Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06110.t1 | XP_013447243.1 | 99.7 | 588 | 2 | 0 | 1 | 588 | 1 | 588 | 5.50E-305 | 1056.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06110.t1 | O81629 | 73.1 | 536 | 132 | 3 | 63 | 587 | 74 | 608 | 9.2e-216 | 751.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06110.t1 | A0A072U605 | 99.7 | 588 | 2 | 0 | 1 | 588 | 1 | 588 | 4.0e-305 | 1056.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene06110 | MS.gene55829 | 0.853057 | 3.07E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75846 | MS.gene06110 | PPI |
| MS.gene06110 | MS.gene026418 | PPI |
| MS.gene06110 | MS.gene033840 | PPI |
| MS.gene06110 | MS.gene22354 | PPI |
| MS.gene06110 | MS.gene069541 | PPI |
| MS.gene06110 | MS.gene061041 | PPI |
| MS.gene06110 | MS.gene040149 | PPI |
| MS.gene62618 | MS.gene06110 | PPI |
| MS.gene06110 | MS.gene95892 | PPI |
| MS.gene06110 | MS.gene040852 | PPI |
| MS.gene06110 | MS.gene93780 | PPI |
| MS.gene06110 | MS.gene80320 | PPI |
| MS.gene06110 | MS.gene061659 | PPI |
| MS.gene06110 | MS.gene020596 | PPI |
| MS.gene06110 | MS.gene007355 | PPI |
| MS.gene06110 | MS.gene007592 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06110.t1 | MTR_8g099745 | 99.660 | 588 | 2 | 0 | 1 | 588 | 1 | 588 | 0.0 | 1204 |
| MS.gene06110.t1 | MTR_8g027385 | 69.691 | 551 | 156 | 3 | 37 | 587 | 32 | 571 | 0.0 | 776 |
| MS.gene06110.t1 | MTR_6g007110 | 66.732 | 508 | 168 | 1 | 68 | 574 | 186 | 693 | 0.0 | 702 |
| MS.gene06110.t1 | MTR_3g077950 | 58.938 | 565 | 221 | 3 | 13 | 567 | 191 | 754 | 0.0 | 696 |
| MS.gene06110.t1 | MTR_3g077950 | 58.938 | 565 | 221 | 3 | 13 | 567 | 219 | 782 | 0.0 | 696 |
| MS.gene06110.t1 | MTR_4g106900 | 58.421 | 570 | 213 | 3 | 23 | 569 | 102 | 670 | 0.0 | 687 |
| MS.gene06110.t1 | MTR_6g007110 | 66.216 | 444 | 150 | 0 | 68 | 511 | 186 | 629 | 0.0 | 617 |
| MS.gene06110.t1 | MTR_1g070145 | 28.305 | 537 | 348 | 8 | 38 | 551 | 52 | 574 | 8.76e-50 | 182 |
| MS.gene06110.t1 | MTR_2g023050 | 69.792 | 96 | 28 | 1 | 480 | 574 | 3 | 98 | 2.58e-35 | 130 |
| MS.gene06110.t1 | MTR_6g006830 | 63.793 | 58 | 19 | 1 | 294 | 351 | 12 | 67 | 2.92e-20 | 85.1 |
| MS.gene06110.t1 | MTR_6g006860 | 41.111 | 90 | 30 | 3 | 194 | 276 | 49 | 122 | 9.47e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06110.t1 | AT4G10840 | 76.066 | 610 | 120 | 9 | 1 | 588 | 4 | 609 | 0.0 | 925 |
| MS.gene06110.t1 | AT4G10840 | 76.316 | 532 | 101 | 8 | 1 | 511 | 4 | 531 | 0.0 | 808 |
| MS.gene06110.t1 | AT4G10840 | 23.047 | 256 | 190 | 5 | 280 | 531 | 175 | 427 | 9.37e-11 | 65.1 |
| MS.gene06110.t1 | AT3G27960 | 59.420 | 552 | 202 | 8 | 32 | 569 | 109 | 652 | 0.0 | 654 |
| MS.gene06110.t1 | AT3G27960 | 59.420 | 552 | 202 | 8 | 32 | 569 | 109 | 652 | 0.0 | 654 |
| MS.gene06110.t1 | AT1G27500 | 60.000 | 520 | 207 | 1 | 50 | 569 | 135 | 653 | 0.0 | 642 |
| MS.gene06110.t1 | AT1G27500 | 60.000 | 520 | 207 | 1 | 50 | 569 | 124 | 642 | 0.0 | 642 |
| MS.gene06110.t1 | AT3G27960 | 59.109 | 494 | 180 | 8 | 32 | 511 | 109 | 594 | 0.0 | 584 |
| MS.gene06110.t1 | AT2G31240 | 27.495 | 531 | 351 | 8 | 38 | 547 | 73 | 590 | 2.31e-43 | 164 |
Find 165 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTGTCCTCTTTGAATT+TGG | 0.058206 | 4.2:-4025254 | None:intergenic |
| GAGTTGGTGGTTGGGGTTTC+GGG | 0.091077 | 4.2:-4023270 | None:intergenic |
| GGGTGATTGGGTTGGTGTTT+TGG | 0.178570 | 4.2:-4023190 | None:intergenic |
| AGAGTTGGTGGTTGGGGTTT+CGG | 0.211921 | 4.2:-4023271 | None:intergenic |
| GATCTTTGAGTAGGGGTTTC+GGG | 0.248817 | 4.2:-4023159 | None:intergenic |
| TCCTTGATCATACATTAAAA+TGG | 0.256575 | 4.2:-4023652 | None:intergenic |
| CGGTGAAACCTGTCGCTATT+TGG | 0.258596 | 4.2:+4023719 | MS.gene06110:CDS |
| AACAAGAGGTGGCCTGGTTT+GGG | 0.288968 | 4.2:+4025284 | MS.gene06110:CDS |
| GGCGCAGCGTTCGAAGGATT+TGG | 0.308908 | 4.2:-4023415 | None:intergenic |
| CGCTTCTCATCTTCAAAATC+AGG | 0.310556 | 4.2:-4025155 | None:intergenic |
| GGGTTTCGGGTAAGGAGATT+CGG | 0.314955 | 4.2:-4023146 | None:intergenic |
| GAGGAGAGAGTTGGTGGTTG+GGG | 0.316666 | 4.2:-4023277 | None:intergenic |
| GGATCTTTGAGTAGGGGTTT+CGG | 0.325506 | 4.2:-4023160 | None:intergenic |
| GCTCATGGCGAGGTCGAGAC+TGG | 0.332492 | 4.2:-4023451 | None:intergenic |
| TTTGTTAGGGAGGGGTGATT+GGG | 0.335894 | 4.2:-4023202 | None:intergenic |
| TAACAAGAGGTGGCCTGGTT+TGG | 0.336300 | 4.2:+4025283 | MS.gene06110:CDS |
| AGAAGGAATGGACCGAGATC+TGG | 0.336404 | 4.2:-4023321 | None:intergenic |
| AGAGGAGAGAGTTGGTGGTT+GGG | 0.339813 | 4.2:-4023278 | None:intergenic |
| ATTTACTCGAAGCCGGTTCC+TGG | 0.341173 | 4.2:+4024179 | MS.gene06110:CDS |
| GCATCTTGTTCTGGCGAGTA+TGG | 0.342306 | 4.2:+4023911 | MS.gene06110:CDS |
| AGACAGAAAAGCAAAGTCTT+TGG | 0.357269 | 4.2:+4025217 | MS.gene06110:CDS |
| GGTTTCGGGTAAGGAGATTC+GGG | 0.358212 | 4.2:-4023145 | None:intergenic |
| GAGAGGAGAGAGTTGGTGGT+TGG | 0.364969 | 4.2:-4023279 | None:intergenic |
| GGCGTTGGAGCATCTTGTTC+TGG | 0.366170 | 4.2:+4023902 | MS.gene06110:CDS |
| ATCTCCTCTGCAGTAGTTCC+AGG | 0.370113 | 4.2:-4024197 | None:intergenic |
| TTCGAACGCTGCGCCGTTGA+AGG | 0.384353 | 4.2:+4023423 | MS.gene06110:CDS |
| ATTCGGGGCGGAGGTCCACC+TGG | 0.386549 | 4.2:-4023129 | None:intergenic |
| GATCGGTTTCACCTAACGTT+TGG | 0.387674 | 4.2:-4023689 | None:intergenic |
| GACACTATCGCTTCCGGCGA+TGG | 0.393002 | 4.2:+4023357 | MS.gene06110:CDS |
| CATGCTCTTGCTGCTTTCTC+CGG | 0.394844 | 4.2:+4023579 | MS.gene06110:CDS |
| TTTGGCGGAGGCGAATGTTC+AGG | 0.402067 | 4.2:+4023737 | MS.gene06110:CDS |
| TTAGGGAGGGGTGATTGGGT+TGG | 0.402449 | 4.2:-4023198 | None:intergenic |
| TGGATCGCGCGTTCGAGAAC+AGG | 0.420650 | 4.2:-4023528 | None:intergenic |
| GCAGAAGGCAATGAAATTGT+TGG | 0.422889 | 4.2:+4024292 | MS.gene06110:CDS |
| GCGTGAAGAAGGAGAGGGAG+AGG | 0.424058 | 4.2:-4023232 | None:intergenic |
| GTTTAGCTGATTTGTATCAT+AGG | 0.424643 | 4.2:+4024108 | MS.gene06110:CDS |
| TGCTTTGGCGGGCCCATCGC+CGG | 0.428901 | 4.2:-4023370 | None:intergenic |
| AGCTGCAGATCGGAGACTTA+TGG | 0.429629 | 4.2:+4023845 | MS.gene06110:CDS |
| CTGAATTGTTTGAGGAAGCT+AGG | 0.429677 | 4.2:+4024531 | MS.gene06110:CDS |
| TAGAATATGTGCTGAAATTG+AGG | 0.430332 | 4.2:+4025108 | MS.gene06110:CDS |
| TTGAGTAGGGGTTTCGGGTA+AGG | 0.430843 | 4.2:-4023154 | None:intergenic |
| GGCATAGTCGAGTGCTTTGG+CGG | 0.446056 | 4.2:-4023382 | None:intergenic |
| GGAGTGATGTATTATATGAT+TGG | 0.448077 | 4.2:+4024365 | MS.gene06110:CDS |
| TGGGTTATCGAGAGAGGCTT+CGG | 0.448263 | 4.2:-4023301 | None:intergenic |
| AAATCATCCTTCTGTTGCTT+CGG | 0.448548 | 4.2:+4024076 | MS.gene06110:CDS |
| TTCTTATCAGAAAGCGCTTA+CGG | 0.456405 | 4.2:+4024031 | MS.gene06110:CDS |
| CAGGAACAGCTTCTTCGAAT+CGG | 0.458327 | 4.2:-4023509 | None:intergenic |
| AGTAAATCGCGGCGAGGACA+TGG | 0.460428 | 4.2:-4023476 | None:intergenic |
| GCCCGCGACACTATCGCTTC+CGG | 0.461619 | 4.2:+4023351 | MS.gene06110:CDS |
| GTCACCTAACTGCATATAAC+CGG | 0.462709 | 4.2:-4023598 | None:intergenic |
| GGACAGCAGAGTACAGTTGC+GGG | 0.464453 | 4.2:+4024326 | MS.gene06110:CDS |
| AGGATTCGGATCTTTGAGTA+GGG | 0.466088 | 4.2:-4023167 | None:intergenic |
| TTCAAATATCGCTGAAACCT+CGG | 0.468954 | 4.2:-4024234 | None:intergenic |
| GCTGATTTGTATCATAGGAC+AGG | 0.468960 | 4.2:+4024113 | MS.gene06110:CDS |
| TTCTCCGGTTATATGCAGTT+AGG | 0.469245 | 4.2:+4023594 | MS.gene06110:CDS |
| TGCAGATTTCCTTTCCCCAC+TGG | 0.470744 | 4.2:-4024441 | None:intergenic |
| GAGGATTCGGATCTTTGAGT+AGG | 0.478050 | 4.2:-4023168 | None:intergenic |
| ATTTCCAATACTCACATCAA+TGG | 0.480593 | 4.2:-4023970 | None:intergenic |
| CGTGAAGAAGGAGAGGGAGA+GGG | 0.481663 | 4.2:-4023231 | None:intergenic |
| TGAAGCTGCTGAATTGTTTG+AGG | 0.486297 | 4.2:+4024523 | MS.gene06110:CDS |
| CGCCTCCGCCAAATAGCGAC+AGG | 0.487480 | 4.2:-4023727 | None:intergenic |
| AAAAGCTTCAACGCTTCCTC+TGG | 0.489968 | 4.2:-4024269 | None:intergenic |
| GCAGCTTCTTCAAGAGAAGC+AGG | 0.490367 | 4.2:-4023828 | None:intergenic |
| GGTAAGGAGATTCGGGGCGG+AGG | 0.490779 | 4.2:-4023138 | None:intergenic |
| GATGGCATAGTCGAGTGCTT+TGG | 0.491407 | 4.2:-4023385 | None:intergenic |
| CAAATTCAGATCCAAACGTT+AGG | 0.491969 | 4.2:+4023678 | MS.gene06110:CDS |
| TCAATTCAATTCATCATGCC+TGG | 0.492859 | 4.2:+4023096 | None:intergenic |
| GCAACTGTACTCTGCTGTCC+AGG | 0.494600 | 4.2:-4024323 | None:intergenic |
| ACACTATCGCTTCCGGCGAT+GGG | 0.496301 | 4.2:+4023358 | MS.gene06110:CDS |
| GCTGAGTTGCTGAAAGAAGC+TGG | 0.496317 | 4.2:+4025185 | MS.gene06110:CDS |
| GCTTCCATTGATGTGAGTAT+TGG | 0.498324 | 4.2:+4023966 | MS.gene06110:CDS |
| TCGGCACCACGCTCAACATC+AGG | 0.500199 | 4.2:-4023555 | None:intergenic |
| ACTACTGCAGAGGAGATTGC+CGG | 0.502725 | 4.2:+4024203 | MS.gene06110:CDS |
| GAAGAAGGAGAGGGAGAGGG+TGG | 0.505490 | 4.2:-4023228 | None:intergenic |
| AACTTCGTTATCTTGACCGT+TGG | 0.512294 | 4.2:-4023943 | None:intergenic |
| GAGAGTAACAAGAGGTGGCC+TGG | 0.512764 | 4.2:+4025278 | MS.gene06110:CDS |
| TGCAGCTACTTACGATGCAA+TGG | 0.513646 | 4.2:+4024616 | MS.gene06110:CDS |
| TTCGGAGAGGAGAGAGTTGG+TGG | 0.514406 | 4.2:-4023283 | None:intergenic |
| AAAATATAGCTTCATCAAAA+CGG | 0.515154 | 4.2:-4024010 | None:intergenic |
| TGAATTGTTTGAGGAAGCTA+GGG | 0.515510 | 4.2:+4024532 | MS.gene06110:CDS |
| GAGACTGGGTTCACCTTCAA+CGG | 0.515665 | 4.2:-4023436 | None:intergenic |
| TTCGGGGCGGAGGTCCACCT+GGG | 0.520899 | 4.2:-4023128 | None:intergenic |
| TCTTAGAATTTACTCGAAGC+CGG | 0.521538 | 4.2:+4024172 | MS.gene06110:CDS |
| AGAATATGTGCTGAAATTGA+GGG | 0.521695 | 4.2:+4025109 | MS.gene06110:CDS |
| GAAGGAATGGACCGAGATCT+GGG | 0.529262 | 4.2:-4023320 | None:intergenic |
| ATGCCTGGTCTTGTATCCCC+AGG | 0.530020 | 4.2:+4023111 | MS.gene06110:CDS |
| GAAAGCAGCAAGAGCATGAT+CGG | 0.533567 | 4.2:-4023574 | None:intergenic |
| GCATAGTCGAGTGCTTTGGC+GGG | 0.536165 | 4.2:-4023381 | None:intergenic |
| GAAGGATTTGGAAGCGCGGA+TGG | 0.537538 | 4.2:-4023403 | None:intergenic |
| CGGGCTACTTTGAGAAGGAA+TGG | 0.538375 | 4.2:-4023333 | None:intergenic |
| GCAGCTACTTACGATGCAAT+GGG | 0.540410 | 4.2:+4024617 | MS.gene06110:CDS |
| CGCCGGAAGCGATAGTGTCG+CGG | 0.541043 | 4.2:-4023353 | None:intergenic |
| CTTGGAGCGTGAAGAAGGAG+AGG | 0.542163 | 4.2:-4023238 | None:intergenic |
| CCACCTGGGGATACAAGACC+AGG | 0.542847 | 4.2:-4023114 | None:intergenic |
| TGAAACCTGTCGCTATTTGG+CGG | 0.545497 | 4.2:+4023722 | MS.gene06110:CDS |
| TCTGCAGTAGTTCCAGGAAC+CGG | 0.546580 | 4.2:-4024191 | None:intergenic |
| TCGGGTAAGGAGATTCGGGG+CGG | 0.551979 | 4.2:-4023141 | None:intergenic |
| GGTTTCACCGACGCGTGGAT+CGG | 0.552804 | 4.2:-4023706 | None:intergenic |
| CTCATGGCGAGGTCGAGACT+GGG | 0.554197 | 4.2:-4023450 | None:intergenic |
| GGCGAAAGGTGATTATGAAT+CGG | 0.554761 | 4.2:+4023881 | MS.gene06110:CDS |
| TGCGGGGATAGAAGCACGGA+TGG | 0.555487 | 4.2:+4024343 | MS.gene06110:CDS |
| CACGCTCAACATCAGGAACA+TGG | 0.557170 | 4.2:-4023548 | None:intergenic |
| CTGATTTGTATCATAGGACA+GGG | 0.557711 | 4.2:+4024114 | MS.gene06110:CDS |
| GGAGCTTTGTAACAAAACCT+TGG | 0.561166 | 4.2:+4023782 | MS.gene06110:CDS |
| GCCGGAAGCGATAGTGTCGC+GGG | 0.567266 | 4.2:-4023352 | None:intergenic |
| AACTGAGAACCAGTGGGGAA+AGG | 0.570086 | 4.2:+4024432 | MS.gene06110:CDS |
| CTCTTGAAGAAGCTGCAGAT+CGG | 0.571252 | 4.2:+4023835 | MS.gene06110:CDS |
| TGAAACCTCGGTCAAACCAC+CGG | 0.571331 | 4.2:-4024222 | None:intergenic |
| TTCAACGGCGCAGCGTTCGA+AGG | 0.574087 | 4.2:-4023421 | None:intergenic |
| CCTTGTCATCAAGATACTCT+CGG | 0.579132 | 4.2:+4024578 | MS.gene06110:CDS |
| ACAAGAGGTGGCCTGGTTTG+GGG | 0.579756 | 4.2:+4025285 | MS.gene06110:CDS |
| GTTTCGGGTAAGGAGATTCG+GGG | 0.581165 | 4.2:-4023144 | None:intergenic |
| GGCGAGGACATGGAGGCTCA+TGG | 0.583135 | 4.2:-4023466 | None:intergenic |
| AAATTCAAAGAGGACAAAGA+AGG | 0.585661 | 4.2:+4025256 | MS.gene06110:CDS |
| GGCTTCGGAGAGGAGAGAGT+TGG | 0.588584 | 4.2:-4023286 | None:intergenic |
| TAAATTCTAAACCCCAAACC+AGG | 0.601983 | 4.2:-4025296 | None:intergenic |
| GAAGGCAATGAAATTGTTGG+AGG | 0.603285 | 4.2:+4024295 | MS.gene06110:CDS |
| CCGAGAGTATCTTGATGACA+AGG | 0.605990 | 4.2:-4024578 | None:intergenic |
| TTTCAACACAGCACTCTCAA+AGG | 0.608981 | 4.2:-4024411 | None:intergenic |
| GGATTCGGATCTTTGAGTAG+GGG | 0.610218 | 4.2:-4023166 | None:intergenic |
| AGGTGATTATGAATCGGCGT+TGG | 0.611553 | 4.2:+4023887 | MS.gene06110:CDS |
| AAATTGAGGGAAGAGAAGCT+TGG | 0.612289 | 4.2:+4025122 | MS.gene06110:CDS |
| TTGGAGCGTGAAGAAGGAGA+GGG | 0.613060 | 4.2:-4023237 | None:intergenic |
| GGAATTCTTGAACAAGAATG+TGG | 0.615719 | 4.2:+4024554 | MS.gene06110:CDS |
| ACTTATGGCGTTGATTTGTG+AGG | 0.616428 | 4.2:+4023860 | MS.gene06110:CDS |
| AGAAGGAGAGTAACAAGAGG+TGG | 0.616790 | 4.2:+4025273 | MS.gene06110:CDS |
| ACAAACACCGAAGCAACAGA+AGG | 0.618356 | 4.2:-4024083 | None:intergenic |
| GAGTGATGTATTATATGATT+GGG | 0.621428 | 4.2:+4024366 | MS.gene06110:CDS |
| ACGGTGTTTAAGTCGTCCAA+AGG | 0.621832 | 4.2:+4024050 | MS.gene06110:CDS |
| AAATTGTTGGAGGATAAACC+TGG | 0.621852 | 4.2:+4024305 | MS.gene06110:CDS |
| TCTCTCGATAACCCAGATCT+CGG | 0.624925 | 4.2:+4023309 | MS.gene06110:CDS |
| TGGACAGCAGAGTACAGTTG+CGG | 0.633649 | 4.2:+4024325 | MS.gene06110:CDS |
| GATTGCCGGTGGTTTGACCG+AGG | 0.633667 | 4.2:+4024217 | MS.gene06110:CDS |
| GAGATCTGGGTTATCGAGAG+AGG | 0.635357 | 4.2:-4023307 | None:intergenic |
| TGAATCTGTTGATGATCCAG+AGG | 0.637084 | 4.2:+4024253 | MS.gene06110:CDS |
| AACCTGTCGCTATTTGGCGG+AGG | 0.638321 | 4.2:+4023725 | MS.gene06110:CDS |
| TTATTGATCCAAATTCAAAG+AGG | 0.640431 | 4.2:+4025246 | MS.gene06110:CDS |
| TGTCGCGGGCTACTTTGAGA+AGG | 0.646398 | 4.2:-4023338 | None:intergenic |
| CCTGGTCTTGTATCCCCAGG+TGG | 0.646721 | 4.2:+4023114 | MS.gene06110:CDS |
| TCGGGGCGGAGGTCCACCTG+GGG | 0.650423 | 4.2:-4023127 | None:intergenic |
| CAGTTGCGGGGATAGAAGCA+CGG | 0.652386 | 4.2:+4024339 | MS.gene06110:CDS |
| CGACAGGTTTCACCGACGCG+TGG | 0.652996 | 4.2:-4023711 | None:intergenic |
| GGACATGGAGGCTCATGGCG+AGG | 0.654929 | 4.2:-4023461 | None:intergenic |
| CTACTTACGATGCAATGGGA+AGG | 0.657643 | 4.2:+4024621 | MS.gene06110:CDS |
| GCGGGGATAGAAGCACGGAT+GGG | 0.658266 | 4.2:+4024344 | MS.gene06110:CDS |
| ATGTGCACGATGAATCTCCA+AGG | 0.659328 | 4.2:-4023799 | None:intergenic |
| GATGCAGTTTGATAAAGCAG+AGG | 0.659355 | 4.2:+4023761 | MS.gene06110:CDS |
| GTGTTGAAACTGAGAACCAG+TGG | 0.668236 | 4.2:+4024425 | MS.gene06110:CDS |
| TATCGAGAGAGGCTTCGGAG+AGG | 0.675847 | 4.2:-4023296 | None:intergenic |
| CATGTTCCTGATGTTGAGCG+TGG | 0.676143 | 4.2:+4023549 | MS.gene06110:CDS |
| GTTCGAAGGATTTGGAAGCG+CGG | 0.680525 | 4.2:-4023407 | None:intergenic |
| ACTGCAGAGGAGATTGCCGG+TGG | 0.680924 | 4.2:+4024206 | MS.gene06110:CDS |
| GACAGCAGAGTACAGTTGCG+GGG | 0.681755 | 4.2:+4024327 | MS.gene06110:CDS |
| GGTTCCTGGAACTACTGCAG+AGG | 0.683112 | 4.2:+4024193 | MS.gene06110:CDS |
| AGTATGGCAATGATCGCCAA+CGG | 0.686660 | 4.2:+4023927 | MS.gene06110:CDS |
| TGTTGAAACTGAGAACCAGT+GGG | 0.688448 | 4.2:+4024426 | MS.gene06110:CDS |
| AAATCGCGGCGAGGACATGG+AGG | 0.690731 | 4.2:-4023473 | None:intergenic |
| GGTGAAACCGATCCACGCGT+CGG | 0.695000 | 4.2:+4023699 | MS.gene06110:CDS |
| CAAAGAAGGAGAGTAACAAG+AGG | 0.698382 | 4.2:+4025270 | MS.gene06110:CDS |
| AGCTACAGTAAATCGCGGCG+AGG | 0.710117 | 4.2:-4023482 | None:intergenic |
| TATGATTGGGAAGTACGATG+AGG | 0.711774 | 4.2:+4024379 | MS.gene06110:CDS |
| GTTTAAGCTACAGTAAATCG+CGG | 0.716838 | 4.2:-4023487 | None:intergenic |
| GCGTTGATTTGTGAGGCGAA+AGG | 0.719934 | 4.2:+4023867 | MS.gene06110:CDS |
| GAATTGTTTGAGGAAGCTAG+GGG | 0.741462 | 4.2:+4024533 | MS.gene06110:CDS |
| GTTGAAACTGAGAACCAGTG+GGG | 0.823327 | 4.2:+4024427 | MS.gene06110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAGCTTCATCAAAA+CGG | - | chr4.2:4024013-4024032 | None:intergenic | 20.0% |
| !! | TAAGATTGTTAAAAAGAGAA+AGG | - | chr4.2:4024660-4024679 | None:intergenic | 20.0% |
| ! | ACTAAATTGTTTATCCAAAC+CGG | - | chr4.2:4024703-4024722 | None:intergenic | 25.0% |
| ! | ATAAACAAGACCTTATCTTA+GGG | - | chr4.2:4024746-4024765 | None:intergenic | 25.0% |
| ! | GAGTGATGTATTATATGATT+GGG | + | chr4.2:4024366-4024385 | MS.gene06110:CDS | 25.0% |
| ! | TATAAACAAGACCTTATCTT+AGG | - | chr4.2:4024747-4024766 | None:intergenic | 25.0% |
| ! | TCCTTGATCATACATTAAAA+TGG | - | chr4.2:4023655-4023674 | None:intergenic | 25.0% |
| ! | TTATTGATCCAAATTCAAAG+AGG | + | chr4.2:4025246-4025265 | MS.gene06110:CDS | 25.0% |
| ! | TTTATAACAAGTGCATAAGT+TGG | - | chr4.2:4024927-4024946 | None:intergenic | 25.0% |
| !!! | TCCATTTTAATGTATGATCA+AGG | + | chr4.2:4023651-4023670 | MS.gene06110:CDS | 25.0% |
| AAATTCAAAGAGGACAAAGA+AGG | + | chr4.2:4025256-4025275 | MS.gene06110:CDS | 30.0% | |
| AGAATATGTGCTGAAATTGA+GGG | + | chr4.2:4025109-4025128 | MS.gene06110:CDS | 30.0% | |
| ATTTCCAATACTCACATCAA+TGG | - | chr4.2:4023973-4023992 | None:intergenic | 30.0% | |
| CTAAATTGTTTATCCAAACC+GGG | - | chr4.2:4024702-4024721 | None:intergenic | 30.0% | |
| GGAGTGATGTATTATATGAT+TGG | + | chr4.2:4024365-4024384 | MS.gene06110:CDS | 30.0% | |
| GTTTGATTCAATATTATGCC+CGG | + | chr4.2:4024681-4024700 | MS.gene06110:intron | 30.0% | |
| TAAACAAGACCTTATCTTAG+GGG | - | chr4.2:4024745-4024764 | None:intergenic | 30.0% | |
| TAGAATATGTGCTGAAATTG+AGG | + | chr4.2:4025108-4025127 | MS.gene06110:CDS | 30.0% | |
| TTCTTTGTCCTCTTTGAATT+TGG | - | chr4.2:4025257-4025276 | None:intergenic | 30.0% | |
| !! | GTTTAGCTGATTTGTATCAT+AGG | + | chr4.2:4024108-4024127 | MS.gene06110:CDS | 30.0% |
| !!! | GAAAGGAAATCTGCATTTTT+TGG | + | chr4.2:4024449-4024468 | MS.gene06110:CDS | 30.0% |
| AAATTGTTGGAGGATAAACC+TGG | + | chr4.2:4024305-4024324 | MS.gene06110:CDS | 35.0% | |
| AAGCACTAGTGAAATTCTTC+TGG | - | chr4.2:4024968-4024987 | None:intergenic | 35.0% | |
| AGACAGAAAAGCAAAGTCTT+TGG | + | chr4.2:4025217-4025236 | MS.gene06110:CDS | 35.0% | |
| ATTCAATATTATGCCCGGTT+TGG | + | chr4.2:4024686-4024705 | MS.gene06110:intron | 35.0% | |
| ATTTCACTAGTGCTTATGTG+TGG | + | chr4.2:4024973-4024992 | MS.gene06110:intron | 35.0% | |
| CAAATTCAGATCCAAACGTT+AGG | + | chr4.2:4023678-4023697 | MS.gene06110:CDS | 35.0% | |
| GGAATTCTTGAACAAGAATG+TGG | + | chr4.2:4024554-4024573 | MS.gene06110:CDS | 35.0% | |
| GTGATGATATGATTCAGAGT+TGG | + | chr4.2:4025068-4025087 | MS.gene06110:intron | 35.0% | |
| GTTTAAGCTACAGTAAATCG+CGG | - | chr4.2:4023490-4023509 | None:intergenic | 35.0% | |
| TAAATTCTAAACCCCAAACC+AGG | - | chr4.2:4025299-4025318 | None:intergenic | 35.0% | |
| TAGTATAAGCCCCTAAGATA+AGG | + | chr4.2:4024733-4024752 | MS.gene06110:intron | 35.0% | |
| TCTTAGAATTTACTCGAAGC+CGG | + | chr4.2:4024172-4024191 | MS.gene06110:CDS | 35.0% | |
| TGAATTGTTTGAGGAAGCTA+GGG | + | chr4.2:4024532-4024551 | MS.gene06110:CDS | 35.0% | |
| TTCAAATATCGCTGAAACCT+CGG | - | chr4.2:4024237-4024256 | None:intergenic | 35.0% | |
| ! | AAATCATCCTTCTGTTGCTT+CGG | + | chr4.2:4024076-4024095 | MS.gene06110:CDS | 35.0% |
| ! | AGAAGGATGATTTTCACCTT+TGG | - | chr4.2:4024069-4024088 | None:intergenic | 35.0% |
| ! | CTGATTTGTATCATAGGACA+GGG | + | chr4.2:4024114-4024133 | MS.gene06110:CDS | 35.0% |
| !! | TGTTTTGAATCAGATGGGAT+TGG | + | chr4.2:4024475-4024494 | MS.gene06110:CDS | 35.0% |
| !! | TTCTTATCAGAAAGCGCTTA+CGG | + | chr4.2:4024031-4024050 | MS.gene06110:CDS | 35.0% |
| !!! | GGTGTTGTTTTGAATCAGAT+GGG | + | chr4.2:4024470-4024489 | MS.gene06110:CDS | 35.0% |
| !!! | TGGTGTTGTTTTGAATCAGA+TGG | + | chr4.2:4024469-4024488 | MS.gene06110:CDS | 35.0% |
| AAATTGAGGGAAGAGAAGCT+TGG | + | chr4.2:4025122-4025141 | MS.gene06110:CDS | 40.0% | |
| AACTTCGTTATCTTGACCGT+TGG | - | chr4.2:4023946-4023965 | None:intergenic | 40.0% | |
| AGGATTCGGATCTTTGAGTA+GGG | - | chr4.2:4023170-4023189 | None:intergenic | 40.0% | |
| CAAAGAAGGAGAGTAACAAG+AGG | + | chr4.2:4025270-4025289 | MS.gene06110:CDS | 40.0% | |
| CCTTGTCATCAAGATACTCT+CGG | + | chr4.2:4024578-4024597 | MS.gene06110:CDS | 40.0% | |
| CGCTTCTCATCTTCAAAATC+AGG | - | chr4.2:4025158-4025177 | None:intergenic | 40.0% | |
| CTGAATTGTTTGAGGAAGCT+AGG | + | chr4.2:4024531-4024550 | MS.gene06110:CDS | 40.0% | |
| GAAGGCAATGAAATTGTTGG+AGG | + | chr4.2:4024295-4024314 | MS.gene06110:CDS | 40.0% | |
| GAATTGTTTGAGGAAGCTAG+GGG | + | chr4.2:4024533-4024552 | MS.gene06110:CDS | 40.0% | |
| GATGCAGTTTGATAAAGCAG+AGG | + | chr4.2:4023761-4023780 | MS.gene06110:CDS | 40.0% | |
| GCAGAAGGCAATGAAATTGT+TGG | + | chr4.2:4024292-4024311 | MS.gene06110:CDS | 40.0% | |
| GCTTCCATTGATGTGAGTAT+TGG | + | chr4.2:4023966-4023985 | MS.gene06110:CDS | 40.0% | |
| GGCGAAAGGTGATTATGAAT+CGG | + | chr4.2:4023881-4023900 | MS.gene06110:CDS | 40.0% | |
| GTCACCTAACTGCATATAAC+CGG | - | chr4.2:4023601-4023620 | None:intergenic | 40.0% | |
| TGAAGCTGCTGAATTGTTTG+AGG | + | chr4.2:4024523-4024542 | MS.gene06110:CDS | 40.0% | |
| TGTTGAAACTGAGAACCAGT+GGG | + | chr4.2:4024426-4024445 | MS.gene06110:CDS | 40.0% | |
| TTCTCCGGTTATATGCAGTT+AGG | + | chr4.2:4023594-4023613 | MS.gene06110:CDS | 40.0% | |
| TTTCAACACAGCACTCTCAA+AGG | - | chr4.2:4024414-4024433 | None:intergenic | 40.0% | |
| ! | GGAGCTTTGTAACAAAACCT+TGG | + | chr4.2:4023782-4023801 | MS.gene06110:CDS | 40.0% |
| ! | TATGATTGGGAAGTACGATG+AGG | + | chr4.2:4024379-4024398 | MS.gene06110:CDS | 40.0% |
| ! | TTTTTCTTGGAGCGTGAAGA+AGG | - | chr4.2:4023246-4023265 | None:intergenic | 40.0% |
| !! | ACTTATGGCGTTGATTTGTG+AGG | + | chr4.2:4023860-4023879 | MS.gene06110:CDS | 40.0% |
| !! | GCTGATTTGTATCATAGGAC+AGG | + | chr4.2:4024113-4024132 | MS.gene06110:CDS | 40.0% |
| !! | TGAATCTGTTGATGATCCAG+AGG | + | chr4.2:4024253-4024272 | MS.gene06110:CDS | 40.0% |
| !!! | GAGAGGGTGGTTTTTTGTTA+GGG | - | chr4.2:4023218-4023237 | None:intergenic | 40.0% |
| !!! | GGTGACACTTTTTCGATGTT+AGG | + | chr4.2:4023615-4023634 | MS.gene06110:CDS | 40.0% |
| !!! | GGTTTCGGGTGTTTTTTTCT+TGG | - | chr4.2:4023259-4023278 | None:intergenic | 40.0% |
| AAAAGCTTCAACGCTTCCTC+TGG | - | chr4.2:4024272-4024291 | None:intergenic | 45.0% | |
| ACAAACACCGAAGCAACAGA+AGG | - | chr4.2:4024086-4024105 | None:intergenic | 45.0% | |
| ACGGTGTTTAAGTCGTCCAA+AGG | + | chr4.2:4024050-4024069 | MS.gene06110:CDS | 45.0% | |
| AGAAGGAGAGTAACAAGAGG+TGG | + | chr4.2:4025273-4025292 | MS.gene06110:CDS | 45.0% | |
| AGGTGATTATGAATCGGCGT+TGG | + | chr4.2:4023887-4023906 | MS.gene06110:CDS | 45.0% | |
| AGTATGGCAATGATCGCCAA+CGG | + | chr4.2:4023927-4023946 | MS.gene06110:CDS | 45.0% | |
| ATGTGCACGATGAATCTCCA+AGG | - | chr4.2:4023802-4023821 | None:intergenic | 45.0% | |
| CAGGAACAGCTTCTTCGAAT+CGG | - | chr4.2:4023512-4023531 | None:intergenic | 45.0% | |
| CTACTTACGATGCAATGGGA+AGG | + | chr4.2:4024621-4024640 | MS.gene06110:CDS | 45.0% | |
| CTCTTGAAGAAGCTGCAGAT+CGG | + | chr4.2:4023835-4023854 | MS.gene06110:CDS | 45.0% | |
| GAGGATTCGGATCTTTGAGT+AGG | - | chr4.2:4023171-4023190 | None:intergenic | 45.0% | |
| GATCTTTGAGTAGGGGTTTC+GGG | - | chr4.2:4023162-4023181 | None:intergenic | 45.0% | |
| GCAGCTACTTACGATGCAAT+GGG | + | chr4.2:4024617-4024636 | MS.gene06110:CDS | 45.0% | |
| GGATCTTTGAGTAGGGGTTT+CGG | - | chr4.2:4023163-4023182 | None:intergenic | 45.0% | |
| GGATTCGGATCTTTGAGTAG+GGG | - | chr4.2:4023169-4023188 | None:intergenic | 45.0% | |
| GTGTTGAAACTGAGAACCAG+TGG | + | chr4.2:4024425-4024444 | MS.gene06110:CDS | 45.0% | |
| GTTGAAACTGAGAACCAGTG+GGG | + | chr4.2:4024427-4024446 | MS.gene06110:CDS | 45.0% | |
| TCTCTCGATAACCCAGATCT+CGG | + | chr4.2:4023309-4023328 | MS.gene06110:CDS | 45.0% | |
| TGAAACCTGTCGCTATTTGG+CGG | + | chr4.2:4023722-4023741 | MS.gene06110:CDS | 45.0% | |
| TGCAGCTACTTACGATGCAA+TGG | + | chr4.2:4024616-4024635 | MS.gene06110:CDS | 45.0% | |
| TTTGTTAGGGAGGGGTGATT+GGG | - | chr4.2:4023205-4023224 | None:intergenic | 45.0% | |
| ! | GAAAGCAGCAAGAGCATGAT+CGG | - | chr4.2:4023577-4023596 | None:intergenic | 45.0% |
| ! | GATCGGTTTCACCTAACGTT+TGG | - | chr4.2:4023692-4023711 | None:intergenic | 45.0% |
| ! | TTTTGTTAGGGAGGGGTGAT+TGG | - | chr4.2:4023206-4023225 | None:intergenic | 45.0% |
| !! | AGCGTTGAAGCTTTTGCAGA+AGG | + | chr4.2:4024277-4024296 | MS.gene06110:CDS | 45.0% |
| !! | CCGAGAGTATCTTGATGACA+AGG | - | chr4.2:4024581-4024600 | None:intergenic | 45.0% |
| !!! | AGGGTGGTTTTTTGTTAGGG+AGG | - | chr4.2:4023215-4023234 | None:intergenic | 45.0% |
| !!! | GGAGAGGGTGGTTTTTTGTT+AGG | - | chr4.2:4023219-4023238 | None:intergenic | 45.0% |
| !!! | GGGTGGTTTTTTGTTAGGGA+GGG | - | chr4.2:4023214-4023233 | None:intergenic | 45.0% |
| !!! | GGTGGTTTTTTGTTAGGGAG+GGG | - | chr4.2:4023213-4023232 | None:intergenic | 45.0% |
| !!! | GGTTGGTGTTTTGGAGGATT+CGG | - | chr4.2:4023184-4023203 | None:intergenic | 45.0% |
| !!! | TGATTGGGTTGGTGTTTTGG+AGG | - | chr4.2:4023190-4023209 | None:intergenic | 45.0% |
| AACAAGAGGTGGCCTGGTTT+GGG | + | chr4.2:4025284-4025303 | MS.gene06110:CDS | 50.0% | |
| AACTGAGAACCAGTGGGGAA+AGG | + | chr4.2:4024432-4024451 | MS.gene06110:CDS | 50.0% | |
| ACTACTGCAGAGGAGATTGC+CGG | + | chr4.2:4024203-4024222 | MS.gene06110:CDS | 50.0% | |
| AGAAGGAATGGACCGAGATC+TGG | - | chr4.2:4023324-4023343 | None:intergenic | 50.0% | |
| AGCTGCAGATCGGAGACTTA+TGG | + | chr4.2:4023845-4023864 | MS.gene06110:CDS | 50.0% | |
| ATCTCCTCTGCAGTAGTTCC+AGG | - | chr4.2:4024200-4024219 | None:intergenic | 50.0% | |
| CACGCTCAACATCAGGAACA+TGG | - | chr4.2:4023551-4023570 | None:intergenic | 50.0% | |
| CATGTTCCTGATGTTGAGCG+TGG | + | chr4.2:4023549-4023568 | MS.gene06110:CDS | 50.0% | |
| CGGTGAAACCTGTCGCTATT+TGG | + | chr4.2:4023719-4023738 | MS.gene06110:CDS | 50.0% | |
| GAAGGAATGGACCGAGATCT+GGG | - | chr4.2:4023323-4023342 | None:intergenic | 50.0% | |
| GAGACTGGGTTCACCTTCAA+CGG | - | chr4.2:4023439-4023458 | None:intergenic | 50.0% | |
| GAGATCTGGGTTATCGAGAG+AGG | - | chr4.2:4023310-4023329 | None:intergenic | 50.0% | |
| GATGGCATAGTCGAGTGCTT+TGG | - | chr4.2:4023388-4023407 | None:intergenic | 50.0% | |
| GCAGCTTCTTCAAGAGAAGC+AGG | - | chr4.2:4023831-4023850 | None:intergenic | 50.0% | |
| GCATCTTGTTCTGGCGAGTA+TGG | + | chr4.2:4023911-4023930 | MS.gene06110:CDS | 50.0% | |
| GCTGAGTTGCTGAAAGAAGC+TGG | + | chr4.2:4025185-4025204 | MS.gene06110:CDS | 50.0% | |
| GTTCGAAGGATTTGGAAGCG+CGG | - | chr4.2:4023410-4023429 | None:intergenic | 50.0% | |
| TAACAAGAGGTGGCCTGGTT+TGG | + | chr4.2:4025283-4025302 | MS.gene06110:CDS | 50.0% | |
| TCTGCAGTAGTTCCAGGAAC+CGG | - | chr4.2:4024194-4024213 | None:intergenic | 50.0% | |
| TGAAACCTCGGTCAAACCAC+CGG | - | chr4.2:4024225-4024244 | None:intergenic | 50.0% | |
| TGCAGATTTCCTTTCCCCAC+TGG | - | chr4.2:4024444-4024463 | None:intergenic | 50.0% | |
| TGGACAGCAGAGTACAGTTG+CGG | + | chr4.2:4024325-4024344 | MS.gene06110:CDS | 50.0% | |
| TGGGTTATCGAGAGAGGCTT+CGG | - | chr4.2:4023304-4023323 | None:intergenic | 50.0% | |
| TTGGAGCGTGAAGAAGGAGA+GGG | - | chr4.2:4023240-4023259 | None:intergenic | 50.0% | |
| ! | ATTTACTCGAAGCCGGTTCC+TGG | + | chr4.2:4024179-4024198 | MS.gene06110:CDS | 50.0% |
| ! | CGGGCTACTTTGAGAAGGAA+TGG | - | chr4.2:4023336-4023355 | None:intergenic | 50.0% |
| ! | GGGTTTCGGGTAAGGAGATT+CGG | - | chr4.2:4023149-4023168 | None:intergenic | 50.0% |
| ! | GGTTTCGGGTAAGGAGATTC+GGG | - | chr4.2:4023148-4023167 | None:intergenic | 50.0% |
| ! | GTTTCGGGTAAGGAGATTCG+GGG | - | chr4.2:4023147-4023166 | None:intergenic | 50.0% |
| ! | TTGAGTAGGGGTTTCGGGTA+AGG | - | chr4.2:4023157-4023176 | None:intergenic | 50.0% |
| !! | AGAGGAGAGAGTTGGTGGTT+GGG | - | chr4.2:4023281-4023300 | None:intergenic | 50.0% |
| !! | AGAGTTGGTGGTTGGGGTTT+CGG | - | chr4.2:4023274-4023293 | None:intergenic | 50.0% |
| !! | CATGCTCTTGCTGCTTTCTC+CGG | + | chr4.2:4023579-4023598 | MS.gene06110:CDS | 50.0% |
| !! | GCGTTGATTTGTGAGGCGAA+AGG | + | chr4.2:4023867-4023886 | MS.gene06110:CDS | 50.0% |
| !!! | GGGTGATTGGGTTGGTGTTT+TGG | - | chr4.2:4023193-4023212 | None:intergenic | 50.0% |
| AACCTGTCGCTATTTGGCGG+AGG | + | chr4.2:4023725-4023744 | MS.gene06110:CDS | 55.0% | |
| ACACTATCGCTTCCGGCGAT+GGG | + | chr4.2:4023358-4023377 | MS.gene06110:CDS | 55.0% | |
| AGCTACAGTAAATCGCGGCG+AGG | - | chr4.2:4023485-4023504 | None:intergenic | 55.0% | |
| AGTAAATCGCGGCGAGGACA+TGG | - | chr4.2:4023479-4023498 | None:intergenic | 55.0% | |
| CAGTTGCGGGGATAGAAGCA+CGG | + | chr4.2:4024339-4024358 | MS.gene06110:CDS | 55.0% | |
| CGTGAAGAAGGAGAGGGAGA+GGG | - | chr4.2:4023234-4023253 | None:intergenic | 55.0% | |
| CTTGGAGCGTGAAGAAGGAG+AGG | - | chr4.2:4023241-4023260 | None:intergenic | 55.0% | |
| GACAGCAGAGTACAGTTGCG+GGG | + | chr4.2:4024327-4024346 | MS.gene06110:CDS | 55.0% | |
| GAGAGTAACAAGAGGTGGCC+TGG | + | chr4.2:4025278-4025297 | MS.gene06110:CDS | 55.0% | |
| GCAACTGTACTCTGCTGTCC+AGG | - | chr4.2:4024326-4024345 | None:intergenic | 55.0% | |
| GCATAGTCGAGTGCTTTGGC+GGG | - | chr4.2:4023384-4023403 | None:intergenic | 55.0% | |
| GGACAGCAGAGTACAGTTGC+GGG | + | chr4.2:4024326-4024345 | MS.gene06110:CDS | 55.0% | |
| GGCATAGTCGAGTGCTTTGG+CGG | - | chr4.2:4023385-4023404 | None:intergenic | 55.0% | |
| GGTTCCTGGAACTACTGCAG+AGG | + | chr4.2:4024193-4024212 | MS.gene06110:CDS | 55.0% | |
| TATCGAGAGAGGCTTCGGAG+AGG | - | chr4.2:4023299-4023318 | None:intergenic | 55.0% | |
| TTAGGGAGGGGTGATTGGGT+TGG | - | chr4.2:4023201-4023220 | None:intergenic | 55.0% | |
| TTCGGAGAGGAGAGAGTTGG+TGG | - | chr4.2:4023286-4023305 | None:intergenic | 55.0% | |
| TTTGGCGGAGGCGAATGTTC+AGG | + | chr4.2:4023737-4023756 | MS.gene06110:CDS | 55.0% | |
| ! | ACAAGAGGTGGCCTGGTTTG+GGG | + | chr4.2:4025285-4025304 | MS.gene06110:CDS | 55.0% |
| ! | GAAGGATTTGGAAGCGCGGA+TGG | - | chr4.2:4023406-4023425 | None:intergenic | 55.0% |
| ! | GGCGTTGGAGCATCTTGTTC+TGG | + | chr4.2:4023902-4023921 | MS.gene06110:CDS | 55.0% |
| ! | TGTCGCGGGCTACTTTGAGA+AGG | - | chr4.2:4023341-4023360 | None:intergenic | 55.0% |
| !! | ATGCCTGGTCTTGTATCCCC+AGG | + | chr4.2:4023111-4023130 | MS.gene06110:CDS | 55.0% |
| !! | GAGAGGAGAGAGTTGGTGGT+TGG | - | chr4.2:4023282-4023301 | None:intergenic | 55.0% |
| !! | GAGGAGAGAGTTGGTGGTTG+GGG | - | chr4.2:4023280-4023299 | None:intergenic | 55.0% |
| !! | GAGTTGGTGGTTGGGGTTTC+GGG | - | chr4.2:4023273-4023292 | None:intergenic | 55.0% |
| AAATCGCGGCGAGGACATGG+AGG | - | chr4.2:4023476-4023495 | None:intergenic | 60.0% | |
| ACTGCAGAGGAGATTGCCGG+TGG | + | chr4.2:4024206-4024225 | MS.gene06110:CDS | 60.0% | |
| CCACCTGGGGATACAAGACC+AGG | - | chr4.2:4023117-4023136 | None:intergenic | 60.0% | |
| CTCATGGCGAGGTCGAGACT+GGG | - | chr4.2:4023453-4023472 | None:intergenic | 60.0% | |
| GAAGAAGGAGAGGGAGAGGG+TGG | - | chr4.2:4023231-4023250 | None:intergenic | 60.0% | |
| GACACTATCGCTTCCGGCGA+TGG | + | chr4.2:4023357-4023376 | MS.gene06110:CDS | 60.0% | |
| GATTGCCGGTGGTTTGACCG+AGG | + | chr4.2:4024217-4024236 | MS.gene06110:CDS | 60.0% | |
| GCGTGAAGAAGGAGAGGGAG+AGG | - | chr4.2:4023235-4023254 | None:intergenic | 60.0% | |
| GGCGCAGCGTTCGAAGGATT+TGG | - | chr4.2:4023418-4023437 | None:intergenic | 60.0% | |
| GGCTTCGGAGAGGAGAGAGT+TGG | - | chr4.2:4023289-4023308 | None:intergenic | 60.0% | |
| GGTGAAACCGATCCACGCGT+CGG | + | chr4.2:4023699-4023718 | MS.gene06110:CDS | 60.0% | |
| GGTTTCACCGACGCGTGGAT+CGG | - | chr4.2:4023709-4023728 | None:intergenic | 60.0% | |
| TCGGCACCACGCTCAACATC+AGG | - | chr4.2:4023558-4023577 | None:intergenic | 60.0% | |
| TCGGGTAAGGAGATTCGGGG+CGG | - | chr4.2:4023144-4023163 | None:intergenic | 60.0% | |
| TGGATCGCGCGTTCGAGAAC+AGG | - | chr4.2:4023531-4023550 | None:intergenic | 60.0% | |
| TTCAACGGCGCAGCGTTCGA+AGG | - | chr4.2:4023424-4023443 | None:intergenic | 60.0% | |
| TTCGAACGCTGCGCCGTTGA+AGG | + | chr4.2:4023423-4023442 | MS.gene06110:CDS | 60.0% | |
| ! | GCGGGGATAGAAGCACGGAT+GGG | + | chr4.2:4024344-4024363 | MS.gene06110:CDS | 60.0% |
| ! | TGCGGGGATAGAAGCACGGA+TGG | + | chr4.2:4024343-4024362 | MS.gene06110:CDS | 60.0% |
| !! | CCTGGTCTTGTATCCCCAGG+TGG | + | chr4.2:4023114-4023133 | MS.gene06110:CDS | 60.0% |
| CGACAGGTTTCACCGACGCG+TGG | - | chr4.2:4023714-4023733 | None:intergenic | 65.0% | |
| CGCCGGAAGCGATAGTGTCG+CGG | - | chr4.2:4023356-4023375 | None:intergenic | 65.0% | |
| CGCCTCCGCCAAATAGCGAC+AGG | - | chr4.2:4023730-4023749 | None:intergenic | 65.0% | |
| GCCCGCGACACTATCGCTTC+CGG | + | chr4.2:4023351-4023370 | MS.gene06110:CDS | 65.0% | |
| GCCGGAAGCGATAGTGTCGC+GGG | - | chr4.2:4023355-4023374 | None:intergenic | 65.0% | |
| GCTCATGGCGAGGTCGAGAC+TGG | - | chr4.2:4023454-4023473 | None:intergenic | 65.0% | |
| GGACATGGAGGCTCATGGCG+AGG | - | chr4.2:4023464-4023483 | None:intergenic | 65.0% | |
| GGCGAGGACATGGAGGCTCA+TGG | - | chr4.2:4023469-4023488 | None:intergenic | 65.0% | |
| GGTAAGGAGATTCGGGGCGG+AGG | - | chr4.2:4023141-4023160 | None:intergenic | 65.0% | |
| ATTCGGGGCGGAGGTCCACC+TGG | - | chr4.2:4023132-4023151 | None:intergenic | 70.0% | |
| TTCGGGGCGGAGGTCCACCT+GGG | - | chr4.2:4023131-4023150 | None:intergenic | 70.0% | |
| ! | TGCTTTGGCGGGCCCATCGC+CGG | - | chr4.2:4023373-4023392 | None:intergenic | 70.0% |
| TCGGGGCGGAGGTCCACCTG+GGG | - | chr4.2:4023130-4023149 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 4023111 | 4025319 | 4023111 | ID=MS.gene06110 |
| chr4.2 | mRNA | 4023111 | 4025319 | 4023111 | ID=MS.gene06110.t1;Parent=MS.gene06110 |
| chr4.2 | exon | 4023111 | 4024642 | 4023111 | ID=MS.gene06110.t1.exon1;Parent=MS.gene06110.t1 |
| chr4.2 | CDS | 4023111 | 4024642 | 4023111 | ID=cds.MS.gene06110.t1;Parent=MS.gene06110.t1 |
| chr4.2 | exon | 4025085 | 4025319 | 4025085 | ID=MS.gene06110.t1.exon2;Parent=MS.gene06110.t1 |
| chr4.2 | CDS | 4025085 | 4025319 | 4025085 | ID=cds.MS.gene06110.t1;Parent=MS.gene06110.t1 |
| Gene Sequence |
| Protein sequence |
