Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040400.t1 | XP_013448021.1 | 96.1 | 412 | 16 | 0 | 1 | 412 | 1 | 412 | 2.00E-232 | 814.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040400.t1 | Q67ZU1 | 60.0 | 405 | 155 | 4 | 12 | 411 | 14 | 416 | 1.1e-143 | 511.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040400.t1 | A0A072TYW1 | 96.1 | 412 | 16 | 0 | 1 | 412 | 1 | 412 | 1.4e-232 | 814.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029607 | MS.gene040400 | PPI |
| MS.gene060313 | MS.gene040400 | PPI |
| MS.gene029609 | MS.gene040400 | PPI |
| MS.gene060315 | MS.gene040400 | PPI |
| MS.gene040400 | MS.gene71663 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040400.t1 | MTR_7g029365 | 96.117 | 412 | 16 | 0 | 1 | 412 | 1 | 412 | 0.0 | 828 |
| MS.gene040400.t1 | MTR_7g029365 | 95.752 | 306 | 13 | 0 | 1 | 306 | 1 | 306 | 0.0 | 613 |
| MS.gene040400.t1 | MTR_6g023740 | 58.413 | 416 | 165 | 5 | 1 | 411 | 1 | 413 | 1.72e-178 | 504 |
| MS.gene040400.t1 | MTR_6g023715 | 55.583 | 412 | 156 | 9 | 5 | 411 | 5 | 394 | 1.07e-161 | 461 |
| MS.gene040400.t1 | MTR_6g023750 | 58.873 | 355 | 143 | 3 | 60 | 411 | 2 | 356 | 2.72e-155 | 443 |
| MS.gene040400.t1 | MTR_5g084950 | 52.139 | 374 | 172 | 2 | 38 | 410 | 33 | 400 | 2.22e-144 | 417 |
| MS.gene040400.t1 | MTR_7g081050 | 48.501 | 367 | 186 | 1 | 44 | 410 | 40 | 403 | 8.11e-134 | 390 |
| MS.gene040400.t1 | MTR_3g081040 | 48.656 | 372 | 187 | 2 | 40 | 410 | 36 | 404 | 1.22e-130 | 382 |
| MS.gene040400.t1 | MTR_3g081060 | 49.457 | 368 | 181 | 4 | 45 | 410 | 45 | 409 | 1.59e-130 | 382 |
| MS.gene040400.t1 | MTR_6g033965 | 45.924 | 368 | 192 | 4 | 44 | 410 | 41 | 402 | 3.98e-121 | 358 |
| MS.gene040400.t1 | MTR_3g080980 | 45.753 | 365 | 195 | 1 | 46 | 410 | 42 | 403 | 1.60e-115 | 343 |
| MS.gene040400.t1 | MTR_6g033975 | 44.565 | 368 | 196 | 5 | 44 | 410 | 41 | 401 | 2.58e-115 | 343 |
| MS.gene040400.t1 | MTR_7g081060 | 41.278 | 407 | 223 | 6 | 9 | 411 | 10 | 404 | 1.64e-110 | 330 |
| MS.gene040400.t1 | MTR_1g107330 | 39.633 | 381 | 218 | 5 | 38 | 412 | 25 | 399 | 2.46e-101 | 307 |
| MS.gene040400.t1 | MTR_0595s0010 | 60.084 | 238 | 88 | 5 | 1 | 234 | 1 | 235 | 4.07e-100 | 301 |
| MS.gene040400.t1 | MTR_1g107330 | 41.455 | 275 | 154 | 3 | 38 | 306 | 25 | 298 | 8.84e-72 | 229 |
| MS.gene040400.t1 | MTR_5g006650 | 47.953 | 171 | 73 | 4 | 69 | 234 | 44 | 203 | 2.86e-44 | 154 |
| MS.gene040400.t1 | MTR_6g085070 | 26.521 | 411 | 245 | 16 | 34 | 407 | 146 | 536 | 2.92e-18 | 87.4 |
| MS.gene040400.t1 | MTR_6g085070 | 26.521 | 411 | 245 | 16 | 34 | 407 | 278 | 668 | 5.28e-18 | 86.7 |
| MS.gene040400.t1 | MTR_8g103850 | 25.062 | 403 | 257 | 11 | 44 | 414 | 294 | 683 | 2.21e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040400.t1 | AT5G14180 | 60.000 | 405 | 155 | 4 | 12 | 411 | 14 | 416 | 0.0 | 521 |
| MS.gene040400.t1 | AT5G14180 | 64.194 | 310 | 111 | 0 | 102 | 411 | 7 | 316 | 2.15e-156 | 444 |
| MS.gene040400.t1 | AT5G14180 | 63.844 | 307 | 111 | 0 | 105 | 411 | 1 | 307 | 5.89e-154 | 437 |
| MS.gene040400.t1 | AT5G14180 | 59.667 | 300 | 114 | 4 | 12 | 306 | 14 | 311 | 3.81e-131 | 380 |
| MS.gene040400.t1 | AT5G14180 | 54.737 | 285 | 120 | 5 | 12 | 289 | 14 | 296 | 6.16e-110 | 325 |
| MS.gene040400.t1 | AT2G15230 | 38.462 | 364 | 214 | 4 | 47 | 410 | 32 | 385 | 1.87e-92 | 284 |
| MS.gene040400.t1 | AT1G73920 | 25.191 | 393 | 245 | 10 | 44 | 402 | 223 | 600 | 1.84e-18 | 88.2 |
| MS.gene040400.t1 | AT1G73920 | 25.191 | 393 | 245 | 10 | 44 | 402 | 292 | 669 | 2.34e-18 | 87.8 |
| MS.gene040400.t1 | AT1G18460 | 25.888 | 394 | 241 | 14 | 44 | 402 | 290 | 667 | 2.17e-17 | 84.7 |
Find 89 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGATCTGCTAGAATTAA+AGG | 0.174183 | 7.4:+71953115 | None:intergenic |
| TGCTCATGCTGATTACATTA+TGG | 0.187385 | 7.4:-71950462 | MS.gene040400:CDS |
| AAACAGATCACTACACTATT+TGG | 0.227174 | 7.4:-71951668 | MS.gene040400:intron |
| CTTCTATGTTCTTACCCTTT+AGG | 0.233695 | 7.4:+71951629 | None:intergenic |
| GTTGCAGCCAAATCCTTTAT+TGG | 0.270019 | 7.4:-71951888 | MS.gene040400:CDS |
| TTTATGTACCTCACCAATAA+AGG | 0.282079 | 7.4:+71951875 | None:intergenic |
| CAGATCATGGCTTTGATGTT+TGG | 0.292443 | 7.4:-71953102 | MS.gene040400:CDS |
| GATTATGTGTTTAGCCAAAC+TGG | 0.299006 | 7.4:-71952214 | MS.gene040400:CDS |
| TACCTTCTGGAATCCTTTGC+AGG | 0.303254 | 7.4:+71956019 | None:intergenic |
| GCTCATGCTGATTACATTAT+GGG | 0.304433 | 7.4:-71950461 | MS.gene040400:CDS |
| AAGTCGTAGCAGTCAATTCT+AGG | 0.304700 | 7.4:+71951476 | None:intergenic |
| ATGTTATTACCTGAAGTTCT+TGG | 0.316168 | 7.4:+71956496 | None:intergenic |
| GTGTAAATATGCAGGCCTTT+TGG | 0.322829 | 7.4:-71952285 | MS.gene040400:intron |
| GCTTCTGCTGTCATTGTTCA+TGG | 0.326523 | 7.4:-71956528 | MS.gene040400:CDS |
| ATTAAAGGCAAGTCTTGTTC+TGG | 0.333137 | 7.4:+71953130 | None:intergenic |
| GCTTCAAGTCGTGTCTCCTT+TGG | 0.358205 | 7.4:-71956597 | MS.gene040400:CDS |
| TACCTCACCAATAAAGGATT+TGG | 0.359496 | 7.4:+71951881 | None:intergenic |
| TCCTTTGGAAGAAATCAAAA+TGG | 0.378214 | 7.4:-71956582 | MS.gene040400:CDS |
| AATTAATCTTCTGCCCAGTT+TGG | 0.379068 | 7.4:+71952200 | None:intergenic |
| TTGAAGGTTACAACTAAAGA+TGG | 0.383740 | 7.4:-71956054 | MS.gene040400:intron |
| GACTTGATGACTGCATTAAC+TGG | 0.384778 | 7.4:-71951458 | MS.gene040400:intron |
| ATACAAATGCCAAGAACTTC+AGG | 0.389343 | 7.4:-71956505 | MS.gene040400:intron |
| ATGTTGAGAATTTACTTGAT+AGG | 0.389542 | 7.4:-71950535 | MS.gene040400:CDS |
| GGTAGAGTTGAAGGTAGAAA+TGG | 0.395667 | 7.4:-71956000 | MS.gene040400:CDS |
| CTACCTTCAACTCTACCTTC+TGG | 0.406112 | 7.4:+71956006 | None:intergenic |
| AAATGGTGTTAGCCCTCCTT+TGG | 0.406335 | 7.4:-71956565 | MS.gene040400:CDS |
| ATGTGGCTTAGATAAGCAAT+AGG | 0.409857 | 7.4:+71951930 | None:intergenic |
| CTAGCAGAATTTAATCCTAA+AGG | 0.421609 | 7.4:-71951644 | MS.gene040400:CDS |
| CCTTTAATTCTAGCAGATCA+TGG | 0.423751 | 7.4:-71953115 | MS.gene040400:CDS |
| TAGCAGAATTTAATCCTAAA+GGG | 0.427487 | 7.4:-71951643 | MS.gene040400:intron |
| ACATAAACATACTGGGTTAG+AGG | 0.428314 | 7.4:+71953027 | None:intergenic |
| TTCTTTGTTGATGTTGATTG+AGG | 0.434847 | 7.4:+71951289 | None:intergenic |
| TAGTGCATTATGTTATAATC+TGG | 0.439008 | 7.4:+71950659 | None:intergenic |
| CCTCCATAGCTAATGAAGAT+AGG | 0.443401 | 7.4:+71950584 | None:intergenic |
| GTTAGCCCTCCTTTGGATGA+AGG | 0.456402 | 7.4:-71956558 | MS.gene040400:CDS |
| GACTTGAGAAAGGCATCAAC+AGG | 0.457432 | 7.4:+71951512 | None:intergenic |
| ATTCCAGAAGGTAGAGTTGA+AGG | 0.468226 | 7.4:-71956009 | MS.gene040400:CDS |
| CATAAACATACTGGGTTAGA+GGG | 0.468329 | 7.4:+71953028 | None:intergenic |
| AAGGTAGAAATGGTGGGACT+AGG | 0.475923 | 7.4:-71955990 | MS.gene040400:CDS |
| GATTATAACATAATGCACTA+TGG | 0.477158 | 7.4:-71950656 | MS.gene040400:CDS |
| AACAAAGAACATGGTGCACT+TGG | 0.480584 | 7.4:-71951275 | MS.gene040400:CDS |
| ATGTTGGATAGGTTATATAT+TGG | 0.480961 | 7.4:+71950620 | None:intergenic |
| CTACCTATCTTCATTAGCTA+TGG | 0.481467 | 7.4:-71950587 | MS.gene040400:CDS |
| TAATTACGTTGGCCACTCTC+TGG | 0.482825 | 7.4:-71952182 | MS.gene040400:intron |
| TTGGATAGGTTATATATTGG+TGG | 0.488015 | 7.4:+71950623 | None:intergenic |
| AGGTAGATCATGTGGAATGT+TGG | 0.504399 | 7.4:+71950604 | None:intergenic |
| AGAGTTGAAGGTAGAAATGG+TGG | 0.507614 | 7.4:-71955997 | MS.gene040400:CDS |
| ATAAAGCTGCTGATTTCAGC+TGG | 0.510041 | 7.4:+71951958 | None:intergenic |
| AGCCACATGAACACTGCACT+TGG | 0.518331 | 7.4:-71951915 | MS.gene040400:CDS |
| TACTTCTCTTATCAACATCA+TGG | 0.520662 | 7.4:+71950504 | None:intergenic |
| GCTTTAGCTTCCTTCTCTGA+AGG | 0.525067 | 7.4:-71951993 | MS.gene040400:CDS |
| TGGATAGGTTATATATTGGT+GGG | 0.529275 | 7.4:+71950624 | None:intergenic |
| GAGACCAACATGGTTTCTCT+AGG | 0.529963 | 7.4:-71956681 | None:intergenic |
| GATATTACAACATGGAGTAT+TGG | 0.531184 | 7.4:-71955956 | MS.gene040400:CDS |
| AACTATGCAGTTGTTAGACG+TGG | 0.537740 | 7.4:-71950710 | MS.gene040400:intron |
| ACACGACTTGAAGCTTGATA+AGG | 0.543173 | 7.4:+71956606 | None:intergenic |
| TGGTGGGACTAGGAAACAAC+CGG | 0.545655 | 7.4:-71955980 | MS.gene040400:CDS |
| GATCATGTGGAATGTTGGAT+AGG | 0.551442 | 7.4:+71950609 | None:intergenic |
| AGCCAAATCCTTTATTGGTG+AGG | 0.551660 | 7.4:-71951883 | MS.gene040400:intron |
| GTCCCAAGACCAATTCCAAA+AGG | 0.554581 | 7.4:+71952270 | None:intergenic |
| CTCATGCTGATTACATTATG+GGG | 0.555559 | 7.4:-71950460 | MS.gene040400:CDS |
| TGTGGCTTAGATAAGCAATA+GGG | 0.559261 | 7.4:+71951931 | None:intergenic |
| TGAAGGTTACAACTAAAGAT+GGG | 0.560420 | 7.4:-71956053 | MS.gene040400:intron |
| CCTATCTTCATTAGCTATGG+AGG | 0.565466 | 7.4:-71950584 | MS.gene040400:CDS |
| TAGTCGCCGACATGTCTCAT+TGG | 0.565789 | 7.4:-71953053 | MS.gene040400:CDS |
| AAAGGCAAGTCTTGTTCTGG+AGG | 0.567063 | 7.4:+71953133 | None:intergenic |
| GCACATATGCCTTCATCCAA+AGG | 0.576347 | 7.4:+71956549 | None:intergenic |
| CACCAAGTGCAGTGTTCATG+TGG | 0.576864 | 7.4:+71951913 | None:intergenic |
| ATTACAACATGGAGTATTGG+TGG | 0.587960 | 7.4:-71955953 | MS.gene040400:intron |
| ACTATGCAGTTGTTAGACGT+GGG | 0.595087 | 7.4:-71950709 | MS.gene040400:intron |
| ACTCCATGTTGTAATATCAC+CGG | 0.596325 | 7.4:+71955961 | None:intergenic |
| AGTCGTAGCAGTCAATTCTA+GGG | 0.599847 | 7.4:+71951477 | None:intergenic |
| ATTATGTGTTTAGCCAAACT+GGG | 0.603199 | 7.4:-71952213 | MS.gene040400:CDS |
| AAGGCAAGTCTTGTTCTGGA+GGG | 0.605642 | 7.4:+71953134 | None:intergenic |
| GTTTGGATTGCTAACACTAG+AGG | 0.610136 | 7.4:-71953085 | MS.gene040400:CDS |
| GGGTGCAGGATGGCATGACA+TGG | 0.627156 | 7.4:-71953165 | MS.gene040400:intron |
| CATATGCCTTCATCCAAAGG+AGG | 0.627342 | 7.4:+71956552 | None:intergenic |
| AGCACATAGAGACTTGAGAA+AGG | 0.629811 | 7.4:+71951502 | None:intergenic |
| AGGGGTCCAATGAGACATGT+CGG | 0.633111 | 7.4:+71953047 | None:intergenic |
| ATATGCCTTCATCCAAAGGA+GGG | 0.644823 | 7.4:+71956553 | None:intergenic |
| ATGAAGATAGGTAGATCATG+TGG | 0.646816 | 7.4:+71950596 | None:intergenic |
| CTATGCAGTTGTTAGACGTG+GGG | 0.648539 | 7.4:-71950708 | MS.gene040400:intron |
| AGTAATGGAGTACCAGAGAG+TGG | 0.649875 | 7.4:+71952170 | None:intergenic |
| CAACCGGTGATATTACAACA+TGG | 0.652027 | 7.4:-71955964 | MS.gene040400:CDS |
| ATAAACATACTGGGTTAGAG+GGG | 0.656553 | 7.4:+71953029 | None:intergenic |
| ATCAACATCAACAAAGAACA+TGG | 0.657345 | 7.4:-71951284 | MS.gene040400:CDS |
| AGCCTGCAAAGGATTCCAGA+AGG | 0.663410 | 7.4:-71956021 | MS.gene040400:CDS |
| GGGCAGAAGATTAATTACGT+TGG | 0.668941 | 7.4:-71952193 | MS.gene040400:CDS |
| GAGTTGAAGGTAGAAATGGT+GGG | 0.680227 | 7.4:-71955996 | MS.gene040400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATATAAAATATTAAT+TGG | + | chr7.4:71955509-71955528 | None:intergenic | 0.0% |
| !! | TAATATATAAAATATTAATT+GGG | + | chr7.4:71955508-71955527 | None:intergenic | 0.0% |
| !! | AATAATAATAAAATGATTTG+TGG | + | chr7.4:71953417-71953436 | None:intergenic | 10.0% |
| !! | TATAGTATAAATGTTTATAT+TGG | + | chr7.4:71955668-71955687 | None:intergenic | 10.0% |
| !! | TATATCTTCATAAAAAATTA+TGG | - | chr7.4:71953076-71953095 | MS.gene040400:CDS | 10.0% |
| !!! | CATAATTTTATACATAAAAA+AGG | - | chr7.4:71955344-71955363 | MS.gene040400:intron | 10.0% |
| !! | AAAAATTTATGTATTAGAGA+AGG | + | chr7.4:71954718-71954737 | None:intergenic | 15.0% |
| !! | AAGATACATTAATTTCATTA+AGG | + | chr7.4:71954674-71954693 | None:intergenic | 15.0% |
| !! | ACAAATAGAATAGTAAAAAA+AGG | + | chr7.4:71955017-71955036 | None:intergenic | 15.0% |
| !! | AGAACATTATTAATTGTTTA+AGG | - | chr7.4:71955991-71956010 | MS.gene040400:CDS | 15.0% |
| !! | ATTACTATTACATTAATTAG+AGG | + | chr7.4:71953826-71953845 | None:intergenic | 15.0% |
| !! | CAAATAGAATAGTAAAAAAA+GGG | + | chr7.4:71955016-71955035 | None:intergenic | 15.0% |
| !! | CTAACATTTAATTAGATATT+TGG | - | chr7.4:71956239-71956258 | MS.gene040400:intron | 15.0% |
| !! | GAATGAAATTCAATAAATAA+GGG | - | chr7.4:71952821-71952840 | MS.gene040400:intron | 15.0% |
| !! | TAATGTAATAGTAATAGTAT+AGG | - | chr7.4:71953831-71953850 | MS.gene040400:intron | 15.0% |
| !! | TAATTGTTAATTAGAAGAAA+TGG | + | chr7.4:71953386-71953405 | None:intergenic | 15.0% |
| !! | TATATAAGTTTATAAAATGG+AGG | - | chr7.4:71951340-71951359 | MS.gene040400:CDS | 15.0% |
| !! | TGAATGAAATTCAATAAATA+AGG | - | chr7.4:71952820-71952839 | MS.gene040400:intron | 15.0% |
| !! | TTAAGGATTTATTACAATAA+AGG | + | chr7.4:71954657-71954676 | None:intergenic | 15.0% |
| !! | TTTACATTTCTTAAAATTTG+TGG | - | chr7.4:71950664-71950683 | MS.gene040400:CDS | 15.0% |
| !!! | AAAGTTTTTTTTCCAATAAA+TGG | - | chr7.4:71952501-71952520 | MS.gene040400:intron | 15.0% |
| !!! | AAGTTTTTTTTCCAATAAAT+GGG | - | chr7.4:71952502-71952521 | MS.gene040400:intron | 15.0% |
| !!! | AATATTTTTTTGTTTGTTTG+AGG | - | chr7.4:71954075-71954094 | MS.gene040400:intron | 15.0% |
| !!! | ACAATAAAGGTTTTTTTTTT+TGG | + | chr7.4:71954644-71954663 | None:intergenic | 15.0% |
| !!! | ATTTGTTGTTATTTAATCAA+AGG | + | chr7.4:71952168-71952187 | None:intergenic | 15.0% |
| !!! | CATGCATTTTATTATATTTT+TGG | + | chr7.4:71951175-71951194 | None:intergenic | 15.0% |
| !!! | GTAAATAGAAAATATTTTCA+TGG | + | chr7.4:71950649-71950668 | None:intergenic | 15.0% |
| !!! | TTTGTTGTTATTTAATCAAA+GGG | + | chr7.4:71952167-71952186 | None:intergenic | 15.0% |
| !!! | TTTGTTTATGCTTATTTTTA+AGG | - | chr7.4:71954184-71954203 | MS.gene040400:intron | 15.0% |
| !! | AAAAATGTAACCATAAAACT+TGG | - | chr7.4:71951722-71951741 | MS.gene040400:intron | 20.0% |
| !! | AACAAAAAACATAAACATAC+TGG | + | chr7.4:71954053-71954072 | None:intergenic | 20.0% |
| !! | AATTAAAACTGTTAGAAACA+AGG | - | chr7.4:71954564-71954583 | MS.gene040400:intron | 20.0% |
| !! | AATTATGTTAAATAAGTAGC+TGG | + | chr7.4:71954411-71954430 | None:intergenic | 20.0% |
| !! | ACAAAAAACATAAACATACT+GGG | + | chr7.4:71954052-71954071 | None:intergenic | 20.0% |
| !! | ACCACACAATAAATAATTTA+AGG | + | chr7.4:71954537-71954556 | None:intergenic | 20.0% |
| !! | AGAAAGTCTCAATTAATAAA+TGG | + | chr7.4:71954764-71954783 | None:intergenic | 20.0% |
| !! | GAAAAAAAAAGACATTTATC+TGG | + | chr7.4:71951247-71951266 | None:intergenic | 20.0% |
| !! | GAAAATGCTAACAATAAAAT+TGG | + | chr7.4:71954515-71954534 | None:intergenic | 20.0% |
| !! | TCATGTAAAAAAGTAAGTAA+TGG | + | chr7.4:71954917-71954936 | None:intergenic | 20.0% |
| !! | TCCTTAAATTATTTATTGTG+TGG | - | chr7.4:71954533-71954552 | MS.gene040400:intron | 20.0% |
| !! | TGAAGACTATTCAAATATTT+AGG | + | chr7.4:71954218-71954237 | None:intergenic | 20.0% |
| !! | TTCTTCCAAAAACAAATTTA+AGG | - | chr7.4:71953775-71953794 | MS.gene040400:intron | 20.0% |
| !! | TTTATCTGGATATGAAAAAA+AGG | + | chr7.4:71951233-71951252 | None:intergenic | 20.0% |
| !!! | AAAATAATAGCCAAGTTTTA+TGG | + | chr7.4:71951735-71951754 | None:intergenic | 20.0% |
| !!! | ACATTCCTTAAATTTGTTTT+TGG | + | chr7.4:71953783-71953802 | None:intergenic | 20.0% |
| !!! | ACATTTTTTTTTTTGCATGA+TGG | + | chr7.4:71955948-71955967 | None:intergenic | 20.0% |
| !!! | ATGCTTATTTTTAAGGAAAA+TGG | - | chr7.4:71954191-71954210 | MS.gene040400:intron | 20.0% |
| !!! | CATATTTTTGTGTTACTTTT+CGG | - | chr7.4:71952437-71952456 | MS.gene040400:intron | 20.0% |
| !!! | CATTTTTCTCTTAGATATTT+TGG | + | chr7.4:71951767-71951786 | None:intergenic | 20.0% |
| !!! | CTTTTTGGAATTTAAATAGA+CGG | - | chr7.4:71953482-71953501 | MS.gene040400:intron | 20.0% |
| !!! | TAAGCAAAAAACTACATTTT+AGG | + | chr7.4:71952297-71952316 | None:intergenic | 20.0% |
| !!! | TAATTTTGACTTGTATTTGT+AGG | + | chr7.4:71954287-71954306 | None:intergenic | 20.0% |
| !!! | TTGAGTTTTTTTTAAATACG+AGG | - | chr7.4:71955908-71955927 | MS.gene040400:intron | 20.0% |
| !!! | TTGTTGTTTTTTCTTTCAAT+CGG | - | chr7.4:71956133-71956152 | MS.gene040400:intron | 20.0% |
| !!! | TTTTTGCTTATAATAATGAC+CGG | + | chr7.4:71952198-71952217 | None:intergenic | 20.0% |
| !!! | TTTTTGGTGAAAAAATTGTT+AGG | + | chr7.4:71952371-71952390 | None:intergenic | 20.0% |
| ! | AACTTCAAATAAATCATGCT+AGG | - | chr7.4:71953161-71953180 | MS.gene040400:intron | 25.0% |
| ! | AATAGTCTTCAACATAAAAC+TGG | - | chr7.4:71954227-71954246 | MS.gene040400:intron | 25.0% |
| ! | AATGTATGTATGTATGTGTA+TGG | - | chr7.4:71953798-71953817 | MS.gene040400:intron | 25.0% |
| ! | AATTAAATGTTTATCCCTTG+TGG | + | chr7.4:71950913-71950932 | None:intergenic | 25.0% |
| ! | AGAATAAGATTCCCATTTAT+TGG | + | chr7.4:71952516-71952535 | None:intergenic | 25.0% |
| ! | AGTCAAAATTCTAATATGGA+TGG | - | chr7.4:71951907-71951926 | MS.gene040400:CDS | 25.0% |
| ! | ATAAAGAGAATGTCGTTATA+AGG | + | chr7.4:71953243-71953262 | None:intergenic | 25.0% |
| ! | ATGTATGTATGTATGTGTAT+GGG | - | chr7.4:71953799-71953818 | MS.gene040400:intron | 25.0% |
| ! | ATGTTGAGAATTTACTTGAT+AGG | - | chr7.4:71956534-71956553 | MS.gene040400:CDS | 25.0% |
| ! | ATGTTGGATAGGTTATATAT+TGG | + | chr7.4:71956452-71956471 | None:intergenic | 25.0% |
| ! | ATTGGTCAAAGTAAAATATG+TGG | + | chr7.4:71955650-71955669 | None:intergenic | 25.0% |
| ! | ATTTCTCCTCCAAAAAATTA+AGG | + | chr7.4:71952641-71952660 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr7.4:71952272-71952291 | None:intergenic | 25.0% |
| ! | CGAAAAGTAACACAAAAATA+TGG | + | chr7.4:71952439-71952458 | None:intergenic | 25.0% |
| ! | CGTCTATTTAAATTCCAAAA+AGG | + | chr7.4:71953484-71953503 | None:intergenic | 25.0% |
| ! | GAAAAAAGTTACAAAAACAG+TGG | + | chr7.4:71951211-71951230 | None:intergenic | 25.0% |
| ! | GACAATTTCTTATGTTACAT+TGG | + | chr7.4:71955468-71955487 | None:intergenic | 25.0% |
| ! | GATTATAACATAATGCACTA+TGG | - | chr7.4:71956413-71956432 | MS.gene040400:intron | 25.0% |
| ! | GTAATAATCAAGACCATAAT+CGG | + | chr7.4:71953687-71953706 | None:intergenic | 25.0% |
| ! | GTTTATATACGATGTGAATT+TGG | - | chr7.4:71953297-71953316 | MS.gene040400:intron | 25.0% |
| ! | TAAATTCCAAAAAGGTTTGA+AGG | + | chr7.4:71953476-71953495 | None:intergenic | 25.0% |
| ! | TAATTTGACCTAAAAACAAG+AGG | - | chr7.4:71954319-71954338 | MS.gene040400:intron | 25.0% |
| ! | TAGAATTTAGTTGGACAAAT+TGG | + | chr7.4:71950829-71950848 | None:intergenic | 25.0% |
| ! | TAGCAGAATTTAATCCTAAA+GGG | - | chr7.4:71955426-71955445 | MS.gene040400:intron | 25.0% |
| ! | TAGTGCATTATGTTATAATC+TGG | + | chr7.4:71956413-71956432 | None:intergenic | 25.0% |
| ! | TCTAAGAGAAAAATGACATA+TGG | - | chr7.4:71951772-71951791 | MS.gene040400:intron | 25.0% |
| ! | TTCCAGTCAAAATTCTAATA+TGG | - | chr7.4:71951903-71951922 | MS.gene040400:CDS | 25.0% |
| ! | TTGGTCAAAGTAAAATATGT+GGG | + | chr7.4:71955649-71955668 | None:intergenic | 25.0% |
| ! | TTTATAAAATGGAGGACATA+AGG | - | chr7.4:71951348-71951367 | MS.gene040400:intron | 25.0% |
| ! | TTTCTCCTCCAAAAAATTAA+GGG | + | chr7.4:71952640-71952659 | None:intergenic | 25.0% |
| ! | TTTGTCACCATGTTAAAATA+CGG | + | chr7.4:71951558-71951577 | None:intergenic | 25.0% |
| !! | ACAACAATTTTTACCTGAAT+TGG | + | chr7.4:71955721-71955740 | None:intergenic | 25.0% |
| !! | CTATTCTATTTGTCTAAAAC+TGG | - | chr7.4:71955024-71955043 | MS.gene040400:intron | 25.0% |
| !! | TTGCAATCTTAACTTTTTGA+AGG | - | chr7.4:71950999-71951018 | MS.gene040400:intron | 25.0% |
| !! | TTTATTTGTGTTACTGACTA+AGG | - | chr7.4:71956311-71956330 | MS.gene040400:intron | 25.0% |
| !!! | AATCGATTGAATTTTGAGAA+GGG | + | chr7.4:71956185-71956204 | None:intergenic | 25.0% |
| !!! | AGTGATAACCCTTAATTTTT+TGG | - | chr7.4:71952538-71952557 | MS.gene040400:intron | 25.0% |
| !!! | ATCCATATTAGAATTTTGAC+TGG | + | chr7.4:71951908-71951927 | None:intergenic | 25.0% |
| !!! | GTTTACATTATTGATTTGCT+AGG | + | chr7.4:71953338-71953357 | None:intergenic | 25.0% |
| !!! | TACACCAATTTTTTGAGAAA+GGG | + | chr7.4:71951662-71951681 | None:intergenic | 25.0% |
| !!! | TCGTGATTATTGTGTTATTT+TGG | - | chr7.4:71955835-71955854 | MS.gene040400:intron | 25.0% |
| !!! | TTACACCAATTTTTTGAGAA+AGG | + | chr7.4:71951663-71951682 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTGGAAGAAACAA+TGG | + | chr7.4:71953771-71953790 | None:intergenic | 25.0% |
| AAACAGATCACTACACTATT+TGG | - | chr7.4:71955401-71955420 | MS.gene040400:intron | 30.0% | |
| AAACCACATTCATTAGATTG+AGG | + | chr7.4:71950723-71950742 | None:intergenic | 30.0% | |
| AAATAGTGTAGTGATCTGTT+TGG | + | chr7.4:71955402-71955421 | None:intergenic | 30.0% | |
| AACACATAATCAAAAACAGC+AGG | + | chr7.4:71954846-71954865 | None:intergenic | 30.0% | |
| AACATCGAAGAATGTATTGA+TGG | - | chr7.4:71956214-71956233 | MS.gene040400:intron | 30.0% | |
| AAGGATTTATTCTGTGTACT+CGG | + | chr7.4:71956080-71956099 | None:intergenic | 30.0% | |
| AAGTTTGTGCACGATTATTA+AGG | - | chr7.4:71952706-71952725 | MS.gene040400:intron | 30.0% | |
| AATCATGCTAGGAAATTTAG+AGG | - | chr7.4:71953172-71953191 | MS.gene040400:intron | 30.0% | |
| ACTTCTCCTCCAAAAAATTA+AGG | + | chr7.4:71952550-71952569 | None:intergenic | 30.0% | |
| AGTCTCTTCTAACTTAACTA+AGG | + | chr7.4:71953565-71953584 | None:intergenic | 30.0% | |
| ATAATCGAGGTCTGTATATT+TGG | + | chr7.4:71953739-71953758 | None:intergenic | 30.0% | |
| ATCAACATCAACAAAGAACA+TGG | - | chr7.4:71955785-71955804 | MS.gene040400:intron | 30.0% | |
| ATCTGAACATAATACAACGT+GGG | - | chr7.4:71953884-71953903 | MS.gene040400:intron | 30.0% | |
| ATGTTATTACCTGAAGTTCT+TGG | + | chr7.4:71950576-71950595 | None:intergenic | 30.0% | |
| ATTACCAACTCTTTCTCTTT+AGG | + | chr7.4:71954346-71954365 | None:intergenic | 30.0% | |
| ATTATGTGTTTAGCCAAACT+GGG | - | chr7.4:71954856-71954875 | MS.gene040400:intron | 30.0% | |
| CACGAGTTAAATCTTACTTT+GGG | + | chr7.4:71955820-71955839 | None:intergenic | 30.0% | |
| CATTCATTTAATGATGCACA+TGG | - | chr7.4:71952233-71952252 | MS.gene040400:CDS | 30.0% | |
| CCACTAGCTACATTTAATAA+GGG | + | chr7.4:71952789-71952808 | None:intergenic | 30.0% | |
| CCAGCATTTATCAAATGATT+GGG | - | chr7.4:71951936-71951955 | MS.gene040400:CDS | 30.0% | |
| CTAATGCTAAAAGATATCAC+AGG | + | chr7.4:71951281-71951300 | None:intergenic | 30.0% | |
| CTAGCAGAATTTAATCCTAA+AGG | - | chr7.4:71955425-71955444 | MS.gene040400:intron | 30.0% | |
| CTTCTCAAAATTCAATCGAT+TGG | - | chr7.4:71956184-71956203 | MS.gene040400:intron | 30.0% | |
| CTTCTCCTCCAAAAAATTAA+GGG | + | chr7.4:71952549-71952568 | None:intergenic | 30.0% | |
| GACTATAATTTAGAGACAGA+GGG | + | chr7.4:71952681-71952700 | None:intergenic | 30.0% | |
| GATATTACAACATGGAGTAT+TGG | - | chr7.4:71951113-71951132 | MS.gene040400:intron | 30.0% | |
| GCACAAAAACATTGTATTGA+AGG | + | chr7.4:71955322-71955341 | None:intergenic | 30.0% | |
| GCACGATTATTAAGGAAAAA+TGG | - | chr7.4:71952714-71952733 | MS.gene040400:intron | 30.0% | |
| TAAGATTTGACTGGATATGT+CGG | - | chr7.4:71950883-71950902 | MS.gene040400:intron | 30.0% | |
| TAATCGAGGTCTGTATATTT+GGG | + | chr7.4:71953738-71953757 | None:intergenic | 30.0% | |
| TACTTCTCTTATCAACATCA+TGG | + | chr7.4:71956568-71956587 | None:intergenic | 30.0% | |
| TATAAGGTAACTCGTATGTA+CGG | + | chr7.4:71953227-71953246 | None:intergenic | 30.0% | |
| TATCTGAACATAATACAACG+TGG | - | chr7.4:71953883-71953902 | MS.gene040400:intron | 30.0% | |
| TCAAAATTCAATCGATTGGA+AGG | - | chr7.4:71956188-71956207 | MS.gene040400:intron | 30.0% | |
| TCAATCTAATGAATGTGGTT+TGG | - | chr7.4:71950722-71950741 | MS.gene040400:intron | 30.0% | |
| TCACGAGTTAAATCTTACTT+TGG | + | chr7.4:71955821-71955840 | None:intergenic | 30.0% | |
| TCCACTAGCTACATTTAATA+AGG | + | chr7.4:71952790-71952809 | None:intergenic | 30.0% | |
| TCCAGCATTTATCAAATGAT+TGG | - | chr7.4:71951935-71951954 | MS.gene040400:CDS | 30.0% | |
| TGAAGGTTACAACTAAAGAT+GGG | - | chr7.4:71951016-71951035 | MS.gene040400:intron | 30.0% | |
| TGGATAGGTTATATATTGGT+GGG | + | chr7.4:71956448-71956467 | None:intergenic | 30.0% | |
| TGGGAGTTAAATAACAACTT+GGG | - | chr7.4:71951955-71951974 | MS.gene040400:CDS | 30.0% | |
| TGTTAGAAACAAGGTTAGAT+TGG | - | chr7.4:71954573-71954592 | MS.gene040400:intron | 30.0% | |
| TTCAACGAGTAGAATTTAGT+TGG | + | chr7.4:71950838-71950857 | None:intergenic | 30.0% | |
| TTGAAGGTTACAACTAAAGA+TGG | - | chr7.4:71951015-71951034 | MS.gene040400:intron | 30.0% | |
| TTGGATAGGTTATATATTGG+TGG | + | chr7.4:71956449-71956468 | None:intergenic | 30.0% | |
| TTGGGAGTTAAATAACAACT+TGG | - | chr7.4:71951954-71951973 | MS.gene040400:CDS | 30.0% | |
| TTTATGTACCTCACCAATAA+AGG | + | chr7.4:71955197-71955216 | None:intergenic | 30.0% | |
| ! | AATCAATTTTCCTTCAGAGA+AGG | + | chr7.4:71955089-71955108 | None:intergenic | 30.0% |
| ! | ACAATTTTTACCTGAATTGG+TGG | + | chr7.4:71955718-71955737 | None:intergenic | 30.0% |
| ! | ACTAATCCTTCAAACCTTTT+TGG | - | chr7.4:71953467-71953486 | MS.gene040400:intron | 30.0% |
| ! | ATTAGCATGTGATTTTGCAA+TGG | - | chr7.4:71950952-71950971 | MS.gene040400:intron | 30.0% |
| ! | GAAAATTGACTCATGAGATT+AGG | + | chr7.4:71951798-71951817 | None:intergenic | 30.0% |
| ! | TCCTTTGGAAGAAATCAAAA+TGG | - | chr7.4:71950487-71950506 | MS.gene040400:CDS | 30.0% |
| ! | TCTATTTGTCTAAAACTGGA+AGG | - | chr7.4:71955028-71955047 | MS.gene040400:intron | 30.0% |
| ! | TTATGGTCTTGATTATTACG+TGG | - | chr7.4:71953688-71953707 | MS.gene040400:intron | 30.0% |
| ! | TTCTTTGTTGATGTTGATTG+AGG | + | chr7.4:71955783-71955802 | None:intergenic | 30.0% |
| ! | TTGATGATCTGAAGATTGTT+AGG | - | chr7.4:71951853-71951872 | MS.gene040400:intron | 30.0% |
| ! | TTTTCGGCAAACATTAATCA+TGG | - | chr7.4:71952453-71952472 | MS.gene040400:intron | 30.0% |
| !! | CAATCGATTGAATTTTGAGA+AGG | + | chr7.4:71956186-71956205 | None:intergenic | 30.0% |
| !! | GGATTAGTTTCTACAATTAC+AGG | + | chr7.4:71953455-71953474 | None:intergenic | 30.0% |
| !!! | ACACCAATTTTTTGAGAAAG+GGG | + | chr7.4:71951661-71951680 | None:intergenic | 30.0% |
| !!! | ACCATTTTGATTTCTTCCAA+AGG | + | chr7.4:71950491-71950510 | None:intergenic | 30.0% |
| !!! | GATAACCCTTAATTTTTTGG+AGG | - | chr7.4:71952541-71952560 | MS.gene040400:intron | 30.0% |
| AAAAACAGCAGGTAGATCAT+AGG | + | chr7.4:71954835-71954854 | None:intergenic | 35.0% | |
| AAATACGGAGTTTGGTTAAG+TGG | + | chr7.4:71951543-71951562 | None:intergenic | 35.0% | |
| AACAACTTGGGCTAATCATT+TGG | - | chr7.4:71951967-71951986 | MS.gene040400:CDS | 35.0% | |
| AATTAATCTTCTGCCCAGTT+TGG | + | chr7.4:71954872-71954891 | None:intergenic | 35.0% | |
| ACTCCATGTTGTAATATCAC+CGG | + | chr7.4:71951111-71951130 | None:intergenic | 35.0% | |
| AGTCTTCAACATAAAACTGG+AGG | - | chr7.4:71954230-71954249 | MS.gene040400:intron | 35.0% | |
| ATAACAACAAATACACCCTC+CGG | - | chr7.4:71952176-71952195 | MS.gene040400:intron | 35.0% | |
| ATACAAATGCCAAGAACTTC+AGG | - | chr7.4:71950564-71950583 | MS.gene040400:CDS | 35.0% | |
| ATGAAGATAGGTAGATCATG+TGG | + | chr7.4:71956476-71956495 | None:intergenic | 35.0% | |
| ATGCACTATCATTACTTGTG+AGG | - | chr7.4:71951489-71951508 | MS.gene040400:CDS | 35.0% | |
| ATGTGGCTTAGATAAGCAAT+AGG | + | chr7.4:71955142-71955161 | None:intergenic | 35.0% | |
| CCAAATCTCACTCATTAAGT+GGG | - | chr7.4:71950786-71950805 | MS.gene040400:intron | 35.0% | |
| CCATGATCTGCTAGAATTAA+AGG | + | chr7.4:71953957-71953976 | None:intergenic | 35.0% | |
| CCATGTTAAAATACGGAGTT+TGG | + | chr7.4:71951551-71951570 | None:intergenic | 35.0% | |
| CCCAATCATTTGATAAATGC+TGG | + | chr7.4:71951939-71951958 | None:intergenic | 35.0% | |
| CCCTTATTAAATGTAGCTAG+TGG | - | chr7.4:71952786-71952805 | MS.gene040400:intron | 35.0% | |
| CCTTTAATTCTAGCAGATCA+TGG | - | chr7.4:71953954-71953973 | MS.gene040400:intron | 35.0% | |
| CGACTATAATTTAGAGACAG+AGG | + | chr7.4:71952682-71952701 | None:intergenic | 35.0% | |
| CTACCTATCTTCATTAGCTA+TGG | - | chr7.4:71956482-71956501 | MS.gene040400:intron | 35.0% | |
| CTTCTATGTTCTTACCCTTT+AGG | + | chr7.4:71955443-71955462 | None:intergenic | 35.0% | |
| GACTTTCTGTGTAAATATGC+AGG | - | chr7.4:71954776-71954795 | MS.gene040400:intron | 35.0% | |
| GATATCACAGGAAAAAGAGA+AGG | + | chr7.4:71951269-71951288 | None:intergenic | 35.0% | |
| GATTATGTGTTTAGCCAAAC+TGG | - | chr7.4:71954855-71954874 | MS.gene040400:intron | 35.0% | |
| TAACATGGTGACAAAAAGTG+CGG | - | chr7.4:71951563-71951582 | MS.gene040400:intron | 35.0% | |
| TACCTCACCAATAAAGGATT+TGG | + | chr7.4:71955191-71955210 | None:intergenic | 35.0% | |
| TCATGGAGTTTACGATTTGA+CGG | + | chr7.4:71950632-71950651 | None:intergenic | 35.0% | |
| TCCTACGAATACCTCTAATT+CGG | - | chr7.4:71950605-71950624 | MS.gene040400:CDS | 35.0% | |
| TGAGATTTGGCTGAACTAAT+TGG | + | chr7.4:71950776-71950795 | None:intergenic | 35.0% | |
| TGCTTATAATAATGACCGGA+GGG | + | chr7.4:71952194-71952213 | None:intergenic | 35.0% | |
| TGCTTATATTAGTGACCAGA+GGG | - | chr7.4:71952311-71952330 | MS.gene040400:intron | 35.0% | |
| TGTGGCTTAGATAAGCAATA+GGG | + | chr7.4:71955141-71955160 | None:intergenic | 35.0% | |
| TTCAACGACTAAGATTTGAC+TGG | - | chr7.4:71950874-71950893 | MS.gene040400:intron | 35.0% | |
| TTGCTAGGTTTAAGTGTTAG+TGG | + | chr7.4:71953323-71953342 | None:intergenic | 35.0% | |
| TTGCTTATAATAATGACCGG+AGG | + | chr7.4:71952195-71952214 | None:intergenic | 35.0% | |
| TTGCTTATATTAGTGACCAG+AGG | - | chr7.4:71952310-71952329 | MS.gene040400:intron | 35.0% | |
| TTGGGCTAATCATTTGGTTA+AGG | - | chr7.4:71951973-71951992 | MS.gene040400:CDS | 35.0% | |
| ! | ACATAAACATACTGGGTTAG+AGG | + | chr7.4:71954045-71954064 | None:intergenic | 35.0% |
| ! | ATAAACATACTGGGTTAGAG+GGG | + | chr7.4:71954043-71954062 | None:intergenic | 35.0% |
| ! | CATAAACATACTGGGTTAGA+GGG | + | chr7.4:71954044-71954063 | None:intergenic | 35.0% |
| ! | CTCATGCTGATTACATTATG+GGG | - | chr7.4:71956609-71956628 | MS.gene040400:CDS | 35.0% |
| ! | GCTCATGCTGATTACATTAT+GGG | - | chr7.4:71956608-71956627 | MS.gene040400:CDS | 35.0% |
| ! | GGTGATTTCAAGTACAAGTT+GGG | + | chr7.4:71953666-71953685 | None:intergenic | 35.0% |
| ! | GTACTTGAAATCACCGATTA+TGG | - | chr7.4:71953671-71953690 | MS.gene040400:intron | 35.0% |
| ! | TGCTCATGCTGATTACATTA+TGG | - | chr7.4:71956607-71956626 | MS.gene040400:CDS | 35.0% |
| !! | ATTAAAGGCAAGTCTTGTTC+TGG | + | chr7.4:71953942-71953961 | None:intergenic | 35.0% |
| !! | ATTACAACATGGAGTATTGG+TGG | - | chr7.4:71951116-71951135 | MS.gene040400:intron | 35.0% |
| !! | GAATTTTGAGAAGGGAGTTA+GGG | + | chr7.4:71956177-71956196 | None:intergenic | 35.0% |
| !! | TGAATTTTGAGAAGGGAGTT+AGG | + | chr7.4:71956178-71956197 | None:intergenic | 35.0% |
| !! | TTTTGGAAGAAACAATGGCA+GGG | + | chr7.4:71953766-71953785 | None:intergenic | 35.0% |
| !! | TTTTTGGAAGAAACAATGGC+AGG | + | chr7.4:71953767-71953786 | None:intergenic | 35.0% |
| !!! | CCAAACTCCGTATTTTAACA+TGG | - | chr7.4:71951548-71951567 | MS.gene040400:intron | 35.0% |
| !!! | CTTTAGGACCTCTTGTTTTT+AGG | + | chr7.4:71954330-71954349 | None:intergenic | 35.0% |
| !!! | GCGTGATAGTACTGTTTTTT+TGG | + | chr7.4:71952387-71952406 | None:intergenic | 35.0% |
| AACAAAGAACATGGTGCACT+TGG | - | chr7.4:71955794-71955813 | MS.gene040400:intron | 40.0% | |
| AACAATGTCCGTGTTTCACT+TGG | + | chr7.4:71955261-71955280 | None:intergenic | 40.0% | |
| AACTATGCAGTTGTTAGACG+TGG | - | chr7.4:71956359-71956378 | MS.gene040400:intron | 40.0% | |
| AAGTCGTAGCAGTCAATTCT+AGG | + | chr7.4:71955596-71955615 | None:intergenic | 40.0% | |
| ACACGACTTGAAGCTTGATA+AGG | + | chr7.4:71950466-71950485 | None:intergenic | 40.0% | |
| ACTATGCAGTTGTTAGACGT+GGG | - | chr7.4:71956360-71956379 | MS.gene040400:intron | 40.0% | |
| AGAGTTGAAGGTAGAAATGG+TGG | - | chr7.4:71951072-71951091 | MS.gene040400:intron | 40.0% | |
| AGCACATAGAGACTTGAGAA+AGG | + | chr7.4:71955570-71955589 | None:intergenic | 40.0% | |
| AGCCAAATCCTTTATTGGTG+AGG | - | chr7.4:71955186-71955205 | MS.gene040400:intron | 40.0% | |
| AGGTAGATCATGTGGAATGT+TGG | + | chr7.4:71956468-71956487 | None:intergenic | 40.0% | |
| AGGTCCTAAAGAGAAAGAGT+TGG | - | chr7.4:71954339-71954358 | MS.gene040400:intron | 40.0% | |
| AGTCGTAGCAGTCAATTCTA+GGG | + | chr7.4:71955595-71955614 | None:intergenic | 40.0% | |
| ATATGCCTTCATCCAAAGGA+GGG | + | chr7.4:71950519-71950538 | None:intergenic | 40.0% | |
| ATTCCAGAAGGTAGAGTTGA+AGG | - | chr7.4:71951060-71951079 | MS.gene040400:intron | 40.0% | |
| CAACCGGTGATATTACAACA+TGG | - | chr7.4:71951105-71951124 | MS.gene040400:intron | 40.0% | |
| CAGGAGCAACAACATGTTAA+TGG | - | chr7.4:71953200-71953219 | MS.gene040400:intron | 40.0% | |
| CATGGAGTTTACGATTTGAC+GGG | + | chr7.4:71950631-71950650 | None:intergenic | 40.0% | |
| CCCACTTAATGAGTGAGATT+TGG | + | chr7.4:71950789-71950808 | None:intergenic | 40.0% | |
| CCTATCTTCATTAGCTATGG+AGG | - | chr7.4:71956485-71956504 | MS.gene040400:intron | 40.0% | |
| CCTCCATAGCTAATGAAGAT+AGG | + | chr7.4:71956488-71956507 | None:intergenic | 40.0% | |
| CGACCTCAATCTAATGAATG+TGG | - | chr7.4:71950717-71950736 | MS.gene040400:intron | 40.0% | |
| CGTCCCCTTTCTCAAAAAAT+TGG | - | chr7.4:71951655-71951674 | MS.gene040400:CDS | 40.0% | |
| GAGTTGAAGGTAGAAATGGT+GGG | - | chr7.4:71951073-71951092 | MS.gene040400:intron | 40.0% | |
| GATCATGTGGAATGTTGGAT+AGG | + | chr7.4:71956463-71956482 | None:intergenic | 40.0% | |
| GATTATTACGTGGTCAAGCA+TGG | - | chr7.4:71953698-71953717 | MS.gene040400:intron | 40.0% | |
| GCCAAATCTCACTCATTAAG+TGG | - | chr7.4:71950785-71950804 | MS.gene040400:intron | 40.0% | |
| GGGCAGAAGATTAATTACGT+TGG | - | chr7.4:71954876-71954895 | MS.gene040400:intron | 40.0% | |
| GGTAGAGTTGAAGGTAGAAA+TGG | - | chr7.4:71951069-71951088 | MS.gene040400:intron | 40.0% | |
| GTTGCAGCCAAATCCTTTAT+TGG | - | chr7.4:71955181-71955200 | MS.gene040400:intron | 40.0% | |
| GTTTGGATTGCTAACACTAG+AGG | - | chr7.4:71953984-71954003 | MS.gene040400:intron | 40.0% | |
| TAAAACTGGAAGGCTGTGTT+TGG | - | chr7.4:71955038-71955057 | MS.gene040400:intron | 40.0% | |
| TCATCACACCAAGTGAAACA+CGG | - | chr7.4:71955250-71955269 | MS.gene040400:intron | 40.0% | |
| TGAACTAATTGGATACGCAG+AGG | + | chr7.4:71950765-71950784 | None:intergenic | 40.0% | |
| TTCGTAAATGCCACCAATTC+AGG | - | chr7.4:71955705-71955724 | MS.gene040400:intron | 40.0% | |
| TTTGAGTGTCCGACACATAT+TGG | + | chr7.4:71955295-71955314 | None:intergenic | 40.0% | |
| ! | AACACGGACATTGTTTCTCT+CGG | - | chr7.4:71955266-71955285 | MS.gene040400:intron | 40.0% |
| ! | CGGTGATTTCAAGTACAAGT+TGG | + | chr7.4:71953667-71953686 | None:intergenic | 40.0% |
| ! | GACTTGATGACTGCATTAAC+TGG | - | chr7.4:71955611-71955630 | MS.gene040400:intron | 40.0% |
| ! | GTGTAAATATGCAGGCCTTT+TGG | - | chr7.4:71954784-71954803 | MS.gene040400:intron | 40.0% |
| !! | AGGAAATTTAGAGGAGTGTC+AGG | - | chr7.4:71953181-71953200 | MS.gene040400:intron | 40.0% |
| !! | ATAAAGCTGCTGATTTCAGC+TGG | + | chr7.4:71955114-71955133 | None:intergenic | 40.0% |
| !! | ATGGAGTATTGGTGGTAAGT+TGG | - | chr7.4:71951124-71951143 | MS.gene040400:intron | 40.0% |
| !! | CAGATCATGGCTTTGATGTT+TGG | - | chr7.4:71953967-71953986 | MS.gene040400:intron | 40.0% |
| !!! | ATATGCAGGCCTTTTGGAAT+TGG | - | chr7.4:71954790-71954809 | MS.gene040400:intron | 40.0% |
| ACATAATACAACGTGGGTGC+AGG | - | chr7.4:71953890-71953909 | MS.gene040400:intron | 45.0% | |
| ACGCTGCTGCATGTTGAATT+CGG | - | chr7.4:71953527-71953546 | MS.gene040400:intron | 45.0% | |
| ATTCCGCGTCTGTTACATTG+TGG | - | chr7.4:71951587-71951606 | MS.gene040400:intron | 45.0% | |
| CATATGCCTTCATCCAAAGG+AGG | + | chr7.4:71950520-71950539 | None:intergenic | 45.0% | |
| CTACCTTCAACTCTACCTTC+TGG | + | chr7.4:71951066-71951085 | None:intergenic | 45.0% | |
| CTATGCAGTTGTTAGACGTG+GGG | - | chr7.4:71956361-71956380 | MS.gene040400:intron | 45.0% | |
| GATATGTCGGACAACCACAA+GGG | - | chr7.4:71950896-71950915 | MS.gene040400:intron | 45.0% | |
| GCACATATGCCTTCATCCAA+AGG | + | chr7.4:71950523-71950542 | None:intergenic | 45.0% | |
| GCATGTTGAATTCGGACTCA+AGG | - | chr7.4:71953535-71953554 | MS.gene040400:intron | 45.0% | |
| GCTTCTGCTGTCATTGTTCA+TGG | - | chr7.4:71950541-71950560 | MS.gene040400:CDS | 45.0% | |
| GTCCCAAGACCAATTCCAAA+AGG | + | chr7.4:71954802-71954821 | None:intergenic | 45.0% | |
| TAATTACGTTGGCCACTCTC+TGG | - | chr7.4:71954887-71954906 | MS.gene040400:intron | 45.0% | |
| TCTCGGACACCAATATGTGT+CGG | - | chr7.4:71955283-71955302 | MS.gene040400:intron | 45.0% | |
| TGACTTCCTTAACCAGTGTC+CGG | - | chr7.4:71952124-71952143 | MS.gene040400:intron | 45.0% | |
| TTGACCCTTAACAAGTGTCC+CGG | + | chr7.4:71952020-71952039 | None:intergenic | 45.0% | |
| ! | AAATGGTGTTAGCCCTCCTT+TGG | - | chr7.4:71950504-71950523 | MS.gene040400:CDS | 45.0% |
| ! | AAGGTAGAAATGGTGGGACT+AGG | - | chr7.4:71951079-71951098 | MS.gene040400:intron | 45.0% |
| ! | AGTAATGGAGTACCAGAGAG+TGG | + | chr7.4:71954902-71954921 | None:intergenic | 45.0% |
| ! | ATTTTCTCGACTACACCCTC+TGG | + | chr7.4:71952329-71952348 | None:intergenic | 45.0% |
| ! | GACAGAGGGAGTATGAGAAA+AGG | + | chr7.4:71952667-71952686 | None:intergenic | 45.0% |
| ! | GCTTTAGCTTCCTTCTCTGA+AGG | - | chr7.4:71955076-71955095 | MS.gene040400:intron | 45.0% |
| ! | GGTACATTTTGAGCCTGCAA+AGG | - | chr7.4:71951037-71951056 | MS.gene040400:intron | 45.0% |
| ! | TGAATGTGGTTTGGCTGAAC+AGG | - | chr7.4:71950731-71950750 | MS.gene040400:intron | 45.0% |
| !! | AAAGGCAAGTCTTGTTCTGG+AGG | + | chr7.4:71953939-71953958 | None:intergenic | 45.0% |
| !! | AAGGCAAGTCTTGTTCTGGA+GGG | + | chr7.4:71953938-71953957 | None:intergenic | 45.0% |
| !! | GACTTGAGAAAGGCATCAAC+AGG | + | chr7.4:71955560-71955579 | None:intergenic | 45.0% |
| !! | GCCGAATTAGAGGTATTCGT+AGG | + | chr7.4:71950609-71950628 | None:intergenic | 45.0% |
| !! | TACCTTCTGGAATCCTTTGC+AGG | + | chr7.4:71951053-71951072 | None:intergenic | 45.0% |
| !!! | AGGCCTTTTGGAATTGGTCT+TGG | - | chr7.4:71954796-71954815 | MS.gene040400:intron | 45.0% |
| !!! | GGCCTTTTGGAATTGGTCTT+GGG | - | chr7.4:71954797-71954816 | MS.gene040400:intron | 45.0% |
| !! | AAATATATAAGTTTATAAAA+TGG | - | chr7.4:71951337-71951356 | MS.gene040400:CDS | 5.0% |
| !! | AATATATAAAATATTAATTG+GGG | + | chr7.4:71955507-71955526 | None:intergenic | 5.0% |
| !! | ATTATAATTGAAATATTTAA+AGG | + | chr7.4:71956099-71956118 | None:intergenic | 5.0% |
| !! | TTAAATATTTCAATTATAAT+TGG | - | chr7.4:71956099-71956118 | MS.gene040400:intron | 5.0% |
| AATACAACGTGGGTGCAGGA+TGG | - | chr7.4:71953894-71953913 | MS.gene040400:intron | 50.0% | |
| AATGTTAACCAGTGCCCACC+CGG | - | chr7.4:71951998-71952017 | MS.gene040400:CDS | 50.0% | |
| ACGCCACAATGTAACAGACG+CGG | + | chr7.4:71951593-71951612 | None:intergenic | 50.0% | |
| AGAAGGGAGTTAGGGCACAT+TGG | + | chr7.4:71956169-71956188 | None:intergenic | 50.0% | |
| AGCCACATGAACACTGCACT+TGG | - | chr7.4:71955154-71955173 | MS.gene040400:intron | 50.0% | |
| AGCCTGCAAAGGATTCCAGA+AGG | - | chr7.4:71951048-71951067 | MS.gene040400:intron | 50.0% | |
| AGGGGTCCAATGAGACATGT+CGG | + | chr7.4:71954025-71954044 | None:intergenic | 50.0% | |
| CACCAAGTGCAGTGTTCATG+TGG | + | chr7.4:71955159-71955178 | None:intergenic | 50.0% | |
| GACAAATTGGACGACTGCAG+TGG | + | chr7.4:71950816-71950835 | None:intergenic | 50.0% | |
| GACTTCCTTAACCAGTGTCC+GGG | - | chr7.4:71952125-71952144 | MS.gene040400:intron | 50.0% | |
| GCTTCAAGTCGTGTCTCCTT+TGG | - | chr7.4:71950472-71950491 | MS.gene040400:CDS | 50.0% | |
| GGATATGTCGGACAACCACA+AGG | - | chr7.4:71950895-71950914 | MS.gene040400:intron | 50.0% | |
| GTTAGCCCTCCTTTGGATGA+AGG | - | chr7.4:71950511-71950530 | MS.gene040400:CDS | 50.0% | |
| TAGTCGCCGACATGTCTCAT+TGG | - | chr7.4:71954016-71954035 | MS.gene040400:intron | 50.0% | |
| TGACCCTTAACAAGTGTCCC+GGG | + | chr7.4:71952019-71952038 | None:intergenic | 50.0% | |
| TGGTGGGACTAGGAAACAAC+CGG | - | chr7.4:71951089-71951108 | MS.gene040400:intron | 50.0% | |
| ! | GATTTGACGGGCCGAATTAG+AGG | + | chr7.4:71950619-71950638 | None:intergenic | 50.0% |
| ! | TGTGGTTTGGCTGAACAGGT+TGG | - | chr7.4:71950735-71950754 | MS.gene040400:intron | 50.0% |
| !! | GGTCTTGTTAACCAGTGTCC+CGG | + | chr7.4:71952146-71952165 | None:intergenic | 50.0% |
| ACTGGAAGGCTGTGTTTGGC+AGG | - | chr7.4:71955042-71955061 | MS.gene040400:intron | 55.0% | |
| ATGGCAGGGCTGCATAATCG+AGG | + | chr7.4:71953752-71953771 | None:intergenic | 55.0% | |
| ATGTTAACCAGTGCCCACCC+GGG | - | chr7.4:71951999-71952018 | MS.gene040400:CDS | 55.0% | |
| CCTTAACAAGTGTCCCGGGT+GGG | + | chr7.4:71952015-71952034 | None:intergenic | 55.0% | |
| CTGGAAGGCTGTGTTTGGCA+GGG | - | chr7.4:71955043-71955062 | MS.gene040400:intron | 55.0% | |
| GGGAGTTAGGGCACATTGGT+CGG | + | chr7.4:71956165-71956184 | None:intergenic | 55.0% | |
| TTAACCAGTGTCCCGGACAC+TGG | + | chr7.4:71952139-71952158 | None:intergenic | 55.0% | |
| TTAACCAGTGTCCGGGACAC+TGG | - | chr7.4:71952132-71952151 | MS.gene040400:intron | 55.0% | |
| ! | AGTGTCCCGGACACTGGTTA+AGG | + | chr7.4:71952133-71952152 | None:intergenic | 55.0% |
| ! | CCACCCGGGACACTTGTTAA+GGG | - | chr7.4:71952013-71952032 | MS.gene040400:intron | 55.0% |
| CCCTTAACAAGTGTCCCGGG+TGG | + | chr7.4:71952016-71952035 | None:intergenic | 60.0% | |
| GGGTGCAGGATGGCATGACA+TGG | - | chr7.4:71953904-71953923 | MS.gene040400:intron | 60.0% | |
| ! | CCCACCCGGGACACTTGTTA+AGG | - | chr7.4:71952012-71952031 | MS.gene040400:intron | 60.0% |
| CAAGTGTCCCGGGTGGGCAC+TGG | + | chr7.4:71952009-71952028 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 71950397 | 71956694 | 71950397 | ID=MS.gene040400 |
| chr7.4 | mRNA | 71950397 | 71956694 | 71950397 | ID=MS.gene040400.t1;Parent=MS.gene040400 |
| chr7.4 | exon | 71956506 | 71956694 | 71956506 | ID=MS.gene040400.t1.exon1;Parent=MS.gene040400.t1 |
| chr7.4 | CDS | 71956506 | 71956694 | 71956506 | ID=cds.MS.gene040400.t1;Parent=MS.gene040400.t1 |
| chr7.4 | exon | 71955954 | 71956070 | 71955954 | ID=MS.gene040400.t1.exon2;Parent=MS.gene040400.t1 |
| chr7.4 | CDS | 71955954 | 71956070 | 71955954 | ID=cds.MS.gene040400.t1;Parent=MS.gene040400.t1 |
| chr7.4 | exon | 71953039 | 71953179 | 71953039 | ID=MS.gene040400.t1.exon3;Parent=MS.gene040400.t1 |
| chr7.4 | CDS | 71953039 | 71953179 | 71953039 | ID=cds.MS.gene040400.t1;Parent=MS.gene040400.t1 |
| chr7.4 | exon | 71952183 | 71952293 | 71952183 | ID=MS.gene040400.t1.exon4;Parent=MS.gene040400.t1 |
| chr7.4 | CDS | 71952183 | 71952293 | 71952183 | ID=cds.MS.gene040400.t1;Parent=MS.gene040400.t1 |
| chr7.4 | exon | 71951884 | 71952027 | 71951884 | ID=MS.gene040400.t1.exon5;Parent=MS.gene040400.t1 |
| chr7.4 | CDS | 71951884 | 71952027 | 71951884 | ID=cds.MS.gene040400.t1;Parent=MS.gene040400.t1 |
| chr7.4 | exon | 71951644 | 71951684 | 71951644 | ID=MS.gene040400.t1.exon6;Parent=MS.gene040400.t1 |
| chr7.4 | CDS | 71951644 | 71951684 | 71951644 | ID=cds.MS.gene040400.t1;Parent=MS.gene040400.t1 |
| chr7.4 | exon | 71951459 | 71951538 | 71951459 | ID=MS.gene040400.t1.exon7;Parent=MS.gene040400.t1 |
| chr7.4 | CDS | 71951459 | 71951538 | 71951459 | ID=cds.MS.gene040400.t1;Parent=MS.gene040400.t1 |
| chr7.4 | exon | 71951269 | 71951364 | 71951269 | ID=MS.gene040400.t1.exon8;Parent=MS.gene040400.t1 |
| chr7.4 | CDS | 71951269 | 71951364 | 71951269 | ID=cds.MS.gene040400.t1;Parent=MS.gene040400.t1 |
| chr7.4 | exon | 71950397 | 71950722 | 71950397 | ID=MS.gene040400.t1.exon9;Parent=MS.gene040400.t1 |
| chr7.4 | CDS | 71950397 | 71950722 | 71950397 | ID=cds.MS.gene040400.t1;Parent=MS.gene040400.t1 |
| Gene Sequence |
| Protein sequence |
