Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038718.t1 | XP_003609202.1 | 97.3 | 407 | 11 | 0 | 1 | 407 | 4 | 410 | 3.90E-217 | 763.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038718.t1 | Q1EBV7 | 87.2 | 351 | 44 | 1 | 58 | 407 | 59 | 409 | 3.8e-168 | 592.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038718.t1 | G7JU57 | 97.3 | 407 | 11 | 0 | 1 | 407 | 4 | 410 | 2.8e-217 | 763.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20373 | MS.gene038718 | PPI |
| MS.gene025758 | MS.gene038718 | PPI |
| MS.gene038718 | MS.gene20372 | PPI |
| MS.gene038718 | MS.gene015491 | PPI |
| MS.gene038718 | MS.gene22571 | PPI |
| MS.gene038718 | MS.gene015492 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038718.t1 | MTR_4g113090 | 97.297 | 407 | 11 | 0 | 1 | 407 | 4 | 410 | 0.0 | 803 |
| MS.gene038718.t1 | MTR_2g073190 | 44.985 | 329 | 179 | 2 | 76 | 403 | 354 | 681 | 1.00e-82 | 267 |
| MS.gene038718.t1 | MTR_2g073070 | 48.729 | 236 | 119 | 2 | 169 | 403 | 6 | 240 | 7.38e-66 | 210 |
| MS.gene038718.t1 | MTR_7g053090 | 41.333 | 300 | 171 | 3 | 97 | 392 | 94 | 392 | 2.03e-64 | 212 |
| MS.gene038718.t1 | MTR_5g011440 | 34.551 | 356 | 214 | 6 | 59 | 395 | 68 | 423 | 1.98e-55 | 189 |
| MS.gene038718.t1 | MTR_5g011440 | 34.551 | 356 | 214 | 6 | 59 | 395 | 61 | 416 | 2.29e-55 | 189 |
| MS.gene038718.t1 | MTR_5g011440 | 34.808 | 339 | 202 | 6 | 59 | 378 | 68 | 406 | 2.83e-52 | 180 |
| MS.gene038718.t1 | MTR_5g011450 | 32.143 | 308 | 198 | 4 | 94 | 390 | 10 | 317 | 1.61e-48 | 168 |
| MS.gene038718.t1 | MTR_2g073080 | 36.719 | 128 | 69 | 5 | 43 | 167 | 44 | 162 | 1.72e-15 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038718.t1 | AT2G26900 | 79.146 | 398 | 70 | 4 | 15 | 407 | 20 | 409 | 0.0 | 600 |
| MS.gene038718.t1 | AT1G78560 | 47.305 | 334 | 169 | 5 | 72 | 401 | 71 | 401 | 2.02e-90 | 279 |
| MS.gene038718.t1 | AT3G25410 | 37.968 | 374 | 209 | 8 | 27 | 394 | 53 | 409 | 4.26e-65 | 214 |
| MS.gene038718.t1 | AT4G12030 | 36.478 | 318 | 188 | 6 | 91 | 394 | 87 | 404 | 6.07e-58 | 195 |
| MS.gene038718.t1 | AT4G22840 | 35.714 | 308 | 187 | 4 | 96 | 392 | 94 | 401 | 1.41e-57 | 194 |
| MS.gene038718.t1 | AT4G12030 | 36.741 | 313 | 184 | 6 | 96 | 394 | 1 | 313 | 2.99e-57 | 190 |
| MS.gene038718.t1 | AT4G12030 | 37.407 | 270 | 158 | 5 | 136 | 394 | 1 | 270 | 2.08e-49 | 169 |
| MS.gene038718.t1 | AT4G12030 | 37.407 | 270 | 158 | 5 | 136 | 394 | 1 | 270 | 2.08e-49 | 169 |
| MS.gene038718.t1 | AT4G12030 | 37.407 | 270 | 158 | 5 | 136 | 394 | 1 | 270 | 2.08e-49 | 169 |
Find 98 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCATTTGCTATTGGTTAT+TGG | 0.150047 | 8.4:+15570948 | MS.gene038718:CDS |
| TGATGACAAAGACGACTTTA+AGG | 0.192231 | 8.4:+15571746 | MS.gene038718:CDS |
| GGGTTTCCTCATGCTGTCTA+TGG | 0.198961 | 8.4:+15568612 | MS.gene038718:CDS |
| TCTTGCAACTGGTCTTATTT+TGG | 0.200101 | 8.4:+15569349 | MS.gene038718:CDS |
| CGAGGTGGATAGGTATAATT+TGG | 0.253688 | 8.4:-15566690 | None:intergenic |
| CATGCTGCTGCATTTGCTAT+TGG | 0.299073 | 8.4:+15570941 | MS.gene038718:CDS |
| ACATACCGAAATGATTATTA+AGG | 0.327038 | 8.4:-15566722 | None:intergenic |
| TTCTACAGGTGTTCAACTAT+TGG | 0.338192 | 8.4:+15570096 | MS.gene038718:intron |
| TTGTATGCGCAGGTCATCTT+GGG | 0.340243 | 8.4:+15568429 | MS.gene038718:intron |
| TGCATTTAGAAGTGAGTTGC+AGG | 0.346099 | 8.4:+15566873 | MS.gene038718:CDS |
| TCTTTGTCATCAACGGGAAT+TGG | 0.350500 | 8.4:-15571735 | None:intergenic |
| AATATCCTTAATAATCATTT+CGG | 0.364566 | 8.4:+15566717 | MS.gene038718:CDS |
| TAGTCCATCTAGCGTCAAAA+AGG | 0.368389 | 8.4:+15566935 | MS.gene038718:CDS |
| GACCTATTTACTCTTGGCTT+GGG | 0.369788 | 8.4:+15568592 | MS.gene038718:CDS |
| TTCTCAGACACTAAAACTTT+CGG | 0.372149 | 8.4:+15569322 | MS.gene038718:intron |
| CTTGTATGCGCAGGTCATCT+TGG | 0.374061 | 8.4:+15568428 | MS.gene038718:intron |
| ATCTTACCTCCCACAATTGT+AGG | 0.403675 | 8.4:-15570494 | None:intergenic |
| GATTATCTTTGAAGTGAACT+TGG | 0.415890 | 8.4:-15570677 | None:intergenic |
| AAGTCGTCTTTGTCATCAAC+GGG | 0.418041 | 8.4:-15571741 | None:intergenic |
| AACCCAAGCCAAGAGTAAAT+AGG | 0.419662 | 8.4:-15568594 | None:intergenic |
| TTAGCACCAGTAGCAACAAT+TGG | 0.423758 | 8.4:-15566904 | None:intergenic |
| GGTTTCCTCATGCTGTCTAT+GGG | 0.424749 | 8.4:+15568613 | MS.gene038718:CDS |
| CTCGTGTTGTCCTGGAGGTC+AGG | 0.424832 | 8.4:+15569373 | MS.gene038718:CDS |
| TGGATGTCAAGAATATCATT+TGG | 0.431918 | 8.4:+15570968 | MS.gene038718:CDS |
| GGAGTGCTCTAGCTGTGTAT+TGG | 0.435900 | 8.4:+15571703 | MS.gene038718:CDS |
| GAACTTACAGCAGCATCAAC+AGG | 0.438663 | 8.4:-15570171 | None:intergenic |
| CTTTCGGCTCCTCTTGCAAC+TGG | 0.440648 | 8.4:+15569338 | MS.gene038718:CDS |
| TCAGCTTCAACAAACATATC+TGG | 0.448870 | 8.4:+15568244 | MS.gene038718:CDS |
| ATCTATCGAGTGTGGGATGC+AGG | 0.454978 | 8.4:+15571012 | MS.gene038718:CDS |
| CCAGTAGCAACAATTGGATT+AGG | 0.455683 | 8.4:-15566898 | None:intergenic |
| TTTATTTCAGGTAACTTGGT+TGG | 0.456017 | 8.4:+15568564 | MS.gene038718:intron |
| AAGACAGTTCTTACAGCAGC+TGG | 0.466585 | 8.4:-15568474 | None:intergenic |
| CCTAATCCAATTGTTGCTAC+TGG | 0.467233 | 8.4:+15566898 | MS.gene038718:CDS |
| ACATTTGATGCCTGACCTCC+AGG | 0.471096 | 8.4:-15569383 | None:intergenic |
| GGTATAATTTGGCTTAAGAA+TGG | 0.471739 | 8.4:-15566679 | None:intergenic |
| GAGACAGACCTATTTACTCT+TGG | 0.473070 | 8.4:+15568586 | MS.gene038718:CDS |
| GAGATGTTCCTGAAAGTGCT+GGG | 0.473507 | 8.4:+15568266 | MS.gene038718:CDS |
| TGCTGTCAGTGTTGTCTGCA+TGG | 0.473678 | 8.4:+15571556 | MS.gene038718:CDS |
| TGACTTTATTTCAGGTAACT+TGG | 0.475397 | 8.4:+15568560 | MS.gene038718:intron |
| GGAGATGTTCCTGAAAGTGC+TGG | 0.475562 | 8.4:+15568265 | MS.gene038718:CDS |
| AGCCTTAGACTTACCCAAAC+GGG | 0.475608 | 8.4:-15568337 | None:intergenic |
| AGACCTATTTACTCTTGGCT+TGG | 0.477469 | 8.4:+15568591 | MS.gene038718:CDS |
| ATCACGGTCACACCTTTGAT+AGG | 0.479069 | 8.4:+15570697 | MS.gene038718:CDS |
| ATGGTCTCTGAAAATAACTC+TGG | 0.487045 | 8.4:-15566655 | None:intergenic |
| AGAGAGAGCAACGTTTCCCT+TGG | 0.489152 | 8.4:-15569420 | None:intergenic |
| TGTTTGCAGAGCTCTGCACT+TGG | 0.497307 | 8.4:+15571482 | MS.gene038718:intron |
| GTGCTCTAGCTGTGTATTGG+AGG | 0.507859 | 8.4:+15571706 | MS.gene038718:CDS |
| ATTATCTTTGAAGTGAACTT+GGG | 0.524375 | 8.4:-15570676 | None:intergenic |
| CTCCTAACGAAGCTTCTAGC+TGG | 0.529020 | 8.4:+15570138 | MS.gene038718:CDS |
| GACCAGCTAGAAGCTTCGTT+AGG | 0.533754 | 8.4:-15570140 | None:intergenic |
| TCTTACCTCCCACAATTGTA+GGG | 0.534398 | 8.4:-15570493 | None:intergenic |
| TATTTGATCAAGCCCGTGCT+AGG | 0.535455 | 8.4:+15568796 | MS.gene038718:CDS |
| CTGCCGTAATGCAGCTTGGT+GGG | 0.539439 | 8.4:+15571682 | MS.gene038718:intron |
| CTTGAAAGGTGCTAATTGCC+AGG | 0.540089 | 8.4:-15570460 | None:intergenic |
| GATATTCCTCCGAGGTGGAT+AGG | 0.546749 | 8.4:-15566700 | None:intergenic |
| TGTTTGTCCCTTACAGTCCA+CGG | 0.554456 | 8.4:-15568679 | None:intergenic |
| TGTTGCAACATACATATCCA+AGG | 0.564619 | 8.4:+15569403 | MS.gene038718:CDS |
| AAGCCTTAGACTTACCCAAA+CGG | 0.566589 | 8.4:-15568338 | None:intergenic |
| AAAGTCGTCTTTGTCATCAA+CGG | 0.567068 | 8.4:-15571742 | None:intergenic |
| GACGATGTCTGCGAAATCCG+TGG | 0.569012 | 8.4:+15568662 | MS.gene038718:CDS |
| ACTGCCGTAATGCAGCTTGG+TGG | 0.570730 | 8.4:+15571681 | MS.gene038718:intron |
| CGCACAATATCTATCGAGTG+TGG | 0.573334 | 8.4:+15571004 | MS.gene038718:CDS |
| AGGGACTAAAACAACTTGAA+AGG | 0.575131 | 8.4:-15570474 | None:intergenic |
| GCAGCATGTAAAGCAAGGAC+TGG | 0.578322 | 8.4:-15570926 | None:intergenic |
| GTCAGAATAACTCCTATCAA+AGG | 0.579554 | 8.4:-15570709 | None:intergenic |
| GCTAGAAGCTTCGTTAGGAG+TGG | 0.586839 | 8.4:-15570135 | None:intergenic |
| CAGACAACACTGACAGCAGA+AGG | 0.589026 | 8.4:-15571551 | None:intergenic |
| TCTGAAAATAACTCTGGGCA+TGG | 0.589097 | 8.4:-15566649 | None:intergenic |
| GCATTTAGAAGTGAGTTGCA+GGG | 0.593011 | 8.4:+15566874 | MS.gene038718:CDS |
| TGGTCTCTGAAAATAACTCT+GGG | 0.595321 | 8.4:-15566654 | None:intergenic |
| TGTATGCGCAGGTCATCTTG+GGG | 0.596551 | 8.4:+15568430 | MS.gene038718:intron |
| AGATGTTCCTGAAAGTGCTG+GGG | 0.599940 | 8.4:+15568267 | MS.gene038718:CDS |
| TTGGTCTCGTGTTGTCCTGG+AGG | 0.601309 | 8.4:+15569368 | MS.gene038718:CDS |
| TACTGGGCTTGCACAAAGGA+GGG | 0.601541 | 8.4:-15570734 | None:intergenic |
| TTACTGGGCTTGCACAAAGG+AGG | 0.605677 | 8.4:-15570735 | None:intergenic |
| GATAGATATTGTGCGTGATG+TGG | 0.609427 | 8.4:-15570996 | None:intergenic |
| AAAATAAGACCAGTTGCAAG+AGG | 0.609602 | 8.4:-15569347 | None:intergenic |
| ATGCAGCAGCATGTAAAGCA+AGG | 0.610129 | 8.4:-15570931 | None:intergenic |
| AGGAACAGCTACAAGTGGGT+TGG | 0.613007 | 8.4:-15571531 | None:intergenic |
| GTATGCGCAGGTCATCTTGG+GGG | 0.613520 | 8.4:+15568431 | MS.gene038718:intron |
| GATGTTCCTGAAAGTGCTGG+GGG | 0.615383 | 8.4:+15568268 | MS.gene038718:CDS |
| GCAGAAGGAACAGCTACAAG+TGG | 0.624409 | 8.4:-15571536 | None:intergenic |
| TCAAACCCATAGACAGCATG+AGG | 0.627326 | 8.4:-15568618 | None:intergenic |
| GCACAATATCTATCGAGTGT+GGG | 0.631842 | 8.4:+15571005 | MS.gene038718:CDS |
| GTTCACTTCAAAGATAATCA+CGG | 0.634653 | 8.4:+15570681 | MS.gene038718:CDS |
| AACTTACTGGGCTTGCACAA+AGG | 0.635521 | 8.4:-15570738 | None:intergenic |
| TTAGTCCCTACAATTGTGGG+AGG | 0.636420 | 8.4:+15570488 | MS.gene038718:CDS |
| GTTGCAACATACATATCCAA+GGG | 0.644060 | 8.4:+15569404 | MS.gene038718:CDS |
| TTTGACGCTAGATGGACTAA+GGG | 0.646699 | 8.4:-15566931 | None:intergenic |
| TTAAGGATATTCCTCCGAGG+TGG | 0.654156 | 8.4:-15566705 | None:intergenic |
| CAGAAGGAACAGCTACAAGT+GGG | 0.665602 | 8.4:-15571535 | None:intergenic |
| AATTTGGCTTAAGAATGGCA+TGG | 0.677374 | 8.4:-15566674 | None:intergenic |
| TGGGCTTGCACAAAGGAGGG+TGG | 0.682947 | 8.4:-15570731 | None:intergenic |
| CAAATTATACCTATCCACCT+CGG | 0.703278 | 8.4:+15566691 | MS.gene038718:CDS |
| CAGCTGGCTTGTAAATACCG+AGG | 0.715500 | 8.4:-15568458 | None:intergenic |
| ATTATACCTATCCACCTCGG+AGG | 0.727862 | 8.4:+15566694 | MS.gene038718:CDS |
| TGTCAGTGTTGTCTGCATGG+CGG | 0.751349 | 8.4:+15571559 | MS.gene038718:CDS |
| TTATTAAGGATATTCCTCCG+AGG | 0.766658 | 8.4:-15566708 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAATACAAAATACAT+AGG | - | chr8.4:15569492-15569511 | None:intergenic | 10.0% |
| !! | ATATATATAAAAGATACAAT+GGG | - | chr8.4:15570386-15570405 | None:intergenic | 10.0% |
| !! | TATATATATAAAAGATACAA+TGG | - | chr8.4:15570387-15570406 | None:intergenic | 10.0% |
| !!! | TAAATTTTTGATATTTTTAC+TGG | + | chr8.4:15568136-15568155 | MS.gene038718:intron | 10.0% |
| !! | AAATTATTAATCTATTGATC+TGG | - | chr8.4:15571322-15571341 | None:intergenic | 15.0% |
| !! | AATATCCTTAATAATCATTT+CGG | + | chr8.4:15566717-15566736 | MS.gene038718:CDS | 15.0% |
| !! | TAAATTAGAAACCAATTATA+TGG | + | chr8.4:15569669-15569688 | MS.gene038718:intron | 15.0% |
| !!! | AATGTTTTTGCTTTATTATT+TGG | + | chr8.4:15570630-15570649 | MS.gene038718:intron | 15.0% |
| !!! | ATTAACTTTTTCAAATGATT+AGG | - | chr8.4:15570332-15570351 | None:intergenic | 15.0% |
| !!! | TAGGAATTTTAATTTAAAGT+AGG | + | chr8.4:15567462-15567481 | MS.gene038718:intron | 15.0% |
| !!! | TTACTATTTTACCATATAAT+TGG | - | chr8.4:15569683-15569702 | None:intergenic | 15.0% |
| !!! | TTTGTATTTTATTTTTTCTC+TGG | + | chr8.4:15569498-15569517 | MS.gene038718:intron | 15.0% |
| !!! | TTTTACTTGTTTTGTATTAT+TGG | + | chr8.4:15566812-15566831 | MS.gene038718:intron | 15.0% |
| !! | AATAAATCATAATTAGTGGT+AGG | - | chr8.4:15568740-15568759 | None:intergenic | 20.0% |
| !! | AATAGTAAAACTTATAGGAT+TGG | + | chr8.4:15569695-15569714 | MS.gene038718:intron | 20.0% |
| !! | AATGAAAATCAGAAAAACAA+AGG | + | chr8.4:15568035-15568054 | MS.gene038718:intron | 20.0% |
| !! | ACACAATAAATCATAATTAG+TGG | - | chr8.4:15568744-15568763 | None:intergenic | 20.0% |
| !! | ATATACATTACCACAAATTT+AGG | - | chr8.4:15569807-15569826 | None:intergenic | 20.0% |
| !! | ATATTAATTGTAAGTGCTTT+AGG | + | chr8.4:15571429-15571448 | MS.gene038718:intron | 20.0% |
| !! | ATTCTGATTTATTTCATTGA+TGG | + | chr8.4:15567898-15567917 | MS.gene038718:intron | 20.0% |
| !! | CATTTGAAAAAGTTAATATC+TGG | + | chr8.4:15570335-15570354 | MS.gene038718:intron | 20.0% |
| !! | GGTAAAATAGTAAAACTTAT+AGG | + | chr8.4:15569690-15569709 | MS.gene038718:intron | 20.0% |
| !! | TGGTAATTCAAAATATAACA+GGG | - | chr8.4:15568911-15568930 | None:intergenic | 20.0% |
| !! | TTAGAAGTTACATTACTTAA+TGG | - | chr8.4:15567752-15567771 | None:intergenic | 20.0% |
| !! | TTCTGATTTATTTCATTGAT+GGG | + | chr8.4:15567899-15567918 | MS.gene038718:intron | 20.0% |
| !! | TTGACAAAAAATGAAATAAC+TGG | + | chr8.4:15567019-15567038 | MS.gene038718:intron | 20.0% |
| !!! | TATTAGGATGTATGTTTTTT+AGG | + | chr8.4:15571079-15571098 | MS.gene038718:intron | 20.0% |
| !!! | TATTGTTATGACTTTATTTC+AGG | + | chr8.4:15568552-15568571 | MS.gene038718:intron | 20.0% |
| !!! | TTAATTTAAAGTAGGAACAA+GGG | + | chr8.4:15567470-15567489 | MS.gene038718:intron | 20.0% |
| !!! | TTTAATTTAAAGTAGGAACA+AGG | + | chr8.4:15567469-15567488 | MS.gene038718:intron | 20.0% |
| !!! | TTTCAATAATTTTCTCATAC+TGG | - | chr8.4:15568300-15568319 | None:intergenic | 20.0% |
| !!! | TTTTGTTTGTAATTGTTGAA+TGG | + | chr8.4:15567288-15567307 | MS.gene038718:intron | 20.0% |
| ! | ACAGAACAAATAAATAGAAG+TGG | - | chr8.4:15569151-15569170 | None:intergenic | 25.0% |
| ! | ACATACCGAAATGATTATTA+AGG | - | chr8.4:15566725-15566744 | None:intergenic | 25.0% |
| ! | ACATAGCTAGTTATTTATTG+AGG | + | chr8.4:15569046-15569065 | MS.gene038718:intron | 25.0% |
| ! | ACCAAGAACTTTAATCTAAA+AGG | - | chr8.4:15567430-15567449 | None:intergenic | 25.0% |
| ! | AGCTATTTGTAGAATTAAGA+GGG | - | chr8.4:15571044-15571063 | None:intergenic | 25.0% |
| ! | ATCAGAAAAACAAAGGAAAA+TGG | + | chr8.4:15568042-15568061 | MS.gene038718:intron | 25.0% |
| ! | ATGACATTGAACTAAATTTC+TGG | + | chr8.4:15571345-15571364 | MS.gene038718:intron | 25.0% |
| ! | ATTATACCAAAGTAAACTGT+TGG | - | chr8.4:15570802-15570821 | None:intergenic | 25.0% |
| ! | ATTATATATACCTATGGAGT+TGG | + | chr8.4:15571120-15571139 | MS.gene038718:intron | 25.0% |
| ! | ATTGATATAATCTATCTTGC+CGG | + | chr8.4:15567853-15567872 | MS.gene038718:intron | 25.0% |
| ! | CAATCAAAATCAACTTGTAT+GGG | - | chr8.4:15569630-15569649 | None:intergenic | 25.0% |
| ! | CTACTGAACAATTAAGAAAT+TGG | - | chr8.4:15568387-15568406 | None:intergenic | 25.0% |
| ! | CTTATTGTTCTGTATAAGTT+AGG | + | chr8.4:15568105-15568124 | MS.gene038718:intron | 25.0% |
| ! | GAAAAAGTTAATATCTGGAT+AGG | + | chr8.4:15570340-15570359 | MS.gene038718:intron | 25.0% |
| ! | GAAGTTAATGTTAGCAAATT+TGG | - | chr8.4:15569299-15569318 | None:intergenic | 25.0% |
| ! | GAGACAAATATTTGAAAGAT+TGG | + | chr8.4:15569212-15569231 | MS.gene038718:intron | 25.0% |
| ! | GTATACCTAAAATTCAGAAA+TGG | - | chr8.4:15567798-15567817 | None:intergenic | 25.0% |
| ! | GTGGTAATTCAAAATATAAC+AGG | - | chr8.4:15568912-15568931 | None:intergenic | 25.0% |
| ! | TAAGAAATTGGAAAGATGTT+AGG | - | chr8.4:15568375-15568394 | None:intergenic | 25.0% |
| ! | TCAATCAAAATCAACTTGTA+TGG | - | chr8.4:15569631-15569650 | None:intergenic | 25.0% |
| ! | TGACATTGAACTAAATTTCT+GGG | + | chr8.4:15571346-15571365 | MS.gene038718:intron | 25.0% |
| ! | TGATAACAATCATAAGTCAA+TGG | - | chr8.4:15568967-15568986 | None:intergenic | 25.0% |
| ! | TGTTGTTGAGTACAAATATT+AGG | + | chr8.4:15571063-15571082 | MS.gene038718:intron | 25.0% |
| ! | TTATATGTGTTAGAGTTTGT+TGG | + | chr8.4:15570531-15570550 | MS.gene038718:intron | 25.0% |
| ! | TTCTAGTAATTGAAGTTTGA+TGG | + | chr8.4:15567205-15567224 | MS.gene038718:intron | 25.0% |
| !! | ATATAACTATGTGCTTTTCA+AGG | + | chr8.4:15567922-15567941 | MS.gene038718:intron | 25.0% |
| !! | ATGCTGATTATATATACCTA+TGG | + | chr8.4:15571114-15571133 | MS.gene038718:intron | 25.0% |
| !! | TCTTTGATAACAATCTTATG+TGG | - | chr8.4:15568931-15568950 | None:intergenic | 25.0% |
| !!! | ATGATTTATTGTGTTTTTGC+AGG | + | chr8.4:15568750-15568769 | MS.gene038718:intron | 25.0% |
| !!! | ATTATCTTTGAAGTGAACTT+GGG | - | chr8.4:15570679-15570698 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTCTGGCTTATTT+TGG | + | chr8.4:15569508-15569527 | MS.gene038718:intron | 25.0% |
| !!! | CAAGTTGATTTTGATTGAAT+TGG | + | chr8.4:15569633-15569652 | MS.gene038718:intron | 25.0% |
| !!! | GACATTTTTTTTCCTTTTCT+CGG | + | chr8.4:15571590-15571609 | MS.gene038718:intron | 25.0% |
| !!! | TATTTATTGAGGCCATTTTT+GGG | + | chr8.4:15569057-15569076 | MS.gene038718:intron | 25.0% |
| !!! | TCTTGGTTCTATTTTAAAGT+AGG | + | chr8.4:15567443-15567462 | MS.gene038718:intron | 25.0% |
| !!! | TGTATGTTTTTTAGGCTTTT+AGG | + | chr8.4:15571087-15571106 | MS.gene038718:intron | 25.0% |
| !!! | TTATTTATTGAGGCCATTTT+TGG | + | chr8.4:15569056-15569075 | MS.gene038718:intron | 25.0% |
| !!! | TTTAACTTGTTCAACTTACT+GGG | - | chr8.4:15570753-15570772 | None:intergenic | 25.0% |
| !!! | TTTATTAACAGCTTGCTAAT+AGG | - | chr8.4:15570270-15570289 | None:intergenic | 25.0% |
| AAAATTAGCATTAACAGTCG+TGG | - | chr8.4:15567683-15567702 | None:intergenic | 30.0% | |
| AAATCATAATTAGTGGTAGG+AGG | - | chr8.4:15568737-15568756 | None:intergenic | 30.0% | |
| AAGCTAAAATAACTTCATCC+AGG | - | chr8.4:15569981-15570000 | None:intergenic | 30.0% | |
| AATACATAGGAAACCAAACA+AGG | - | chr8.4:15569479-15569498 | None:intergenic | 30.0% | |
| ACTTGTTTATTGCTATGTCT+AGG | + | chr8.4:15568203-15568222 | MS.gene038718:intron | 30.0% | |
| AGACAATGTCATATAGTAGT+TGG | - | chr8.4:15568079-15568098 | None:intergenic | 30.0% | |
| AGCAATCTATGGTAAAATTC+CGG | - | chr8.4:15567875-15567894 | None:intergenic | 30.0% | |
| AGCTAAAATAACTTCATCCA+GGG | - | chr8.4:15569980-15569999 | None:intergenic | 30.0% | |
| AGGTATGGTTCTTAATGATT+AGG | + | chr8.4:15570596-15570615 | MS.gene038718:intron | 30.0% | |
| AGGTGTTTGCAAATTGAATA+GGG | - | chr8.4:15569749-15569768 | None:intergenic | 30.0% | |
| ATATCTGGATAGGATACTTT+CGG | + | chr8.4:15570350-15570369 | MS.gene038718:intron | 30.0% | |
| CAATTTGCAAACACCTAAAA+AGG | + | chr8.4:15569753-15569772 | MS.gene038718:intron | 30.0% | |
| CAGCTATTTGTAGAATTAAG+AGG | - | chr8.4:15571045-15571064 | None:intergenic | 30.0% | |
| CTATTTGTAGAATTAAGAGG+GGG | - | chr8.4:15571042-15571061 | None:intergenic | 30.0% | |
| GACATTGAACTAAATTTCTG+GGG | + | chr8.4:15571347-15571366 | MS.gene038718:intron | 30.0% | |
| GATGTCAATCTTCTGTAATT+TGG | - | chr8.4:15571277-15571296 | None:intergenic | 30.0% | |
| GCTATTTGTAGAATTAAGAG+GGG | - | chr8.4:15571043-15571062 | None:intergenic | 30.0% | |
| GTACAAACACTTCATATTGA+AGG | - | chr8.4:15567100-15567119 | None:intergenic | 30.0% | |
| GTTACGAGTTAGCTAATTTA+GGG | + | chr8.4:15567261-15567280 | MS.gene038718:intron | 30.0% | |
| GTTCACTTCAAAGATAATCA+CGG | + | chr8.4:15570681-15570700 | MS.gene038718:CDS | 30.0% | |
| TACCTAAAATTCAGAAATGG+AGG | - | chr8.4:15567795-15567814 | None:intergenic | 30.0% | |
| TAGCAAATTTGGCATGATAT+AGG | - | chr8.4:15569288-15569307 | None:intergenic | 30.0% | |
| TAGGTGTTTGCAAATTGAAT+AGG | - | chr8.4:15569750-15569769 | None:intergenic | 30.0% | |
| TCCCTTTCATGCATAAAAAT+AGG | - | chr8.4:15570204-15570223 | None:intergenic | 30.0% | |
| TGGATGTCAAGAATATCATT+TGG | + | chr8.4:15570968-15570987 | MS.gene038718:CDS | 30.0% | |
| TGTTAAAGATCCTGTATGAA+GGG | + | chr8.4:15567346-15567365 | MS.gene038718:intron | 30.0% | |
| TTATTCCAGGAAGAAAAGAA+TGG | - | chr8.4:15567964-15567983 | None:intergenic | 30.0% | |
| TTCTCAGACACTAAAACTTT+CGG | + | chr8.4:15569322-15569341 | MS.gene038718:intron | 30.0% | |
| TTGATTGAATTGGATCAGAT+CGG | + | chr8.4:15569643-15569662 | MS.gene038718:intron | 30.0% | |
| TTTGTTTAAATTCCGCTATG+TGG | - | chr8.4:15567643-15567662 | None:intergenic | 30.0% | |
| ! | AAAGTAAACTGTTGGCTAAA+AGG | - | chr8.4:15570794-15570813 | None:intergenic | 30.0% |
| ! | AAGTAAACTGTTGGCTAAAA+GGG | - | chr8.4:15570793-15570812 | None:intergenic | 30.0% |
| ! | ATCCTCCATTTCTGAATTTT+AGG | + | chr8.4:15567790-15567809 | MS.gene038718:intron | 30.0% |
| ! | CAGAACGAACATAATTTTTC+AGG | - | chr8.4:15571205-15571224 | None:intergenic | 30.0% |
| ! | CATGTTATTTACCATTCTAC+AGG | + | chr8.4:15570082-15570101 | MS.gene038718:intron | 30.0% |
| ! | CGTCTTTTCAAATGACAAAA+GGG | - | chr8.4:15567320-15567339 | None:intergenic | 30.0% |
| ! | GAATTTTACCATAGATTGCT+AGG | + | chr8.4:15567875-15567894 | MS.gene038718:intron | 30.0% |
| ! | GCATTTAAGTTCTTTATTCC+AGG | - | chr8.4:15567977-15567996 | None:intergenic | 30.0% |
| ! | GCCTTTTAGATTAAAGTTCT+TGG | + | chr8.4:15567426-15567445 | MS.gene038718:intron | 30.0% |
| ! | GGTATAATTTGGCTTAAGAA+TGG | - | chr8.4:15566682-15566701 | None:intergenic | 30.0% |
| ! | TGACTTTATTTCAGGTAACT+TGG | + | chr8.4:15568560-15568579 | MS.gene038718:intron | 30.0% |
| ! | TTTATTTCAGGTAACTTGGT+TGG | + | chr8.4:15568564-15568583 | MS.gene038718:intron | 30.0% |
| ! | TTTTAGCCAACAGTTTACTT+TGG | + | chr8.4:15570793-15570812 | MS.gene038718:intron | 30.0% |
| !! | AGAAGTTGTTTTCAGAAATC+AGG | + | chr8.4:15570052-15570071 | MS.gene038718:intron | 30.0% |
| !! | ATTTATTGTGTTTTTGCAGG+TGG | + | chr8.4:15568753-15568772 | MS.gene038718:intron | 30.0% |
| !! | CCTTTTGTCATTTGAAAAGA+CGG | + | chr8.4:15567318-15567337 | MS.gene038718:intron | 30.0% |
| !! | CTTTAACTTGTTCAACTTAC+TGG | - | chr8.4:15570754-15570773 | None:intergenic | 30.0% |
| !! | CTTTTGTCATTTGAAAAGAC+GGG | + | chr8.4:15567319-15567338 | MS.gene038718:intron | 30.0% |
| !! | GATTATCTTTGAAGTGAACT+TGG | - | chr8.4:15570680-15570699 | None:intergenic | 30.0% |
| !! | GCTTTATTATTTGGCAGTTT+TGG | + | chr8.4:15570639-15570658 | MS.gene038718:intron | 30.0% |
| !! | TTAACTTGCATTTCCTTGTT+TGG | + | chr8.4:15569463-15569482 | MS.gene038718:intron | 30.0% |
| !! | TTTATTGTGTTTTTGCAGGT+GGG | + | chr8.4:15568754-15568773 | MS.gene038718:intron | 30.0% |
| !!! | ATGTATTGACTTTTCAGATC+GGG | + | chr8.4:15570858-15570877 | MS.gene038718:intron | 30.0% |
| !!! | CATGTATTGACTTTTCAGAT+CGG | + | chr8.4:15570857-15570876 | MS.gene038718:intron | 30.0% |
| !!! | GCCTATTTTTATGCATGAAA+GGG | + | chr8.4:15570200-15570219 | MS.gene038718:intron | 30.0% |
| !!! | TGCCTATTTTTATGCATGAA+AGG | + | chr8.4:15570199-15570218 | MS.gene038718:intron | 30.0% |
| AAAATAAGACCAGTTGCAAG+AGG | - | chr8.4:15569350-15569369 | None:intergenic | 35.0% | |
| AAAGTCGTCTTTGTCATCAA+CGG | - | chr8.4:15571745-15571764 | None:intergenic | 35.0% | |
| AAATCAACTTGTATGGGATC+AGG | - | chr8.4:15569624-15569643 | None:intergenic | 35.0% | |
| AACACTGCATATCCCAAAAA+TGG | - | chr8.4:15569072-15569091 | None:intergenic | 35.0% | |
| AAGCAATTACAGATAACCTC+AGG | + | chr8.4:15567708-15567727 | MS.gene038718:intron | 35.0% | |
| AATTACTCTTGTGTGTGTCA+TGG | + | chr8.4:15569934-15569953 | MS.gene038718:intron | 35.0% | |
| AGGGACTAAAACAACTTGAA+AGG | - | chr8.4:15570477-15570496 | None:intergenic | 35.0% | |
| ATAACTGGATGTAACCAAGA+TGG | + | chr8.4:15567034-15567053 | MS.gene038718:intron | 35.0% | |
| ATAGTTGAACACCTGTAGAA+TGG | - | chr8.4:15570096-15570115 | None:intergenic | 35.0% | |
| ATATGCAGTGTTTCTTTGTG+TGG | + | chr8.4:15569080-15569099 | MS.gene038718:intron | 35.0% | |
| ATCAGAATCCTAGCAATCTA+TGG | - | chr8.4:15567886-15567905 | None:intergenic | 35.0% | |
| ATCATATAGTGCTTTGTACC+TGG | + | chr8.4:15569011-15569030 | MS.gene038718:intron | 35.0% | |
| ATTGTTCAGTAGTTGAAAGC+TGG | + | chr8.4:15568395-15568414 | MS.gene038718:intron | 35.0% | |
| CAAACAACAAGAAAAGCTAG+AGG | - | chr8.4:15571247-15571266 | None:intergenic | 35.0% | |
| CAAACACACACCTAAATTTG+TGG | + | chr8.4:15569794-15569813 | MS.gene038718:intron | 35.0% | |
| CAAATTATACCTATCCACCT+CGG | + | chr8.4:15566691-15566710 | MS.gene038718:CDS | 35.0% | |
| CACAAATTTAGGTGTGTGTT+TGG | - | chr8.4:15569796-15569815 | None:intergenic | 35.0% | |
| CGTGTTTGAAGAGGATATTT+AGG | - | chr8.4:15569886-15569905 | None:intergenic | 35.0% | |
| CTGTTAAAGATCCTGTATGA+AGG | + | chr8.4:15567345-15567364 | MS.gene038718:intron | 35.0% | |
| CTTACTGAGAATTATGGAGA+GGG | + | chr8.4:15567157-15567176 | MS.gene038718:intron | 35.0% | |
| GCATAGCTTATACAAGCAAT+GGG | + | chr8.4:15567121-15567140 | MS.gene038718:intron | 35.0% | |
| GGTTACGAGTTAGCTAATTT+AGG | + | chr8.4:15567260-15567279 | MS.gene038718:intron | 35.0% | |
| GTCAATCTTCTGTAATTTGG+CGG | - | chr8.4:15571274-15571293 | None:intergenic | 35.0% | |
| GTCAGAATAACTCCTATCAA+AGG | - | chr8.4:15570712-15570731 | None:intergenic | 35.0% | |
| GTGCAAATACTGTCAAGTAA+CGG | + | chr8.4:15567606-15567625 | MS.gene038718:intron | 35.0% | |
| GTTGCAACATACATATCCAA+GGG | + | chr8.4:15569404-15569423 | MS.gene038718:CDS | 35.0% | |
| TATACTAATGTGTCTCCACT+TGG | + | chr8.4:15570569-15570588 | MS.gene038718:intron | 35.0% | |
| TATGCAGTGTTTCTTTGTGT+GGG | + | chr8.4:15569081-15569100 | MS.gene038718:intron | 35.0% | |
| TCAGCTTCAACAAACATATC+TGG | + | chr8.4:15568244-15568263 | MS.gene038718:CDS | 35.0% | |
| TCTGTATAAGTTAGGTACTC+TGG | + | chr8.4:15568113-15568132 | MS.gene038718:intron | 35.0% | |
| TGATGACAAAGACGACTTTA+AGG | + | chr8.4:15571746-15571765 | MS.gene038718:CDS | 35.0% | |
| TGCATAGCTTATACAAGCAA+TGG | + | chr8.4:15567120-15567139 | MS.gene038718:intron | 35.0% | |
| TGTTGCAACATACATATCCA+AGG | + | chr8.4:15569403-15569422 | MS.gene038718:CDS | 35.0% | |
| TGTTGTAGTAACGTTTGATC+TGG | + | chr8.4:15566742-15566761 | MS.gene038718:intron | 35.0% | |
| TTATTAAGGATATTCCTCCG+AGG | - | chr8.4:15566711-15566730 | None:intergenic | 35.0% | |
| TTCTACAGGTGTTCAACTAT+TGG | + | chr8.4:15570096-15570115 | MS.gene038718:intron | 35.0% | |
| ! | AATTTGGCTTAAGAATGGCA+TGG | - | chr8.4:15566677-15566696 | None:intergenic | 35.0% |
| ! | ATGGTCTCTGAAAATAACTC+TGG | - | chr8.4:15566658-15566677 | None:intergenic | 35.0% |
| ! | ATTACCTTTTTGACGCTAGA+TGG | - | chr8.4:15566942-15566961 | None:intergenic | 35.0% |
| ! | CCGTCTTTTCAAATGACAAA+AGG | - | chr8.4:15567321-15567340 | None:intergenic | 35.0% |
| ! | CTAGTCCATAATCTTTGAGA+CGG | - | chr8.4:15567833-15567852 | None:intergenic | 35.0% |
| ! | GTAATTGAAGTTTGATGGAC+TGG | + | chr8.4:15567210-15567229 | MS.gene038718:intron | 35.0% |
| ! | TGAACTAAATTTCTGGGGAA+GGG | + | chr8.4:15571352-15571371 | MS.gene038718:intron | 35.0% |
| ! | TGGTCTCTGAAAATAACTCT+GGG | - | chr8.4:15566657-15566676 | None:intergenic | 35.0% |
| ! | TGTTGCTCTTTCTCTTTTTC+AGG | + | chr8.4:15570436-15570455 | MS.gene038718:intron | 35.0% |
| ! | TGTTTTCGTATGCATTATGC+AGG | + | chr8.4:15567239-15567258 | MS.gene038718:intron | 35.0% |
| ! | TTCATATTGAAGGTGTGTCT+GGG | - | chr8.4:15567090-15567109 | None:intergenic | 35.0% |
| ! | TTCATCCATTCTTTTCTTCC+TGG | + | chr8.4:15567956-15567975 | MS.gene038718:intron | 35.0% |
| ! | TTGAACTAAATTTCTGGGGA+AGG | + | chr8.4:15571351-15571370 | MS.gene038718:intron | 35.0% |
| !! | ATGCTTGCTGTCTTTAAAAG+AGG | + | chr8.4:15569578-15569597 | MS.gene038718:intron | 35.0% |
| !! | ATGTGTTAGAGTTTGTTGGA+CGG | + | chr8.4:15570535-15570554 | MS.gene038718:intron | 35.0% |
| !! | ATTAACAGCTTGCTAATAGG+AGG | - | chr8.4:15570267-15570286 | None:intergenic | 35.0% |
| !! | GTTGCTCTTTCTCTTTTTCA+GGG | + | chr8.4:15570437-15570456 | MS.gene038718:intron | 35.0% |
| !! | GTTTTAGTCCCTACAATTGT+GGG | + | chr8.4:15570485-15570504 | MS.gene038718:CDS | 35.0% |
| !!! | AATCAGAGAAGTACTTTTGC+AGG | - | chr8.4:15569851-15569870 | None:intergenic | 35.0% |
| !!! | GGCTTATTTTGGTTGCTATT+TGG | + | chr8.4:15569519-15569538 | MS.gene038718:intron | 35.0% |
| !!! | TAATTTTCTCATACTGGCTC+AGG | - | chr8.4:15568294-15568313 | None:intergenic | 35.0% |
| !!! | TCTTGCAACTGGTCTTATTT+TGG | + | chr8.4:15569349-15569368 | MS.gene038718:CDS | 35.0% |
| !!! | TGTTTTAGTCCCTACAATTG+TGG | + | chr8.4:15570484-15570503 | MS.gene038718:CDS | 35.0% |
| AAACCAAAGAGACCGAGAAA+AGG | - | chr8.4:15571605-15571624 | None:intergenic | 40.0% | |
| AACCCAAGCCAAGAGTAAAT+AGG | - | chr8.4:15568597-15568616 | None:intergenic | 40.0% | |
| AACTTCATCCAGGGATAACA+CGG | - | chr8.4:15569971-15569990 | None:intergenic | 40.0% | |
| AAGCCTTAGACTTACCCAAA+CGG | - | chr8.4:15568341-15568360 | None:intergenic | 40.0% | |
| AAGTCGTCTTTGTCATCAAC+GGG | - | chr8.4:15571744-15571763 | None:intergenic | 40.0% | |
| ACAACAAGAAAAGCTAGAGG+TGG | - | chr8.4:15571244-15571263 | None:intergenic | 40.0% | |
| ACGAGTTAGCTAATTTAGGG+CGG | + | chr8.4:15567264-15567283 | MS.gene038718:intron | 40.0% | |
| ACTTGTATGGGATCAGGTTT+CGG | - | chr8.4:15569618-15569637 | None:intergenic | 40.0% | |
| AGAAGTGGCAGACATCAATA+TGG | - | chr8.4:15569136-15569155 | None:intergenic | 40.0% | |
| AGACCTATTTACTCTTGGCT+TGG | + | chr8.4:15568591-15568610 | MS.gene038718:CDS | 40.0% | |
| ATACCTGGACTATAGCATAG+CGG | + | chr8.4:15567539-15567558 | MS.gene038718:intron | 40.0% | |
| ATCTTACCTCCCACAATTGT+AGG | - | chr8.4:15570497-15570516 | None:intergenic | 40.0% | |
| ATCTTCTGTAATTTGGCGGT+AGG | - | chr8.4:15571270-15571289 | None:intergenic | 40.0% | |
| CAACAAGAAAAGCTAGAGGT+GGG | - | chr8.4:15571243-15571262 | None:intergenic | 40.0% | |
| CCAGTAGCAACAATTGGATT+AGG | - | chr8.4:15566901-15566920 | None:intergenic | 40.0% | |
| CCTAATCCAATTGTTGCTAC+TGG | + | chr8.4:15566898-15566917 | MS.gene038718:CDS | 40.0% | |
| CCTCTCCATAATTCTCAGTA+AGG | - | chr8.4:15567159-15567178 | None:intergenic | 40.0% | |
| CCTTACTGAGAATTATGGAG+AGG | + | chr8.4:15567156-15567175 | MS.gene038718:intron | 40.0% | |
| CGAGGTGGATAGGTATAATT+TGG | - | chr8.4:15566693-15566712 | None:intergenic | 40.0% | |
| CTATGTTAAGTCCTACAACC+AGG | - | chr8.4:15569032-15569051 | None:intergenic | 40.0% | |
| CTTGTCATTCTTGCTTTGCA+TGG | + | chr8.4:15570827-15570846 | MS.gene038718:intron | 40.0% | |
| GACCTATTTACTCTTGGCTT+GGG | + | chr8.4:15568592-15568611 | MS.gene038718:CDS | 40.0% | |
| GAGACAGACCTATTTACTCT+TGG | + | chr8.4:15568586-15568605 | MS.gene038718:CDS | 40.0% | |
| GATAGATATTGTGCGTGATG+TGG | - | chr8.4:15570999-15571018 | None:intergenic | 40.0% | |
| GCACAATATCTATCGAGTGT+GGG | + | chr8.4:15571005-15571024 | MS.gene038718:CDS | 40.0% | |
| GCATGCCTTACTGAGAATTA+TGG | + | chr8.4:15567151-15567170 | MS.gene038718:intron | 40.0% | |
| GCATTTAGAAGTGAGTTGCA+GGG | + | chr8.4:15566874-15566893 | MS.gene038718:CDS | 40.0% | |
| TAGTCCATCTAGCGTCAAAA+AGG | + | chr8.4:15566935-15566954 | MS.gene038718:CDS | 40.0% | |
| TCTTACCTCCCACAATTGTA+GGG | - | chr8.4:15570496-15570515 | None:intergenic | 40.0% | |
| TCTTTCTGCAGCTAGTTACA+TGG | + | chr8.4:15568493-15568512 | MS.gene038718:intron | 40.0% | |
| TCTTTGTCATCAACGGGAAT+TGG | - | chr8.4:15571738-15571757 | None:intergenic | 40.0% | |
| TGCAAAGCAAGAATGACAAG+TGG | - | chr8.4:15570827-15570846 | None:intergenic | 40.0% | |
| TGCAATGAAAAAGCCTAGCA+CGG | - | chr8.4:15568812-15568831 | None:intergenic | 40.0% | |
| TGCATTTAGAAGTGAGTTGC+AGG | + | chr8.4:15566873-15566892 | MS.gene038718:CDS | 40.0% | |
| TGCTATAGTCCAGGTATAGT+CGG | - | chr8.4:15567536-15567555 | None:intergenic | 40.0% | |
| TGTTATGGGAAGAGTGGAAA+AGG | - | chr8.4:15567513-15567532 | None:intergenic | 40.0% | |
| TTAGCACCAGTAGCAACAAT+TGG | - | chr8.4:15566907-15566926 | None:intergenic | 40.0% | |
| TTAGGTGTGTGTTTGGATTG+CGG | - | chr8.4:15569789-15569808 | None:intergenic | 40.0% | |
| TTATGGAGAGGGATGTGTAA+TGG | + | chr8.4:15567168-15567187 | MS.gene038718:intron | 40.0% | |
| ! | AACCACTCTTTTTCCCGTTT+GGG | + | chr8.4:15568324-15568343 | MS.gene038718:CDS | 40.0% |
| ! | CGGTACAAGAAAGCCTTTTT+AGG | - | chr8.4:15569769-15569788 | None:intergenic | 40.0% |
| ! | CTTCATATTGAAGGTGTGTC+TGG | - | chr8.4:15567091-15567110 | None:intergenic | 40.0% |
| ! | GAACTAAATTTCTGGGGAAG+GGG | + | chr8.4:15571353-15571372 | MS.gene038718:intron | 40.0% |
| ! | GTTTCTTTGTGTGGGTTACT+TGG | + | chr8.4:15569089-15569108 | MS.gene038718:intron | 40.0% |
| ! | TAAACTGTTGGCTAAAAGGG+TGG | - | chr8.4:15570790-15570809 | None:intergenic | 40.0% |
| ! | TAACCACTCTTTTTCCCGTT+TGG | + | chr8.4:15568323-15568342 | MS.gene038718:CDS | 40.0% |
| ! | TTTCCTTTTCTCGGTCTCTT+TGG | + | chr8.4:15571599-15571618 | MS.gene038718:intron | 40.0% |
| !! | GCGGAAGTGTTAAAAACTCA+AGG | + | chr8.4:15570887-15570906 | MS.gene038718:CDS | 40.0% |
| !! | TCCATAATCTTTGAGACGGA+GGG | - | chr8.4:15567829-15567848 | None:intergenic | 40.0% |
| !! | TGACTTTAACTTGTATGCGC+AGG | + | chr8.4:15568419-15568438 | MS.gene038718:intron | 40.0% |
| !! | TGTGTTAGAGTTTGTTGGAC+GGG | + | chr8.4:15570536-15570555 | MS.gene038718:intron | 40.0% |
| !! | TTTGACGCTAGATGGACTAA+GGG | - | chr8.4:15566934-15566953 | None:intergenic | 40.0% |
| !!! | GCTAGGCTTTTTCATTGCAA+TGG | + | chr8.4:15568813-15568832 | MS.gene038718:CDS | 40.0% |
| !!! | TTTTGACGCTAGATGGACTA+AGG | - | chr8.4:15566935-15566954 | None:intergenic | 40.0% |
| AACTTACTGGGCTTGCACAA+AGG | - | chr8.4:15570741-15570760 | None:intergenic | 45.0% | |
| AAGACAGTTCTTACAGCAGC+TGG | - | chr8.4:15568477-15568496 | None:intergenic | 45.0% | |
| AGCCTTAGACTTACCCAAAC+GGG | - | chr8.4:15568340-15568359 | None:intergenic | 45.0% | |
| AGTGCTTTGTACCTGGTTGT+AGG | + | chr8.4:15569018-15569037 | MS.gene038718:intron | 45.0% | |
| ATCACGGTCACACCTTTGAT+AGG | + | chr8.4:15570697-15570716 | MS.gene038718:CDS | 45.0% | |
| ATTACTGCCGTAATGCAGCT+TGG | + | chr8.4:15571678-15571697 | MS.gene038718:intron | 45.0% | |
| ATTATACCTATCCACCTCGG+AGG | + | chr8.4:15566694-15566713 | MS.gene038718:CDS | 45.0% | |
| ATTCCGCTATGCTATAGTCC+AGG | - | chr8.4:15567545-15567564 | None:intergenic | 45.0% | |
| CAGAAGGAACAGCTACAAGT+GGG | - | chr8.4:15571538-15571557 | None:intergenic | 45.0% | |
| CGCACAATATCTATCGAGTG+TGG | + | chr8.4:15571004-15571023 | MS.gene038718:CDS | 45.0% | |
| GAAAAAGCAATCTGAGCCTG+AGG | - | chr8.4:15567727-15567746 | None:intergenic | 45.0% | |
| GAACCATACCTTACACCAAG+TGG | - | chr8.4:15570587-15570606 | None:intergenic | 45.0% | |
| GAACTTACAGCAGCATCAAC+AGG | - | chr8.4:15570174-15570193 | None:intergenic | 45.0% | |
| GCAATGAAAAAGCCTAGCAC+GGG | - | chr8.4:15568811-15568830 | None:intergenic | 45.0% | |
| GCATTAACAGTCGTGGATAG+TGG | - | chr8.4:15567676-15567695 | None:intergenic | 45.0% | |
| GCTATAGCATTGCCACATAG+CGG | + | chr8.4:15567628-15567647 | MS.gene038718:intron | 45.0% | |
| GGTTTCCTCATGCTGTCTAT+GGG | + | chr8.4:15568613-15568632 | MS.gene038718:CDS | 45.0% | |
| GTTGATGCTGCTGTAAGTTC+TGG | + | chr8.4:15570174-15570193 | MS.gene038718:intron | 45.0% | |
| TACCCAAACGGGAAAAAGAG+TGG | - | chr8.4:15568329-15568348 | None:intergenic | 45.0% | |
| TATACAAGCAATGGGCCTAG+TGG | + | chr8.4:15567129-15567148 | MS.gene038718:intron | 45.0% | |
| TATTTGATCAAGCCCGTGCT+AGG | + | chr8.4:15568796-15568815 | MS.gene038718:CDS | 45.0% | |
| TCAAACCCATAGACAGCATG+AGG | - | chr8.4:15568621-15568640 | None:intergenic | 45.0% | |
| TCAGCTTTGCGTGTTTGAAG+AGG | - | chr8.4:15569895-15569914 | None:intergenic | 45.0% | |
| TGCTAAGATGCCAACTCCAT+AGG | - | chr8.4:15571133-15571152 | None:intergenic | 45.0% | |
| TGTTTGTCCCTTACAGTCCA+CGG | - | chr8.4:15568682-15568701 | None:intergenic | 45.0% | |
| TTAAGGATATTCCTCCGAGG+TGG | - | chr8.4:15566708-15566727 | None:intergenic | 45.0% | |
| TTAGTCCCTACAATTGTGGG+AGG | + | chr8.4:15570488-15570507 | MS.gene038718:CDS | 45.0% | |
| TTCCCGTTTGGGTAAGTCTA+AGG | + | chr8.4:15568335-15568354 | MS.gene038718:intron | 45.0% | |
| TTGTATGCGCAGGTCATCTT+GGG | + | chr8.4:15568429-15568448 | MS.gene038718:intron | 45.0% | |
| ! | AACAGACTAGCCCTTCATAC+AGG | - | chr8.4:15567359-15567378 | None:intergenic | 45.0% |
| !! | AGATGTTCCTGAAAGTGCTG+GGG | + | chr8.4:15568267-15568286 | MS.gene038718:CDS | 45.0% |
| !! | ATGTGTCTCCACTTGGTGTA+AGG | + | chr8.4:15570576-15570595 | MS.gene038718:intron | 45.0% |
| !! | ATTTTGGTCTCGTGTTGTCC+TGG | + | chr8.4:15569365-15569384 | MS.gene038718:CDS | 45.0% |
| !! | CCAGGTATAGTCGGTGTTAT+GGG | - | chr8.4:15567527-15567546 | None:intergenic | 45.0% |
| !! | CTTGAAAGGTGCTAATTGCC+AGG | - | chr8.4:15570463-15570482 | None:intergenic | 45.0% |
| !! | GAGATGTTCCTGAAAGTGCT+GGG | + | chr8.4:15568266-15568285 | MS.gene038718:CDS | 45.0% |
| !! | GTCCATAATCTTTGAGACGG+AGG | - | chr8.4:15567830-15567849 | None:intergenic | 45.0% |
| !! | TCCAGGTATAGTCGGTGTTA+TGG | - | chr8.4:15567528-15567547 | None:intergenic | 45.0% |
| !! | TCTCCACTTGGTGTAAGGTA+TGG | + | chr8.4:15570581-15570600 | MS.gene038718:intron | 45.0% |
| !!! | TCTTTCTCTTTTTCAGGGCC+TGG | + | chr8.4:15570442-15570461 | MS.gene038718:intron | 45.0% |
| !!! | TTTCTTTAATTTTTTTTTTT+TGG | + | chr8.4:15568838-15568857 | MS.gene038718:intron | 5.0% |
| ACATTTGATGCCTGACCTCC+AGG | - | chr8.4:15569386-15569405 | None:intergenic | 50.0% | |
| ACTCCCACCAAGCTGCATTA+CGG | - | chr8.4:15571688-15571707 | None:intergenic | 50.0% | |
| AGAGAGAGCAACGTTTCCCT+TGG | - | chr8.4:15569423-15569442 | None:intergenic | 50.0% | |
| AGGAACAGCTACAAGTGGGT+TGG | - | chr8.4:15571534-15571553 | None:intergenic | 50.0% | |
| ATCTATCGAGTGTGGGATGC+AGG | + | chr8.4:15571012-15571031 | MS.gene038718:CDS | 50.0% | |
| CAGACAACACTGACAGCAGA+AGG | - | chr8.4:15571554-15571573 | None:intergenic | 50.0% | |
| CTCCTAACGAAGCTTCTAGC+TGG | + | chr8.4:15570138-15570157 | MS.gene038718:CDS | 50.0% | |
| CTTGTATGCGCAGGTCATCT+TGG | + | chr8.4:15568428-15568447 | MS.gene038718:intron | 50.0% | |
| GACCAGCTAGAAGCTTCGTT+AGG | - | chr8.4:15570143-15570162 | None:intergenic | 50.0% | |
| GATATTCCTCCGAGGTGGAT+AGG | - | chr8.4:15566703-15566722 | None:intergenic | 50.0% | |
| GCAGAAGGAACAGCTACAAG+TGG | - | chr8.4:15571539-15571558 | None:intergenic | 50.0% | |
| GCAGCATGTAAAGCAAGGAC+TGG | - | chr8.4:15570929-15570948 | None:intergenic | 50.0% | |
| GCCCTCCGTCTCAAAGATTA+TGG | + | chr8.4:15567825-15567844 | MS.gene038718:intron | 50.0% | |
| GCTAGAAGCTTCGTTAGGAG+TGG | - | chr8.4:15570138-15570157 | None:intergenic | 50.0% | |
| GGGTTTCCTCATGCTGTCTA+TGG | + | chr8.4:15568612-15568631 | MS.gene038718:CDS | 50.0% | |
| GTGCTCTAGCTGTGTATTGG+AGG | + | chr8.4:15571706-15571725 | MS.gene038718:CDS | 50.0% | |
| TACTGGGCTTGCACAAAGGA+GGG | - | chr8.4:15570737-15570756 | None:intergenic | 50.0% | |
| TCTCAGTAAGGCATGCCACT+AGG | - | chr8.4:15567147-15567166 | None:intergenic | 50.0% | |
| TGCTGTCAGTGTTGTCTGCA+TGG | + | chr8.4:15571556-15571575 | MS.gene038718:CDS | 50.0% | |
| TGTATGCGCAGGTCATCTTG+GGG | + | chr8.4:15568430-15568449 | MS.gene038718:intron | 50.0% | |
| TGTCAGTGTTGTCTGCATGG+CGG | + | chr8.4:15571559-15571578 | MS.gene038718:CDS | 50.0% | |
| TGTCTGCATGGCGGTAAGAT+AGG | + | chr8.4:15571568-15571587 | MS.gene038718:intron | 50.0% | |
| TGTTTGCAGAGCTCTGCACT+TGG | + | chr8.4:15571482-15571501 | MS.gene038718:intron | 50.0% | |
| TTACTGGGCTTGCACAAAGG+AGG | - | chr8.4:15570738-15570757 | None:intergenic | 50.0% | |
| ! | AAGCTAGAGGTGGGTTCTCT+TGG | - | chr8.4:15571234-15571253 | None:intergenic | 50.0% |
| ! | AGAGGTGGGTTCTCTTGGTA+TGG | - | chr8.4:15571229-15571248 | None:intergenic | 50.0% |
| ! | CCCATAACACCGACTATACC+TGG | + | chr8.4:15567524-15567543 | MS.gene038718:intron | 50.0% |
| ! | CTAGTTGATGCACTGTGCTG+TGG | + | chr8.4:15569252-15569271 | MS.gene038718:intron | 50.0% |
| ! | GAGGTGGGTTCTCTTGGTAT+GGG | - | chr8.4:15571228-15571247 | None:intergenic | 50.0% |
| ! | GCGAAATCCGTGGACTGTAA+GGG | + | chr8.4:15568672-15568691 | MS.gene038718:intron | 50.0% |
| ! | GGAACAAGGGAAGAGTGCAT+TGG | + | chr8.4:15567483-15567502 | MS.gene038718:intron | 50.0% |
| ! | GGAGATGTTCCTGAAAGTGC+TGG | + | chr8.4:15568265-15568284 | MS.gene038718:CDS | 50.0% |
| ! | GGAGTGCTCTAGCTGTGTAT+TGG | + | chr8.4:15571703-15571722 | MS.gene038718:CDS | 50.0% |
| ! | TGCGAAATCCGTGGACTGTA+AGG | + | chr8.4:15568671-15568690 | MS.gene038718:intron | 50.0% |
| ! | TTTTCAGATCGGGCAAGTCG+CGG | + | chr8.4:15570868-15570887 | MS.gene038718:intron | 50.0% |
| !! | AGTCGGTGTTATGGGAAGAG+TGG | - | chr8.4:15567519-15567538 | None:intergenic | 50.0% |
| !! | CAGCTGGCTTGTAAATACCG+AGG | - | chr8.4:15568461-15568480 | None:intergenic | 50.0% |
| !! | GATGTTCCTGAAAGTGCTGG+GGG | + | chr8.4:15568268-15568287 | MS.gene038718:CDS | 50.0% |
| !! | GTGTTTTTGCAGGTGGGTGT+GGG | + | chr8.4:15568760-15568779 | MS.gene038718:intron | 50.0% |
| !! | TGTGTTTTTGCAGGTGGGTG+TGG | + | chr8.4:15568759-15568778 | MS.gene038718:intron | 50.0% |
| !! | TGTTTTTGCAGGTGGGTGTG+GGG | + | chr8.4:15568761-15568780 | MS.gene038718:intron | 50.0% |
| ACTGCCGTAATGCAGCTTGG+TGG | + | chr8.4:15571681-15571700 | MS.gene038718:intron | 55.0% | |
| CTGCCGTAATGCAGCTTGGT+GGG | + | chr8.4:15571682-15571701 | MS.gene038718:intron | 55.0% | |
| CTTTCGGCTCCTCTTGCAAC+TGG | + | chr8.4:15569338-15569357 | MS.gene038718:CDS | 55.0% | |
| GAAACTGACGCACGCCATCT+TGG | - | chr8.4:15567051-15567070 | None:intergenic | 55.0% | |
| GACGATGTCTGCGAAATCCG+TGG | + | chr8.4:15568662-15568681 | MS.gene038718:CDS | 55.0% | |
| GTATGCGCAGGTCATCTTGG+GGG | + | chr8.4:15568431-15568450 | MS.gene038718:intron | 55.0% | |
| TTGGTCTCGTGTTGTCCTGG+AGG | + | chr8.4:15569368-15569387 | MS.gene038718:CDS | 55.0% | |
| CAGCTGTGCCGTGTTATCCC+TGG | + | chr8.4:15569960-15569979 | MS.gene038718:intron | 60.0% | |
| CTCGTGTTGTCCTGGAGGTC+AGG | + | chr8.4:15569373-15569392 | MS.gene038718:CDS | 60.0% | |
| GGCGTGCGTCAGTTTCGTGT+TGG | + | chr8.4:15567055-15567074 | MS.gene038718:intron | 60.0% | |
| GTCATCTTGGGGGCTCTCCT+CGG | + | chr8.4:15568441-15568460 | MS.gene038718:CDS | 60.0% | |
| TGGGCTTGCACAAAGGAGGG+TGG | - | chr8.4:15570734-15570753 | None:intergenic | 60.0% | |
| CTCAGGCCCCCAGCACTTTC+AGG | - | chr8.4:15568277-15568296 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 15566651 | 15571773 | 15566651 | ID=MS.gene038718 |
| chr8.4 | mRNA | 15566651 | 15571773 | 15566651 | ID=MS.gene038718.t1;Parent=MS.gene038718 |
| chr8.4 | exon | 15566651 | 15566738 | 15566651 | ID=MS.gene038718.t1.exon1;Parent=MS.gene038718.t1 |
| chr8.4 | CDS | 15566651 | 15566738 | 15566651 | ID=cds.MS.gene038718.t1;Parent=MS.gene038718.t1 |
| chr8.4 | exon | 15566848 | 15566956 | 15566848 | ID=MS.gene038718.t1.exon2;Parent=MS.gene038718.t1 |
| chr8.4 | CDS | 15566848 | 15566956 | 15566848 | ID=cds.MS.gene038718.t1;Parent=MS.gene038718.t1 |
| chr8.4 | exon | 15568225 | 15568345 | 15568225 | ID=MS.gene038718.t1.exon3;Parent=MS.gene038718.t1 |
| chr8.4 | CDS | 15568225 | 15568345 | 15568225 | ID=cds.MS.gene038718.t1;Parent=MS.gene038718.t1 |
| chr8.4 | exon | 15568441 | 15568482 | 15568441 | ID=MS.gene038718.t1.exon4;Parent=MS.gene038718.t1 |
| chr8.4 | CDS | 15568441 | 15568482 | 15568441 | ID=cds.MS.gene038718.t1;Parent=MS.gene038718.t1 |
| chr8.4 | exon | 15568574 | 15568687 | 15568574 | ID=MS.gene038718.t1.exon5;Parent=MS.gene038718.t1 |
| chr8.4 | CDS | 15568574 | 15568687 | 15568574 | ID=cds.MS.gene038718.t1;Parent=MS.gene038718.t1 |
| chr8.4 | exon | 15568772 | 15568834 | 15568772 | ID=MS.gene038718.t1.exon6;Parent=MS.gene038718.t1 |
| chr8.4 | CDS | 15568772 | 15568834 | 15568772 | ID=cds.MS.gene038718.t1;Parent=MS.gene038718.t1 |
| chr8.4 | exon | 15569329 | 15569456 | 15569329 | ID=MS.gene038718.t1.exon7;Parent=MS.gene038718.t1 |
| chr8.4 | CDS | 15569329 | 15569456 | 15569329 | ID=cds.MS.gene038718.t1;Parent=MS.gene038718.t1 |
| chr8.4 | exon | 15570104 | 15570185 | 15570104 | ID=MS.gene038718.t1.exon8;Parent=MS.gene038718.t1 |
| chr8.4 | CDS | 15570104 | 15570185 | 15570104 | ID=cds.MS.gene038718.t1;Parent=MS.gene038718.t1 |
| chr8.4 | exon | 15570458 | 15570509 | 15570458 | ID=MS.gene038718.t1.exon9;Parent=MS.gene038718.t1 |
| chr8.4 | CDS | 15570458 | 15570509 | 15570458 | ID=cds.MS.gene038718.t1;Parent=MS.gene038718.t1 |
| chr8.4 | exon | 15570656 | 15570753 | 15570656 | ID=MS.gene038718.t1.exon10;Parent=MS.gene038718.t1 |
| chr8.4 | CDS | 15570656 | 15570753 | 15570656 | ID=cds.MS.gene038718.t1;Parent=MS.gene038718.t1 |
| chr8.4 | exon | 15570875 | 15571033 | 15570875 | ID=MS.gene038718.t1.exon11;Parent=MS.gene038718.t1 |
| chr8.4 | CDS | 15570875 | 15571033 | 15570875 | ID=cds.MS.gene038718.t1;Parent=MS.gene038718.t1 |
| chr8.4 | exon | 15571491 | 15571580 | 15571491 | ID=MS.gene038718.t1.exon12;Parent=MS.gene038718.t1 |
| chr8.4 | CDS | 15571491 | 15571580 | 15571491 | ID=cds.MS.gene038718.t1;Parent=MS.gene038718.t1 |
| chr8.4 | exon | 15571696 | 15571773 | 15571696 | ID=MS.gene038718.t1.exon13;Parent=MS.gene038718.t1 |
| chr8.4 | CDS | 15571696 | 15571773 | 15571696 | ID=cds.MS.gene038718.t1;Parent=MS.gene038718.t1 |
| Gene Sequence |
| Protein sequence |
