Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029607.t1 | XP_013470044.1 | 93.5 | 356 | 21 | 1 | 1 | 356 | 52 | 405 | 8.00E-190 | 672.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029607.t1 | Q71DJ5 | 63.9 | 355 | 117 | 1 | 1 | 355 | 49 | 392 | 2.8e-135 | 483.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029607.t1 | A0A072VQK3 | 93.5 | 356 | 21 | 1 | 1 | 356 | 52 | 405 | 5.8e-190 | 672.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene040399 | MS.gene029607 | PPI |
| MS.gene029607 | MS.gene040400 | PPI |
| MS.gene029607 | MS.gene060065 | PPI |
| MS.gene029607 | MS.gene62511 | PPI |
| MS.gene79184 | MS.gene029607 | PPI |
| MS.gene029607 | MS.gene040398 | PPI |
| MS.gene060063 | MS.gene029607 | PPI |
| MS.gene029607 | MS.gene060064 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029607.t1 | MTR_1g107330 | 98.596 | 356 | 3 | 2 | 1 | 356 | 52 | 405 | 0.0 | 723 |
| MS.gene029607.t1 | MTR_1g107330 | 98.394 | 249 | 2 | 2 | 1 | 249 | 52 | 298 | 3.21e-180 | 503 |
| MS.gene029607.t1 | MTR_5g084950 | 40.678 | 354 | 192 | 5 | 1 | 348 | 59 | 400 | 2.50e-99 | 300 |
| MS.gene029607.t1 | MTR_7g081050 | 41.226 | 359 | 187 | 6 | 1 | 349 | 60 | 404 | 3.60e-97 | 294 |
| MS.gene029607.t1 | MTR_7g029365 | 40.169 | 356 | 200 | 4 | 1 | 350 | 64 | 412 | 1.58e-96 | 293 |
| MS.gene029607.t1 | MTR_3g081060 | 42.297 | 357 | 188 | 5 | 1 | 349 | 64 | 410 | 1.82e-96 | 293 |
| MS.gene029607.t1 | MTR_6g033965 | 43.343 | 353 | 182 | 5 | 3 | 349 | 63 | 403 | 6.75e-95 | 288 |
| MS.gene029607.t1 | MTR_3g081040 | 39.888 | 356 | 197 | 5 | 1 | 349 | 60 | 405 | 5.39e-93 | 283 |
| MS.gene029607.t1 | MTR_7g081060 | 40.678 | 354 | 193 | 5 | 1 | 348 | 61 | 403 | 6.31e-91 | 278 |
| MS.gene029607.t1 | MTR_3g080980 | 40.000 | 355 | 197 | 6 | 1 | 349 | 60 | 404 | 2.89e-86 | 266 |
| MS.gene029607.t1 | MTR_6g033975 | 41.690 | 355 | 184 | 8 | 3 | 349 | 63 | 402 | 9.31e-85 | 262 |
| MS.gene029607.t1 | MTR_6g023740 | 34.746 | 354 | 217 | 6 | 3 | 348 | 65 | 412 | 1.77e-80 | 252 |
| MS.gene029607.t1 | MTR_6g023715 | 34.085 | 355 | 203 | 7 | 1 | 348 | 63 | 393 | 1.47e-76 | 241 |
| MS.gene029607.t1 | MTR_6g023750 | 33.146 | 356 | 224 | 6 | 1 | 348 | 6 | 355 | 1.82e-73 | 232 |
| MS.gene029607.t1 | MTR_7g029365 | 42.400 | 250 | 136 | 2 | 1 | 249 | 64 | 306 | 3.01e-68 | 217 |
| MS.gene029607.t1 | MTR_0595s0010 | 40.964 | 166 | 91 | 3 | 3 | 167 | 65 | 224 | 1.90e-39 | 142 |
| MS.gene029607.t1 | MTR_5g006650 | 43.382 | 136 | 68 | 2 | 37 | 168 | 63 | 193 | 1.84e-33 | 124 |
| MS.gene029607.t1 | MTR_5g049630 | 65.385 | 52 | 11 | 1 | 218 | 269 | 34 | 78 | 2.68e-15 | 71.2 |
| MS.gene029607.t1 | MTR_5g049820 | 90.625 | 32 | 3 | 0 | 218 | 249 | 903 | 934 | 7.05e-13 | 70.5 |
| MS.gene029607.t1 | MTR_7g451290 | 85.294 | 34 | 2 | 1 | 219 | 249 | 65 | 98 | 1.55e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029607.t1 | AT2G15230 | 63.944 | 355 | 117 | 1 | 1 | 355 | 49 | 392 | 2.19e-175 | 493 |
| MS.gene029607.t1 | AT5G14180 | 38.418 | 354 | 206 | 5 | 1 | 348 | 68 | 415 | 7.42e-91 | 278 |
| MS.gene029607.t1 | AT5G14180 | 40.065 | 307 | 178 | 3 | 48 | 348 | 9 | 315 | 2.63e-83 | 256 |
| MS.gene029607.t1 | AT5G14180 | 40.000 | 305 | 177 | 3 | 50 | 348 | 2 | 306 | 4.46e-83 | 255 |
| MS.gene029607.t1 | AT5G14180 | 39.200 | 250 | 145 | 3 | 1 | 249 | 68 | 311 | 8.54e-64 | 206 |
| MS.gene029607.t1 | AT5G14180 | 37.900 | 219 | 129 | 3 | 1 | 218 | 68 | 280 | 2.27e-50 | 170 |
Find 72 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCCTTTGTTGATGGCTTA+TGG | 0.191042 | 1.3:+73447945 | MS.gene029607:CDS |
| CAGATCATTGCCTTTGTTGA+TGG | 0.268391 | 1.3:+73447938 | MS.gene029607:CDS |
| ACCTTCTCCAAGTACGATTA+TGG | 0.280197 | 1.3:+73447849 | MS.gene029607:CDS |
| ACAAAGGATGGTTTCTTGTT+AGG | 0.282718 | 1.3:+73442993 | MS.gene029607:CDS |
| TGCCTTTGTTGATGGCTTAT+GGG | 0.286118 | 1.3:+73447946 | MS.gene029607:CDS |
| ATATGATCCAAGTATGAAAT+TGG | 0.303318 | 1.3:-73445349 | None:intergenic |
| GCTTCTCCATGGCCTATTCA+TGG | 0.309670 | 1.3:+73443103 | MS.gene029607:CDS |
| ATGCGGCTAAGGTCAAATTT+TGG | 0.319645 | 1.3:-73447912 | None:intergenic |
| TCTGTCTCCAATTTCATACT+TGG | 0.350785 | 1.3:+73445342 | MS.gene029607:CDS |
| ATCAGTTTCTTCAAGTCAAT+GGG | 0.364667 | 1.3:+73448116 | MS.gene029607:CDS |
| CATCAGTTTCTTCAAGTCAA+TGG | 0.364835 | 1.3:+73448115 | MS.gene029607:CDS |
| AACTCAAAGTTATTTGTAGT+TGG | 0.368834 | 1.3:+73445154 | MS.gene029607:CDS |
| GGATCATATTAGTGCACCTT+TGG | 0.375065 | 1.3:+73445363 | MS.gene029607:CDS |
| TGCACCTTTGGTACTAAGAA+TGG | 0.380394 | 1.3:+73445375 | MS.gene029607:CDS |
| ACTCAAAGTTATTTGTAGTT+GGG | 0.404963 | 1.3:+73445155 | MS.gene029607:CDS |
| ATCTTTATCAGAGAAGAATA+AGG | 0.417364 | 1.3:+73443997 | MS.gene029607:CDS |
| ACATAAGGAAATCAAGAGAT+TGG | 0.417842 | 1.3:-73445664 | None:intergenic |
| GACATGCTGTCATCCATTAC+AGG | 0.418206 | 1.3:+73445708 | MS.gene029607:CDS |
| GTGGTTTATCTTGAAAACTA+TGG | 0.418535 | 1.3:+73448038 | MS.gene029607:CDS |
| AGTAAGTAGTAACCATGAAT+AGG | 0.420033 | 1.3:-73443115 | None:intergenic |
| AAATACACCAGAACAATCAT+TGG | 0.421081 | 1.3:+73443898 | MS.gene029607:CDS |
| AAGCTTTCCATAATCGTACT+TGG | 0.430219 | 1.3:-73447856 | None:intergenic |
| GGAAAAGATGCACATTGATC+AGG | 0.447013 | 1.3:+73445396 | MS.gene029607:CDS |
| CATCAACAAAGGCAATGATC+TGG | 0.449214 | 1.3:-73447937 | None:intergenic |
| GGCTTCATCCTTGCGGATCA+AGG | 0.449610 | 1.3:+73443920 | MS.gene029607:CDS |
| TTCATCAGCTGAATTTCAAA+AGG | 0.450695 | 1.3:+73445522 | MS.gene029607:CDS |
| GACTTGAAGAAACTGATGAT+AGG | 0.472607 | 1.3:-73448110 | None:intergenic |
| ATGAAGCCCAATGATTGTTC+TGG | 0.479529 | 1.3:-73443905 | None:intergenic |
| AGGCCATGGAGAAGCAGAAC+CGG | 0.486022 | 1.3:-73443095 | None:intergenic |
| GCCTTTGTTGATGGCTTATG+GGG | 0.492263 | 1.3:+73447947 | MS.gene029607:CDS |
| ATGATCTGGGTATGCGGCTA+AGG | 0.493826 | 1.3:-73447923 | None:intergenic |
| TCATTTCCGCAAGATCGTAC+AGG | 0.501400 | 1.3:-73445108 | None:intergenic |
| ATTTGTAGTTGGGCATTCAC+AGG | 0.502438 | 1.3:+73445165 | MS.gene029607:CDS |
| CATGGAACATACTCTGGAAA+AGG | 0.507066 | 1.3:-73446777 | None:intergenic |
| CCTCCGGTTCTGCTTCTCCA+TGG | 0.509579 | 1.3:+73443092 | MS.gene029607:CDS |
| TTACTTTCAGATTGAAACAA+AGG | 0.517112 | 1.3:+73442977 | None:intergenic |
| TCAACCGGATATAGTAGAAA+AGG | 0.520659 | 1.3:+73445303 | MS.gene029607:CDS |
| TGTTCAGATGATTGCTACAA+TGG | 0.521008 | 1.3:+73445496 | MS.gene029607:intron |
| GTTCAGATGATTGCTACAAT+GGG | 0.525033 | 1.3:+73445497 | MS.gene029607:intron |
| CTGATAAAGATTTATGTCCA+TGG | 0.529374 | 1.3:-73443985 | None:intergenic |
| TGAGAGACATGAACCTGTAA+TGG | 0.530576 | 1.3:-73445721 | None:intergenic |
| ACAACAACAACGAGGTCCTC+CGG | 0.531545 | 1.3:+73443076 | MS.gene029607:CDS |
| TACTATATCCGGTTGAGTGA+AGG | 0.532690 | 1.3:-73445296 | None:intergenic |
| ATCAACAAAGGCAATGATCT+GGG | 0.532780 | 1.3:-73447936 | None:intergenic |
| ACTTGAAGAAACTGATGATA+GGG | 0.535072 | 1.3:-73448109 | None:intergenic |
| GCAGTTCCTTGAGTGTGTGC+TGG | 0.538191 | 1.3:-73448001 | None:intergenic |
| TCCATAATCGTACTTGGAGA+AGG | 0.540057 | 1.3:-73447850 | None:intergenic |
| AATACACCAGAACAATCATT+GGG | 0.543527 | 1.3:+73443899 | MS.gene029607:CDS |
| TTTCAGATTGAAACAAAGGA+TGG | 0.556157 | 1.3:+73442981 | None:intergenic |
| ACTTAGACGAGTATCACATA+AGG | 0.561077 | 1.3:-73445679 | None:intergenic |
| ATCATTGGGCTTCATCCTTG+CGG | 0.568286 | 1.3:+73443913 | MS.gene029607:CDS |
| TAGTAACCATGAATAGGCCA+TGG | 0.571896 | 1.3:-73443109 | None:intergenic |
| TAAACCACCTCAGGTGTGGA+TGG | 0.574032 | 1.3:-73448023 | None:intergenic |
| CGTGGAACACGTTGGAGCCA+TGG | 0.574865 | 1.3:+73443968 | MS.gene029607:CDS |
| CATTTCCGCAAGATCGTACA+GGG | 0.575973 | 1.3:-73445107 | None:intergenic |
| ACTTGGAGAAGGTACCTTTG+CGG | 0.586271 | 1.3:-73447839 | None:intergenic |
| AAGATAAACCACCTCAGGTG+TGG | 0.587694 | 1.3:-73448027 | None:intergenic |
| ATTAGCCCTGTACGATCTTG+CGG | 0.594612 | 1.3:+73445102 | MS.gene029607:CDS |
| TTGCTTCAACGAGTCACGCG+TGG | 0.604439 | 1.3:+73446702 | MS.gene029607:CDS |
| ACAATCAGGCAGGTGATGCA+TGG | 0.608662 | 1.3:+73443870 | MS.gene029607:intron |
| TGATTTCCAGCACACACTCA+AGG | 0.617911 | 1.3:+73447995 | MS.gene029607:CDS |
| GGAACATACTCTGGAAAAGG+TGG | 0.634034 | 1.3:-73446774 | None:intergenic |
| ACTGCCATCCACACCTGAGG+TGG | 0.635259 | 1.3:+73448019 | MS.gene029607:CDS |
| AAGGCAATGATCTGGGTATG+CGG | 0.641163 | 1.3:-73447929 | None:intergenic |
| CATCAAAACCTTGATCCGCA+AGG | 0.641366 | 1.3:-73443928 | None:intergenic |
| TGTTCTCCAGTGATCCGCAA+AGG | 0.657082 | 1.3:+73447825 | MS.gene029607:intron |
| CCTTTGTTGATGGCTTATGG+GGG | 0.663104 | 1.3:+73447948 | MS.gene029607:CDS |
| GGAACTGCCATCCACACCTG+AGG | 0.674091 | 1.3:+73448016 | MS.gene029607:CDS |
| CCATGGAGAAGCAGAACCGG+AGG | 0.690082 | 1.3:-73443092 | None:intergenic |
| TCAGTTTCTTCAAGTCAATG+GGG | 0.699933 | 1.3:+73448117 | MS.gene029607:CDS |
| GAAATGTGCGTGGAACACGT+TGG | 0.739556 | 1.3:+73443960 | MS.gene029607:CDS |
| GTTTGGGTAGGAAATGTGCG+TGG | 0.748523 | 1.3:+73443950 | MS.gene029607:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTGATGTAAAAAATAT+AGG | + | chr1.3:73446027-73446046 | MS.gene029607:intron | 10.0% |
| !!! | AGAAAAAAACAATTTTATTT+AGG | + | chr1.3:73446414-73446433 | MS.gene029607:intron | 10.0% |
| !!! | ATATTTTTTACATCAATAAT+GGG | - | chr1.3:73446027-73446046 | None:intergenic | 10.0% |
| !!! | TATATTTTTTACATCAATAA+TGG | - | chr1.3:73446028-73446047 | None:intergenic | 10.0% |
| !! | AATGAAAAGTTATTTATGTT+TGG | - | chr1.3:73443580-73443599 | None:intergenic | 15.0% |
| !! | AATGCTTGAAAATATTTATA+GGG | + | chr1.3:73444248-73444267 | MS.gene029607:intron | 15.0% |
| !! | ATAAATTAATATATGTGTAG+CGG | - | chr1.3:73446062-73446081 | None:intergenic | 15.0% |
| !! | ATGACATTAAATTAAATTAC+AGG | + | chr1.3:73446670-73446689 | MS.gene029607:intron | 15.0% |
| !! | TAATGCTTGAAAATATTTAT+AGG | + | chr1.3:73444247-73444266 | MS.gene029607:intron | 15.0% |
| !! | TCTATTTATAAATTGCTAAA+AGG | + | chr1.3:73447664-73447683 | MS.gene029607:intron | 15.0% |
| !!! | AATTAGTTTCAAACTTTAAA+AGG | - | chr1.3:73443804-73443823 | None:intergenic | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+CGG | + | chr1.3:73443258-73443277 | MS.gene029607:intron | 15.0% |
| !!! | TCTTTTCAATTGTAAAATAT+GGG | + | chr1.3:73444095-73444114 | MS.gene029607:intron | 15.0% |
| !!! | TTCTTTTCAATTGTAAAATA+TGG | + | chr1.3:73444094-73444113 | MS.gene029607:intron | 15.0% |
| !! | ATTTAAAAGATATGCATTGT+CGG | - | chr1.3:73447309-73447328 | None:intergenic | 20.0% |
| !! | CATAGTGTATTAGTATAATA+AGG | + | chr1.3:73443304-73443323 | MS.gene029607:intron | 20.0% |
| !! | GATAGTAGAAGAATAAATAA+AGG | - | chr1.3:73446189-73446208 | None:intergenic | 20.0% |
| !! | TTAAAAATTCACTTTGTATG+CGG | + | chr1.3:73443704-73443723 | MS.gene029607:intron | 20.0% |
| !!! | AAATTCATTTTGCAATTTTG+TGG | - | chr1.3:73444171-73444190 | None:intergenic | 20.0% |
| !!! | AATATTTGTACAACCATTTT+GGG | + | chr1.3:73444275-73444294 | MS.gene029607:intron | 20.0% |
| !!! | ACAAGTTCTAAATGTATTAA+GGG | + | chr1.3:73444481-73444500 | MS.gene029607:intron | 20.0% |
| !!! | ACTATATTCTGTCATTTTTT+AGG | + | chr1.3:73443735-73443754 | MS.gene029607:intron | 20.0% |
| !!! | ATTATGAGAAGAGTATTATT+TGG | - | chr1.3:73445857-73445876 | None:intergenic | 20.0% |
| !!! | CTATATTCTGTCATTTTTTA+GGG | + | chr1.3:73443736-73443755 | MS.gene029607:intron | 20.0% |
| !!! | CTCATTTTAATCAATAACTT+AGG | + | chr1.3:73446565-73446584 | MS.gene029607:intron | 20.0% |
| !!! | TAATATTTGTACAACCATTT+TGG | + | chr1.3:73444274-73444293 | MS.gene029607:intron | 20.0% |
| !!! | TACAAGTTCTAAATGTATTA+AGG | + | chr1.3:73444480-73444499 | MS.gene029607:intron | 20.0% |
| !!! | TATATTCTGTCATTTTTTAG+GGG | + | chr1.3:73443737-73443756 | MS.gene029607:intron | 20.0% |
| !!! | TATATTTTTGAGTTTTGACA+CGG | + | chr1.3:73444567-73444586 | MS.gene029607:intron | 20.0% |
| !!! | TCAATTTAGAATCATTTATG+AGG | - | chr1.3:73443479-73443498 | None:intergenic | 20.0% |
| !!! | TGAGAAATTTTGATCAATTA+GGG | - | chr1.3:73446255-73446274 | None:intergenic | 20.0% |
| !!! | TTGAGAAATTTTGATCAATT+AGG | - | chr1.3:73446256-73446275 | None:intergenic | 20.0% |
| !!! | TTTTATTTTGGTAAAAACGA+GGG | - | chr1.3:73445017-73445036 | None:intergenic | 20.0% |
| !!! | TTTTTAGCTGTATATTGATA+AGG | + | chr1.3:73444869-73444888 | MS.gene029607:intron | 20.0% |
| ! | AAATGATTCTAAATTGAGCT+TGG | + | chr1.3:73443482-73443501 | MS.gene029607:intron | 25.0% |
| ! | AACTCAAAGTTATTTGTAGT+TGG | + | chr1.3:73445154-73445173 | MS.gene029607:CDS | 25.0% |
| ! | AAGAAACCAATTAAAGATGA+TGG | - | chr1.3:73446805-73446824 | None:intergenic | 25.0% |
| ! | AAGATGCAGTTATTAAAATG+GGG | + | chr1.3:73447232-73447251 | MS.gene029607:intron | 25.0% |
| ! | ACATTATCAAACATGATCAA+AGG | - | chr1.3:73446968-73446987 | None:intergenic | 25.0% |
| ! | ACGATATAGAATAAACAAAC+TGG | - | chr1.3:73447128-73447147 | None:intergenic | 25.0% |
| ! | ACTCAAAGTTATTTGTAGTT+GGG | + | chr1.3:73445155-73445174 | MS.gene029607:CDS | 25.0% |
| ! | ATATGATCCAAGTATGAAAT+TGG | - | chr1.3:73445352-73445371 | None:intergenic | 25.0% |
| ! | ATATGTAACTCTTGTATCTA+CGG | + | chr1.3:73446279-73446298 | MS.gene029607:intron | 25.0% |
| ! | ATCAACATATGCAAAAGAAA+AGG | - | chr1.3:73445577-73445596 | None:intergenic | 25.0% |
| ! | ATCCTTACAAATATGTCTTT+AGG | + | chr1.3:73447327-73447346 | MS.gene029607:intron | 25.0% |
| ! | ATCTTTATCAGAGAAGAATA+AGG | + | chr1.3:73443997-73444016 | MS.gene029607:CDS | 25.0% |
| ! | ATGTTATAGAACTCATTGAA+TGG | + | chr1.3:73444042-73444061 | MS.gene029607:intron | 25.0% |
| ! | CAAATAAGAAATGCTTCATT+CGG | + | chr1.3:73444799-73444818 | MS.gene029607:intron | 25.0% |
| ! | CAAGATGCAGTTATTAAAAT+GGG | + | chr1.3:73447231-73447250 | MS.gene029607:intron | 25.0% |
| ! | CAGTGTAAAACTAATTACTA+AGG | - | chr1.3:73447165-73447184 | None:intergenic | 25.0% |
| ! | GGGTTTAACAATAAATTCAA+TGG | - | chr1.3:73443540-73443559 | None:intergenic | 25.0% |
| ! | TAAATAAAGGTCAGATACTA+TGG | - | chr1.3:73446176-73446195 | None:intergenic | 25.0% |
| ! | TCAAGATGCAGTTATTAAAA+TGG | + | chr1.3:73447230-73447249 | MS.gene029607:intron | 25.0% |
| ! | TGGATATATTCATGTAAACA+GGG | - | chr1.3:73443560-73443579 | None:intergenic | 25.0% |
| ! | TGTAAAACTAATTACTAAGG+TGG | - | chr1.3:73447162-73447181 | None:intergenic | 25.0% |
| ! | TTATGGAAAGCTTAAAAATC+TGG | + | chr1.3:73447866-73447885 | MS.gene029607:CDS | 25.0% |
| ! | TTGGATATATTCATGTAAAC+AGG | - | chr1.3:73443561-73443580 | None:intergenic | 25.0% |
| ! | TTTCCTATAATGTCATTACT+AGG | + | chr1.3:73447371-73447390 | MS.gene029607:intron | 25.0% |
| !! | AAACATTTTTCTATCTCTCT+TGG | - | chr1.3:73446314-73446333 | None:intergenic | 25.0% |
| !! | GTTATTGATTAAAATGAGAG+AGG | - | chr1.3:73446563-73446582 | None:intergenic | 25.0% |
| !!! | AACAATTTTATTTAGGACAC+CGG | + | chr1.3:73446421-73446440 | MS.gene029607:intron | 25.0% |
| !!! | AACCTTTTTTTCTCTTCTTT+TGG | - | chr1.3:73444406-73444425 | None:intergenic | 25.0% |
| !!! | ACCTTTTTTTCTCTTCTTTT+GGG | - | chr1.3:73444405-73444424 | None:intergenic | 25.0% |
| !!! | AGAAATTTTGATCAATTAGG+GGG | - | chr1.3:73446253-73446272 | None:intergenic | 25.0% |
| !!! | ATATCTTGCTATTTCAATGT+GGG | + | chr1.3:73443332-73443351 | MS.gene029607:intron | 25.0% |
| !!! | CATACTCATCAGTTTTATTT+TGG | - | chr1.3:73445029-73445048 | None:intergenic | 25.0% |
| !!! | GAGAAATTTTGATCAATTAG+GGG | - | chr1.3:73446254-73446273 | None:intergenic | 25.0% |
| !!! | GTTTTATTTTGGTAAAAACG+AGG | - | chr1.3:73445018-73445037 | None:intergenic | 25.0% |
| !!! | TGTTTCTAAAATGTAAGCTA+TGG | - | chr1.3:73445239-73445258 | None:intergenic | 25.0% |
| !!! | TTTATTTTGGTAAAAACGAG+GGG | - | chr1.3:73445016-73445035 | None:intergenic | 25.0% |
| !!! | TTTTACTGTGTTATTTGCTT+TGG | + | chr1.3:73447710-73447729 | MS.gene029607:intron | 25.0% |
| AAAACAATAGAGAGAGAAAG+AGG | - | chr1.3:73444379-73444398 | None:intergenic | 30.0% | |
| AAACAATAGAGAGAGAAAGA+GGG | - | chr1.3:73444378-73444397 | None:intergenic | 30.0% | |
| AAACATCTTATCCATCTTAG+GGG | + | chr1.3:73445254-73445273 | MS.gene029607:intron | 30.0% | |
| AAATACACCAGAACAATCAT+TGG | + | chr1.3:73443898-73443917 | MS.gene029607:CDS | 30.0% | |
| AAGAGAAAAAGAAACTACAG+CGG | - | chr1.3:73447430-73447449 | None:intergenic | 30.0% | |
| AATACACCAGAACAATCATT+GGG | + | chr1.3:73443899-73443918 | MS.gene029607:CDS | 30.0% | |
| ACATAAGGAAATCAAGAGAT+TGG | - | chr1.3:73445667-73445686 | None:intergenic | 30.0% | |
| ACCTCATTTCTATTAGCAAA+TGG | - | chr1.3:73444516-73444535 | None:intergenic | 30.0% | |
| ACTTATGATGATCTCGAAAA+GGG | + | chr1.3:73444763-73444782 | MS.gene029607:intron | 30.0% | |
| ACTTGAAGAAACTGATGATA+GGG | - | chr1.3:73448112-73448131 | None:intergenic | 30.0% | |
| AGAAACATCTTATCCATCTT+AGG | + | chr1.3:73445252-73445271 | MS.gene029607:intron | 30.0% | |
| AGTAAGTAGTAACCATGAAT+AGG | - | chr1.3:73443118-73443137 | None:intergenic | 30.0% | |
| AGTACTTCTTATAAGATCAG+AGG | - | chr1.3:73444746-73444765 | None:intergenic | 30.0% | |
| ATAGAGTTTAAAAGACAGTC+TGG | - | chr1.3:73447649-73447668 | None:intergenic | 30.0% | |
| ATCAGTTTCTTCAAGTCAAT+GGG | + | chr1.3:73448116-73448135 | MS.gene029607:CDS | 30.0% | |
| ATCATACACAAAATGAAAGC+TGG | - | chr1.3:73447740-73447759 | None:intergenic | 30.0% | |
| ATGTGAAAAGGATGATTTAC+AGG | - | chr1.3:73445202-73445221 | None:intergenic | 30.0% | |
| ATTATTTGATCTTGAGCAGT+TGG | + | chr1.3:73444834-73444853 | MS.gene029607:intron | 30.0% | |
| CAAAACTCTGCAAATATTAC+TGG | - | chr1.3:73443665-73443684 | None:intergenic | 30.0% | |
| CAAAAGAAAAGGAGAAAAAC+AGG | - | chr1.3:73445566-73445585 | None:intergenic | 30.0% | |
| CAAAGAAGTAATGCTTCATT+CGG | + | chr1.3:73444704-73444723 | MS.gene029607:intron | 30.0% | |
| CAATGAGTTCTATAACATGA+AGG | - | chr1.3:73444040-73444059 | None:intergenic | 30.0% | |
| CATCATCAACCAGTAATTAA+TGG | - | chr1.3:73447563-73447582 | None:intergenic | 30.0% | |
| CATGTTCCATCATCTTTAAT+TGG | + | chr1.3:73446796-73446815 | MS.gene029607:intron | 30.0% | |
| CTCCTAAAGACATATTTGTA+AGG | - | chr1.3:73447332-73447351 | None:intergenic | 30.0% | |
| CTGATAAAGATTTATGTCCA+TGG | - | chr1.3:73443988-73444007 | None:intergenic | 30.0% | |
| CTTAAAAATCTGGTAGAGTA+TGG | + | chr1.3:73447876-73447895 | MS.gene029607:CDS | 30.0% | |
| GAAACATCTTATCCATCTTA+GGG | + | chr1.3:73445253-73445272 | MS.gene029607:intron | 30.0% | |
| GAATAAACAAACTGGTACTA+AGG | - | chr1.3:73447120-73447139 | None:intergenic | 30.0% | |
| GATCAAAGGTAAATTTGTGA+TGG | - | chr1.3:73446954-73446973 | None:intergenic | 30.0% | |
| GTACCTAGTAATGACATTAT+AGG | - | chr1.3:73447377-73447396 | None:intergenic | 30.0% | |
| GTGGTTTATCTTGAAAACTA+TGG | + | chr1.3:73448038-73448057 | MS.gene029607:CDS | 30.0% | |
| TAACTGCATCTTGAAATTGA+CGG | - | chr1.3:73447224-73447243 | None:intergenic | 30.0% | |
| TACTTATGATGATCTCGAAA+AGG | + | chr1.3:73444762-73444781 | MS.gene029607:intron | 30.0% | |
| TAGAACCAAACATACACTAA+AGG | - | chr1.3:73443384-73443403 | None:intergenic | 30.0% | |
| TAGCAATTGCCATTAATTAC+TGG | + | chr1.3:73447551-73447570 | MS.gene029607:intron | 30.0% | |
| TATGTATGTCTGTGTTTAGA+AGG | + | chr1.3:73445755-73445774 | MS.gene029607:intron | 30.0% | |
| TCAACAACTAAACTTTCATG+TGG | + | chr1.3:73444224-73444243 | MS.gene029607:intron | 30.0% | |
| TCCCAAAAGAAGAGAAAAAA+AGG | + | chr1.3:73444401-73444420 | MS.gene029607:intron | 30.0% | |
| TTCATCAGCTGAATTTCAAA+AGG | + | chr1.3:73445522-73445541 | MS.gene029607:CDS | 30.0% | |
| TTGATTAAAATGAGAGAGGA+AGG | - | chr1.3:73446559-73446578 | None:intergenic | 30.0% | |
| ! | AAGGTTTTTGAATCATGCTT+AGG | - | chr1.3:73446540-73446559 | None:intergenic | 30.0% |
| ! | ACTTTTCTATACATAGCCAA+GGG | + | chr1.3:73444141-73444160 | MS.gene029607:intron | 30.0% |
| ! | AGCTTTCATTTTGTGTATGA+TGG | + | chr1.3:73447739-73447758 | MS.gene029607:intron | 30.0% |
| ! | CAATAACTTAGGAATCCTTT+TGG | + | chr1.3:73446576-73446595 | MS.gene029607:intron | 30.0% |
| ! | CAGTAATATTTGCAGAGTTT+TGG | + | chr1.3:73443663-73443682 | MS.gene029607:intron | 30.0% |
| ! | CTAAAAGGACATTTGAAGTT+TGG | + | chr1.3:73447679-73447698 | MS.gene029607:intron | 30.0% |
| ! | GCTTTAAATTGGACTTTGTA+GGG | + | chr1.3:73447013-73447032 | MS.gene029607:intron | 30.0% |
| ! | TACAAATATGTCTTTAGGAG+AGG | + | chr1.3:73447332-73447351 | MS.gene029607:intron | 30.0% |
| ! | TACTTTTCTATACATAGCCA+AGG | + | chr1.3:73444140-73444159 | MS.gene029607:intron | 30.0% |
| ! | TCAACCTTTTCTACTATATC+CGG | - | chr1.3:73445310-73445329 | None:intergenic | 30.0% |
| ! | TTAACTCATTTTCAGCGATT+GGG | + | chr1.3:73445638-73445657 | MS.gene029607:intron | 30.0% |
| ! | TTATGCCATTTGATACAATC+AGG | + | chr1.3:73443856-73443875 | MS.gene029607:intron | 30.0% |
| ! | TTTTCCATTCTTAGTACCAA+AGG | - | chr1.3:73445382-73445401 | None:intergenic | 30.0% |
| !! | AACTTGTTGAAAACATTCAG+AGG | - | chr1.3:73444595-73444614 | None:intergenic | 30.0% |
| !! | AGCTATTTTGTGACAACTTT+TGG | - | chr1.3:73444432-73444451 | None:intergenic | 30.0% |
| !! | AGCTTTAAATTGGACTTTGT+AGG | + | chr1.3:73447012-73447031 | MS.gene029607:intron | 30.0% |
| !! | CAATTAAAGATGATGGAACA+TGG | - | chr1.3:73446798-73446817 | None:intergenic | 30.0% |
| !! | CTTGCTATTATTCTTGTCAA+TGG | + | chr1.3:73447780-73447799 | MS.gene029607:intron | 30.0% |
| !! | GAATTTGTTATTGACCTGTT+TGG | + | chr1.3:73443439-73443458 | MS.gene029607:intron | 30.0% |
| !! | GAGAAGAGTATTATTTGGAT+TGG | - | chr1.3:73445852-73445871 | None:intergenic | 30.0% |
| !! | GATATCTTGCTATTTCAATG+TGG | + | chr1.3:73443331-73443350 | MS.gene029607:intron | 30.0% |
| !! | GATATGAAGCAGCTTTAAAT+TGG | + | chr1.3:73447002-73447021 | MS.gene029607:intron | 30.0% |
| !! | GCTATTTTGTGACAACTTTT+GGG | - | chr1.3:73444431-73444450 | None:intergenic | 30.0% |
| !! | TTGATGATGAATCAGCATAT+GGG | + | chr1.3:73447574-73447593 | MS.gene029607:intron | 30.0% |
| !! | TTTTCAGCACTAGTTTGAAA+AGG | + | chr1.3:73444667-73444686 | MS.gene029607:intron | 30.0% |
| !!! | TGTATGTTTGGTTCTACTTT+TGG | + | chr1.3:73443388-73443407 | MS.gene029607:intron | 30.0% |
| AAACAGGACAGAATGAAAAC+TGG | - | chr1.3:73445550-73445569 | None:intergenic | 35.0% | |
| AACAATAGAGAGAGAAAGAG+GGG | - | chr1.3:73444377-73444396 | None:intergenic | 35.0% | |
| AAGCTTTCCATAATCGTACT+TGG | - | chr1.3:73447859-73447878 | None:intergenic | 35.0% | |
| AATGCTGGTAGAATGTGAAA+AGG | - | chr1.3:73445214-73445233 | None:intergenic | 35.0% | |
| ACAAAGGATGGTTTCTTGTT+AGG | + | chr1.3:73442993-73443012 | MS.gene029607:CDS | 35.0% | |
| ACAGTCTGGTGGAAATAATT+AGG | - | chr1.3:73447635-73447654 | None:intergenic | 35.0% | |
| ACTTAGACGAGTATCACATA+AGG | - | chr1.3:73445682-73445701 | None:intergenic | 35.0% | |
| AGCTTCCTTTAGTGTATGTT+TGG | + | chr1.3:73443376-73443395 | MS.gene029607:intron | 35.0% | |
| ATCAACAAAGGCAATGATCT+GGG | - | chr1.3:73447939-73447958 | None:intergenic | 35.0% | |
| ATGTAAGCTATGGAAAATGC+TGG | - | chr1.3:73445229-73445248 | None:intergenic | 35.0% | |
| ATTGACCTGTTTGGATGTAT+TGG | + | chr1.3:73443448-73443467 | MS.gene029607:intron | 35.0% | |
| CAAAACCAATACATCCAAAC+AGG | - | chr1.3:73443456-73443475 | None:intergenic | 35.0% | |
| CATCAGTTTCTTCAAGTCAA+TGG | + | chr1.3:73448115-73448134 | MS.gene029607:CDS | 35.0% | |
| GAAAAATAGAGACCTCTCAT+TGG | - | chr1.3:73447192-73447211 | None:intergenic | 35.0% | |
| GAAATAATTGTCCCCTAAGA+TGG | - | chr1.3:73445268-73445287 | None:intergenic | 35.0% | |
| GACTTGAAGAAACTGATGAT+AGG | - | chr1.3:73448113-73448132 | None:intergenic | 35.0% | |
| GGGAAGTAATAATGTTCAGT+GGG | + | chr1.3:73447047-73447066 | MS.gene029607:intron | 35.0% | |
| GTTCAGATGATTGCTACAAT+GGG | + | chr1.3:73445497-73445516 | MS.gene029607:intron | 35.0% | |
| TAAATTGGACTTTGTAGGGA+CGG | + | chr1.3:73447017-73447036 | MS.gene029607:intron | 35.0% | |
| TAATATATGTGTAGCGGTGA+TGG | - | chr1.3:73446056-73446075 | None:intergenic | 35.0% | |
| TCAACCGGATATAGTAGAAA+AGG | + | chr1.3:73445303-73445322 | MS.gene029607:CDS | 35.0% | |
| TCAGTTTCTTCAAGTCAATG+GGG | + | chr1.3:73448117-73448136 | MS.gene029607:CDS | 35.0% | |
| TCTCAAAAGTTGTCCCAAAA+TGG | - | chr1.3:73444291-73444310 | None:intergenic | 35.0% | |
| TCTGTCTCCAATTTCATACT+TGG | + | chr1.3:73445342-73445361 | MS.gene029607:CDS | 35.0% | |
| TGACTAGAATTCTTCGACAA+TGG | - | chr1.3:73444924-73444943 | None:intergenic | 35.0% | |
| TGGCATTCATGAAAGACAAA+AGG | - | chr1.3:73445881-73445900 | None:intergenic | 35.0% | |
| TGTTCAGATGATTGCTACAA+TGG | + | chr1.3:73445496-73445515 | MS.gene029607:intron | 35.0% | |
| TTGAAATTGACGGAATGACA+TGG | - | chr1.3:73447214-73447233 | None:intergenic | 35.0% | |
| TTTGCTAAGCTGGAAATACA+TGG | - | chr1.3:73445600-73445619 | None:intergenic | 35.0% | |
| ! | AAATATGTCTTTAGGAGAGG+AGG | + | chr1.3:73447335-73447354 | MS.gene029607:intron | 35.0% |
| ! | CTTAACTCATTTTCAGCGAT+TGG | + | chr1.3:73445637-73445656 | MS.gene029607:intron | 35.0% |
| ! | GCCATTTGCTAATAGAAATG+AGG | + | chr1.3:73444512-73444531 | MS.gene029607:intron | 35.0% |
| ! | GCTGTAGTTTCTTTTTCTCT+TGG | + | chr1.3:73447429-73447448 | MS.gene029607:intron | 35.0% |
| ! | TACATAATTGATTCTCGAGG+TGG | + | chr1.3:73443415-73443434 | MS.gene029607:intron | 35.0% |
| ! | TCCAGCTTAGCAAATTTTCA+CGG | + | chr1.3:73445606-73445625 | MS.gene029607:intron | 35.0% |
| ! | TGACTTTTCTGACTATTCAC+TGG | + | chr1.3:73446843-73446862 | MS.gene029607:intron | 35.0% |
| ! | TGTCCTTTTGTAGCACTTTT+GGG | + | chr1.3:73445063-73445082 | MS.gene029607:intron | 35.0% |
| ! | TTGTCCTTTTGTAGCACTTT+TGG | + | chr1.3:73445062-73445081 | MS.gene029607:intron | 35.0% |
| !! | AATCCCAAAAGTGCTACAAA+AGG | - | chr1.3:73445069-73445088 | None:intergenic | 35.0% |
| !! | GAAAAGGTGGTTCAAGTTTT+TGG | - | chr1.3:73446764-73446783 | None:intergenic | 35.0% |
| !! | GGATCAAGGTTTTGATGTTT+GGG | + | chr1.3:73443934-73443953 | MS.gene029607:CDS | 35.0% |
| !! | GTTGATGATGAATCAGCATA+TGG | + | chr1.3:73447573-73447592 | MS.gene029607:intron | 35.0% |
| !! | GTTTTGGACAGTGTTTGAAT+TGG | + | chr1.3:73443679-73443698 | MS.gene029607:intron | 35.0% |
| !! | TTCAAGTTTTTGGAGGATGA+TGG | - | chr1.3:73446754-73446773 | None:intergenic | 35.0% |
| !! | TTTTCAAGATAAACCACCTC+AGG | - | chr1.3:73448035-73448054 | None:intergenic | 35.0% |
| !!! | ATGTTTGGTTCTACTTTTGG+AGG | + | chr1.3:73443391-73443410 | MS.gene029607:intron | 35.0% |
| !!! | TGTTTGGTTCTACTTTTGGA+GGG | + | chr1.3:73443392-73443411 | MS.gene029607:intron | 35.0% |
| !!! | TTTTGTAGCACTTTTGGGAT+TGG | + | chr1.3:73445068-73445087 | MS.gene029607:intron | 35.0% |
| AAATTGGACTTTGTAGGGAC+GGG | + | chr1.3:73447018-73447037 | MS.gene029607:intron | 40.0% | |
| ACCTGCCTGATTGTATCAAA+TGG | - | chr1.3:73443864-73443883 | None:intergenic | 40.0% | |
| ACCTTCTCCAAGTACGATTA+TGG | + | chr1.3:73447849-73447868 | MS.gene029607:CDS | 40.0% | |
| AGCCAGCAAAGTAATTGCAA+TGG | - | chr1.3:73445901-73445920 | None:intergenic | 40.0% | |
| ATACACGCAGAATGACCAAA+AGG | - | chr1.3:73446594-73446613 | None:intergenic | 40.0% | |
| ATGAAGCACATACACACACA+TGG | - | chr1.3:73443287-73443306 | None:intergenic | 40.0% | |
| ATGAAGCCCAATGATTGTTC+TGG | - | chr1.3:73443908-73443927 | None:intergenic | 40.0% | |
| ATGATGAATCAGCATATGGG+TGG | + | chr1.3:73447577-73447596 | MS.gene029607:intron | 40.0% | |
| ATGGAACATGGAACATACTC+TGG | - | chr1.3:73446786-73446805 | None:intergenic | 40.0% | |
| ATGGCTCGTATGAGTGTTAT+AGG | + | chr1.3:73446359-73446378 | MS.gene029607:intron | 40.0% | |
| ATTTGTAGTTGGGCATTCAC+AGG | + | chr1.3:73445165-73445184 | MS.gene029607:CDS | 40.0% | |
| CAGATCATTGCCTTTGTTGA+TGG | + | chr1.3:73447938-73447957 | MS.gene029607:CDS | 40.0% | |
| CATCAACAAAGGCAATGATC+TGG | - | chr1.3:73447940-73447959 | None:intergenic | 40.0% | |
| CGTATGAGTGTTATAGGTGT+CGG | + | chr1.3:73446365-73446384 | MS.gene029607:intron | 40.0% | |
| CTTAGGCAAGTTATGAAGCA+CGG | - | chr1.3:73446523-73446542 | None:intergenic | 40.0% | |
| CTTCGTACAAATATGCTCCT+TGG | - | chr1.3:73447518-73447537 | None:intergenic | 40.0% | |
| GAGTTTAAAAGACAGTCTGG+TGG | - | chr1.3:73447646-73447665 | None:intergenic | 40.0% | |
| GCTCAAAAACAACAACAACG+AGG | + | chr1.3:73443068-73443087 | MS.gene029607:CDS | 40.0% | |
| GGAAAAGATGCACATTGATC+AGG | + | chr1.3:73445396-73445415 | MS.gene029607:CDS | 40.0% | |
| GGATCATATTAGTGCACCTT+TGG | + | chr1.3:73445363-73445382 | MS.gene029607:CDS | 40.0% | |
| GGGGAAGTAATAATGTTCAG+TGG | + | chr1.3:73447046-73447065 | MS.gene029607:intron | 40.0% | |
| TACTATATCCGGTTGAGTGA+AGG | - | chr1.3:73445299-73445318 | None:intergenic | 40.0% | |
| TAGTAACCATGAATAGGCCA+TGG | - | chr1.3:73443112-73443131 | None:intergenic | 40.0% | |
| TCCATAATCGTACTTGGAGA+AGG | - | chr1.3:73447853-73447872 | None:intergenic | 40.0% | |
| TGACATGCTTTATCTTGCCA+AGG | + | chr1.3:73447498-73447517 | MS.gene029607:intron | 40.0% | |
| TGAGAGACATGAACCTGTAA+TGG | - | chr1.3:73445724-73445743 | None:intergenic | 40.0% | |
| TGCACCTTTGGTACTAAGAA+TGG | + | chr1.3:73445375-73445394 | MS.gene029607:CDS | 40.0% | |
| TGCCATTGCAATTACTTTGC+TGG | + | chr1.3:73445896-73445915 | MS.gene029607:intron | 40.0% | |
| TTACACTGACATCCAATGAG+AGG | + | chr1.3:73447177-73447196 | MS.gene029607:intron | 40.0% | |
| TTTGTCTGAGTTGTCTGACA+TGG | + | chr1.3:73446340-73446359 | MS.gene029607:intron | 40.0% | |
| ! | ACGTCTTCTATCAGAAGTGT+CGG | - | chr1.3:73443195-73443214 | None:intergenic | 40.0% |
| ! | ATACGATGTGACTTGTGCTT+TGG | + | chr1.3:73444990-73445009 | MS.gene029607:intron | 40.0% |
| ! | ATGCGGCTAAGGTCAAATTT+TGG | - | chr1.3:73447915-73447934 | None:intergenic | 40.0% |
| ! | CAGCTTAGCAAATTTTCACG+GGG | + | chr1.3:73445608-73445627 | MS.gene029607:intron | 40.0% |
| ! | CATGGAACATACTCTGGAAA+AGG | - | chr1.3:73446780-73446799 | None:intergenic | 40.0% |
| ! | CCAGCTTAGCAAATTTTCAC+GGG | + | chr1.3:73445607-73445626 | MS.gene029607:intron | 40.0% |
| ! | GGGTACATAATTGATTCTCG+AGG | + | chr1.3:73443412-73443431 | MS.gene029607:intron | 40.0% |
| !! | AAGGTGGTTCAAGTTTTTGG+AGG | - | chr1.3:73446761-73446780 | None:intergenic | 40.0% |
| !! | CAAGGTTTTGATGTTTGGGT+AGG | + | chr1.3:73443938-73443957 | MS.gene029607:CDS | 40.0% |
| !! | CGGATCAAGGTTTTGATGTT+TGG | + | chr1.3:73443933-73443952 | MS.gene029607:CDS | 40.0% |
| !! | TGCCTTTGTTGATGGCTTAT+GGG | + | chr1.3:73447946-73447965 | MS.gene029607:CDS | 40.0% |
| !! | TTGCCTTTGTTGATGGCTTA+TGG | + | chr1.3:73447945-73447964 | MS.gene029607:CDS | 40.0% |
| !!! | CTGTCATTTTTTAGGGGAAG+TGG | + | chr1.3:73443743-73443762 | MS.gene029607:intron | 40.0% |
| !!! | TTTTTGGAGGATGATGGATG+AGG | - | chr1.3:73446748-73446767 | None:intergenic | 40.0% |
| AAGATAAACCACCTCAGGTG+TGG | - | chr1.3:73448030-73448049 | None:intergenic | 45.0% | |
| AAGGCAATGATCTGGGTATG+CGG | - | chr1.3:73447932-73447951 | None:intergenic | 45.0% | |
| AATCAGCATATGGGTGGAAG+TGG | + | chr1.3:73447583-73447602 | MS.gene029607:intron | 45.0% | |
| AATTGGACTTTGTAGGGACG+GGG | + | chr1.3:73447019-73447038 | MS.gene029607:intron | 45.0% | |
| ATCATTGGGCTTCATCCTTG+CGG | + | chr1.3:73443913-73443932 | MS.gene029607:CDS | 45.0% | |
| ATTAGCCCTGTACGATCTTG+CGG | + | chr1.3:73445102-73445121 | MS.gene029607:CDS | 45.0% | |
| CATCAAAACCTTGATCCGCA+AGG | - | chr1.3:73443931-73443950 | None:intergenic | 45.0% | |
| CATTTCCGCAAGATCGTACA+GGG | - | chr1.3:73445110-73445129 | None:intergenic | 45.0% | |
| CGCACAATTCAGATCAGAGA+GGG | - | chr1.3:73445998-73446017 | None:intergenic | 45.0% | |
| CTCGAAAAGGGAGAACAGAA+TGG | + | chr1.3:73444775-73444794 | MS.gene029607:intron | 45.0% | |
| CTTCTGATAGAAGACGTGTC+TGG | + | chr1.3:73443198-73443217 | MS.gene029607:intron | 45.0% | |
| GACATGCTGTCATCCATTAC+AGG | + | chr1.3:73445708-73445727 | MS.gene029607:CDS | 45.0% | |
| GCCATTTGATACAATCAGGC+AGG | + | chr1.3:73443860-73443879 | MS.gene029607:intron | 45.0% | |
| GGATCACTGGAGAACATATG+AGG | - | chr1.3:73447821-73447840 | None:intergenic | 45.0% | |
| TCATTTCCGCAAGATCGTAC+AGG | - | chr1.3:73445111-73445130 | None:intergenic | 45.0% | |
| TGATTTCCAGCACACACTCA+AGG | + | chr1.3:73447995-73448014 | MS.gene029607:CDS | 45.0% | |
| TTACTTCGACACTCCTAGAC+CGG | - | chr1.3:73446394-73446413 | None:intergenic | 45.0% | |
| ! | CGGCTAAGGTCAAATTTTGG+TGG | - | chr1.3:73447912-73447931 | None:intergenic | 45.0% |
| ! | GCAATTTTGTGGAACACCCT+TGG | - | chr1.3:73444160-73444179 | None:intergenic | 45.0% |
| ! | GGAACATACTCTGGAAAAGG+TGG | - | chr1.3:73446777-73446796 | None:intergenic | 45.0% |
| ! | TTTTGCTGCCTTCACTCAAC+CGG | + | chr1.3:73445288-73445307 | MS.gene029607:CDS | 45.0% |
| !! | ACTTGGAGAAGGTACCTTTG+CGG | - | chr1.3:73447842-73447861 | None:intergenic | 45.0% |
| !! | CCCGTGAAAATTTGCTAAGC+TGG | - | chr1.3:73445610-73445629 | None:intergenic | 45.0% |
| !! | CCTTTGTTGATGGCTTATGG+GGG | + | chr1.3:73447948-73447967 | MS.gene029607:CDS | 45.0% |
| !! | GCCTTTGTTGATGGCTTATG+GGG | + | chr1.3:73447947-73447966 | MS.gene029607:CDS | 45.0% |
| !! | GCGCTGTTTTCAATTAGCAG+TGG | + | chr1.3:73446865-73446884 | MS.gene029607:intron | 45.0% |
| !! | GTGTTATAGGTGTCGGATAC+CGG | + | chr1.3:73446372-73446391 | MS.gene029607:intron | 45.0% |
| !! | TATATTAATTTATTTATAGA+CGG | + | chr1.3:73446069-73446088 | MS.gene029607:intron | 5.0% |
| ACAACAACAACGAGGTCCTC+CGG | + | chr1.3:73443076-73443095 | MS.gene029607:CDS | 50.0% | |
| ACAATCAGGCAGGTGATGCA+TGG | + | chr1.3:73443870-73443889 | MS.gene029607:intron | 50.0% | |
| ACGTGTCGGACAACTAAGAC+CGG | - | chr1.3:73446443-73446462 | None:intergenic | 50.0% | |
| ACGTGTCGTACGAGTGTCAT+GGG | + | chr1.3:73446459-73446478 | MS.gene029607:intron | 50.0% | |
| ATGATCTGGGTATGCGGCTA+AGG | - | chr1.3:73447926-73447945 | None:intergenic | 50.0% | |
| ATTGGACTTTGTAGGGACGG+GGG | + | chr1.3:73447020-73447039 | MS.gene029607:intron | 50.0% | |
| CCCCCATAAGCCATCAACAA+AGG | - | chr1.3:73447951-73447970 | None:intergenic | 50.0% | |
| GAAATGTGCGTGGAACACGT+TGG | + | chr1.3:73443960-73443979 | MS.gene029607:CDS | 50.0% | |
| GCGCACAATTCAGATCAGAG+AGG | - | chr1.3:73445999-73446018 | None:intergenic | 50.0% | |
| GCTTCTCCATGGCCTATTCA+TGG | + | chr1.3:73443103-73443122 | MS.gene029607:CDS | 50.0% | |
| GTTTGGGTAGGAAATGTGCG+TGG | + | chr1.3:73443950-73443969 | MS.gene029607:CDS | 50.0% | |
| TAAACCACCTCAGGTGTGGA+TGG | - | chr1.3:73448026-73448045 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACCTCT+AGG | - | chr1.3:73446512-73446531 | None:intergenic | 50.0% | |
| TCAGATCAGAGAGGGTGAGT+AGG | - | chr1.3:73445990-73446009 | None:intergenic | 50.0% | |
| TGTTCTCCAGTGATCCGCAA+AGG | + | chr1.3:73447825-73447844 | MS.gene029607:intron | 50.0% | |
| ! | AAGGTACCTTTGCGGATCAC+TGG | - | chr1.3:73447834-73447853 | None:intergenic | 50.0% |
| !!! | AGCACTTTTGGGATTGGAGC+TGG | + | chr1.3:73445074-73445093 | MS.gene029607:intron | 50.0% |
| ACTTTGTAGGGACGGGGGTT+GGG | + | chr1.3:73447025-73447044 | MS.gene029607:intron | 55.0% | |
| AGGCCATGGAGAAGCAGAAC+CGG | - | chr1.3:73443098-73443117 | None:intergenic | 55.0% | |
| CACGTGTCGTACGAGTGTCA+TGG | + | chr1.3:73446458-73446477 | MS.gene029607:intron | 55.0% | |
| GACACTCGTACGACACGTGT+CGG | - | chr1.3:73446457-73446476 | None:intergenic | 55.0% | |
| GCAGTTCCTTGAGTGTGTGC+TGG | - | chr1.3:73448004-73448023 | None:intergenic | 55.0% | |
| GGCTTCATCCTTGCGGATCA+AGG | + | chr1.3:73443920-73443939 | MS.gene029607:CDS | 55.0% | |
| TTGCTTCAACGAGTCACGCG+TGG | + | chr1.3:73446702-73446721 | MS.gene029607:CDS | 55.0% | |
| ! | TACGAGTGTCATGGGAGTGC+CGG | + | chr1.3:73446467-73446486 | MS.gene029607:intron | 55.0% |
| !! | CTCTAGGACTAGACGTGTCG+CGG | - | chr1.3:73446496-73446515 | None:intergenic | 55.0% |
| !! | TAGGTGTCGGATACCGGTCT+AGG | + | chr1.3:73446378-73446397 | MS.gene029607:intron | 55.0% |
| ACTAGACGTGTCGCGGTGTC+CGG | - | chr1.3:73446489-73446508 | None:intergenic | 60.0% | |
| ACTGCCATCCACACCTGAGG+TGG | + | chr1.3:73448019-73448038 | MS.gene029607:CDS | 60.0% | |
| CCATGGAGAAGCAGAACCGG+AGG | - | chr1.3:73443095-73443114 | None:intergenic | 60.0% | |
| CCTCCGGTTCTGCTTCTCCA+TGG | + | chr1.3:73443092-73443111 | MS.gene029607:CDS | 60.0% | |
| CGCGACACGTCTAGTCCTAG+AGG | + | chr1.3:73446494-73446513 | MS.gene029607:intron | 60.0% | |
| CGTGGAACACGTTGGAGCCA+TGG | + | chr1.3:73443968-73443987 | MS.gene029607:CDS | 60.0% | |
| CTTTGTAGGGACGGGGGTTG+GGG | + | chr1.3:73447026-73447045 | MS.gene029607:intron | 60.0% | |
| GACTTTGTAGGGACGGGGGT+TGG | + | chr1.3:73447024-73447043 | MS.gene029607:intron | 60.0% | |
| GGAACTGCCATCCACACCTG+AGG | + | chr1.3:73448016-73448035 | MS.gene029607:CDS | 60.0% | |
| TTTGTAGGGACGGGGGTTGG+GGG | + | chr1.3:73447027-73447046 | MS.gene029607:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 73442987 | 73448157 | 73442987 | ID=MS.gene029607 |
| chr1.3 | mRNA | 73442987 | 73448157 | 73442987 | ID=MS.gene029607.t1;Parent=MS.gene029607 |
| chr1.3 | exon | 73442987 | 73443124 | 73442987 | ID=MS.gene029607.t1.exon1;Parent=MS.gene029607.t1 |
| chr1.3 | CDS | 73442987 | 73443124 | 73442987 | ID=cds.MS.gene029607.t1;Parent=MS.gene029607.t1 |
| chr1.3 | exon | 73443878 | 73444018 | 73443878 | ID=MS.gene029607.t1.exon2;Parent=MS.gene029607.t1 |
| chr1.3 | CDS | 73443878 | 73444018 | 73443878 | ID=cds.MS.gene029607.t1;Parent=MS.gene029607.t1 |
| chr1.3 | exon | 73445076 | 73445186 | 73445076 | ID=MS.gene029607.t1.exon3;Parent=MS.gene029607.t1 |
| chr1.3 | CDS | 73445076 | 73445186 | 73445076 | ID=cds.MS.gene029607.t1;Parent=MS.gene029607.t1 |
| chr1.3 | exon | 73445274 | 73445417 | 73445274 | ID=MS.gene029607.t1.exon4;Parent=MS.gene029607.t1 |
| chr1.3 | CDS | 73445274 | 73445417 | 73445274 | ID=cds.MS.gene029607.t1;Parent=MS.gene029607.t1 |
| chr1.3 | exon | 73445503 | 73445543 | 73445503 | ID=MS.gene029607.t1.exon5;Parent=MS.gene029607.t1 |
| chr1.3 | CDS | 73445503 | 73445543 | 73445503 | ID=cds.MS.gene029607.t1;Parent=MS.gene029607.t1 |
| chr1.3 | exon | 73445653 | 73445729 | 73445653 | ID=MS.gene029607.t1.exon6;Parent=MS.gene029607.t1 |
| chr1.3 | CDS | 73445653 | 73445729 | 73445653 | ID=cds.MS.gene029607.t1;Parent=MS.gene029607.t1 |
| chr1.3 | exon | 73446692 | 73446787 | 73446692 | ID=MS.gene029607.t1.exon7;Parent=MS.gene029607.t1 |
| chr1.3 | CDS | 73446692 | 73446787 | 73446692 | ID=cds.MS.gene029607.t1;Parent=MS.gene029607.t1 |
| chr1.3 | exon | 73447835 | 73448157 | 73447835 | ID=MS.gene029607.t1.exon8;Parent=MS.gene029607.t1 |
| chr1.3 | CDS | 73447835 | 73448157 | 73447835 | ID=cds.MS.gene029607.t1;Parent=MS.gene029607.t1 |
| Gene Sequence |
| Protein sequence |
