AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene47297

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47297.t1 MTR_6g027660 87.637 639 57 4 1 627 1 629 0.0 1105
MS.gene47297.t1 MTR_6g027680 94.783 575 30 0 1 575 1 575 0.0 1098
MS.gene47297.t1 MTR_6g027630 84.554 628 77 4 9 619 1 625 0.0 1061
MS.gene47297.t1 MTR_6g027650 83.119 622 90 4 9 619 1 618 0.0 1039
MS.gene47297.t1 MTR_6g027630 85.445 584 66 3 9 575 1 582 0.0 994
MS.gene47297.t1 MTR_6g027630 84.899 543 67 3 89 619 1 540 0.0 926
MS.gene47297.t1 MTR_7g086610 70.936 609 165 3 17 616 3 608 0.0 850
MS.gene47297.t1 MTR_7g086510 58.882 608 229 4 28 616 21 626 0.0 727
MS.gene47297.t1 MTR_6g027670 94.040 302 18 0 274 575 5 306 0.0 574
MS.gene47297.t1 MTR_7g007850 31.561 602 343 11 26 602 22 579 9.24e-82 269
MS.gene47297.t1 MTR_7g007850 33.558 593 313 14 26 602 22 549 4.01e-81 266
MS.gene47297.t1 MTR_7g007850 37.500 416 237 7 26 427 22 428 9.30e-76 251
MS.gene47297.t1 MTR_7g007850 37.500 416 237 7 26 427 22 428 9.67e-76 250
MS.gene47297.t1 MTR_1g030660 36.364 396 231 6 38 427 61 441 2.98e-73 247
MS.gene47297.t1 MTR_8g089320 34.112 428 267 4 7 427 27 446 1.05e-72 245
MS.gene47297.t1 MTR_2g035430 32.407 432 276 5 3 427 24 446 9.65e-67 229
MS.gene47297.t1 MTR_1g111740 33.017 421 267 4 14 428 23 434 6.27e-66 226
MS.gene47297.t1 MTR_8g089360 33.744 406 256 4 26 427 38 434 5.65e-63 219
MS.gene47297.t1 MTR_8g089360 33.744 406 256 4 26 427 55 451 6.98e-63 219
MS.gene47297.t1 MTR_8g461380 31.773 406 261 4 31 427 55 453 3.47e-57 203
MS.gene47297.t1 MTR_4g099270 33.416 404 257 4 36 432 12 410 1.63e-54 195
MS.gene47297.t1 MTR_4g099270 34.366 355 226 3 36 388 33 382 1.69e-47 172
MS.gene47297.t1 MTR_8g089340 33.007 306 196 3 123 427 1 298 1.63e-41 157
MS.gene47297.t1 MTR_4g099270 32.343 303 193 4 137 432 1 298 1.49e-37 145
MS.gene47297.t1 MTR_4g099270 33.117 308 193 4 14 313 5 307 1.75e-34 133
MS.gene47297.t1 MTR_8g089342 35.965 114 67 1 7 114 28 141 1.82e-15 74.3
MS.gene47297.t1 MTR_6g034535 34.906 106 65 1 326 427 69 174 5.06e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene47297.t1 AT1G58030 63.823 633 204 5 1 616 1 625 0.0 810
MS.gene47297.t1 AT5G36940 63.158 608 212 4 26 625 5 608 0.0 757
MS.gene47297.t1 AT3G03720 60.570 596 228 3 28 619 4 596 0.0 735
MS.gene47297.t1 AT1G05940 38.325 394 230 4 39 426 41 427 1.93e-78 258
MS.gene47297.t1 AT1G05940 38.325 394 230 4 39 426 41 427 9.49e-78 257
MS.gene47297.t1 AT1G05940 38.325 394 230 4 39 426 41 427 3.20e-77 256
MS.gene47297.t1 AT4G21120 34.491 432 267 6 3 427 22 444 3.55e-76 254
MS.gene47297.t1 AT5G04770 34.140 413 260 4 28 429 32 443 6.90e-70 237
MS.gene47297.t1 AT2G34960 32.045 440 280 7 3 434 16 444 3.17e-69 235
MS.gene47297.t1 AT3G10600 34.772 394 244 4 43 428 53 441 4.96e-67 229
MS.gene47297.t1 AT1G17120 29.950 404 274 4 26 427 59 455 1.03e-59 210
MS.gene47297.t1 AT5G04770 33.424 368 233 4 28 384 32 398 2.25e-59 204
MS.gene47297.t1 AT1G05940 34.713 314 194 2 118 426 2 309 9.62e-52 185
MS.gene47297.t1 AT3G10600 32.667 300 189 4 137 428 1 295 4.31e-48 174
MS.gene47297.t1 AT4G21120 33.898 295 186 4 134 427 8 294 9.31e-48 174
MS.gene47297.t1 AT5G04770 32.997 297 194 3 137 429 1 296 2.07e-44 164

Find 143 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTTACCACTTTCATTTA+TGG 0.087114 6.4:-2846053 MS.gene47297:CDS
CATAGTAGCTGGTGGTTATT+TGG 0.112345 6.4:-2844545 MS.gene47297:CDS
TGTGATTAGGCTGCACTTAT+TGG 0.223900 6.4:-2845343 MS.gene47297:intron
CCACTTTCATTTATGGTTGC+TGG 0.262547 6.4:-2846046 MS.gene47297:CDS
AGACCCACTTTCAGCAATTA+TGG 0.269802 6.4:-2845257 MS.gene47297:CDS
GCCATAGCCATCAAGATTCT+TGG 0.280764 6.4:+2840865 None:intergenic
GTTATTGTTTATGCATTCTA+TGG 0.300085 6.4:-2837661 MS.gene47297:CDS
TGCAGGGTTGCTTGGTTGAT+TGG 0.311623 6.4:-2845614 MS.gene47297:intron
TTAAAATGACTATACCAAAT+TGG 0.317789 6.4:+2845532 None:intergenic
TAAAATGACTATACCAAATT+GGG 0.317977 6.4:+2845533 None:intergenic
TGGTCCTTAGTATTGGAATA+TGG 0.326272 6.4:-2845590 MS.gene47297:CDS
GGGGTAGATGGAATGGTTGC+TGG 0.328286 6.4:-2844379 MS.gene47297:CDS
CAGCAAAAGCAGAAGATATA+GGG 0.338436 6.4:+2843542 None:intergenic
ATGGATGTCTCTCAACTTGC+CGG 0.345790 6.4:-2840733 MS.gene47297:CDS
GTAACTATGGTACTCTTAAC+AGG 0.356512 6.4:+2840787 None:intergenic
TCAGTTAGATTTACATTATG+TGG 0.359468 6.4:-2839335 MS.gene47297:CDS
ATAGTATCAATTGTTGTTGT+TGG 0.363892 6.4:-2843598 MS.gene47297:CDS
GAGGGTAGTGGTAGTAACTA+TGG 0.370221 6.4:-2847107 MS.gene47297:CDS
TCATATTTACTTATTAGTCT+TGG 0.370811 6.4:-2839086 MS.gene47297:CDS
AAAAGATACAGTTTATTTGA+AGG 0.374602 6.4:-2837620 MS.gene47297:CDS
ATAGTAGCTGGTGGTTATTT+GGG 0.375685 6.4:-2844544 MS.gene47297:CDS
CTTCTTCAGCATATCTTCTC+AGG 0.376986 6.4:-2839789 MS.gene47297:intron
CAGATGTGCATAGTGGTAAT+AGG 0.377198 6.4:-2839876 MS.gene47297:CDS
CTCTCAGCCAAGAATCTTGA+TGG 0.378171 6.4:-2840872 MS.gene47297:intron
CCCAGTGGCAAATCTCTTTG+AGG 0.378470 6.4:+2843661 None:intergenic
GCAGAAGATATAGGGGTGTT+AGG 0.379653 6.4:+2843550 None:intergenic
GTAATAGCATTCATATGTTT+AGG 0.380169 6.4:-2839835 MS.gene47297:CDS
CATATTTACTTATTAGTCTT+GGG 0.380627 6.4:-2839085 MS.gene47297:intron
GGATTCAAAACTGGATGGAT+TGG 0.383019 6.4:-2844523 MS.gene47297:CDS
GGAGTATGGTTGGAGCCATT+TGG 0.387457 6.4:-2840360 MS.gene47297:CDS
GGTTATTTGGGATTCAAAAC+TGG 0.389451 6.4:-2844532 MS.gene47297:CDS
ACAGCAAAAGCAGAAGATAT+AGG 0.392648 6.4:+2843541 None:intergenic
CATCTTGATCTATACATGTT+AGG 0.395167 6.4:+2839276 None:intergenic
GTTACTTGGATTCTATGTAC+TGG 0.399157 6.4:-2845226 MS.gene47297:CDS
CACTATGCTTATATTTGTCT+TGG 0.401199 6.4:-2845950 MS.gene47297:CDS
AGGTGCTGGTGTATATGTTT+TGG 0.402351 6.4:-2846107 MS.gene47297:CDS
TACAGATACATTATAAATGC+TGG 0.403564 6.4:-2843358 MS.gene47297:intron
AGCTCTTTGTTATGCTGAGT+TGG 0.406105 6.4:-2846005 MS.gene47297:CDS
TTATCCAATCAACACATTCC+TGG 0.411658 6.4:-2845295 MS.gene47297:CDS
GGAGGTGTGGACAACTTGCC+AGG 0.415029 6.4:-2845322 MS.gene47297:CDS
TTGATAAGAATGCAAGTTAT+GGG 0.419286 6.4:+2839110 None:intergenic
GATTGGTTGGTCCTTAGTAT+TGG 0.420124 6.4:-2845597 MS.gene47297:CDS
TTATGGTATTCATTGTTACT+TGG 0.420224 6.4:-2845240 MS.gene47297:CDS
ATTGATAAGAATGCAAGTTA+TGG 0.421130 6.4:+2839109 None:intergenic
GATTCCGAGTCAATGGAGTA+TGG 0.423264 6.4:-2840374 MS.gene47297:CDS
AGCAACAAGGCCGGTAACTA+TGG 0.428211 6.4:+2840774 None:intergenic
AATCCCAGGAATGTGTTGAT+TGG 0.428696 6.4:+2845291 None:intergenic
GTTAAGAGTACCATAGTTAC+CGG 0.433321 6.4:-2840784 MS.gene47297:CDS
TTGATATTTATCATAGTAGC+TGG 0.438493 6.4:-2844556 MS.gene47297:CDS
TCAGGTGTCGGTGCAACAAT+AGG 0.439292 6.4:-2846127 MS.gene47297:intron
TTCAGGTTTCACATGTCCAT+TGG 0.440072 6.4:-2839144 MS.gene47297:intron
GACAAGGTTCATCATGTTCA+TGG 0.447931 6.4:-2847082 MS.gene47297:CDS
ATTGGATATAAACTCCCAAC+AGG 0.449772 6.4:-2844505 MS.gene47297:CDS
ACCATTCCATCTACCCCAAA+TGG 0.454542 6.4:+2844385 None:intergenic
TATCCAATCAACACATTCCT+GGG 0.458013 6.4:-2845294 MS.gene47297:CDS
ATTCCTCATCTCATGGCAAT+TGG 0.458370 6.4:-2846981 MS.gene47297:intron
ACCACTTGATTCCGAGTCAA+TGG 0.459903 6.4:-2840381 MS.gene47297:CDS
GCACTTTGTTCATCATTGCT+TGG 0.464197 6.4:-2843325 MS.gene47297:CDS
GTATCTGTATGGCTAGCATT+AGG 0.465577 6.4:-2837685 MS.gene47297:CDS
CTTATATTTGTCTTGGTGAA+GGG 0.466837 6.4:-2845943 MS.gene47297:intron
CAACACAGATATTGCTGCTA+TGG 0.470620 6.4:+2840457 None:intergenic
TCCATTTGGGGTAGATGGAA+TGG 0.472455 6.4:-2844386 MS.gene47297:CDS
AGATTTACATTATGTGGAGT+TGG 0.473135 6.4:-2839329 MS.gene47297:CDS
CTGAAGAAGCTGCAAATGTA+AGG 0.479779 6.4:+2839803 None:intergenic
GCTTATATTTGTCTTGGTGA+AGG 0.480955 6.4:-2845944 MS.gene47297:CDS
GGGTTGCTTGGTTGATTGGT+TGG 0.482129 6.4:-2845610 MS.gene47297:CDS
GTTATTACTTGCAGAGTACA+AGG 0.487874 6.4:-2844615 MS.gene47297:intron
GATTAGGCTGCACTTATTGG+AGG 0.490829 6.4:-2845340 MS.gene47297:intron
ACAATGTTTGCAGGGTTGCT+TGG 0.492709 6.4:-2845622 MS.gene47297:intron
GCCAAGAATCTTGATGGCTA+TGG 0.495624 6.4:-2840866 MS.gene47297:CDS
CTTTGTTCATCATTGCTTGG+TGG 0.496988 6.4:-2843322 MS.gene47297:CDS
AATACCATAATTGCTGAAAG+TGG 0.498101 6.4:+2845253 None:intergenic
ACAGATACATTATAAATGCT+GGG 0.498551 6.4:-2843357 MS.gene47297:intron
GATGATGCAAGACACAACTT+TGG 0.501549 6.4:-2839257 MS.gene47297:CDS
TTACTTGGATTCTATGTACT+GGG 0.502772 6.4:-2845225 MS.gene47297:CDS
TCATGGAGTGCAACTTGCTA+AGG 0.506999 6.4:-2847012 MS.gene47297:CDS
TTTACATTATGTGGAGTTGG+TGG 0.511270 6.4:-2839326 MS.gene47297:CDS
AAGATATATCCCACCAATTG+AGG 0.512139 6.4:-2840429 MS.gene47297:CDS
ATAAATGAAAGTGGTAAAGC+AGG 0.516397 6.4:+2846055 None:intergenic
GGTAATAGGAGAACAATTGT+TGG 0.520805 6.4:-2839862 MS.gene47297:CDS
GATACCATATTCCAATACTA+AGG 0.525955 6.4:+2845586 None:intergenic
CCAGCAACCATAAATGAAAG+TGG 0.535430 6.4:+2846046 None:intergenic
AATAGCAACAATTCTCCTCA+TGG 0.535899 6.4:-2847029 MS.gene47297:CDS
AGTTGCAAGCACTGCTGAAG+AGG 0.536481 6.4:-2844317 MS.gene47297:intron
AGACACAACTTTGGAAACAC+TGG 0.537540 6.4:-2839248 MS.gene47297:CDS
CTTGGTTGCGAGTATCTGTA+TGG 0.540744 6.4:-2837696 MS.gene47297:CDS
CCGAGTCAATGGAGTATGGT+TGG 0.543328 6.4:-2840370 MS.gene47297:CDS
GCTTCATTGTCACTATGTTG+TGG 0.543530 6.4:-2843631 MS.gene47297:CDS
CCTCAAAGAGATTTGCCACT+GGG 0.544631 6.4:-2843661 MS.gene47297:CDS
TGTCTCTCAACTTGCCGGCA+TGG 0.545958 6.4:-2840728 MS.gene47297:intron
GGCTGCACTTATTGGAGGTG+TGG 0.547561 6.4:-2845335 MS.gene47297:CDS
TTAGGATTGATATCATAGTA+AGG 0.551985 6.4:+2843568 None:intergenic
TCCTCAAAGAGATTTGCCAC+TGG 0.553096 6.4:-2843662 MS.gene47297:CDS
TAAGGCTGCAGCAACAAGGC+CGG 0.554127 6.4:+2840765 None:intergenic
GTTAACTATTCCTCATCTCA+TGG 0.558979 6.4:-2846988 MS.gene47297:CDS
ATTTGGGATTCAAAACTGGA+TGG 0.559171 6.4:-2844528 MS.gene47297:CDS
TGTGTTCTACAGGTTAGTGT+AGG 0.563452 6.4:-2840497 MS.gene47297:intron
GCTTGGTGGAATGTTGCCTC+AGG 0.563622 6.4:-2843308 MS.gene47297:intron
AAAATGACTATACCAAATTG+GGG 0.564150 6.4:+2845534 None:intergenic
TTTGGTTGGAACAGTAGCTA+GGG 0.567398 6.4:-2846089 MS.gene47297:CDS
ACTTACAGTTATCTATTGCA+AGG 0.575061 6.4:+2840291 None:intergenic
GAATCTTGATGGCTATGGCA+AGG 0.575725 6.4:-2840861 MS.gene47297:CDS
TGATAAGCACTTCCAGCAGA+AGG 0.576548 6.4:+2845971 None:intergenic
GTCGGTGCAACAATAGGTGC+TGG 0.577333 6.4:-2846121 MS.gene47297:CDS
TTAGTATTGGAATATGGTAT+CGG 0.578654 6.4:-2845584 MS.gene47297:CDS
ATGGGAAGCAAAGGCACCAA+TGG 0.578995 6.4:+2839128 None:intergenic
ATGCAAGTTATGGGAAGCAA+AGG 0.587254 6.4:+2839119 None:intergenic
AATCTTGATGGCTATGGCAA+GGG 0.587345 6.4:-2840860 MS.gene47297:CDS
GGAAATGGAACCTCAATTGG+TGG 0.598328 6.4:+2840419 None:intergenic
CTATACATGTTAGGAAGACA+AGG 0.599318 6.4:+2839285 None:intergenic
GATGAATCACAAGAGGGTAG+TGG 0.602141 6.4:-2847119 MS.gene47297:CDS
TCTACAACAATATCAATCCC+AGG 0.604451 6.4:+2845277 None:intergenic
ATACCATAATTGCTGAAAGT+GGG 0.608255 6.4:+2845254 None:intergenic
TGTTGGTGATGAATCACAAG+AGG 0.612602 6.4:-2847126 MS.gene47297:CDS
TTACCAATTGCCATGAGATG+AGG 0.613426 6.4:+2846978 None:intergenic
TGATTAAGCAATAATGCTTG+TGG 0.619780 6.4:+2837564 None:intergenic
ACAGTAGCTAGGGAACATGC+TGG 0.622544 6.4:-2846079 MS.gene47297:CDS
ATATTTATCATAGTAGCTGG+TGG 0.623382 6.4:-2844553 MS.gene47297:CDS
ATGCTAAGGCTGCAGCAACA+AGG 0.627465 6.4:+2840761 None:intergenic
AGCAAAAGCAGAAGATATAG+GGG 0.628720 6.4:+2843543 None:intergenic
GGTGGAGCTGCTGTTGCTCG+TGG 0.633220 6.4:-2845563 MS.gene47297:CDS
TACAGATACTCGCAACCAAG+TGG 0.633564 6.4:+2837699 None:intergenic
GGTAGTAACTATGGAGGACA+AGG 0.634352 6.4:-2847098 MS.gene47297:CDS
GTATTGGAATATGGTATCGG+TGG 0.636906 6.4:-2845581 MS.gene47297:CDS
GTTGGTGATGAATCACAAGA+GGG 0.638063 6.4:-2847125 MS.gene47297:CDS
TTGATGGCTATGGCAAGGGA+CGG 0.638975 6.4:-2840856 MS.gene47297:CDS
TCCATTGACTCGGAATCAAG+TGG 0.639750 6.4:+2840380 None:intergenic
CCAACCATACTCCATTGACT+CGG 0.644347 6.4:+2840370 None:intergenic
CAGATACATTATAAATGCTG+GGG 0.645816 6.4:-2843356 MS.gene47297:CDS
TGGTACTCTTAACAGGAACA+TGG 0.657797 6.4:+2840794 None:intergenic
CACAACTTTGGAAACACTGG+AGG 0.659750 6.4:-2839245 MS.gene47297:intron
GAAATGGAACCTCAATTGGT+GGG 0.661201 6.4:+2840420 None:intergenic
ATAGATTAGACTTACCATGC+CGG 0.667015 6.4:+2840714 None:intergenic
AAGGTTCATCATGTTCATGG+AGG 0.683985 6.4:-2847079 MS.gene47297:CDS
TTAGCAAGTTGCACTCCATG+AGG 0.694002 6.4:+2847014 None:intergenic
AAATGACTATACCAAATTGG+GGG 0.695097 6.4:+2845535 None:intergenic
GGTAGTGGTAGTAACTATGG+AGG 0.696230 6.4:-2847104 MS.gene47297:CDS
TTGCTGTCAATGGAATGCAA+TGG 0.705997 6.4:-2843525 MS.gene47297:CDS
ATGGATGCAGATGTGCATAG+TGG 0.710972 6.4:-2839883 MS.gene47297:intron
TTGGATATAAACTCCCAACA+GGG 0.715376 6.4:-2844504 MS.gene47297:intron
TTAAGCAATAATGCTTGTGG+AGG 0.739306 6.4:+2837567 None:intergenic
TCTATGTACTGGGATCAAAG+AGG 0.741746 6.4:-2845215 MS.gene47297:intron
AATGAAGCTGCAATTCCCAG+TGG 0.748958 6.4:+2843646 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.4 gene 2837567 2847156 2837567 ID=MS.gene47297
chr6.4 mRNA 2837567 2847156 2837567 ID=MS.gene47297.t1;Parent=MS.gene47297
chr6.4 exon 2846982 2847156 2846982 ID=MS.gene47297.t1.exon1;Parent=MS.gene47297.t1
chr6.4 CDS 2846982 2847156 2846982 ID=cds.MS.gene47297.t1;Parent=MS.gene47297.t1
chr6.4 exon 2845944 2846145 2845944 ID=MS.gene47297.t1.exon2;Parent=MS.gene47297.t1
chr6.4 CDS 2845944 2846145 2845944 ID=cds.MS.gene47297.t1;Parent=MS.gene47297.t1
chr6.4 exon 2845547 2845631 2845547 ID=MS.gene47297.t1.exon3;Parent=MS.gene47297.t1
chr6.4 CDS 2845547 2845631 2845547 ID=cds.MS.gene47297.t1;Parent=MS.gene47297.t1
chr6.4 exon 2845216 2845356 2845216 ID=MS.gene47297.t1.exon4;Parent=MS.gene47297.t1
chr6.4 CDS 2845216 2845356 2845216 ID=cds.MS.gene47297.t1;Parent=MS.gene47297.t1
chr6.4 exon 2844505 2844623 2844505 ID=MS.gene47297.t1.exon5;Parent=MS.gene47297.t1
chr6.4 CDS 2844505 2844623 2844505 ID=cds.MS.gene47297.t1;Parent=MS.gene47297.t1
chr6.4 exon 2844318 2844414 2844318 ID=MS.gene47297.t1.exon6;Parent=MS.gene47297.t1
chr6.4 CDS 2844318 2844414 2844318 ID=cds.MS.gene47297.t1;Parent=MS.gene47297.t1
chr6.4 exon 2843520 2843692 2843520 ID=MS.gene47297.t1.exon7;Parent=MS.gene47297.t1
chr6.4 CDS 2843520 2843692 2843520 ID=cds.MS.gene47297.t1;Parent=MS.gene47297.t1
chr6.4 exon 2843309 2843375 2843309 ID=MS.gene47297.t1.exon8;Parent=MS.gene47297.t1
chr6.4 CDS 2843309 2843375 2843309 ID=cds.MS.gene47297.t1;Parent=MS.gene47297.t1
chr6.4 exon 2840729 2840887 2840729 ID=MS.gene47297.t1.exon9;Parent=MS.gene47297.t1
chr6.4 CDS 2840729 2840887 2840729 ID=cds.MS.gene47297.t1;Parent=MS.gene47297.t1
chr6.4 exon 2840297 2840507 2840297 ID=MS.gene47297.t1.exon10;Parent=MS.gene47297.t1
chr6.4 CDS 2840297 2840507 2840297 ID=cds.MS.gene47297.t1;Parent=MS.gene47297.t1
chr6.4 exon 2839790 2839895 2839790 ID=MS.gene47297.t1.exon11;Parent=MS.gene47297.t1
chr6.4 CDS 2839790 2839895 2839790 ID=cds.MS.gene47297.t1;Parent=MS.gene47297.t1
chr6.4 exon 2839246 2839358 2839246 ID=MS.gene47297.t1.exon12;Parent=MS.gene47297.t1
chr6.4 CDS 2839246 2839358 2839246 ID=cds.MS.gene47297.t1;Parent=MS.gene47297.t1
chr6.4 exon 2839086 2839161 2839086 ID=MS.gene47297.t1.exon13;Parent=MS.gene47297.t1
chr6.4 CDS 2839086 2839161 2839086 ID=cds.MS.gene47297.t1;Parent=MS.gene47297.t1
chr6.4 exon 2837567 2837726 2837567 ID=MS.gene47297.t1.exon14;Parent=MS.gene47297.t1
chr6.4 CDS 2837567 2837726 2837567 ID=cds.MS.gene47297.t1;Parent=MS.gene47297.t1
Gene Sequence

>MS.gene47297

ATGGGTTTTGTTGGTGATGAATCACAAGAGGGTAGTGGTAGTAACTATGGAGGACAAGGTTCATCATGTTCATGGAGGTTTTTAACTAGAAGAAAAAAAGTTGTGAATAGCAACAATTCTCCTCATGGAGTGCAACTTGCTAAGGAGTTAACTATTCCTCATCTCATGGCAATTGGTAATTCAATTTTCTATCTTTTGAAATTTCAGTCTTTTGAAACATGTTTTTCATCTTGTTAAGGTTGTTGTATTGGTCTGATCTTTATCAGTTTTAACTTTTGTTTTCACTTTTCATAATTCAAGCTTTGTTTTTGATCTTTAAGGTTGTTGTAAAGTACACCCTCCGGTCACTAATATAAGCAAAAGTTTGATTTTTAGATTCATTCATTAAATGATGTATGTAGTCTATATTATAGACTACATACATCATTTAATGAATGAATCTAAAAATCAAACTTTTGCTTATATTAGTGACCGGAGGGTGTATATACACTGTCAGTATAAAAATACTTACACTGTCAACATATCAGAATCAATCACATGTGTGACTTTAGAGAGGTATTATGTCAAGAGTAAAACATTTATAGTGATTTAACGATTATGATATGAAGCACGGATACACCTCGGATTAAGTGTGTCCTGGTGTCGAACATGTGTCGTGTCTGACACCAACACATAATTACACTGAATTATGTGATTTTCTTAAATTATTAGCGATGTCGGCGTGTCACTGTCCATGTCATGTCCGGTGCCCGTGTCTGTATCCGTGCATCATCATTGATAGTGTAAAAAATCTTTACTTTGAAGATGATATGATTTAAATCATTTTTTAATGATGTTATTGAACTGGTTTAAGGTTCCTGTCTGGTTTGAGTTTTGATTTTTCAGACCCCTAAGAAGAAAAGTGAAGTGACCCTCTGGCTTGAATTATTGAATTTTATGTTTTGTATTGTATTTGATAGAAATTATGTTGATGTTATTTAATTATTTAAATTTGGGGGTGATTTGGTTCAGGTGTCGGTGCAACAATAGGTGCTGGTGTATATGTTTTGGTTGGAACAGTAGCTAGGGAACATGCTGGACCTGCTTTACCACTTTCATTTATGGTTGCTGGAATAGCAGCAGCTCTTTCAGCTCTTTGTTATGCTGAGTTGGCTAGTCGTTTTCCTTCTGCTGGAAGTGCTTATCACTATGCTTATATTTGTCTTGGTGAAGGGTATTTATATATTTACCTTCTTTAGATTCTTATGATTTCTTACAATAGATTAATTGTTTTTTTTTCCTTTTCATTTTTACGCCAACTTTGTTATTGGTGTGAAATATTCACTTACTTTTTCAACCTTTGGTGGGGTCAGCCCTCCGAACCATGTTTTTTTTTTTTAATCGGAGACTTACTAAAGAGTTCTAAGTCCAATTTCACTCAGACTGACGTAATGTTGATACATTTGATAGTGGTTTAAACTATATGTTGAATCCGAGACAATGCTTGATTCCGAGACGTGATATATTTTGTGTACAATGTTTGCAGGGTTGCTTGGTTGATTGGTTGGTCCTTAGTATTGGAATATGGTATCGGTGGAGCTGCTGTTGCTCGTGGCATAACCCCCAATTTGGTATAGTCATTTTAACTCTATGTAGTTTTTTTGCGGTAAACCTATGTATCTTTTCTTTGCAACTGCATATATTAATCTCTTGAGGTAATCGAGATGCATTTAAGGGGTTGATTTTGATTGGTTTGTTTGAAATGCAAGTAAAAATTATTTGATGCAAGTGTTGATATGAAATTTATATTTCTGTGATTAGGCTGCACTTATTGGAGGTGTGGACAACTTGCCAGGATTTTTATCCAATCAACACATTCCTGGGATTGATATTGTTGTAGACCCACTTTCAGCAATTATGGTATTCATTGTTACTTGGATTCTATGTACTGGGATCAAAGAGGTAAATCTTTTTGATGTTTTTTTATATAATCATTTATATATGATTTTCAACTTCGCTTTATAAACTTTACAAGCTAGAGTTTCTTTTGTAAACTCTCACGGATTTGTCTAAGGCGTCTCAGTGAGTTGAGGAGAATGCTTGTTTATAAACTATAATTTGTATCGTTTCTCAAGCCATGTGATACTTTTTGTTACTAGAACAATAGCCTCCAATCAAGGCTAATAGGCAAAAGGGTGTGTCAGCACTTGTAAGTGACTTACGCCCTCGTTCTAGCATTGTCACATCAAGTCTGCGTCAATGTATCGAATTTAAGCATGCTACACCGCTTTTCTGATGTATTGTCTGTTTTAGGCTTTGTGTAAGCCCTCACAGTTTAGTCCTTAGTTCAAACACACCGGAGTGGGCTGAGGAGAATTAGTGTTTATAAACTACCCTTAGTCTCAATTTTCAAGCAATGCAAGATATTTTGGTGTACCGGAACATTAATATTATTATGCAATGTATCCATTTTATAAACAGATTACGACTAATCCATTCAAATATCCAAATATATTTTCTTTATTCATTTGATTTGAATTGTTATTACTTGCAGAGTACAAGGATACAAAGTATAGTGACATCAGTGAATATATGTGCTTTGATATTTATCATAGTAGCTGGTGGTTATTTGGGATTCAAAACTGGATGGATTGGATATAAACTCCCAACAGGGTATTTTTTTACATCTTTACCCCTACTCCGTCTATATTCGGTATCTTCAAGTTAGTCGTAAATAATATTCGTCTCTTGTTTTAATTATAGGTATTTTCCATTTGGGGTAGATGGAATGGTTGCTGGTTCTGCAACAGCCTTTTTTGCTTACATTGGTTTTGATGCAGTTGCAAGCACTGCTGAAGAGGTATATAACATGATAATATACAATGTTTCATGTAACTTACCTTTTTAGTTCAAATTGCGGCCAAATAGGACTTATGCGAAAATATACAACCATTTCAAATTTACATCACCACTTCGTGACCGCGTTGAAATCCTTGACACTGCAGTTAAATAGGAATCAATTCTTTCAAAACTGGGATGGAGATCAAACCGGTCATACTTTTGAGACATGGTTCAATTGGTTTAATCATATTAACAACGGTTGAACTAGATTTTTTTTAAAGAAAAAGGTTGAGCTAGATGACTATTAAATAAGTATTAAGAAAGTTTTTTCGTAAAAAGAAACCGATTGAACCAGCCGCGGTTCAACCTAGTTGGACCTGGTTCTAAGAGACTAAGAACTGATAGTGGCTGAACCAACCGATATACTGACCAGTTCTCACTTTAACCGGTTGAATCAGTCTGTCCGGTTCTTCTTTTAGACAAAATATTCGGTCCAGTTTTGATAACAGATGATGTAGCCATAAAGTGGTCGCGGACACATTAGAATCCATAATGCAGCAATCTCAATCGTGGTTGCAGACCCTTCTTTTGAAGCCTTGAGAGTAGGTTCAAACTTTCTAATAGTGTTTTACTACGATCAACAGGTGAAAAATCCTCAAAGAGATTTGCCACTGGGAATTGCAGCTTCATTGTCACTATGTTGTGGATTGTATATGATAGTATCAATTGTTGTTGTTGGTTTAGTACCTTACTATGATATCAATCCTAACACCCCTATATCTTCTGCTTTTGCTGTCAATGGAATGCAATGGTCAGCGTAAGTTTTACAATTTTGAAACTCTATTACGAATTTCTACGTAGTGTTTTCAATGTGTCCATTTTGTGTATAAATATTCTTAAAATACCATTTTCTAAGTATGCATTAGTTTTCTTAAGTCATTTTTCATGATTGCGATTACAGATACATTATAAATGCTGGGGCTATTACAGCACTTTGTTCATCATTGCTTGGTGGAATGTTGCCTCAGGTAAAACTAATTGGAACCCTCTATCCTCTAAAATTGTTTATAGTTGATGTTGCGAATTCGATGAGAAAACACACCAATAACAAATTTGATGTGTGGAGCAAGTGATAATCAAGCAACCAAAACAAAGTGTATGAAACAGTTATAATCACAAGCCAAAAGTAGAAAACAGTGAGAGAGAAAAGAAGAGAGAACACAAAAGAATTTGTTGACCCAGTTCGATCCAAATTGACCTAGTCTGGGGGAGAGAGCAGCCCTCCGTTCCACTATATGATGAGTAACGTTACAAAAAAGATGTCAATCGGTTACAAGAATAAGTCTCCCGCCTAATTCTACCCAAAGTCCCAATCTCTTCCCGTAACCAAGAGACTCAATCCTAATAGTGTTTCCCAAGGTGAATCAACCCTCAAACCCTAGTGTTTTTTCCAACGAGACAAACTCTATACAAACCCTAGATTTGTTGCCTTTCTAAACCCTTGTTTCAGCCCCCTCTATCTCAAGGTTTACAATGATACAATGCCTATATTTATAGTAAAAGTAACTCCCATAAAATTGGAACAAATCTGGCCCATAAAAATATGTTTCTGAAAAATACTGCACGCAAAATCGGGACCCGATTTTACCAAATCGGGCGCCGATTTTTCCAGAACAGGAAGCCTCCCAAAGGCAGCCAAAATTGGGCCCCGAACTCCACAAATCGGGCGCCGATTTTTGGTCTTCCAGCAACTATGATTTTGCACTCCAAACTCCAATTTTGAGTCACTTCTACAACAGTTGATTCTTCCTCCCCAAAGTTTGTTTTGCAATTTCTGTTAAATTTCATGTTCATGCAATATTTATCAGTTGTTTCATTTGATTTTTTTTTTTTATTTTTAAATTCAATACAAATTTCTCGAAACGGATTATTATTTTATTTTTTTGGATTACAAGAGGGCCGAAGCCTAATTAGGCAAGGTGTAGCAACACCATTAACATCTGCTAAAAATAAAGAGCTTAATTGAACATGACATTATTAAAAAAAATGATCAACGTAGAACCCTCTTCGTATGCATAGTTTGCTAATGCATCAGCACAAGCATTTGCTTCTCGATAAGTACGGATGATCCGAATATCCCAATTCAACTCCAACAGACGACTAGCATACCATAATGTATGACAAGCTGTAGCCAATATCTCTGCCAGTTTAACACATCTCTATAATTAGCTTCCACCATATTTAAGCCGAAGGCTCGTCGCAGTTGGACAATCTCTAAGAACATGTAAAGCTGCTTCCGCGATGTCTCCACAATGATAACAATGCTCCATAATGATAGGCATTCTATGAAATCTATCATTAGTTAACTTAAGAGTCTATCGTGCTGTAAAATCCACACAAAACTTCGAATCCTCTCTGGAACTTTCAATTTCCACACGCGAGTCCAAACATTAGACATACTATAAAAAATGAAAGTACATAATTCATGACAAGTGTATGACATAGAAAATTCACCAAACTTAGCTCCAGGCCACTTAGAATTATCCGGACCAAGCTCTTCATGAGGGGCTGGTATAGATTTAATTTTGTTGATGTTGAATAAGAGAGAAAAGAGAGACATATGATGAAATACCGTGTGTCTGAATAGCACAACGGAAGATTTATTATATAGAAGTAAGTAGCTTAGGGCCTAAGCTATGATTTATTTACAGAATAATATTATATCCTAAGTAACTTAGAAAGTAAGCTAAAATATATTTAGAGCACATATATAATTATTTACTATATATTTATACATCAACAGTTAACAATATCAATTGACAGTTATTGCTGCAGATTGTGTAGCCGCCAACCTCCATCAATGTCGACAAAGTCTAAAGCTTTGCAGTCACACTCACACATATCAGATGGTATGCTACTGTCCGTATCAGAAATCGCAACCCTTGATCCACCCATAAATCCTCCCAAACTCTTTCACCATTTCGAACAACCTAGCGCACCATAGAACACATAGCTGGCCACAAATGAACCAAGTTTTTCCATAGACTAGAATCACGTGGTTTAGCTATCATCATATTCAAAGAAATGTTACTTCTATCATACTTGCCTTTTAGCACACTACACCAAAGTGCATTATCTCCATTCTTCAATTTCCAATCTAGCTTGATCAGACAAGCTTCATTCATCTGTTCCAACCTCCTAACACCAACCTAGAATGAAAAGGATTAACTTAAATCAAATATTATGTACACTAATAAAACAAAAAAAAAAAACAAAGGGTACTAAACTCTAATAAAATAACTCAATAAAGTTTTTTTCTCACATTCCTTCTCTTTATTAGAACATTTTCATGTGTTATATTTTAAAAAGAAAATTCCTACTATAAGTATATATAGTAAAACAAAGCTAAAGCTGAATTATTGACGTGTTTTCTGTTTAATATCTCTCAGCCAAGAATCTTGATGGCTATGGCAAGGGACGGATTGCTGCCACCATTTTTTTCTGATATAAATAAGCACAGCCATGTTCCTGTTAAGAGTACCATAGTTACCGGCCTTGTTGCTGCAGCCTTAGCATTTTTCATGGATGTCTCTCAACTTGCCGGCATGGTAAGTCTAATCTATATTTGCAGTTGTTAGGATTCAACTGAAGTTTAATTGCGGCTCAACCGGTTGAACCAACTGCAATTGGATTGCGGTTCAACCAAACAACAGTATAACCGAAACCAAATCACTGGTTTCATGTTCAACATATTGAATACGGCCAGTTCGGTCCGGTTTTTAAAATAATTGATTATAGTACTAATGTTTATTTTGCTTGTGTTCTACAGGTTAGTGTAGGCACTCTTCTTGCATTCACCATAGCAGCAATATCTGTGTTGATAGTAAGATATATCCCACCAATTGAGGTTCCATTTCCCCCTTCTCTAAAAGAACCACTTGATTCCGAGTCAATGGAGTATGGTTGGAGCCATTTGGAGACAAATGAAAAAGAAGTAATCCAAAAACCCTTAGTTGTTAAAAACCTTGCAATAGATAACTGTAAGTCCTGATTTTTATTTTCTATTTAGTTACTCAATCATGCAAAATATATGTAACACCGACCCTTCATGTTGAAGGCATGTTGACTGATGTCGGACATATATCGGTGTCGGACACGTGTAGTGTCCGACCCAGCACGTGTCAGTGTCCGATACTGACATGGTAAAAACACACGTGGTTACATTATATTACACAATTTTCTAAAATTGTATTTGTGTTAGATGTACCAATGTCGTGGCCAGTGTCTGTGTCGGTGCAAATTATAACATATATTGCTCTAGATATGCAATTAATGTTCCTTTAGTTATTTTATTATTTAGTATAATTTCTTTTTAGGTATTTCCTTATATTATTTGACATAAGTTACTTTTCTCCCCAACCCTATTTGTTTATGGATGCAGATGTGCATAGTGGTAATAGGAGAACAATTGTTGGCAGTGTAATAGCATTCATATGTTTAGGTGTATTTGTCCTTACATTTGCAGCTTCTTCAGCATATCTTCTCAGGTTGGTTTAGTGGCATATATTTCTTTTTCAAGTTGCATAAACATTGATAATTTATAGTGGCATATATTTCATTTTCAAGTTGCATAAACATTGATAATTTATAGATAATAGATATATATGATTTGTTGAGTGTTCTACATCAGATGAGATATGGTATAAAAATATGTTTGTAAAAAAAGGTAGGAAAGTGAGTTTATATACGGGAAGCATCCCTCGCCTTACAAGTCGTTTTTGTAGGGATAAATTAGACTTAATCCAGATTCTAAAATACTATCTTAGTCTATCATGATCCTTTAAACCACCCGCTATCAGACTACTCGGGTCACTATTTTATCGATTGATCTAAGATGCTATAACTGATTAATGTTGCATGCCATTTGAGTATTTCTAAAAAAATAACTAAAATCATATTTTATGTATGTTATTTTCAGTTCAGTTAGATTTACATTATGTGGAGTTGGTGGCATTCTTCTTTTATCTGGCCTTGTCTTCCTAACATGTATAGATCAAGATGATGCAAGACACAACTTTGGAAACACTGGAGGTATGGTTTACAATTTATTTATGATAATACTTTTATGCAACCAATGTGAGCTAATGTCATGTTTCTATGCAATTTGTTTTTCAGGTTTCACATGTCCATTGGTGCCTTTGCTTCCCATAACTTGCATTCTTATCAATTCATATTTACTTATTAGTCTTGGGTAAGTATCCATATTCAAATTTGAAAATATATGACTTTCTTTTTAATATTTTTTTAAAGAAATCTAATATATTTCTAAAAGATCAAGTGACATTAAGTCAGTCTTTGAGGACATTAGTTTATTAATCCTGAAAGTTATAATAATAATAATAATAATAATAATTTACTCCTCTAAAGAAATTATCACAAAAGAAACATTACATTGTTTTGAGTGTAATTGAATCCGATCTTTTAAGCAAAACCTTGAGTTCAAGTCTTGTTGATGAAACAAAATATGTTTAAGAGGGGAAACCCCGCTAAATGTGACCAACTAGATTTCTGGACGAATATTAGTTATCGGCAAAGTCAGTGAATACTTCACACCAATGACATGGTAAACAATTTTGTTTTTATCACAAGTTCAAATATATTTTTTTTGAATACAAGAGGGTCGAATCCCAAAGAAAAACAAAGAATATCACTTAACATGCCGCGGTGTCGAAATACCAACTAAATCAGCTAAGAATAGAGATGAGATTTGAGCAAGACAATGCTCATACAAAAATTTATCACAAGTTCAGATCTTAAATAACCGATAAATGAAATTTGGTTTAGTTCCTTAGGCCACGTTTACTTTGTTAAGACATTTTCTATTTTCATTTTGTAAGATATGCGTTCATTTTAACTTACTAATAATAAGATGTAAGACTCTTGAAATGAACAATTGTGATGGAGAGAAGATGAAATGCTAGCTAGGAAATGAAAATGATGACAACAAATTTTTCGTTGTCTCCAAAAAACACACACAATTGTTCATTTCAAGAGTCTATTATCTTCTTGTTGATAAATAAAATTAACACAAATTTCAAAAAAAAATGTCAAAAAGTAGACCACCTCACTCTTTCAATTTGTGCATATGAGAATGACTTTGATGTCACTTATCAATCGAGTAACCAATGCTATGTTTTGTTTTGAGAAGCAAGTAAGAAGAGATAAAAAAATGTGAGAAAGACCATGAGAAAATAGAGGTGAAAAAGTAAAATAGATTTAAAATATTGTTTGATACAAGAGAAAGAAAAAAGAAAAACAGTAATAAGATATGATTGAAATAGAGTTTATAAAGTTTAGAGAATTCTCACATTACAAGTCAGTTTTGTGATATGACTTAAAGGAAGTTTACAAGACTTTGACAATTCTCACATTACAAGTTCATATATTACAAGTCAATTTTGTAGAGTTAAATCAGTCTAATAAAATATCTAACATATCAATTATTTATTTTATTTGCTATAGCATTTTTCTCTCACAAGGACCTTTTTTGTCCCTTTATTTGCACAACTTTATTAACTAATTCTATCATTTGTGTTTCATATTTTTGAAGGAGTGCCACTTGGTTGCGAGTATCTGTATGGCTAGCATTAGGAGTTATTGTTTATGCATTCTATGGTCGAACCCATAGCTCTCTAAAAGATACAGTTTATTTGAAGGCTATTCAAGTTGATGATACTACTAATTACACCTCCACAAGCATTATTGCTTAA
Protein sequence

>MS.gene47297.t1

MGFVGDESQEGSGSNYGGQGSSCSWRFLTRRKKVVNSNNSPHGVQLAKELTIPHLMAIGVGATIGAGVYVLVGTVAREHAGPALPLSFMVAGIAAALSALCYAELASRFPSAGSAYHYAYICLGEGVAWLIGWSLVLEYGIGGAAVARGITPNLAALIGGVDNLPGFLSNQHIPGIDIVVDPLSAIMVFIVTWILCTGIKESTRIQSIVTSVNICALIFIIVAGGYLGFKTGWIGYKLPTGYFPFGVDGMVAGSATAFFAYIGFDAVASTAEEVKNPQRDLPLGIAASLSLCCGLYMIVSIVVVGLVPYYDINPNTPISSAFAVNGMQWSAYIINAGAITALCSSLLGGMLPQPRILMAMARDGLLPPFFSDINKHSHVPVKSTIVTGLVAAALAFFMDVSQLAGMVSVGTLLAFTIAAISVLIVRYIPPIEVPFPPSLKEPLDSESMEYGWSHLETNEKEVIQKPLVVKNLAIDNYVHSGNRRTIVGSVIAFICLGVFVLTFAASSAYLLSSVRFTLCGVGGILLLSGLVFLTCIDQDDARHNFGNTGGFTCPLVPLLPITCILINSYLLISLGSATWLRVSVWLALGVIVYAFYGRTHSSLKDTVYLKAIQVDDTTNYTSTSIIA