Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55829.t1 | XP_013447243.1 | 99.5 | 588 | 3 | 0 | 1 | 588 | 1 | 588 | 1.20E-304 | 1055 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55829.t1 | O81629 | 73.3 | 536 | 131 | 3 | 63 | 587 | 74 | 608 | 2.4e-216 | 753.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55829.t1 | A0A072U605 | 99.5 | 588 | 3 | 0 | 1 | 588 | 1 | 588 | 8.9e-305 | 1055.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene06110 | MS.gene55829 | 0.853057 | 3.07E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene55829 | MS.gene026418 | PPI |
| MS.gene75846 | MS.gene55829 | PPI |
| MS.gene93780 | MS.gene55829 | PPI |
| MS.gene061659 | MS.gene55829 | PPI |
| MS.gene033840 | MS.gene55829 | PPI |
| MS.gene95892 | MS.gene55829 | PPI |
| MS.gene62618 | MS.gene55829 | PPI |
| MS.gene55829 | MS.gene22354 | PPI |
| MS.gene55829 | MS.gene069541 | PPI |
| MS.gene007355 | MS.gene55829 | PPI |
| MS.gene007592 | MS.gene55829 | PPI |
| MS.gene040852 | MS.gene55829 | PPI |
| MS.gene55829 | MS.gene80320 | PPI |
| MS.gene55829 | MS.gene020596 | PPI |
| MS.gene061041 | MS.gene55829 | PPI |
| MS.gene040149 | MS.gene55829 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55829.t1 | MTR_8g099745 | 99.490 | 588 | 3 | 0 | 1 | 588 | 1 | 588 | 0.0 | 1203 |
| MS.gene55829.t1 | MTR_8g027385 | 69.691 | 551 | 156 | 3 | 37 | 587 | 32 | 571 | 0.0 | 775 |
| MS.gene55829.t1 | MTR_6g007110 | 66.535 | 508 | 169 | 1 | 68 | 574 | 186 | 693 | 0.0 | 701 |
| MS.gene55829.t1 | MTR_3g077950 | 58.761 | 565 | 222 | 3 | 13 | 567 | 191 | 754 | 0.0 | 695 |
| MS.gene55829.t1 | MTR_3g077950 | 58.761 | 565 | 222 | 3 | 13 | 567 | 219 | 782 | 0.0 | 694 |
| MS.gene55829.t1 | MTR_4g106900 | 58.421 | 570 | 213 | 3 | 23 | 569 | 102 | 670 | 0.0 | 687 |
| MS.gene55829.t1 | MTR_6g007110 | 65.991 | 444 | 151 | 0 | 68 | 511 | 186 | 629 | 0.0 | 616 |
| MS.gene55829.t1 | MTR_1g070145 | 28.119 | 537 | 349 | 8 | 38 | 551 | 52 | 574 | 2.06e-49 | 181 |
| MS.gene55829.t1 | MTR_2g023050 | 69.792 | 96 | 28 | 1 | 480 | 574 | 3 | 98 | 2.58e-35 | 130 |
| MS.gene55829.t1 | MTR_6g006830 | 63.793 | 58 | 19 | 1 | 294 | 351 | 12 | 67 | 2.92e-20 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55829.t1 | AT4G10840 | 76.230 | 610 | 119 | 9 | 1 | 588 | 4 | 609 | 0.0 | 927 |
| MS.gene55829.t1 | AT4G10840 | 76.504 | 532 | 100 | 8 | 1 | 511 | 4 | 531 | 0.0 | 810 |
| MS.gene55829.t1 | AT4G10840 | 23.047 | 256 | 190 | 5 | 280 | 531 | 175 | 427 | 8.08e-11 | 65.1 |
| MS.gene55829.t1 | AT3G27960 | 59.239 | 552 | 203 | 8 | 32 | 569 | 109 | 652 | 0.0 | 652 |
| MS.gene55829.t1 | AT3G27960 | 59.239 | 552 | 203 | 8 | 32 | 569 | 109 | 652 | 0.0 | 652 |
| MS.gene55829.t1 | AT1G27500 | 59.808 | 520 | 208 | 1 | 50 | 569 | 135 | 653 | 0.0 | 642 |
| MS.gene55829.t1 | AT1G27500 | 59.808 | 520 | 208 | 1 | 50 | 569 | 124 | 642 | 0.0 | 641 |
| MS.gene55829.t1 | AT3G27960 | 58.907 | 494 | 181 | 8 | 32 | 511 | 109 | 594 | 0.0 | 583 |
| MS.gene55829.t1 | AT2G31240 | 27.307 | 531 | 352 | 8 | 38 | 547 | 73 | 590 | 5.88e-43 | 163 |
Find 167 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTGTCCTCTTTGAATT+TGG | 0.058206 | 4.3:-4249366 | None:intergenic |
| GAGTTGGTGGTTGGGGTTTC+GGG | 0.091077 | 4.3:-4247382 | None:intergenic |
| GGGTGATTGGGTTGGTGTTT+TGG | 0.178570 | 4.3:-4247302 | None:intergenic |
| AGAGTTGGTGGTTGGGGTTT+CGG | 0.211921 | 4.3:-4247383 | None:intergenic |
| GATCTTTGAGTAGGGGTTTC+GGG | 0.248817 | 4.3:-4247271 | None:intergenic |
| TCCTTGATCATACATTAAAA+TGG | 0.256575 | 4.3:-4247764 | None:intergenic |
| CGGTGAAACCTGTCGCTATT+TGG | 0.258596 | 4.3:+4247831 | MS.gene55829:CDS |
| AACAAGAGGTGGCCTGGTTT+GGG | 0.288968 | 4.3:+4249396 | MS.gene55829:CDS |
| GGCGCAGCGTTCGAAGGATT+TGG | 0.308908 | 4.3:-4247527 | None:intergenic |
| CGCTTCTCATCTTCAAAATC+AGG | 0.310556 | 4.3:-4249267 | None:intergenic |
| GGGTTTCGGGTAAGGAGATT+CGG | 0.314955 | 4.3:-4247258 | None:intergenic |
| GAGGAGAGAGTTGGTGGTTG+GGG | 0.316666 | 4.3:-4247389 | None:intergenic |
| GGATCTTTGAGTAGGGGTTT+CGG | 0.325506 | 4.3:-4247272 | None:intergenic |
| GCTCATGGCGAGGTCGAGAC+TGG | 0.332492 | 4.3:-4247563 | None:intergenic |
| TTTGTTAGGGAGGGGTGATT+GGG | 0.335894 | 4.3:-4247314 | None:intergenic |
| TAACAAGAGGTGGCCTGGTT+TGG | 0.336300 | 4.3:+4249395 | MS.gene55829:CDS |
| AGAGGAGAGAGTTGGTGGTT+GGG | 0.339813 | 4.3:-4247390 | None:intergenic |
| ATTTACTCGAAGCCGGTTCC+TGG | 0.341173 | 4.3:+4248291 | MS.gene55829:CDS |
| GCATCTTGTTCTGGCGAGTA+TGG | 0.342306 | 4.3:+4248023 | MS.gene55829:CDS |
| AGACAGAAAAGCAAAGTCTT+TGG | 0.357269 | 4.3:+4249329 | MS.gene55829:CDS |
| GGTTTCGGGTAAGGAGATTC+GGG | 0.358212 | 4.3:-4247257 | None:intergenic |
| GAGAGGAGAGAGTTGGTGGT+TGG | 0.364969 | 4.3:-4247391 | None:intergenic |
| GGCGTTGGAGCATCTTGTTC+TGG | 0.366170 | 4.3:+4248014 | MS.gene55829:CDS |
| ATCTCCTCTGCAGTAGTTCC+AGG | 0.370113 | 4.3:-4248309 | None:intergenic |
| AGAAGGAATGGACCTAGATC+TGG | 0.371588 | 4.3:-4247433 | None:intergenic |
| TTCGAACGCTGCGCCGTTGA+AGG | 0.384353 | 4.3:+4247535 | MS.gene55829:CDS |
| ATTCGGGGCGGAGGTCCACC+TGG | 0.386549 | 4.3:-4247241 | None:intergenic |
| GACACTATCGCTTCCGGCGA+TGG | 0.393002 | 4.3:+4247469 | MS.gene55829:CDS |
| CATGCTCTTGCTGCTTTCTC+CGG | 0.394844 | 4.3:+4247691 | MS.gene55829:CDS |
| TTTGGCGGAGGCGAATGTTC+AGG | 0.402067 | 4.3:+4247849 | MS.gene55829:CDS |
| TTAGGGAGGGGTGATTGGGT+TGG | 0.402449 | 4.3:-4247310 | None:intergenic |
| TGGATCGCGCGTTCGAGAAC+AGG | 0.420650 | 4.3:-4247640 | None:intergenic |
| GCAGAAGGCAATGAAATTGT+TGG | 0.422889 | 4.3:+4248404 | MS.gene55829:CDS |
| GCGTGAAGAAGGAGAGGGAG+AGG | 0.424058 | 4.3:-4247344 | None:intergenic |
| CTGAATTGTTTGAGGAAGCC+AGG | 0.424419 | 4.3:+4248643 | MS.gene55829:CDS |
| GTTTAGCTGATTTGTATCAT+AGG | 0.424643 | 4.3:+4248220 | MS.gene55829:CDS |
| TGCTTTGGCGGGCCCATCGC+CGG | 0.428901 | 4.3:-4247482 | None:intergenic |
| AGCTGCAGATCGGAGACTTA+TGG | 0.429629 | 4.3:+4247957 | MS.gene55829:CDS |
| TAGAATATGTGCTGAAATTG+AGG | 0.430332 | 4.3:+4249220 | MS.gene55829:CDS |
| TTGAGTAGGGGTTTCGGGTA+AGG | 0.430843 | 4.3:-4247266 | None:intergenic |
| GGCATAGTCGAGTGCTTTGG+CGG | 0.446056 | 4.3:-4247494 | None:intergenic |
| GGAGTGATGTATTATATGAT+TGG | 0.448077 | 4.3:+4248477 | MS.gene55829:CDS |
| TGGGTTATCGAGAGAGGCTT+CGG | 0.448263 | 4.3:-4247413 | None:intergenic |
| AAATCATCCTTCTGTTGCTT+CGG | 0.448548 | 4.3:+4248188 | MS.gene55829:CDS |
| TTCTTATCAGAAAGCGCTTA+CGG | 0.456405 | 4.3:+4248143 | MS.gene55829:CDS |
| CAGGAACAGCTTCTTCGAAT+CGG | 0.458327 | 4.3:-4247621 | None:intergenic |
| AGTAAATCGCGGCGAGGACA+TGG | 0.460428 | 4.3:-4247588 | None:intergenic |
| GCCCGCGACACTATCGCTTC+CGG | 0.461619 | 4.3:+4247463 | MS.gene55829:CDS |
| GTCACCTAACTGCATATAAC+CGG | 0.462709 | 4.3:-4247710 | None:intergenic |
| GATCGGTATCACCTAACGTT+TGG | 0.464180 | 4.3:-4247801 | None:intergenic |
| GGACAGCAGAGTACAGTTGC+GGG | 0.464453 | 4.3:+4248438 | MS.gene55829:CDS |
| AGGATTCGGATCTTTGAGTA+GGG | 0.466088 | 4.3:-4247279 | None:intergenic |
| TTCAAATATCGCTGAAACCT+CGG | 0.468954 | 4.3:-4248346 | None:intergenic |
| GCTGATTTGTATCATAGGAC+AGG | 0.468960 | 4.3:+4248225 | MS.gene55829:CDS |
| TTCTCCGGTTATATGCAGTT+AGG | 0.469245 | 4.3:+4247706 | MS.gene55829:CDS |
| TGCAGATTTCCTTTCCCCAC+TGG | 0.470744 | 4.3:-4248553 | None:intergenic |
| GAGGATTCGGATCTTTGAGT+AGG | 0.478050 | 4.3:-4247280 | None:intergenic |
| CTAATTCAATTCACCATGCC+TGG | 0.479549 | 4.3:+4247208 | None:intergenic |
| ATTTCCAATACTCACATCAA+TGG | 0.480593 | 4.3:-4248082 | None:intergenic |
| CGTGAAGAAGGAGAGGGAGA+GGG | 0.481663 | 4.3:-4247343 | None:intergenic |
| TTCTTGTTCAAGAATTCCCC+TGG | 0.482894 | 4.3:-4248661 | None:intergenic |
| TCTCTCGATAACCCAGATCT+AGG | 0.484396 | 4.3:+4247421 | MS.gene55829:CDS |
| TGAAGCTGCTGAATTGTTTG+AGG | 0.486297 | 4.3:+4248635 | MS.gene55829:CDS |
| CGCCTCCGCCAAATAGCGAC+AGG | 0.487480 | 4.3:-4247839 | None:intergenic |
| AAAAGCTTCAACGCTTCCTC+TGG | 0.489968 | 4.3:-4248381 | None:intergenic |
| GCAGCTTCTTCAAGAGAAGC+AGG | 0.490367 | 4.3:-4247940 | None:intergenic |
| GGTAAGGAGATTCGGGGCGG+AGG | 0.490779 | 4.3:-4247250 | None:intergenic |
| GATGGCATAGTCGAGTGCTT+TGG | 0.491407 | 4.3:-4247497 | None:intergenic |
| CAAATTCAGATCCAAACGTT+AGG | 0.491969 | 4.3:+4247790 | MS.gene55829:CDS |
| AACTTCATTATCTTGACCGT+TGG | 0.494243 | 4.3:-4248055 | None:intergenic |
| GCAACTGTACTCTGCTGTCC+AGG | 0.494600 | 4.3:-4248435 | None:intergenic |
| ACACTATCGCTTCCGGCGAT+GGG | 0.496301 | 4.3:+4247470 | MS.gene55829:CDS |
| GCTGAGTTGCTGAAAGAAGC+TGG | 0.496317 | 4.3:+4249297 | MS.gene55829:CDS |
| GCTTCCATTGATGTGAGTAT+TGG | 0.498324 | 4.3:+4248078 | MS.gene55829:CDS |
| TCGGCACCACGCTCAACATC+AGG | 0.500199 | 4.3:-4247667 | None:intergenic |
| ACTACTGCAGAGGAGATTGC+CGG | 0.502725 | 4.3:+4248315 | MS.gene55829:CDS |
| GAAGAAGGAGAGGGAGAGGG+TGG | 0.505490 | 4.3:-4247340 | None:intergenic |
| GAGAGTAACAAGAGGTGGCC+TGG | 0.512764 | 4.3:+4249390 | MS.gene55829:CDS |
| TGCAGCTACTTACGATGCAA+TGG | 0.513646 | 4.3:+4248728 | MS.gene55829:CDS |
| TTCGGAGAGGAGAGAGTTGG+TGG | 0.514406 | 4.3:-4247395 | None:intergenic |
| AAAATATAGCTTCATCAAAA+CGG | 0.515154 | 4.3:-4248122 | None:intergenic |
| GAGACTGGGTTCACCTTCAA+CGG | 0.515665 | 4.3:-4247548 | None:intergenic |
| TTCGGGGCGGAGGTCCACCT+GGG | 0.520899 | 4.3:-4247240 | None:intergenic |
| TCTTAGAATTTACTCGAAGC+CGG | 0.521538 | 4.3:+4248284 | MS.gene55829:CDS |
| AGAATATGTGCTGAAATTGA+GGG | 0.521695 | 4.3:+4249221 | MS.gene55829:CDS |
| ATGCCTGGTCTTGTATCCCC+AGG | 0.530020 | 4.3:+4247223 | MS.gene55829:CDS |
| GAAAGCAGCAAGAGCATGAT+CGG | 0.533567 | 4.3:-4247686 | None:intergenic |
| GCATAGTCGAGTGCTTTGGC+GGG | 0.536165 | 4.3:-4247493 | None:intergenic |
| GAAGGATTTGGAAGCGCGGA+TGG | 0.537538 | 4.3:-4247515 | None:intergenic |
| CGGGCTACTTTGAGAAGGAA+TGG | 0.538375 | 4.3:-4247445 | None:intergenic |
| GCAGCTACTTACGATGCAAT+GGG | 0.540410 | 4.3:+4248729 | MS.gene55829:CDS |
| CGCCGGAAGCGATAGTGTCG+CGG | 0.541043 | 4.3:-4247465 | None:intergenic |
| CTTGGAGCGTGAAGAAGGAG+AGG | 0.542163 | 4.3:-4247350 | None:intergenic |
| CCACCTGGGGATACAAGACC+AGG | 0.542847 | 4.3:-4247226 | None:intergenic |
| TGAAACCTGTCGCTATTTGG+CGG | 0.545497 | 4.3:+4247834 | MS.gene55829:CDS |
| TCTGCAGTAGTTCCAGGAAC+CGG | 0.546580 | 4.3:-4248303 | None:intergenic |
| TCGGGTAAGGAGATTCGGGG+CGG | 0.551979 | 4.3:-4247253 | None:intergenic |
| CTCATGGCGAGGTCGAGACT+GGG | 0.554197 | 4.3:-4247562 | None:intergenic |
| GGCGAAAGGTGATTATGAAT+CGG | 0.554761 | 4.3:+4247993 | MS.gene55829:CDS |
| TGCGGGGATAGAAGCACGGA+TGG | 0.555487 | 4.3:+4248455 | MS.gene55829:CDS |
| CACGCTCAACATCAGGAACA+TGG | 0.557170 | 4.3:-4247660 | None:intergenic |
| CTGATTTGTATCATAGGACA+GGG | 0.557711 | 4.3:+4248226 | MS.gene55829:CDS |
| GGAGCTTTGTAACAAAACCT+TGG | 0.561166 | 4.3:+4247894 | MS.gene55829:CDS |
| GCCGGAAGCGATAGTGTCGC+GGG | 0.567266 | 4.3:-4247464 | None:intergenic |
| AACTGAGAACCAGTGGGGAA+AGG | 0.570086 | 4.3:+4248544 | MS.gene55829:CDS |
| CTCTTGAAGAAGCTGCAGAT+CGG | 0.571252 | 4.3:+4247947 | MS.gene55829:CDS |
| TGAAACCTCGGTCAAACCAC+CGG | 0.571331 | 4.3:-4248334 | None:intergenic |
| TTCAACGGCGCAGCGTTCGA+AGG | 0.574087 | 4.3:-4247533 | None:intergenic |
| CCTTGTCATCAAGATACTCT+CGG | 0.579132 | 4.3:+4248690 | MS.gene55829:CDS |
| ACAAGAGGTGGCCTGGTTTG+GGG | 0.579756 | 4.3:+4249397 | MS.gene55829:CDS |
| TGAATTGTTTGAGGAAGCCA+GGG | 0.579857 | 4.3:+4248644 | MS.gene55829:CDS |
| GTTTCGGGTAAGGAGATTCG+GGG | 0.581165 | 4.3:-4247256 | None:intergenic |
| GGCGAGGACATGGAGGCTCA+TGG | 0.583135 | 4.3:-4247578 | None:intergenic |
| AAATTCAAAGAGGACAAAGA+AGG | 0.585661 | 4.3:+4249368 | MS.gene55829:CDS |
| GGCTTCGGAGAGGAGAGAGT+TGG | 0.588584 | 4.3:-4247398 | None:intergenic |
| GAAGGAATGGACCTAGATCT+GGG | 0.589878 | 4.3:-4247432 | None:intergenic |
| TAAATTCTAAACCCCAAACC+AGG | 0.601983 | 4.3:-4249408 | None:intergenic |
| GAAGGCAATGAAATTGTTGG+AGG | 0.603285 | 4.3:+4248407 | MS.gene55829:CDS |
| TGGGGATACAAGACCAGGCA+TGG | 0.605802 | 4.3:-4247221 | None:intergenic |
| CCGAGAGTATCTTGATGACA+AGG | 0.605990 | 4.3:-4248690 | None:intergenic |
| TTTCAACACAGCACTCTCAA+AGG | 0.608981 | 4.3:-4248523 | None:intergenic |
| GGATTCGGATCTTTGAGTAG+GGG | 0.610218 | 4.3:-4247278 | None:intergenic |
| GGAATTCTTGAACAAGAATG+TGG | 0.610981 | 4.3:+4248666 | MS.gene55829:CDS |
| AGGTGATTATGAATCGGCGT+TGG | 0.611553 | 4.3:+4247999 | MS.gene55829:CDS |
| AAATTGAGGGAAGAGAAGCT+TGG | 0.612289 | 4.3:+4249234 | MS.gene55829:CDS |
| TTGGAGCGTGAAGAAGGAGA+GGG | 0.613060 | 4.3:-4247349 | None:intergenic |
| ACTTATGGCGTTGATTTGTG+AGG | 0.616428 | 4.3:+4247972 | MS.gene55829:CDS |
| AGAAGGAGAGTAACAAGAGG+TGG | 0.616790 | 4.3:+4249385 | MS.gene55829:CDS |
| ACAAACACCGAAGCAACAGA+AGG | 0.618356 | 4.3:-4248195 | None:intergenic |
| GGTTTCACCGACGCGTGGAT+CGG | 0.621169 | 4.3:-4247818 | None:intergenic |
| GAGTGATGTATTATATGATT+GGG | 0.621428 | 4.3:+4248478 | MS.gene55829:CDS |
| ACGGTGTTTAAGTCGTCCAA+AGG | 0.621832 | 4.3:+4248162 | MS.gene55829:CDS |
| AAATTGTTGGAGGATAAACC+TGG | 0.621852 | 4.3:+4248417 | MS.gene55829:CDS |
| TAGATCTGGGTTATCGAGAG+AGG | 0.632804 | 4.3:-4247419 | None:intergenic |
| TGGACAGCAGAGTACAGTTG+CGG | 0.633649 | 4.3:+4248437 | MS.gene55829:CDS |
| GATTGCCGGTGGTTTGACCG+AGG | 0.633667 | 4.3:+4248329 | MS.gene55829:CDS |
| TGAATCTGTTGATGATCCAG+AGG | 0.637084 | 4.3:+4248365 | MS.gene55829:CDS |
| AACCTGTCGCTATTTGGCGG+AGG | 0.638321 | 4.3:+4247837 | MS.gene55829:CDS |
| TTATTGATCCAAATTCAAAG+AGG | 0.640431 | 4.3:+4249358 | MS.gene55829:CDS |
| TGTCGCGGGCTACTTTGAGA+AGG | 0.646398 | 4.3:-4247450 | None:intergenic |
| CCTGGTCTTGTATCCCCAGG+TGG | 0.646721 | 4.3:+4247226 | MS.gene55829:CDS |
| TCGGGGCGGAGGTCCACCTG+GGG | 0.650423 | 4.3:-4247239 | None:intergenic |
| CAGTTGCGGGGATAGAAGCA+CGG | 0.652386 | 4.3:+4248451 | MS.gene55829:CDS |
| CGACAGGTTTCACCGACGCG+TGG | 0.652996 | 4.3:-4247823 | None:intergenic |
| GGACATGGAGGCTCATGGCG+AGG | 0.654929 | 4.3:-4247573 | None:intergenic |
| CTACTTACGATGCAATGGGA+AGG | 0.657643 | 4.3:+4248733 | MS.gene55829:CDS |
| GCGGGGATAGAAGCACGGAT+GGG | 0.658266 | 4.3:+4248456 | MS.gene55829:CDS |
| ATGTGCACGATGAATCTCCA+AGG | 0.659328 | 4.3:-4247911 | None:intergenic |
| GATGCAGTTTGATAAAGCAG+AGG | 0.659355 | 4.3:+4247873 | MS.gene55829:CDS |
| GTGTTGAAACTGAGAACCAG+TGG | 0.668236 | 4.3:+4248537 | MS.gene55829:CDS |
| TATCGAGAGAGGCTTCGGAG+AGG | 0.675847 | 4.3:-4247408 | None:intergenic |
| CATGTTCCTGATGTTGAGCG+TGG | 0.676143 | 4.3:+4247661 | MS.gene55829:CDS |
| GTTCGAAGGATTTGGAAGCG+CGG | 0.680525 | 4.3:-4247519 | None:intergenic |
| ACTGCAGAGGAGATTGCCGG+TGG | 0.680924 | 4.3:+4248318 | MS.gene55829:CDS |
| GACAGCAGAGTACAGTTGCG+GGG | 0.681755 | 4.3:+4248439 | MS.gene55829:CDS |
| GGTTCCTGGAACTACTGCAG+AGG | 0.683112 | 4.3:+4248305 | MS.gene55829:CDS |
| AGTATGGCAATGATCGCCAA+CGG | 0.686660 | 4.3:+4248039 | MS.gene55829:CDS |
| TGTTGAAACTGAGAACCAGT+GGG | 0.688448 | 4.3:+4248538 | MS.gene55829:CDS |
| AAATCGCGGCGAGGACATGG+AGG | 0.690731 | 4.3:-4247585 | None:intergenic |
| CAAAGAAGGAGAGTAACAAG+AGG | 0.698382 | 4.3:+4249382 | MS.gene55829:CDS |
| GGTGATACCGATCCACGCGT+CGG | 0.708941 | 4.3:+4247811 | MS.gene55829:CDS |
| AGCTACAGTAAATCGCGGCG+AGG | 0.710117 | 4.3:-4247594 | None:intergenic |
| TATGATTGGGAAGTACGATG+AGG | 0.711774 | 4.3:+4248491 | MS.gene55829:CDS |
| GTTTAAGCTACAGTAAATCG+CGG | 0.716838 | 4.3:-4247599 | None:intergenic |
| GCGTTGATTTGTGAGGCGAA+AGG | 0.719934 | 4.3:+4247979 | MS.gene55829:CDS |
| GAATTGTTTGAGGAAGCCAG+GGG | 0.735464 | 4.3:+4248645 | MS.gene55829:CDS |
| GTTGAAACTGAGAACCAGTG+GGG | 0.823327 | 4.3:+4248539 | MS.gene55829:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAGCTTCATCAAAA+CGG | - | chr4.3:4248125-4248144 | None:intergenic | 20.0% |
| !! | AAGATTGTTAAAAAGAGAAA+GGG | - | chr4.3:4248771-4248790 | None:intergenic | 20.0% |
| !! | TAAGATTGTTAAAAAGAGAA+AGG | - | chr4.3:4248772-4248791 | None:intergenic | 20.0% |
| ! | ACTAAATTGTTTATCCAAAC+CGG | - | chr4.3:4248815-4248834 | None:intergenic | 25.0% |
| ! | ATAAACAAGACCTTATCTTA+GGG | - | chr4.3:4248858-4248877 | None:intergenic | 25.0% |
| ! | GAGTGATGTATTATATGATT+GGG | + | chr4.3:4248478-4248497 | MS.gene55829:CDS | 25.0% |
| ! | TATAAACAAGACCTTATCTT+AGG | - | chr4.3:4248859-4248878 | None:intergenic | 25.0% |
| ! | TCCTTGATCATACATTAAAA+TGG | - | chr4.3:4247767-4247786 | None:intergenic | 25.0% |
| ! | TTATTGATCCAAATTCAAAG+AGG | + | chr4.3:4249358-4249377 | MS.gene55829:CDS | 25.0% |
| ! | TTTATAACAAGTGCATAAGT+TGG | - | chr4.3:4249039-4249058 | None:intergenic | 25.0% |
| !!! | TCCATTTTAATGTATGATCA+AGG | + | chr4.3:4247763-4247782 | MS.gene55829:CDS | 25.0% |
| AAATTCAAAGAGGACAAAGA+AGG | + | chr4.3:4249368-4249387 | MS.gene55829:CDS | 30.0% | |
| AGAATATGTGCTGAAATTGA+GGG | + | chr4.3:4249221-4249240 | MS.gene55829:CDS | 30.0% | |
| ATTTCCAATACTCACATCAA+TGG | - | chr4.3:4248085-4248104 | None:intergenic | 30.0% | |
| CTAAATTGTTTATCCAAACC+GGG | - | chr4.3:4248814-4248833 | None:intergenic | 30.0% | |
| GGAGTGATGTATTATATGAT+TGG | + | chr4.3:4248477-4248496 | MS.gene55829:CDS | 30.0% | |
| GTTTGATTCAATATTATGCC+CGG | + | chr4.3:4248793-4248812 | MS.gene55829:intron | 30.0% | |
| TAAACAAGACCTTATCTTAG+GGG | - | chr4.3:4248857-4248876 | None:intergenic | 30.0% | |
| TAGAATATGTGCTGAAATTG+AGG | + | chr4.3:4249220-4249239 | MS.gene55829:CDS | 30.0% | |
| TTCTTTGTCCTCTTTGAATT+TGG | - | chr4.3:4249369-4249388 | None:intergenic | 30.0% | |
| !! | GTTTAGCTGATTTGTATCAT+AGG | + | chr4.3:4248220-4248239 | MS.gene55829:CDS | 30.0% |
| !!! | GAAAGGAAATCTGCATTTTT+TGG | + | chr4.3:4248561-4248580 | MS.gene55829:CDS | 30.0% |
| AAATTGTTGGAGGATAAACC+TGG | + | chr4.3:4248417-4248436 | MS.gene55829:CDS | 35.0% | |
| AACTTCATTATCTTGACCGT+TGG | - | chr4.3:4248058-4248077 | None:intergenic | 35.0% | |
| AAGCACTAGTGAAATTCTTC+TGG | - | chr4.3:4249080-4249099 | None:intergenic | 35.0% | |
| AGACAGAAAAGCAAAGTCTT+TGG | + | chr4.3:4249329-4249348 | MS.gene55829:CDS | 35.0% | |
| ATTCAATATTATGCCCGGTT+TGG | + | chr4.3:4248798-4248817 | MS.gene55829:intron | 35.0% | |
| ATTTCACTAGTGCTTATGTG+TGG | + | chr4.3:4249085-4249104 | MS.gene55829:intron | 35.0% | |
| CAAATTCAGATCCAAACGTT+AGG | + | chr4.3:4247790-4247809 | MS.gene55829:CDS | 35.0% | |
| GGAATTCTTGAACAAGAATG+TGG | + | chr4.3:4248666-4248685 | MS.gene55829:CDS | 35.0% | |
| GTGATGATATGATTCAGAGT+TGG | + | chr4.3:4249180-4249199 | MS.gene55829:intron | 35.0% | |
| GTTTAAGCTACAGTAAATCG+CGG | - | chr4.3:4247602-4247621 | None:intergenic | 35.0% | |
| TAAATTCTAAACCCCAAACC+AGG | - | chr4.3:4249411-4249430 | None:intergenic | 35.0% | |
| TAGTATAAGCCCCTAAGATA+AGG | + | chr4.3:4248845-4248864 | MS.gene55829:intron | 35.0% | |
| TCTTAGAATTTACTCGAAGC+CGG | + | chr4.3:4248284-4248303 | MS.gene55829:CDS | 35.0% | |
| TTCAAATATCGCTGAAACCT+CGG | - | chr4.3:4248349-4248368 | None:intergenic | 35.0% | |
| ! | AAATCATCCTTCTGTTGCTT+CGG | + | chr4.3:4248188-4248207 | MS.gene55829:CDS | 35.0% |
| ! | AGAAGGATGATTTTCACCTT+TGG | - | chr4.3:4248181-4248200 | None:intergenic | 35.0% |
| ! | CTGATTTGTATCATAGGACA+GGG | + | chr4.3:4248226-4248245 | MS.gene55829:CDS | 35.0% |
| !! | TGTTTTGAATCAGATGGGAT+TGG | + | chr4.3:4248587-4248606 | MS.gene55829:CDS | 35.0% |
| !! | TTCTTATCAGAAAGCGCTTA+CGG | + | chr4.3:4248143-4248162 | MS.gene55829:CDS | 35.0% |
| !!! | GGTGTTGTTTTGAATCAGAT+GGG | + | chr4.3:4248582-4248601 | MS.gene55829:CDS | 35.0% |
| !!! | TGGTGTTGTTTTGAATCAGA+TGG | + | chr4.3:4248581-4248600 | MS.gene55829:CDS | 35.0% |
| AAATTGAGGGAAGAGAAGCT+TGG | + | chr4.3:4249234-4249253 | MS.gene55829:CDS | 40.0% | |
| AGGATTCGGATCTTTGAGTA+GGG | - | chr4.3:4247282-4247301 | None:intergenic | 40.0% | |
| CAAAGAAGGAGAGTAACAAG+AGG | + | chr4.3:4249382-4249401 | MS.gene55829:CDS | 40.0% | |
| CCTTGTCATCAAGATACTCT+CGG | + | chr4.3:4248690-4248709 | MS.gene55829:CDS | 40.0% | |
| CGCTTCTCATCTTCAAAATC+AGG | - | chr4.3:4249270-4249289 | None:intergenic | 40.0% | |
| GAAGGCAATGAAATTGTTGG+AGG | + | chr4.3:4248407-4248426 | MS.gene55829:CDS | 40.0% | |
| GATGCAGTTTGATAAAGCAG+AGG | + | chr4.3:4247873-4247892 | MS.gene55829:CDS | 40.0% | |
| GCAGAAGGCAATGAAATTGT+TGG | + | chr4.3:4248404-4248423 | MS.gene55829:CDS | 40.0% | |
| GCTTCCATTGATGTGAGTAT+TGG | + | chr4.3:4248078-4248097 | MS.gene55829:CDS | 40.0% | |
| GGCGAAAGGTGATTATGAAT+CGG | + | chr4.3:4247993-4248012 | MS.gene55829:CDS | 40.0% | |
| GTCACCTAACTGCATATAAC+CGG | - | chr4.3:4247713-4247732 | None:intergenic | 40.0% | |
| TGAAGCTGCTGAATTGTTTG+AGG | + | chr4.3:4248635-4248654 | MS.gene55829:CDS | 40.0% | |
| TGAATTGTTTGAGGAAGCCA+GGG | + | chr4.3:4248644-4248663 | MS.gene55829:CDS | 40.0% | |
| TGTTGAAACTGAGAACCAGT+GGG | + | chr4.3:4248538-4248557 | MS.gene55829:CDS | 40.0% | |
| TTCTCCGGTTATATGCAGTT+AGG | + | chr4.3:4247706-4247725 | MS.gene55829:CDS | 40.0% | |
| TTCTTGTTCAAGAATTCCCC+TGG | - | chr4.3:4248664-4248683 | None:intergenic | 40.0% | |
| TTTCAACACAGCACTCTCAA+AGG | - | chr4.3:4248526-4248545 | None:intergenic | 40.0% | |
| ! | GGAGCTTTGTAACAAAACCT+TGG | + | chr4.3:4247894-4247913 | MS.gene55829:CDS | 40.0% |
| ! | TATGATTGGGAAGTACGATG+AGG | + | chr4.3:4248491-4248510 | MS.gene55829:CDS | 40.0% |
| ! | TTTTTCTTGGAGCGTGAAGA+AGG | - | chr4.3:4247358-4247377 | None:intergenic | 40.0% |
| !! | ACTTATGGCGTTGATTTGTG+AGG | + | chr4.3:4247972-4247991 | MS.gene55829:CDS | 40.0% |
| !! | GCTGATTTGTATCATAGGAC+AGG | + | chr4.3:4248225-4248244 | MS.gene55829:CDS | 40.0% |
| !! | TGAATCTGTTGATGATCCAG+AGG | + | chr4.3:4248365-4248384 | MS.gene55829:CDS | 40.0% |
| !!! | GAGAGGGTGGTTTTTTGTTA+GGG | - | chr4.3:4247330-4247349 | None:intergenic | 40.0% |
| !!! | GGTGACACTTTTTCGATGTT+AGG | + | chr4.3:4247727-4247746 | MS.gene55829:CDS | 40.0% |
| !!! | GGTTTCGGGTGTTTTTTTCT+TGG | - | chr4.3:4247371-4247390 | None:intergenic | 40.0% |
| AAAAGCTTCAACGCTTCCTC+TGG | - | chr4.3:4248384-4248403 | None:intergenic | 45.0% | |
| ACAAACACCGAAGCAACAGA+AGG | - | chr4.3:4248198-4248217 | None:intergenic | 45.0% | |
| ACGGTGTTTAAGTCGTCCAA+AGG | + | chr4.3:4248162-4248181 | MS.gene55829:CDS | 45.0% | |
| AGAAGGAATGGACCTAGATC+TGG | - | chr4.3:4247436-4247455 | None:intergenic | 45.0% | |
| AGAAGGAGAGTAACAAGAGG+TGG | + | chr4.3:4249385-4249404 | MS.gene55829:CDS | 45.0% | |
| AGGTGATTATGAATCGGCGT+TGG | + | chr4.3:4247999-4248018 | MS.gene55829:CDS | 45.0% | |
| AGTATGGCAATGATCGCCAA+CGG | + | chr4.3:4248039-4248058 | MS.gene55829:CDS | 45.0% | |
| ATGTGCACGATGAATCTCCA+AGG | - | chr4.3:4247914-4247933 | None:intergenic | 45.0% | |
| CAGGAACAGCTTCTTCGAAT+CGG | - | chr4.3:4247624-4247643 | None:intergenic | 45.0% | |
| CTACTTACGATGCAATGGGA+AGG | + | chr4.3:4248733-4248752 | MS.gene55829:CDS | 45.0% | |
| CTCTTGAAGAAGCTGCAGAT+CGG | + | chr4.3:4247947-4247966 | MS.gene55829:CDS | 45.0% | |
| CTGAATTGTTTGAGGAAGCC+AGG | + | chr4.3:4248643-4248662 | MS.gene55829:CDS | 45.0% | |
| GAAGGAATGGACCTAGATCT+GGG | - | chr4.3:4247435-4247454 | None:intergenic | 45.0% | |
| GAATTGTTTGAGGAAGCCAG+GGG | + | chr4.3:4248645-4248664 | MS.gene55829:CDS | 45.0% | |
| GAGGATTCGGATCTTTGAGT+AGG | - | chr4.3:4247283-4247302 | None:intergenic | 45.0% | |
| GATCGGTATCACCTAACGTT+TGG | - | chr4.3:4247804-4247823 | None:intergenic | 45.0% | |
| GATCTTTGAGTAGGGGTTTC+GGG | - | chr4.3:4247274-4247293 | None:intergenic | 45.0% | |
| GCAGCTACTTACGATGCAAT+GGG | + | chr4.3:4248729-4248748 | MS.gene55829:CDS | 45.0% | |
| GGATCTTTGAGTAGGGGTTT+CGG | - | chr4.3:4247275-4247294 | None:intergenic | 45.0% | |
| GGATTCGGATCTTTGAGTAG+GGG | - | chr4.3:4247281-4247300 | None:intergenic | 45.0% | |
| GTGTTGAAACTGAGAACCAG+TGG | + | chr4.3:4248537-4248556 | MS.gene55829:CDS | 45.0% | |
| GTTGAAACTGAGAACCAGTG+GGG | + | chr4.3:4248539-4248558 | MS.gene55829:CDS | 45.0% | |
| TAGATCTGGGTTATCGAGAG+AGG | - | chr4.3:4247422-4247441 | None:intergenic | 45.0% | |
| TCTCTCGATAACCCAGATCT+AGG | + | chr4.3:4247421-4247440 | MS.gene55829:CDS | 45.0% | |
| TGAAACCTGTCGCTATTTGG+CGG | + | chr4.3:4247834-4247853 | MS.gene55829:CDS | 45.0% | |
| TGCAGCTACTTACGATGCAA+TGG | + | chr4.3:4248728-4248747 | MS.gene55829:CDS | 45.0% | |
| TTTGTTAGGGAGGGGTGATT+GGG | - | chr4.3:4247317-4247336 | None:intergenic | 45.0% | |
| ! | GAAAGCAGCAAGAGCATGAT+CGG | - | chr4.3:4247689-4247708 | None:intergenic | 45.0% |
| ! | TTTTGTTAGGGAGGGGTGAT+TGG | - | chr4.3:4247318-4247337 | None:intergenic | 45.0% |
| !! | AGCGTTGAAGCTTTTGCAGA+AGG | + | chr4.3:4248389-4248408 | MS.gene55829:CDS | 45.0% |
| !! | CCGAGAGTATCTTGATGACA+AGG | - | chr4.3:4248693-4248712 | None:intergenic | 45.0% |
| !!! | AGGGTGGTTTTTTGTTAGGG+AGG | - | chr4.3:4247327-4247346 | None:intergenic | 45.0% |
| !!! | GGAGAGGGTGGTTTTTTGTT+AGG | - | chr4.3:4247331-4247350 | None:intergenic | 45.0% |
| !!! | GGGTGGTTTTTTGTTAGGGA+GGG | - | chr4.3:4247326-4247345 | None:intergenic | 45.0% |
| !!! | GGTGGTTTTTTGTTAGGGAG+GGG | - | chr4.3:4247325-4247344 | None:intergenic | 45.0% |
| !!! | GGTTGGTGTTTTGGAGGATT+CGG | - | chr4.3:4247296-4247315 | None:intergenic | 45.0% |
| !!! | TGATTGGGTTGGTGTTTTGG+AGG | - | chr4.3:4247302-4247321 | None:intergenic | 45.0% |
| AACAAGAGGTGGCCTGGTTT+GGG | + | chr4.3:4249396-4249415 | MS.gene55829:CDS | 50.0% | |
| AACTGAGAACCAGTGGGGAA+AGG | + | chr4.3:4248544-4248563 | MS.gene55829:CDS | 50.0% | |
| ACTACTGCAGAGGAGATTGC+CGG | + | chr4.3:4248315-4248334 | MS.gene55829:CDS | 50.0% | |
| AGCTGCAGATCGGAGACTTA+TGG | + | chr4.3:4247957-4247976 | MS.gene55829:CDS | 50.0% | |
| ATCTCCTCTGCAGTAGTTCC+AGG | - | chr4.3:4248312-4248331 | None:intergenic | 50.0% | |
| CACGCTCAACATCAGGAACA+TGG | - | chr4.3:4247663-4247682 | None:intergenic | 50.0% | |
| CATGTTCCTGATGTTGAGCG+TGG | + | chr4.3:4247661-4247680 | MS.gene55829:CDS | 50.0% | |
| CGGTGAAACCTGTCGCTATT+TGG | + | chr4.3:4247831-4247850 | MS.gene55829:CDS | 50.0% | |
| GAGACTGGGTTCACCTTCAA+CGG | - | chr4.3:4247551-4247570 | None:intergenic | 50.0% | |
| GATGGCATAGTCGAGTGCTT+TGG | - | chr4.3:4247500-4247519 | None:intergenic | 50.0% | |
| GCAGCTTCTTCAAGAGAAGC+AGG | - | chr4.3:4247943-4247962 | None:intergenic | 50.0% | |
| GCATCTTGTTCTGGCGAGTA+TGG | + | chr4.3:4248023-4248042 | MS.gene55829:CDS | 50.0% | |
| GCTGAGTTGCTGAAAGAAGC+TGG | + | chr4.3:4249297-4249316 | MS.gene55829:CDS | 50.0% | |
| GTTCGAAGGATTTGGAAGCG+CGG | - | chr4.3:4247522-4247541 | None:intergenic | 50.0% | |
| TAACAAGAGGTGGCCTGGTT+TGG | + | chr4.3:4249395-4249414 | MS.gene55829:CDS | 50.0% | |
| TCTGCAGTAGTTCCAGGAAC+CGG | - | chr4.3:4248306-4248325 | None:intergenic | 50.0% | |
| TGAAACCTCGGTCAAACCAC+CGG | - | chr4.3:4248337-4248356 | None:intergenic | 50.0% | |
| TGCAGATTTCCTTTCCCCAC+TGG | - | chr4.3:4248556-4248575 | None:intergenic | 50.0% | |
| TGGACAGCAGAGTACAGTTG+CGG | + | chr4.3:4248437-4248456 | MS.gene55829:CDS | 50.0% | |
| TGGGTTATCGAGAGAGGCTT+CGG | - | chr4.3:4247416-4247435 | None:intergenic | 50.0% | |
| TTGGAGCGTGAAGAAGGAGA+GGG | - | chr4.3:4247352-4247371 | None:intergenic | 50.0% | |
| ! | ATTTACTCGAAGCCGGTTCC+TGG | + | chr4.3:4248291-4248310 | MS.gene55829:CDS | 50.0% |
| ! | CGGGCTACTTTGAGAAGGAA+TGG | - | chr4.3:4247448-4247467 | None:intergenic | 50.0% |
| ! | GGGTTTCGGGTAAGGAGATT+CGG | - | chr4.3:4247261-4247280 | None:intergenic | 50.0% |
| ! | GGTTTCGGGTAAGGAGATTC+GGG | - | chr4.3:4247260-4247279 | None:intergenic | 50.0% |
| ! | GTTTCGGGTAAGGAGATTCG+GGG | - | chr4.3:4247259-4247278 | None:intergenic | 50.0% |
| ! | TTGAGTAGGGGTTTCGGGTA+AGG | - | chr4.3:4247269-4247288 | None:intergenic | 50.0% |
| !! | AGAGGAGAGAGTTGGTGGTT+GGG | - | chr4.3:4247393-4247412 | None:intergenic | 50.0% |
| !! | AGAGTTGGTGGTTGGGGTTT+CGG | - | chr4.3:4247386-4247405 | None:intergenic | 50.0% |
| !! | CATGCTCTTGCTGCTTTCTC+CGG | + | chr4.3:4247691-4247710 | MS.gene55829:CDS | 50.0% |
| !! | GCGTTGATTTGTGAGGCGAA+AGG | + | chr4.3:4247979-4247998 | MS.gene55829:CDS | 50.0% |
| !!! | GGGTGATTGGGTTGGTGTTT+TGG | - | chr4.3:4247305-4247324 | None:intergenic | 50.0% |
| AACCTGTCGCTATTTGGCGG+AGG | + | chr4.3:4247837-4247856 | MS.gene55829:CDS | 55.0% | |
| ACACTATCGCTTCCGGCGAT+GGG | + | chr4.3:4247470-4247489 | MS.gene55829:CDS | 55.0% | |
| AGCTACAGTAAATCGCGGCG+AGG | - | chr4.3:4247597-4247616 | None:intergenic | 55.0% | |
| AGTAAATCGCGGCGAGGACA+TGG | - | chr4.3:4247591-4247610 | None:intergenic | 55.0% | |
| CAGTTGCGGGGATAGAAGCA+CGG | + | chr4.3:4248451-4248470 | MS.gene55829:CDS | 55.0% | |
| CGTGAAGAAGGAGAGGGAGA+GGG | - | chr4.3:4247346-4247365 | None:intergenic | 55.0% | |
| CTTGGAGCGTGAAGAAGGAG+AGG | - | chr4.3:4247353-4247372 | None:intergenic | 55.0% | |
| GACAGCAGAGTACAGTTGCG+GGG | + | chr4.3:4248439-4248458 | MS.gene55829:CDS | 55.0% | |
| GAGAGTAACAAGAGGTGGCC+TGG | + | chr4.3:4249390-4249409 | MS.gene55829:CDS | 55.0% | |
| GCAACTGTACTCTGCTGTCC+AGG | - | chr4.3:4248438-4248457 | None:intergenic | 55.0% | |
| GCATAGTCGAGTGCTTTGGC+GGG | - | chr4.3:4247496-4247515 | None:intergenic | 55.0% | |
| GGACAGCAGAGTACAGTTGC+GGG | + | chr4.3:4248438-4248457 | MS.gene55829:CDS | 55.0% | |
| GGCATAGTCGAGTGCTTTGG+CGG | - | chr4.3:4247497-4247516 | None:intergenic | 55.0% | |
| GGTTCCTGGAACTACTGCAG+AGG | + | chr4.3:4248305-4248324 | MS.gene55829:CDS | 55.0% | |
| TATCGAGAGAGGCTTCGGAG+AGG | - | chr4.3:4247411-4247430 | None:intergenic | 55.0% | |
| TTAGGGAGGGGTGATTGGGT+TGG | - | chr4.3:4247313-4247332 | None:intergenic | 55.0% | |
| TTCGGAGAGGAGAGAGTTGG+TGG | - | chr4.3:4247398-4247417 | None:intergenic | 55.0% | |
| TTTGGCGGAGGCGAATGTTC+AGG | + | chr4.3:4247849-4247868 | MS.gene55829:CDS | 55.0% | |
| ! | ACAAGAGGTGGCCTGGTTTG+GGG | + | chr4.3:4249397-4249416 | MS.gene55829:CDS | 55.0% |
| ! | GAAGGATTTGGAAGCGCGGA+TGG | - | chr4.3:4247518-4247537 | None:intergenic | 55.0% |
| ! | GGCGTTGGAGCATCTTGTTC+TGG | + | chr4.3:4248014-4248033 | MS.gene55829:CDS | 55.0% |
| ! | TGTCGCGGGCTACTTTGAGA+AGG | - | chr4.3:4247453-4247472 | None:intergenic | 55.0% |
| !! | ATGCCTGGTCTTGTATCCCC+AGG | + | chr4.3:4247223-4247242 | MS.gene55829:CDS | 55.0% |
| !! | GAGAGGAGAGAGTTGGTGGT+TGG | - | chr4.3:4247394-4247413 | None:intergenic | 55.0% |
| !! | GAGGAGAGAGTTGGTGGTTG+GGG | - | chr4.3:4247392-4247411 | None:intergenic | 55.0% |
| !! | GAGTTGGTGGTTGGGGTTTC+GGG | - | chr4.3:4247385-4247404 | None:intergenic | 55.0% |
| AAATCGCGGCGAGGACATGG+AGG | - | chr4.3:4247588-4247607 | None:intergenic | 60.0% | |
| ACTGCAGAGGAGATTGCCGG+TGG | + | chr4.3:4248318-4248337 | MS.gene55829:CDS | 60.0% | |
| CCACCTGGGGATACAAGACC+AGG | - | chr4.3:4247229-4247248 | None:intergenic | 60.0% | |
| CTCATGGCGAGGTCGAGACT+GGG | - | chr4.3:4247565-4247584 | None:intergenic | 60.0% | |
| GAAGAAGGAGAGGGAGAGGG+TGG | - | chr4.3:4247343-4247362 | None:intergenic | 60.0% | |
| GACACTATCGCTTCCGGCGA+TGG | + | chr4.3:4247469-4247488 | MS.gene55829:CDS | 60.0% | |
| GATTGCCGGTGGTTTGACCG+AGG | + | chr4.3:4248329-4248348 | MS.gene55829:CDS | 60.0% | |
| GCGTGAAGAAGGAGAGGGAG+AGG | - | chr4.3:4247347-4247366 | None:intergenic | 60.0% | |
| GGCGCAGCGTTCGAAGGATT+TGG | - | chr4.3:4247530-4247549 | None:intergenic | 60.0% | |
| GGCTTCGGAGAGGAGAGAGT+TGG | - | chr4.3:4247401-4247420 | None:intergenic | 60.0% | |
| GGTGATACCGATCCACGCGT+CGG | + | chr4.3:4247811-4247830 | MS.gene55829:CDS | 60.0% | |
| GGTTTCACCGACGCGTGGAT+CGG | - | chr4.3:4247821-4247840 | None:intergenic | 60.0% | |
| TCGGCACCACGCTCAACATC+AGG | - | chr4.3:4247670-4247689 | None:intergenic | 60.0% | |
| TCGGGTAAGGAGATTCGGGG+CGG | - | chr4.3:4247256-4247275 | None:intergenic | 60.0% | |
| TGGATCGCGCGTTCGAGAAC+AGG | - | chr4.3:4247643-4247662 | None:intergenic | 60.0% | |
| TTCAACGGCGCAGCGTTCGA+AGG | - | chr4.3:4247536-4247555 | None:intergenic | 60.0% | |
| TTCGAACGCTGCGCCGTTGA+AGG | + | chr4.3:4247535-4247554 | MS.gene55829:CDS | 60.0% | |
| ! | GCGGGGATAGAAGCACGGAT+GGG | + | chr4.3:4248456-4248475 | MS.gene55829:CDS | 60.0% |
| ! | TGCGGGGATAGAAGCACGGA+TGG | + | chr4.3:4248455-4248474 | MS.gene55829:CDS | 60.0% |
| !! | CCTGGTCTTGTATCCCCAGG+TGG | + | chr4.3:4247226-4247245 | MS.gene55829:CDS | 60.0% |
| CGACAGGTTTCACCGACGCG+TGG | - | chr4.3:4247826-4247845 | None:intergenic | 65.0% | |
| CGCCGGAAGCGATAGTGTCG+CGG | - | chr4.3:4247468-4247487 | None:intergenic | 65.0% | |
| CGCCTCCGCCAAATAGCGAC+AGG | - | chr4.3:4247842-4247861 | None:intergenic | 65.0% | |
| GCCCGCGACACTATCGCTTC+CGG | + | chr4.3:4247463-4247482 | MS.gene55829:CDS | 65.0% | |
| GCCGGAAGCGATAGTGTCGC+GGG | - | chr4.3:4247467-4247486 | None:intergenic | 65.0% | |
| GCTCATGGCGAGGTCGAGAC+TGG | - | chr4.3:4247566-4247585 | None:intergenic | 65.0% | |
| GGACATGGAGGCTCATGGCG+AGG | - | chr4.3:4247576-4247595 | None:intergenic | 65.0% | |
| GGCGAGGACATGGAGGCTCA+TGG | - | chr4.3:4247581-4247600 | None:intergenic | 65.0% | |
| GGTAAGGAGATTCGGGGCGG+AGG | - | chr4.3:4247253-4247272 | None:intergenic | 65.0% | |
| ATTCGGGGCGGAGGTCCACC+TGG | - | chr4.3:4247244-4247263 | None:intergenic | 70.0% | |
| TTCGGGGCGGAGGTCCACCT+GGG | - | chr4.3:4247243-4247262 | None:intergenic | 70.0% | |
| ! | TGCTTTGGCGGGCCCATCGC+CGG | - | chr4.3:4247485-4247504 | None:intergenic | 70.0% |
| TCGGGGCGGAGGTCCACCTG+GGG | - | chr4.3:4247242-4247261 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 4247223 | 4249431 | 4247223 | ID=MS.gene55829 |
| chr4.3 | mRNA | 4247223 | 4249431 | 4247223 | ID=MS.gene55829.t1;Parent=MS.gene55829 |
| chr4.3 | exon | 4247223 | 4248754 | 4247223 | ID=MS.gene55829.t1.exon1;Parent=MS.gene55829.t1 |
| chr4.3 | CDS | 4247223 | 4248754 | 4247223 | ID=cds.MS.gene55829.t1;Parent=MS.gene55829.t1 |
| chr4.3 | exon | 4249197 | 4249431 | 4249197 | ID=MS.gene55829.t1.exon2;Parent=MS.gene55829.t1 |
| chr4.3 | CDS | 4249197 | 4249431 | 4249197 | ID=cds.MS.gene55829.t1;Parent=MS.gene55829.t1 |
| Gene Sequence |
| Protein sequence |
