.403989 | 8.4:+15341721 | MS.gene038709:CDS |
| AGGTCTCGTGGCGGTGGAGG+TGG | 0.410261 | 8.4:+15338681 | MS.gene038709:CDS |
| ATGATGAAAGGAATGGAGAT+TGG | 0.413487 | 8.4:+15338760 | MS.gene038709:CDS |
| CCTGTCACGGTCACGGTCTC+GGG | 0.417238 | 8.4:-15339225 | None:intergenic |
| ATAGATCCCGAGACCATGAT+AGG | 0.418281 | 8.4:+15339126 | MS.gene038709:CDS |
| GCCGTGTGGTTAAAGTTAAT+GGG | 0.420536 | 8.4:+15338655 | MS.gene038709:CDS |
| AAAGCGCGTTAGACCGTGAT+AGG | 0.422370 | 8.4:+15339201 | MS.gene038709:CDS |
| ATAGGTCCCGCGACCGTGAT+AGG | 0.424503 | 8.4:+15338922 | MS.gene038709:CDS |
| CGTGGCGGTGGAGGTGGCGG+TGG | 0.426158 | 8.4:+15338687 | MS.gene038709:CDS |
| AGAAAGAAGACTTAATGTTA+TGG | 0.428868 | 8.4:+15340357 | MS.gene038709:CDS |
| AAAGCATGTTAGATGATGAT+TGG | 0.430802 | 8.4:+15339483 | MS.gene038709:CDS |
| CCCGAGACCGTGACCGTGAC+AGG | 0.432306 | 8.4:+15339225 | MS.gene038709:CDS |
| TTCTAAGCTGGAAGAGGGAT+TGG | 0.434291 | 8.4:+15340333 | MS.gene038709:CDS |
| TTCTATCCCTATCCCTATCA+TGG | 0.434809 | 8.4:-15338953 | None:intergenic |
| TCTCGTGGCGGTGGAGGTGG+CGG | 0.438886 | 8.4:+15338684 | MS.gene038709:CDS |
| CCTATCCCTGTCACGGTCTC+GGG | 0.441091 | 8.4:-15339039 | None:intergenic |
| CAAGCTAGAGCAAGTATGTT+AGG | 0.441748 | 8.4:+15339098 | MS.gene038709:CDS |
| GGTGATGGTGATGGTGGTCT+TGG | 0.448887 | 8.4:+15341694 | MS.gene038709:CDS |
| TTACATTGGTCAACTGCATC+TGG | 0.451013 | 8.4:-15340564 | None:intergenic |
| ATCAATGACCAACGTACACT+TGG | 0.451190 | 8.4:+15338426 | MS.gene038709:CDS |
| CCTATCTCTGTCACGGTCTC+GGG | 0.453975 | 8.4:-15339318 | None:intergenic |
| AAAGCATGTTAGTCCGTGAT+AGG | 0.455542 | 8.4:+15339015 | MS.gene038709:CDS |
| AACCATGATGTCACGGTCTC+GGG | 0.456700 | 8.4:-15339411 | None:intergenic |
| GGGGTGAGGTCTCGTGGCGG+TGG | 0.457192 | 8.4:+15338675 | MS.gene038709:CDS |
| GGAGTTACAAAAGCACTCTA+AGG | 0.459318 | 8.4:+15340378 | MS.gene038709:CDS |
| GAGACCGTGACATCATGGTT+AGG | 0.463473 | 8.4:+15339414 | MS.gene038709:CDS |
| TGATAGGGCTGAAAATGAAC+TGG | 0.463823 | 8.4:+15339517 | MS.gene038709:CDS |
| TGATGAAAGGAATGGAGATT+GGG | 0.465545 | 8.4:+15338761 | MS.gene038709:CDS |
| CTCATCATTGTGGTCCCCAT+TGG | 0.467282 | 8.4:-15339817 | None:intergenic |
| CCCGAGACCGTGACAGAGAT+AGG | 0.470681 | 8.4:+15339318 | MS.gene038709:CDS |
| CGAGACCAAGATTATGATCA+TGG | 0.478575 | 8.4:+15338810 | MS.gene038709:CDS |
| AGAGATCTCGAGACCGTGAT+AGG | 0.480387 | 8.4:+15338904 | MS.gene038709:CDS |
| GTAATGAGAAAGATGGATAC+AGG | 0.480470 | 8.4:+15338832 | MS.gene038709:CDS |
| AAAGATGGATACAGGAATAG+AGG | 0.481913 | 8.4:+15338840 | MS.gene038709:CDS |
| ACAGGAATAGAGGCAGTGAT+TGG | 0.482052 | 8.4:+15338850 | MS.gene038709:CDS |
| ATAGTCCATCAGATTCCAAT+GGG | 0.482340 | 8.4:+15339802 | MS.gene038709:CDS |
| TTCTATCCCTATCCCTATCA+TGG | 0.483071 | 8.4:-15339139 | None:intergenic |
| CCCGAGACCGTGACAGGGAT+AGG | 0.483596 | 8.4:+15339039 | MS.gene038709:CDS |
| TGTTTCATCAGTGGCGTCGA+AGG | 0.487655 | 8.4:-15338216 | None:intergenic |
| ACTGGAAAACAGCAGGGTAC+AGG | 0.494266 | 8.4:+15339535 | MS.gene038709:CDS |
| ATAGGTCCCGAGACCGTGAC+AGG | 0.495188 | 8.4:+15339033 | MS.gene038709:CDS |
| TCGAGTCCAATCACCACCTC+TGG | 0.499545 | 8.4:-15338874 | None:intergenic |
| ATTGGACCAGAGGTGGTGAT+TGG | 0.502244 | 8.4:+15338868 | MS.gene038709:CDS |
| TAACCATGATGTCACGGTCT+CGG | 0.507957 | 8.4:-15339412 | None:intergenic |
| GGTCTTGGACAACTTACAAA+TGG | 0.508402 | 8.4:+15341709 | MS.gene038709:CDS |
| ACAGGGTGGAGATGTGGATA+AGG | 0.508614 | 8.4:+15339553 | MS.gene038709:CDS |
| CCTATCCCTATCATGGTCTC+GGG | 0.509297 | 8.4:-15339132 | None:intergenic |
| AGACCGTGACATCATGGTTA+GGG | 0.509461 | 8.4:+15339415 | MS.gene038709:CDS |
| CATCATAATGATGAAAGGAA+TGG | 0.517662 | 8.4:+15338753 | MS.gene038709:CDS |
| CCCGAGACCATGATAGGGAT+AGG | 0.517941 | 8.4:+15339132 | MS.gene038709:CDS |
| CACGGTCTCGGGACCTATCA+CGG | 0.518091 | 8.4:-15339214 | None:intergenic |
| AAAATGAACTGGAAAACAGC+AGG | 0.521165 | 8.4:+15339528 | MS.gene038709:CDS |
| CTCGAGACCATGATAGGGAT+AGG | 0.523344 | 8.4:+15338946 | MS.gene038709:CDS |
| TTGTAACTTTCACAAACCCT+AGG | 0.525397 | 8.4:+15338463 | MS.gene038709:CDS |
| TAGCATCAATTGCAGACCTA+GGG | 0.528965 | 8.4:-15338479 | None:intergenic |
| CACGGTCTCGGGACCTATCA+CGG | 0.531377 | 8.4:-15339028 | None:intergenic |
| GATAGCTCCATTTACGTTGG+TGG | 0.531498 | 8.4:+15338188 | MS.gene038709:CDS |
| GATCATGGTAATGAGAAAGA+TGG | 0.531558 | 8.4:+15338825 | MS.gene038709:CDS |
| CTGGATCCACATCTAAGTTA+CGG | 0.535060 | 8.4:-15339577 | None:intergenic |
| TCAGGTTTCTAAGCTGGAAG+AGG | 0.536137 | 8.4:+15340327 | MS.gene038709:intron |
| CCGAGACCGTGACAGGGATA+GGG | 0.537071 | 8.4:+15339040 | MS.gene038709:CDS |
| CACGGTCGCGGGACCTATCA+CGG | 0.541776 | 8.4:-15338917 | None:intergenic |
| CTCGAGACCTATCACGGTCG+CGG | 0.542402 | 8.4:-15338929 | None:intergenic |
| CTGGAAAACAGCAGGGTACA+GGG | 0.545302 | 8.4:+15339536 | MS.gene038709:CDS |
| CAGGTTTCTAAGCTGGAAGA+GGG | 0.546464 | 8.4:+15340328 | MS.gene038709:intron |
| AGAAGAGTTGAGCATTTGCA+AGG | 0.546715 | 8.4:+15339344 | MS.gene038709:CDS |
| GTCCCGAGACCGTGACATCA+TGG | 0.550463 | 8.4:+15339409 | MS.gene038709:CDS |
| ATAGCATCAATTGCAGACCT+AGG | 0.550720 | 8.4:-15338480 | None:intergenic |
| GACTACCTTGACATCAAGAA+TGG | 0.552219 | 8.4:-15338267 | None:intergenic |
| TTATACCCCTGTCACGGTCA+CGG | 0.557856 | 8.4:-15339232 | None:intergenic |
| CCGAGACCATGATAGGGATA+GGG | 0.559495 | 8.4:+15339133 | MS.gene038709:CDS |
| CCCCATTAACTTTAACCACA+CGG | 0.561289 | 8.4:-15338656 | None:intergenic |
| GAGCATATGCAAAATTATGA+TGG | 0.562214 | 8.4:+15338981 | MS.gene038709:CDS |
| CAGGGTACAGGGTGGAGATG+TGG | 0.563252 | 8.4:+15339547 | MS.gene038709:CDS |
| GAAAGCATGTTAGATCGTGA+TGG | 0.563810 | 8.4:+15339293 | MS.gene038709:CDS |
| AAAGCATGTTAGACCGCGAT+GGG | 0.565934 | 8.4:+15339387 | MS.gene038709:CDS |
| TTCTATCCCTATCCCTGTCA+CGG | 0.566463 | 8.4:-15339046 | None:intergenic |
| GAACACATGCTAGATTATGA+TGG | 0.568841 | 8.4:+15339074 | MS.gene038709:CDS |
| TGGTCCCCATTGGAATCTGA+TGG | 0.575643 | 8.4:-15339807 | None:intergenic |
| GTTTCATCAGTGGCGTCGAA+GGG | 0.576277 | 8.4:-15338215 | None:intergenic |
| TGGTTAAAGTTAATGGGGTG+AGG | 0.576628 | 8.4:+15338661 | MS.gene038709:CDS |
| TCTTACTCGATGTTTCTCCT+CGG | 0.578233 | 8.4:-15339662 | None:intergenic |
| ATTATCATCATAATGATGAA+AGG | 0.578991 | 8.4:+15338748 | MS.gene038709:CDS |
| AATAGTCCATCAGATTCCAA+TGG | 0.582473 | 8.4:+15339801 | MS.gene038709:CDS |
| AGGAATGGAGATTGGGATCG+TGG | 0.582856 | 8.4:+15338768 | MS.gene038709:CDS |
| TCGAGACCATGATAGGGATA+GGG | 0.583018 | 8.4:+15338947 | MS.gene038709:CDS |
| GAAAGCATGTTAGACCGCGA+TGG | 0.583363 | 8.4:+15339386 | MS.gene038709:CDS |
| TTCTACTCCTATCTCTGTCA+CGG | 0.583559 | 8.4:-15339325 | None:intergenic |
| TGGCGCCATTCTTGATGTCA+AGG | 0.589109 | 8.4:+15338262 | MS.gene038709:CDS |
| CATGGTCTCGAGACCTATCA+CGG | 0.589442 | 8.4:-15338935 | None:intergenic |
| GTTAATGGGGTGAGGTCTCG+TGG | 0.592393 | 8.4:+15338669 | MS.gene038709:CDS |
| TTGGAATCATGACGGTGATA+GGG | 0.593640 | 8.4:+15339502 | MS.gene038709:CDS |
| TCGAGACCTATCACGGTCGC+GGG | 0.594735 | 8.4:-15338928 | None:intergenic |
| GGCAGTGATTGGACCAGAGG+TGG | 0.596616 | 8.4:+15338861 | MS.gene038709:CDS |
| CCGAGACCGTGACCGTGACA+GGG | 0.596911 | 8.4:+15339226 | MS.gene038709:CDS |
| AAAGCATGTTAGATCGTGAT+GGG | 0.597103 | 8.4:+15339294 | MS.gene038709:CDS |
| GAGAGTGACGGTGATGGTGA+TGG | 0.598421 | 8.4:+15341685 | MS.gene038709:CDS |
| TCAATGACCAACGTACACTT+GGG | 0.603480 | 8.4:+15338427 | MS.gene038709:CDS |
| TCAATATTGTTCGAGAGTGA+CGG | 0.605658 | 8.4:+15341673 | MS.gene038709:CDS |
| TAGATCCCGAGACCATGATA+GGG | 0.613104 | 8.4:+15339127 | MS.gene038709:CDS |
| AGTGCGAATTGTTTCATCAG+TGG | 0.616718 | 8.4:-15338225 | None:intergenic |
| TAAGGACCGTAACTTAGATG+TGG | 0.622168 | 8.4:+15339571 | MS.gene038709:CDS |
| TCAGTTCCACAAAATGACAC+TGG | 0.624699 | 8.4:+15338160 | None:intergenic |
| AGAGGCAGTGATTGGACCAG+AGG | 0.630012 | 8.4:+15338858 | MS.gene038709:CDS |
| AGCATTTCCCAAGTGTACGT+TGG | 0.632194 | 8.4:-15338434 | None:intergenic |
| GATGCTATCAACGATATGAA+CGG | 0.633466 | 8.4:+15338495 | MS.gene038709:CDS |
| TATCCCTAACCATGATGTCA+CGG | 0.634194 | 8.4:-15339418 | None:intergenic |
| ATCACATTACCTCATCATTG+TGG | 0.638871 | 8.4:-15339827 | None:intergenic |
| TAGGTCTCGAGACCATGATA+GGG | 0.644021 | 8.4:+15338941 | MS.gene038709:CDS |
| CACGGTCTCGGGACCCATCG+CGG | 0.649874 | 8.4:-15339400 | None:intergenic |
| AGTGACGGTGATGGTGATGG+TGG | 0.650592 | 8.4:+15341688 | MS.gene038709:CDS |
| GATGATAGCTCCATTTACGT+TGG | 0.659955 | 8.4:+15338185 | MS.gene038709:CDS |
| AGGTAGAAGATGAATTAGAG+AGG | 0.662402 | 8.4:+15339984 | MS.gene038709:intron |
| CGAGACCGTGACCGTGACAG+GGG | 0.664208 | 8.4:+15339227 | MS.gene038709:CDS |
| CAATGGGGACCACAATGATG+AGG | 0.667084 | 8.4:+15339818 | MS.gene038709:CDS |
| TTGTTCGAGAGTGACGGTGA+TGG | 0.673128 | 8.4:+15341679 | MS.gene038709:CDS |
| AAATGAACTGGAAAACAGCA+GGG | 0.689851 | 8.4:+15339529 | MS.gene038709:CDS |
| ATATTTACCGCAGAAACGGG+AGG | 0.695680 | 8.4:+15340504 | MS.gene038709:intron |
| AATGGGGTGAGGTCTCGTGG+CGG | 0.699964 | 8.4:+15338672 | MS.gene038709:CDS |
| GATGATGATTGGAATCATGA+CGG | 0.709264 | 8.4:+15339494 | MS.gene038709:CDS |
| TAGGTCCCGAGACCGTGACA+GGG | 0.714552 | 8.4:+15339034 | MS.gene038709:CDS |
| CCGTGTGGTTAAAGTTAATG+GGG | 0.715692 | 8.4:+15338656 | MS.gene038709:CDS |
| TCAGACTATTAATGGCCGTG+TGG | 0.721965 | 8.4:+15338641 | MS.gene038709:intron |
| AATGGAGATTGGGATCGTGG+CGG | 0.727702 | 8.4:+15338771 | MS.gene038709:CDS |
| GAAAACAGCAGGGTACAGGG+TGG | 0.744053 | 8.4:+15339539 | MS.gene038709:CDS |
| TAGTCCATCAGATTCCAATG+GGG | 0.775487 | 8.4:+15339803 | MS.gene038709:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAATTAAATAATTAACA+AGG | - | chr8.4:15338330-15338349 | None:intergenic | 10.0% |
| !! | AGAAATTAAATAATTAACAA+GGG | - | chr8.4:15338329-15338348 | None:intergenic | 10.0% |
| !! | AAACTAAAATGAATGAATAA+TGG | + | chr8.4:15340056-15340075 | MS.gene038709:intron | 15.0% |
| !! | AATAATCAATTCAAGTAATT+GGG | + | chr8.4:15338355-15338374 | MS.gene038709:intron | 15.0% |
| !! | TAATAATCAATTCAAGTAAT+TGG | + | chr8.4:15338354-15338373 | MS.gene038709:intron | 15.0% |
| !! | TTATCAAACATTCAAATATT+GGG | - | chr8.4:15340191-15340210 | None:intergenic | 15.0% |
| !! | TTTATCAAACATTCAAATAT+TGG | - | chr8.4:15340192-15340211 | None:intergenic | 15.0% |
| !!! | AAAATATAACTTTTTGGAAA+AGG | - | chr8.4:15341050-15341069 | None:intergenic | 15.0% |
| !!! | AAATATAACTTTTTGGAAAA+GGG | - | chr8.4:15341049-15341068 | None:intergenic | 15.0% |
| !! | AAACATTGCTTAAAATAATG+TGG | - | chr8.4:15341263-15341282 | None:intergenic | 20.0% |
| !! | AATGTTTAAATTTCACAATG+TGG | + | chr8.4:15340804-15340823 | MS.gene038709:intron | 20.0% |
| !! | AGTTTATTTGTGTTAATGTT+TGG | + | chr8.4:15338556-15338575 | MS.gene038709:intron | 20.0% |
| !! | ATTATCATCATAATGATGAA+AGG | + | chr8.4:15338748-15338767 | MS.gene038709:CDS | 20.0% |
| !! | TAAACATTATAAAAAGTCAC+AGG | - | chr8.4:15340792-15340811 | None:intergenic | 20.0% |
| !! | TAAATGATATTGCTAACATT+GGG | + | chr8.4:15340624-15340643 | MS.gene038709:intron | 20.0% |
| !! | TTAAAACTTAGACATTACAT+TGG | - | chr8.4:15340581-15340600 | None:intergenic | 20.0% |
| !!! | AATATAACTTTTTGGAAAAG+GGG | - | chr8.4:15341048-15341067 | None:intergenic | 20.0% |
| !!! | ATAATGGAAATTTGTCAATA+TGG | + | chr8.4:15340072-15340091 | MS.gene038709:intron | 20.0% |
| !!! | TTGATTTTCTAATCATTCAT+AGG | - | chr8.4:15341238-15341257 | None:intergenic | 20.0% |
| ! | AAGAAAAACAAGAAATAAGC+TGG | - | chr8.4:15341575-15341594 | None:intergenic | 25.0% |
| ! | AGAAAGAAGACTTAATGTTA+TGG | + | chr8.4:15340357-15340376 | MS.gene038709:CDS | 25.0% |
| ! | ATATATATAAGACACAAACC+TGG | - | chr8.4:15340735-15340754 | None:intergenic | 25.0% |
| ! | ATGTCACAGAAAATTAACAT+TGG | - | chr8.4:15339691-15339710 | None:intergenic | 25.0% |
| ! | ATTAATTAAGCTCCATAAAG+GGG | + | chr8.4:15341285-15341304 | MS.gene038709:intron | 25.0% |
| ! | CATTAATTAAGCTCCATAAA+GGG | + | chr8.4:15341284-15341303 | MS.gene038709:intron | 25.0% |
| ! | GACGATATAGAATCATTATA+TGG | + | chr8.4:15340961-15340980 | MS.gene038709:intron | 25.0% |
| ! | GTAAATGATATTGCTAACAT+TGG | + | chr8.4:15340623-15340642 | MS.gene038709:intron | 25.0% |
| ! | GTTATGAATCAGACTATTAA+TGG | + | chr8.4:15338633-15338652 | MS.gene038709:intron | 25.0% |
| ! | TAATTTCAGAGATATTTCCA+TGG | - | chr8.4:15341073-15341092 | None:intergenic | 25.0% |
| ! | TATATCGTCAACATAATTCA+AGG | - | chr8.4:15340950-15340969 | None:intergenic | 25.0% |
| !! | ATCATAATTTTGCATATGCT+CGG | - | chr8.4:15338982-15339001 | None:intergenic | 25.0% |
| !! | ATGTTTGGTAATTATTGTTG+TGG | + | chr8.4:15338571-15338590 | MS.gene038709:intron | 25.0% |
| !! | CCAAAAAGTTATATTTTCCA+TGG | + | chr8.4:15341053-15341072 | MS.gene038709:intron | 25.0% |
| !! | CCATGGAAAATATAACTTTT+TGG | - | chr8.4:15341056-15341075 | None:intergenic | 25.0% |
| !! | TATGCTGAGTTAATTTTTGT+TGG | + | chr8.4:15341631-15341650 | MS.gene038709:intron | 25.0% |
| !!! | TTTTATTTTAGACCCCTTTA+TGG | - | chr8.4:15341300-15341319 | None:intergenic | 25.0% |
| AAACCAATACCATATTCACA+AGG | - | chr8.4:15341509-15341528 | None:intergenic | 30.0% | |
| AAAGCATGTTAGATGATGAT+TGG | + | chr8.4:15339483-15339502 | MS.gene038709:CDS | 30.0% | |
| AACATAAAAAAGAACAACCG+AGG | + | chr8.4:15339645-15339664 | MS.gene038709:CDS | 30.0% | |
| ACTGCTTGATCAACTAAAAA+AGG | + | chr8.4:15340015-15340034 | MS.gene038709:CDS | 30.0% | |
| AGATTATGGTGGCAAAAAAT+TGG | + | chr8.4:15341334-15341353 | MS.gene038709:intron | 30.0% | |
| ATATTCATCTGATTCCAACA+AGG | + | chr8.4:15340236-15340255 | MS.gene038709:intron | 30.0% | |
| ATGCTTGGAAATAAATGAGA+AGG | - | chr8.4:15340406-15340425 | None:intergenic | 30.0% | |
| CAAGAAATAAGCTGGATTAT+AGG | - | chr8.4:15341567-15341586 | None:intergenic | 30.0% | |
| CAATCTCAAAATTTGATGCT+TGG | - | chr8.4:15340421-15340440 | None:intergenic | 30.0% | |
| CATCATAATGATGAAAGGAA+TGG | + | chr8.4:15338753-15338772 | MS.gene038709:CDS | 30.0% | |
| CATTACCATGATCATAATCT+TGG | - | chr8.4:15338818-15338837 | None:intergenic | 30.0% | |
| CCATTAATTAAGCTCCATAA+AGG | + | chr8.4:15341283-15341302 | MS.gene038709:intron | 30.0% | |
| CCTTTATGGAGCTTAATTAA+TGG | - | chr8.4:15341286-15341305 | None:intergenic | 30.0% | |
| GAAAATCAATTGCATGTCAT+TGG | - | chr8.4:15341163-15341182 | None:intergenic | 30.0% | |
| GAAATGCAAAAGTAGCTATT+AGG | + | chr8.4:15341391-15341410 | MS.gene038709:intron | 30.0% | |
| GAATGTTTGATAAATGCGTT+AGG | + | chr8.4:15340198-15340217 | MS.gene038709:intron | 30.0% | |
| GAGCATATGCAAAATTATGA+TGG | + | chr8.4:15338981-15339000 | MS.gene038709:CDS | 30.0% | |
| GTTAATTTCCAACTGTTCTT+TGG | + | chr8.4:15339713-15339732 | MS.gene038709:intron | 30.0% | |
| TAAATTTCACAATGTGGCTT+AGG | + | chr8.4:15340810-15340829 | MS.gene038709:intron | 30.0% | |
| TAAGTAAACCAAAGAACAGT+TGG | - | chr8.4:15339724-15339743 | None:intergenic | 30.0% | |
| TATTCATCTGATTCCAACAA+GGG | + | chr8.4:15340237-15340256 | MS.gene038709:intron | 30.0% | |
| ! | AAGTGAATTCCTTGTTATCA+AGG | + | chr8.4:15341414-15341433 | MS.gene038709:intron | 30.0% |
| ! | ATTCCTTGTTATCAAGGAAA+TGG | + | chr8.4:15341420-15341439 | MS.gene038709:intron | 30.0% |
| ! | GGTTATGATTTGAGAGTTTT+TGG | + | chr8.4:15338597-15338616 | MS.gene038709:intron | 30.0% |
| ! | TGTTCGTCAAAACTTTTATC+AGG | - | chr8.4:15339629-15339648 | None:intergenic | 30.0% |
| ! | TTGATTTGACCTTGTGAATA+TGG | + | chr8.4:15341497-15341516 | MS.gene038709:intron | 30.0% |
| ! | TTTTCTCCTCTTTTATGTGT+TGG | + | chr8.4:15340281-15340300 | MS.gene038709:intron | 30.0% |
| !! | TTCTCTTTAAAGTGTTAGCA+CGG | + | chr8.4:15341120-15341139 | MS.gene038709:intron | 30.0% |
| !! | TTGTGAATATGGTATTGGTT+TGG | + | chr8.4:15341508-15341527 | MS.gene038709:intron | 30.0% |
| !!! | CTTGTTTTTACTTGCTTTTG+TGG | + | chr8.4:15339956-15339975 | MS.gene038709:intron | 30.0% |
| !!! | GTTAATTTTTGTTGGTTTGC+AGG | + | chr8.4:15341639-15341658 | MS.gene038709:intron | 30.0% |
| !!! | TTTTTTGCCACCATAATCTA+TGG | - | chr8.4:15341333-15341352 | None:intergenic | 30.0% |
| AAAATGAACTGGAAAACAGC+AGG | + | chr8.4:15339528-15339547 | MS.gene038709:CDS | 35.0% | |
| AAAGATGGATACAGGAATAG+AGG | + | chr8.4:15338840-15338859 | MS.gene038709:CDS | 35.0% | |
| AAAGCATGTTAGATCGTGAT+GGG | + | chr8.4:15339294-15339313 | MS.gene038709:CDS | 35.0% | |
| AAATGAACTGGAAAACAGCA+GGG | + | chr8.4:15339529-15339548 | MS.gene038709:CDS | 35.0% | |
| AAGATATTTACCGCAGAAAC+GGG | + | chr8.4:15340501-15340520 | MS.gene038709:intron | 35.0% | |
| AATAGTCCATCAGATTCCAA+TGG | + | chr8.4:15339801-15339820 | MS.gene038709:CDS | 35.0% | |
| AGAGATCTTTCAAATCTCAG+GGG | - | chr8.4:15341459-15341478 | None:intergenic | 35.0% | |
| AGGTAGAAGATGAATTAGAG+AGG | + | chr8.4:15339984-15340003 | MS.gene038709:intron | 35.0% | |
| ATAGTCCATCAGATTCCAAT+GGG | + | chr8.4:15339802-15339821 | MS.gene038709:CDS | 35.0% | |
| ATATTGCTAACATTGGGCTT+GGG | + | chr8.4:15340630-15340649 | MS.gene038709:intron | 35.0% | |
| ATCACATTACCTCATCATTG+TGG | - | chr8.4:15339830-15339849 | None:intergenic | 35.0% | |
| ATCCAGACAAAAAGATGGAT+AGG | + | chr8.4:15339594-15339613 | MS.gene038709:CDS | 35.0% | |
| ATGATGAAAGGAATGGAGAT+TGG | + | chr8.4:15338760-15338779 | MS.gene038709:CDS | 35.0% | |
| ATTCAAACTGCAGGAAAATC+AGG | - | chr8.4:15339769-15339788 | None:intergenic | 35.0% | |
| ATTTGTCACATTCAAACTGC+AGG | - | chr8.4:15339778-15339797 | None:intergenic | 35.0% | |
| CAGAGATCTTTCAAATCTCA+GGG | - | chr8.4:15341460-15341479 | None:intergenic | 35.0% | |
| CCATAATCTATGGCATAAGA+TGG | - | chr8.4:15341323-15341342 | None:intergenic | 35.0% | |
| CCATCTTATGCCATAGATTA+TGG | + | chr8.4:15341320-15341339 | MS.gene038709:intron | 35.0% | |
| CTTACAAATGGAAGTCTAGA+TGG | + | chr8.4:15341721-15341740 | MS.gene038709:CDS | 35.0% | |
| GAACACATGCTAGATTATGA+TGG | + | chr8.4:15339074-15339093 | MS.gene038709:CDS | 35.0% | |
| GAAGATATTTACCGCAGAAA+CGG | + | chr8.4:15340500-15340519 | MS.gene038709:intron | 35.0% | |
| GAGATTTGAAAGATCTCTGA+TGG | + | chr8.4:15341461-15341480 | MS.gene038709:intron | 35.0% | |
| GATGATGATTGGAATCATGA+CGG | + | chr8.4:15339494-15339513 | MS.gene038709:CDS | 35.0% | |
| GATGCTATCAACGATATGAA+CGG | + | chr8.4:15338495-15338514 | MS.gene038709:CDS | 35.0% | |
| GCTTGATCAACTAAAAAAGG+AGG | + | chr8.4:15340018-15340037 | MS.gene038709:CDS | 35.0% | |
| GTAATGAGAAAGATGGATAC+AGG | + | chr8.4:15338832-15338851 | MS.gene038709:CDS | 35.0% | |
| TCAATATTGTTCGAGAGTGA+CGG | + | chr8.4:15341673-15341692 | MS.gene038709:CDS | 35.0% | |
| TCAGAGATCTTTCAAATCTC+AGG | - | chr8.4:15341461-15341480 | None:intergenic | 35.0% | |
| TCTGAACATGTGCATTTCAA+AGG | + | chr8.4:15340162-15340181 | MS.gene038709:intron | 35.0% | |
| TCTTATGCCATAGATTATGG+TGG | + | chr8.4:15341323-15341342 | MS.gene038709:intron | 35.0% | |
| TGACCTTGTGAATATGGTAT+TGG | + | chr8.4:15341503-15341522 | MS.gene038709:intron | 35.0% | |
| TGATGAAAGGAATGGAGATT+GGG | + | chr8.4:15338761-15338780 | MS.gene038709:CDS | 35.0% | |
| TGTGTTCAAAGTAAGGATGT+TGG | - | chr8.4:15340456-15340475 | None:intergenic | 35.0% | |
| TTAAAGATTAGAGCCCTTGT+TGG | - | chr8.4:15340253-15340272 | None:intergenic | 35.0% | |
| TTGTAACTTTCACAAACCCT+AGG | + | chr8.4:15338463-15338482 | MS.gene038709:CDS | 35.0% | |
| ! | AAATAAACCGAGACTGATTC+TGG | + | chr8.4:15339922-15339941 | MS.gene038709:intron | 35.0% |
| ! | ATCCTATCCATCTTTTTGTC+TGG | - | chr8.4:15339599-15339618 | None:intergenic | 35.0% |
| ! | ATTTTGTCAGGTTTCTAAGC+TGG | + | chr8.4:15340321-15340340 | MS.gene038709:intron | 35.0% |
| ! | CAGCTTTTGTGTTCAAAGTA+AGG | - | chr8.4:15340463-15340482 | None:intergenic | 35.0% |
| ! | CTGAAAAGTGGAATTTTGTC+AGG | + | chr8.4:15340309-15340328 | MS.gene038709:intron | 35.0% |
| ! | GAAAATTCTCTGCAGTTTTG+TGG | + | chr8.4:15340877-15340896 | MS.gene038709:intron | 35.0% |
| ! | GATCATGGTAATGAGAAAGA+TGG | + | chr8.4:15338825-15338844 | MS.gene038709:CDS | 35.0% |
| !! | CGTATTTACTTAACTTGTGC+TGG | + | chr8.4:15341603-15341622 | MS.gene038709:intron | 35.0% |
| !! | TCTCTTTAAAGTGTTAGCAC+GGG | + | chr8.4:15341121-15341140 | MS.gene038709:intron | 35.0% |
| !!! | ACTGGTTTTAAGTCTTTCTG+TGG | - | chr8.4:15340701-15340720 | None:intergenic | 35.0% |
| AAAGCATGTTAGTCCGTGAT+AGG | + | chr8.4:15339015-15339034 | MS.gene038709:CDS | 40.0% | |
| AAATGTGCCAGAATCAGTCT+CGG | - | chr8.4:15339932-15339951 | None:intergenic | 40.0% | |
| AACCAGTGAAAAAGAACTCC+AGG | + | chr8.4:15340714-15340733 | MS.gene038709:CDS | 40.0% | |
| ACTTATGCGCGAAGTTGTAA+TGG | + | chr8.4:15341369-15341388 | MS.gene038709:intron | 40.0% | |
| AGAAAACATTCATGCAGCTG+AGG | - | chr8.4:15340664-15340683 | None:intergenic | 40.0% | |
| AGAAGAGTTGAGCATTTGCA+AGG | + | chr8.4:15339344-15339363 | MS.gene038709:CDS | 40.0% | |
| AGTGCGAATTGTTTCATCAG+TGG | - | chr8.4:15338228-15338247 | None:intergenic | 40.0% | |
| ATAGCATCAATTGCAGACCT+AGG | - | chr8.4:15338483-15338502 | None:intergenic | 40.0% | |
| ATCAATGACCAACGTACACT+TGG | + | chr8.4:15338426-15338445 | MS.gene038709:CDS | 40.0% | |
| ATTGGAATCATGACGGTGAT+AGG | + | chr8.4:15339501-15339520 | MS.gene038709:CDS | 40.0% | |
| CAAGCTAGAGCAAGTATGTT+AGG | + | chr8.4:15339098-15339117 | MS.gene038709:CDS | 40.0% | |
| CCCCATTAACTTTAACCACA+CGG | - | chr8.4:15338659-15338678 | None:intergenic | 40.0% | |
| CCGTGTGGTTAAAGTTAATG+GGG | + | chr8.4:15338656-15338675 | MS.gene038709:CDS | 40.0% | |
| CGAGACCAAGATTATGATCA+TGG | + | chr8.4:15338810-15338829 | MS.gene038709:CDS | 40.0% | |
| CGCACTGTCTTCAATTTGTA+TGG | + | chr8.4:15338242-15338261 | MS.gene038709:CDS | 40.0% | |
| CTGGATCCACATCTAAGTTA+CGG | - | chr8.4:15339580-15339599 | None:intergenic | 40.0% | |
| GACTACCTTGACATCAAGAA+TGG | - | chr8.4:15338270-15338289 | None:intergenic | 40.0% | |
| GATATTGCTAACATTGGGCT+TGG | + | chr8.4:15340629-15340648 | MS.gene038709:intron | 40.0% | |
| GATGATAGCTCCATTTACGT+TGG | + | chr8.4:15338185-15338204 | MS.gene038709:CDS | 40.0% | |
| GCCGTGTGGTTAAAGTTAAT+GGG | + | chr8.4:15338655-15338674 | MS.gene038709:CDS | 40.0% | |
| GGTCTTGGACAACTTACAAA+TGG | + | chr8.4:15341709-15341728 | MS.gene038709:CDS | 40.0% | |
| TAAGGACCGTAACTTAGATG+TGG | + | chr8.4:15339571-15339590 | MS.gene038709:CDS | 40.0% | |
| TAGCATCAATTGCAGACCTA+GGG | - | chr8.4:15338482-15338501 | None:intergenic | 40.0% | |
| TAGTCCATCAGATTCCAATG+GGG | + | chr8.4:15339803-15339822 | MS.gene038709:CDS | 40.0% | |
| TATATGGTGCAGTTGTATGC+AGG | + | chr8.4:15340977-15340996 | MS.gene038709:intron | 40.0% | |
| TATCCCTAACCATGATGTCA+CGG | - | chr8.4:15339421-15339440 | None:intergenic | 40.0% | |
| TCAATGACCAACGTACACTT+GGG | + | chr8.4:15338427-15338446 | MS.gene038709:CDS | 40.0% | |
| TCTTACTCGATGTTTCTCCT+CGG | - | chr8.4:15339665-15339684 | None:intergenic | 40.0% | |
| TGATAGGGCTGAAAATGAAC+TGG | + | chr8.4:15339517-15339536 | MS.gene038709:CDS | 40.0% | |
| TGGTAATTATTGTTGTGGCG+TGG | + | chr8.4:15338576-15338595 | MS.gene038709:intron | 40.0% | |
| TGGTTAAAGTTAATGGGGTG+AGG | + | chr8.4:15338661-15338680 | MS.gene038709:CDS | 40.0% | |
| TGTGGATCCAGACAAAAAGA+TGG | + | chr8.4:15339589-15339608 | MS.gene038709:CDS | 40.0% | |
| TTACATTGGTCAACTGCATC+TGG | - | chr8.4:15340567-15340586 | None:intergenic | 40.0% | |
| TTCTACTCCTATCTCTGTCA+CGG | - | chr8.4:15339328-15339347 | None:intergenic | 40.0% | |
| TTCTATCCCTATCCCTATCA+TGG | - | chr8.4:15338956-15338975 | None:intergenic | 40.0% | |
| TTGGAATCATGACGGTGATA+GGG | + | chr8.4:15339502-15339521 | MS.gene038709:CDS | 40.0% | |
| ! | CAACTTTTATACCCCTGTCA+CGG | - | chr8.4:15339241-15339260 | None:intergenic | 40.0% |
| ! | CAGCCATTTCCTTGATAACA+AGG | - | chr8.4:15341426-15341445 | None:intergenic | 40.0% |
| ! | GAAAGCATGTTAGATCGTGA+TGG | + | chr8.4:15339293-15339312 | MS.gene038709:CDS | 40.0% |
| ! | GCACGGGTATTTGTATTTTG+AGG | + | chr8.4:15341137-15341156 | MS.gene038709:intron | 40.0% |
| ! | GTGGTGGCAGATCAAATTTT+GGG | + | chr8.4:15338709-15338728 | MS.gene038709:CDS | 40.0% |
| ! | TCTCCTCTTTTATGTGTTGG+TGG | + | chr8.4:15340284-15340303 | MS.gene038709:intron | 40.0% |
| !! | AACCTGGAGTTCTTTTTCAC+TGG | - | chr8.4:15340719-15340738 | None:intergenic | 40.0% |
| !! | GGAGTTACAAAAGCACTCTA+AGG | + | chr8.4:15340378-15340397 | MS.gene038709:CDS | 40.0% |
| !! | TACTTGCTTTTGTGGTCTTC+AGG | + | chr8.4:15339964-15339983 | MS.gene038709:intron | 40.0% |
| AAAGCATGTTAGACCGCGAT+GGG | + | chr8.4:15339387-15339406 | MS.gene038709:CDS | 45.0% | |
| ACAGGAATAGAGGCAGTGAT+TGG | + | chr8.4:15338850-15338869 | MS.gene038709:CDS | 45.0% | |
| AGACCGTGACATCATGGTTA+GGG | + | chr8.4:15339415-15339434 | MS.gene038709:CDS | 45.0% | |
| AGCATTTCCCAAGTGTACGT+TGG | - | chr8.4:15338437-15338456 | None:intergenic | 45.0% | |
| ATAGATCCCGAGACCATGAT+AGG | + | chr8.4:15339126-15339145 | MS.gene038709:CDS | 45.0% | |
| ATAGGTCTCGAGACCATGAT+AGG | + | chr8.4:15338940-15338959 | MS.gene038709:CDS | 45.0% | |
| ATATTTACCGCAGAAACGGG+AGG | + | chr8.4:15340504-15340523 | MS.gene038709:intron | 45.0% | |
| CAGGTTTCTAAGCTGGAAGA+GGG | + | chr8.4:15340328-15340347 | MS.gene038709:intron | 45.0% | |
| GATAGCTCCATTTACGTTGG+TGG | + | chr8.4:15338188-15338207 | MS.gene038709:CDS | 45.0% | |
| GCACCACCAACACATAAAAG+AGG | - | chr8.4:15340290-15340309 | None:intergenic | 45.0% | |
| GGCCGTGTGGTTAAAGTTAA+TGG | + | chr8.4:15338654-15338673 | MS.gene038709:CDS | 45.0% | |
| TAACCATGATGTCACGGTCT+CGG | - | chr8.4:15339415-15339434 | None:intergenic | 45.0% | |
| TAGATCCCGAGACCATGATA+GGG | + | chr8.4:15339127-15339146 | MS.gene038709:CDS | 45.0% | |
| TAGGTCTCGAGACCATGATA+GGG | + | chr8.4:15338941-15338960 | MS.gene038709:CDS | 45.0% | |
| TCAGACTATTAATGGCCGTG+TGG | + | chr8.4:15338641-15338660 | MS.gene038709:intron | 45.0% | |
| TCAGGTTTCTAAGCTGGAAG+AGG | + | chr8.4:15340327-15340346 | MS.gene038709:intron | 45.0% | |
| TCGAGACCATGATAGGGATA+GGG | + | chr8.4:15338947-15338966 | MS.gene038709:CDS | 45.0% | |
| TTCTAAGCTGGAAGAGGGAT+TGG | + | chr8.4:15340333-15340352 | MS.gene038709:CDS | 45.0% | |
| TTCTATCCCTATCCCTGTCA+CGG | - | chr8.4:15339049-15339068 | None:intergenic | 45.0% | |
| !! | GGTGGTGGCAGATCAAATTT+TGG | + | chr8.4:15338708-15338727 | MS.gene038709:CDS | 45.0% |
| !! | AAAGTAAAATTAATAATAAA+TGG | - | chr8.4:15340911-15340930 | None:intergenic | 5.0% |
| !! | TAAAAAAAAATACAATAATA+TGG | - | chr8.4:15338537-15338556 | None:intergenic | 5.0% |
| AAAGCGCGTTAGACCGTGAT+AGG | + | chr8.4:15339201-15339220 | MS.gene038709:CDS | 50.0% | |
| AACCATGATGTCACGGTCTC+GGG | - | chr8.4:15339414-15339433 | None:intergenic | 50.0% | |
| AATGGAGATTGGGATCGTGG+CGG | + | chr8.4:15338771-15338790 | MS.gene038709:CDS | 50.0% | |
| ACAGGGTGGAGATGTGGATA+AGG | + | chr8.4:15339553-15339572 | MS.gene038709:CDS | 50.0% | |
| ACTGGAAAACAGCAGGGTAC+AGG | + | chr8.4:15339535-15339554 | MS.gene038709:CDS | 50.0% | |
| AGAGATCTCGAGACCGTGAT+AGG | + | chr8.4:15338904-15338923 | MS.gene038709:CDS | 50.0% | |
| AGGAATGGAGATTGGGATCG+TGG | + | chr8.4:15338768-15338787 | MS.gene038709:CDS | 50.0% | |
| ATTGGACCAGAGGTGGTGAT+TGG | + | chr8.4:15338868-15338887 | MS.gene038709:CDS | 50.0% | |
| CAATGGGGACCACAATGATG+AGG | + | chr8.4:15339818-15339837 | MS.gene038709:CDS | 50.0% | |
| CATGGTCTCGAGACCTATCA+CGG | - | chr8.4:15338938-15338957 | None:intergenic | 50.0% | |
| CCCTATCCCTATCATGGTCT+CGG | - | chr8.4:15338950-15338969 | None:intergenic | 50.0% | |
| CCGAGACCATGATAGGGATA+GGG | + | chr8.4:15339133-15339152 | MS.gene038709:CDS | 50.0% | |
| CCTATCCCTATCATGGTCTC+GGG | - | chr8.4:15338949-15338968 | None:intergenic | 50.0% | |
| CTCATCATTGTGGTCCCCAT+TGG | - | chr8.4:15339820-15339839 | None:intergenic | 50.0% | |
| CTCGAGACCATGATAGGGAT+AGG | + | chr8.4:15338946-15338965 | MS.gene038709:CDS | 50.0% | |
| CTGGAAAACAGCAGGGTACA+GGG | + | chr8.4:15339536-15339555 | MS.gene038709:CDS | 50.0% | |
| GAGACCGTGACATCATGGTT+AGG | + | chr8.4:15339414-15339433 | MS.gene038709:CDS | 50.0% | |
| GGGAAGACCACCAACGTAAA+TGG | - | chr8.4:15338198-15338217 | None:intergenic | 50.0% | |
| TCCTATCTCTGTCACGGTCT+CGG | - | chr8.4:15339322-15339341 | None:intergenic | 50.0% | |
| TGGCGCCATTCTTGATGTCA+AGG | + | chr8.4:15338262-15338281 | MS.gene038709:CDS | 50.0% | |
| TGGTCCCCATTGGAATCTGA+TGG | - | chr8.4:15339810-15339829 | None:intergenic | 50.0% | |
| TTATACCCCTGTCACGGTCA+CGG | - | chr8.4:15339235-15339254 | None:intergenic | 50.0% | |
| TTGTTCGAGAGTGACGGTGA+TGG | + | chr8.4:15341679-15341698 | MS.gene038709:CDS | 50.0% | |
| ! | ATGGCGATGTCTGCTCTAGA+AGG | + | chr8.4:15340091-15340110 | MS.gene038709:intron | 50.0% |
| ! | GAAAGCATGTTAGACCGCGA+TGG | + | chr8.4:15339386-15339405 | MS.gene038709:CDS | 50.0% |
| ! | GTTTCATCAGTGGCGTCGAA+GGG | - | chr8.4:15338218-15338237 | None:intergenic | 50.0% |
| ! | TGTTTCATCAGTGGCGTCGA+AGG | - | chr8.4:15338219-15338238 | None:intergenic | 50.0% |
| !! | GTGTTGGTGGTGCTGAAAAG+TGG | + | chr8.4:15340297-15340316 | MS.gene038709:intron | 50.0% |
| ACAGCATCCTCCCGTTTCTG+CGG | - | chr8.4:15340514-15340533 | None:intergenic | 55.0% | |
| AGAGGCAGTGATTGGACCAG+AGG | + | chr8.4:15338858-15338877 | MS.gene038709:CDS | 55.0% | |
| CCCGAGACCATGATAGGGAT+AGG | + | chr8.4:15339132-15339151 | MS.gene038709:CDS | 55.0% | |
| CCTATCTCTGTCACGGTCTC+GGG | - | chr8.4:15339321-15339340 | None:intergenic | 55.0% | |
| GAAAACAGCAGGGTACAGGG+TGG | + | chr8.4:15339539-15339558 | MS.gene038709:CDS | 55.0% | |
| GTTAATGGGGTGAGGTCTCG+TGG | + | chr8.4:15338669-15338688 | MS.gene038709:CDS | 55.0% | |
| TCGAGTCCAATCACCACCTC+TGG | - | chr8.4:15338877-15338896 | None:intergenic | 55.0% | |
| ! | GAGAGTGACGGTGATGGTGA+TGG | + | chr8.4:15341685-15341704 | MS.gene038709:CDS | 55.0% |
| !! | AGTGACGGTGATGGTGATGG+TGG | + | chr8.4:15341688-15341707 | MS.gene038709:CDS | 55.0% |
| !! | GGTGATGGTGATGGTGGTCT+TGG | + | chr8.4:15341694-15341713 | MS.gene038709:CDS | 55.0% |
| AATGGGGTGAGGTCTCGTGG+CGG | + | chr8.4:15338672-15338691 | MS.gene038709:CDS | 60.0% | |
| ATAGGTCCCGAGACCGTGAC+AGG | + | chr8.4:15339033-15339052 | MS.gene038709:CDS | 60.0% | |
| ATAGGTCCCGCGACCGTGAT+AGG | + | chr8.4:15338922-15338941 | MS.gene038709:CDS | 60.0% | |
| CACGGTCTCGGGACCTATCA+CGG | - | chr8.4:15339031-15339050 | None:intergenic | 60.0% | |
| CAGGGTACAGGGTGGAGATG+TGG | + | chr8.4:15339547-15339566 | MS.gene038709:CDS | 60.0% | |
| CCCGAGACCGTGACAGAGAT+AGG | + | chr8.4:15339318-15339337 | MS.gene038709:CDS | 60.0% | |
| CCCTATCCCTGTCACGGTCT+CGG | - | chr8.4:15339043-15339062 | None:intergenic | 60.0% | |
| CCGAGACCGTGACAGGGATA+GGG | + | chr8.4:15339040-15339059 | MS.gene038709:CDS | 60.0% | |
| CCTATCCCTGTCACGGTCTC+GGG | - | chr8.4:15339042-15339061 | None:intergenic | 60.0% | |
| CTCGAGACCTATCACGGTCG+CGG | - | chr8.4:15338932-15338951 | None:intergenic | 60.0% | |
| GGCAGTGATTGGACCAGAGG+TGG | + | chr8.4:15338861-15338880 | MS.gene038709:CDS | 60.0% | |
| GTCCCGAGACCGTGACATCA+TGG | + | chr8.4:15339409-15339428 | MS.gene038709:CDS | 60.0% | |
| TAGGTCCCGAGACCGTGACA+GGG | + | chr8.4:15339034-15339053 | MS.gene038709:CDS | 60.0% | |
| TCGAGACCTATCACGGTCGC+GGG | - | chr8.4:15338931-15338950 | None:intergenic | 60.0% | |
| CACGGTCGCGGGACCTATCA+CGG | - | chr8.4:15338920-15338939 | None:intergenic | 65.0% | |
| CCCGAGACCGTGACAGGGAT+AGG | + | chr8.4:15339039-15339058 | MS.gene038709:CDS | 65.0% | |
| CCCTGTCACGGTCACGGTCT+CGG | - | chr8.4:15339229-15339248 | None:intergenic | 65.0% | |
| CCGAGACCGTGACCGTGACA+GGG | + | chr8.4:15339226-15339245 | MS.gene038709:CDS | 65.0% | |
| CCTGTCACGGTCACGGTCTC+GGG | - | chr8.4:15339228-15339247 | None:intergenic | 65.0% | |
| CGAGACCGTGACCGTGACAG+GGG | + | chr8.4:15339227-15339246 | MS.gene038709:CDS | 65.0% | |
| AGGTCTCGTGGCGGTGGAGG+TGG | + | chr8.4:15338681-15338700 | MS.gene038709:CDS | 70.0% | |
| CACGGTCTCGGGACCCATCG+CGG | - | chr8.4:15339403-15339422 | None:intergenic | 70.0% | |
| CCCGAGACCGTGACCGTGAC+AGG | + | chr8.4:15339225-15339244 | MS.gene038709:CDS | 70.0% | |
| GTGAGGTCTCGTGGCGGTGG+AGG | + | chr8.4:15338678-15338697 | MS.gene038709:CDS | 70.0% | |
| TCTCGTGGCGGTGGAGGTGG+CGG | + | chr8.4:15338684-15338703 | MS.gene038709:CDS | 70.0% | |
| GGGGTGAGGTCTCGTGGCGG+TGG | + | chr8.4:15338675-15338694 | MS.gene038709:CDS | 75.0% | |
| ! | GGTGGAGGTGGCGGTGGTGG+TGG | + | chr8.4:15338693-15338712 | MS.gene038709:CDS | 75.0% |
| !! | CGTGGCGGTGGAGGTGGCGG+TGG | + | chr8.4:15338687-15338706 | MS.gene038709:CDS | 80.0% |
| !! | GGCGGTGGAGGTGGCGGTGG+TGG | + | chr8.4:15338690-15338709 | MS.gene038709:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 15338173 | 15341750 | 15338173 | ID=MS.gene038709 |
| chr8.4 | mRNA | 15338173 | 15341750 | 15338173 | ID=MS.gene038709.t1;Parent=MS.gene038709 |
| chr8.4 | exon | 15338173 | 15338283 | 15338173 | ID=MS.gene038709.t1.exon1;Parent=MS.gene038709.t1 |
| chr8.4 | CDS | 15338173 | 15338283 | 15338173 | ID=cds.MS.gene038709.t1;Parent=MS.gene038709.t1 |
| chr8.4 | exon | 15338423 | 15338521 | 15338423 | ID=MS.gene038709.t1.exon2;Parent=MS.gene038709.t1 |
| chr8.4 | CDS | 15338423 | 15338521 | 15338423 | ID=cds.MS.gene038709.t1;Parent=MS.gene038709.t1 |
| chr8.4 | exon | 15338645 | 15339678 | 15338645 | ID=MS.gene038709.t1.exon3;Parent=MS.gene038709.t1 |
| chr8.4 | CDS | 15338645 | 15339678 | 15338645 | ID=cds.MS.gene038709.t1;Parent=MS.gene038709.t1 |
| chr8.4 | exon | 15339782 | 15339839 | 15339782 | ID=MS.gene038709.t1.exon4;Parent=MS.gene038709.t1 |
| chr8.4 | CDS | 15339782 | 15339839 | 15339782 | ID=cds.MS.gene038709.t1;Parent=MS.gene038709.t1 |
| chr8.4 | exon | 15339986 | 15340039 | 15339986 | ID=MS.gene038709.t1.exon5;Parent=MS.gene038709.t1 |
| chr8.4 | CDS | 15339986 | 15340039 | 15339986 | ID=cds.MS.gene038709.t1;Parent=MS.gene038709.t1 |
| chr8.4 | exon | 15340331 | 15340399 | 15340331 | ID=MS.gene038709.t1.exon6;Parent=MS.gene038709.t1 |
| chr8.4 | CDS | 15340331 | 15340399 | 15340331 | ID=cds.MS.gene038709.t1;Parent=MS.gene038709.t1 |
| chr8.4 | exon | 15340517 | 15340582 | 15340517 | ID=MS.gene038709.t1.exon7;Parent=MS.gene038709.t1 |
| chr8.4 | CDS | 15340517 | 15340582 | 15340517 | ID=cds.MS.gene038709.t1;Parent=MS.gene038709.t1 |
| chr8.4 | exon | 15340667 | 15340735 | 15340667 | ID=MS.gene038709.t1.exon8;Parent=MS.gene038709.t1 |
| chr8.4 | CDS | 15340667 | 15340735 | 15340667 | ID=cds.MS.gene038709.t1;Parent=MS.gene038709.t1 |
| chr8.4 | exon | 15341661 | 15341750 | 15341661 | ID=MS.gene038709.t1.exon9;Parent=MS.gene038709.t1 |
| chr8.4 | CDS | 15341661 | 15341750 | 15341661 | ID=cds.MS.gene038709.t1;Parent=MS.gene038709.t1 |
| Gene Sequence |
| Protein sequence |
