Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71663.t1 | XP_013470044.1 | 93.9 | 407 | 23 | 1 | 1 | 407 | 1 | 405 | 2.90E-220 | 774.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71663.t1 | Q71DJ5 | 63.3 | 373 | 126 | 1 | 34 | 406 | 31 | 392 | 1.8e-141 | 503.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71663.t1 | A0A072VQK3 | 93.9 | 407 | 23 | 1 | 1 | 407 | 1 | 405 | 2.1e-220 | 774.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050301 | MS.gene71663 | 0.803754 | 3.00E-49 | -1.69E-46 |
| MS.gene050783 | MS.gene71663 | 0.805618 | 1.22E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene71663 | 0.801947 | 7.08E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene71663 | 0.800481 | 1.41E-48 | -1.69E-46 |
| MS.gene05602 | MS.gene71663 | 0.801202 | 1.01E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene060064 | MS.gene71663 | PPI |
| MS.gene060063 | MS.gene71663 | PPI |
| MS.gene040398 | MS.gene71663 | PPI |
| MS.gene040400 | MS.gene71663 | PPI |
| MS.gene62511 | MS.gene71663 | PPI |
| MS.gene040399 | MS.gene71663 | PPI |
| MS.gene79184 | MS.gene71663 | PPI |
| MS.gene060065 | MS.gene71663 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71663.t1 | MTR_1g107330 | 98.280 | 407 | 5 | 2 | 1 | 407 | 1 | 405 | 0.0 | 822 |
| MS.gene71663.t1 | MTR_1g107330 | 97.667 | 300 | 5 | 2 | 1 | 300 | 1 | 298 | 0.0 | 602 |
| MS.gene71663.t1 | MTR_5g084950 | 40.053 | 377 | 208 | 5 | 29 | 399 | 36 | 400 | 5.86e-105 | 316 |
| MS.gene71663.t1 | MTR_7g081050 | 40.691 | 376 | 199 | 6 | 35 | 400 | 43 | 404 | 1.21e-101 | 308 |
| MS.gene71663.t1 | MTR_3g081060 | 41.711 | 374 | 200 | 5 | 35 | 400 | 47 | 410 | 3.82e-101 | 306 |
| MS.gene71663.t1 | MTR_7g029365 | 39.314 | 379 | 217 | 4 | 29 | 401 | 41 | 412 | 9.98e-101 | 305 |
| MS.gene71663.t1 | MTR_3g081040 | 40.214 | 373 | 206 | 5 | 35 | 400 | 43 | 405 | 5.06e-100 | 303 |
| MS.gene71663.t1 | MTR_6g033965 | 42.204 | 372 | 197 | 5 | 35 | 400 | 44 | 403 | 9.13e-99 | 300 |
| MS.gene71663.t1 | MTR_7g081060 | 40.162 | 371 | 205 | 5 | 35 | 399 | 44 | 403 | 1.45e-95 | 292 |
| MS.gene71663.t1 | MTR_3g080980 | 39.516 | 372 | 209 | 6 | 35 | 400 | 43 | 404 | 7.79e-91 | 280 |
| MS.gene71663.t1 | MTR_6g033975 | 41.176 | 374 | 197 | 8 | 35 | 400 | 44 | 402 | 2.97e-89 | 276 |
| MS.gene71663.t1 | MTR_6g023740 | 33.738 | 412 | 254 | 7 | 1 | 399 | 7 | 412 | 4.57e-86 | 268 |
| MS.gene71663.t1 | MTR_6g023715 | 32.990 | 388 | 229 | 7 | 19 | 399 | 30 | 393 | 8.71e-81 | 254 |
| MS.gene71663.t1 | MTR_6g023750 | 32.961 | 358 | 226 | 6 | 50 | 399 | 4 | 355 | 7.53e-73 | 232 |
| MS.gene71663.t1 | MTR_7g029365 | 41.026 | 273 | 153 | 2 | 29 | 300 | 41 | 306 | 3.72e-72 | 229 |
| MS.gene71663.t1 | MTR_0595s0010 | 39.459 | 185 | 105 | 3 | 35 | 218 | 46 | 224 | 3.34e-43 | 154 |
| MS.gene71663.t1 | MTR_5g006650 | 43.382 | 136 | 68 | 2 | 88 | 219 | 63 | 193 | 4.88e-33 | 124 |
| MS.gene71663.t1 | MTR_5g049630 | 65.385 | 52 | 11 | 1 | 269 | 320 | 34 | 78 | 3.59e-15 | 71.2 |
| MS.gene71663.t1 | MTR_5g049820 | 90.625 | 32 | 3 | 0 | 269 | 300 | 903 | 934 | 1.32e-12 | 70.1 |
| MS.gene71663.t1 | MTR_7g451290 | 85.294 | 34 | 2 | 1 | 270 | 300 | 65 | 98 | 2.24e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71663.t1 | AT2G15230 | 63.271 | 373 | 126 | 1 | 34 | 406 | 31 | 392 | 0.0 | 511 |
| MS.gene71663.t1 | AT5G14180 | 36.816 | 402 | 234 | 7 | 6 | 399 | 26 | 415 | 4.46e-95 | 291 |
| MS.gene71663.t1 | AT5G14180 | 40.065 | 307 | 178 | 3 | 99 | 399 | 9 | 315 | 2.94e-82 | 255 |
| MS.gene71663.t1 | AT5G14180 | 40.000 | 305 | 177 | 3 | 101 | 399 | 2 | 306 | 3.93e-82 | 254 |
| MS.gene71663.t1 | AT5G14180 | 36.913 | 298 | 173 | 5 | 6 | 300 | 26 | 311 | 8.04e-68 | 218 |
| MS.gene71663.t1 | AT5G14180 | 35.448 | 268 | 158 | 5 | 6 | 270 | 26 | 281 | 1.35e-54 | 183 |
Find 90 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAGAGTTGGTTGTTGTTT+GGG | 0.186644 | 1.1:-76893107 | None:intergenic |
| TTGCCTTTGTTGATGGCTTA+TGG | 0.191042 | 1.1:+76898240 | MS.gene71663:CDS |
| CAGATCATTGCCTTTGTTGA+TGG | 0.268391 | 1.1:+76898233 | MS.gene71663:CDS |
| ACCTTCTCCAAGTACGATTA+TGG | 0.280197 | 1.1:+76898144 | MS.gene71663:CDS |
| ACAAAGGATGGTTTCTTGTT+AGG | 0.282718 | 1.1:+76893291 | MS.gene71663:CDS |
| ACAGAGAGTTGGTTGTTGTT+TGG | 0.284882 | 1.1:-76893108 | None:intergenic |
| TGCCTTTGTTGATGGCTTAT+GGG | 0.286118 | 1.1:+76898241 | MS.gene71663:CDS |
| ATATGATCCAAGTATGAAAT+TGG | 0.303318 | 1.1:-76895643 | None:intergenic |
| GCTTCTCCATGGCCTATTCA+TGG | 0.309670 | 1.1:+76893401 | MS.gene71663:CDS |
| ATGCGGCTAAGGTCAAATTT+TGG | 0.319645 | 1.1:-76898207 | None:intergenic |
| TCTGTCTCCAATTTCATACT+TGG | 0.350785 | 1.1:+76895636 | MS.gene71663:CDS |
| ATCAGTTTCTTCAAGTCAAT+GGG | 0.364667 | 1.1:+76898411 | MS.gene71663:CDS |
| CATCAGTTTCTTCAAGTCAA+TGG | 0.364835 | 1.1:+76898410 | MS.gene71663:CDS |
| AACTCAAAGTTATTTGTAGT+TGG | 0.368834 | 1.1:+76895448 | MS.gene71663:CDS |
| GGATCATATTAGTGCACCTT+TGG | 0.375065 | 1.1:+76895657 | MS.gene71663:CDS |
| TGCACCTTTGGTACTAAGAA+TGG | 0.380394 | 1.1:+76895669 | MS.gene71663:CDS |
| ACTCAAAGTTATTTGTAGTT+GGG | 0.404963 | 1.1:+76895449 | MS.gene71663:CDS |
| ATCTTTATCAGAGAAGAATA+AGG | 0.417364 | 1.1:+76894279 | MS.gene71663:CDS |
| ACATAAGGAAATCAAGAGAT+TGG | 0.417842 | 1.1:-76895959 | None:intergenic |
| GACATGCTGTCATCCATTAC+AGG | 0.418206 | 1.1:+76896003 | MS.gene71663:CDS |
| GTGGTTTATCTTGAAAACTA+TGG | 0.418535 | 1.1:+76898333 | MS.gene71663:CDS |
| AGTAAGTAGTAACCATGAAT+AGG | 0.420033 | 1.1:-76893413 | None:intergenic |
| AAATACACCAGAACAATCAT+TGG | 0.421081 | 1.1:+76894180 | MS.gene71663:CDS |
| AAGCTTTCCATAATCGTACT+TGG | 0.430219 | 1.1:-76898151 | None:intergenic |
| GGAAAAGATGCACATTGATC+AGG | 0.447013 | 1.1:+76895690 | MS.gene71663:CDS |
| GGGTGCGCTGCCGCCGTCGA+AGG | 0.448632 | 1.1:-76893084 | None:intergenic |
| CATCAACAAAGGCAATGATC+TGG | 0.449214 | 1.1:-76898232 | None:intergenic |
| GGCTTCATCCTTGCGGATCA+AGG | 0.449610 | 1.1:+76894202 | MS.gene71663:CDS |
| TTCATCAGCTGAATTTCAAA+AGG | 0.450695 | 1.1:+76895816 | MS.gene71663:CDS |
| GTTTCCGAAGGATAAGAGTA+TGG | 0.460626 | 1.1:-76893051 | None:intergenic |
| GACTTGAAGAAACTGATGAT+AGG | 0.472607 | 1.1:-76898405 | None:intergenic |
| AGAGAGTTGGTTGTTGTTTG+GGG | 0.478775 | 1.1:-76893106 | None:intergenic |
| ATGAAGCCCAATGATTGTTC+TGG | 0.479529 | 1.1:-76894187 | None:intergenic |
| AGGCCATGGAGAAGCAGAAC+CGG | 0.486022 | 1.1:-76893393 | None:intergenic |
| GCCTTTGTTGATGGCTTATG+GGG | 0.492263 | 1.1:+76898242 | MS.gene71663:CDS |
| ATGATCTGGGTATGCGGCTA+AGG | 0.493826 | 1.1:-76898218 | None:intergenic |
| TCATTTCCGCAAGATCGTAC+AGG | 0.501400 | 1.1:-76895402 | None:intergenic |
| ATTTGTAGTTGGGCATTCAC+AGG | 0.502438 | 1.1:+76895459 | MS.gene71663:CDS |
| CATGGAACATACTCTGGAAA+AGG | 0.507066 | 1.1:-76897072 | None:intergenic |
| ATTGCCATACTCTTATCCTT+CGG | 0.509142 | 1.1:+76893047 | MS.gene71663:CDS |
| CCTCCGGTTCTGCTTCTCCA+TGG | 0.509579 | 1.1:+76893390 | MS.gene71663:CDS |
| TTACTTTCAGATTGAAACAA+AGG | 0.517112 | 1.1:+76893275 | MS.gene71663:intron |
| TCAACCGGATATAGTAGAAA+AGG | 0.520659 | 1.1:+76895597 | MS.gene71663:CDS |
| TGTTCAGATGATTGCTACAA+TGG | 0.521008 | 1.1:+76895790 | MS.gene71663:intron |
| GTTCAGATGATTGCTACAAT+GGG | 0.525033 | 1.1:+76895791 | MS.gene71663:intron |
| CTGATAAAGATTTATGTCCA+TGG | 0.529374 | 1.1:-76894267 | None:intergenic |
| TGAGAGACATGAACCTGTAA+TGG | 0.530576 | 1.1:-76896016 | None:intergenic |
| ACAACAACAACGAGGTCCTC+CGG | 0.531545 | 1.1:+76893374 | MS.gene71663:CDS |
| TACTATATCCGGTTGAGTGA+AGG | 0.532690 | 1.1:-76895590 | None:intergenic |
| ATCAACAAAGGCAATGATCT+GGG | 0.532780 | 1.1:-76898231 | None:intergenic |
| AGAGTTGGTTGTTGTTTGGG+GGG | 0.532934 | 1.1:-76893104 | None:intergenic |
| ACTTGAAGAAACTGATGATA+GGG | 0.535072 | 1.1:-76898404 | None:intergenic |
| GCAGTTCCTTGAGTGTGTGC+TGG | 0.538191 | 1.1:-76898296 | None:intergenic |
| TCCATAATCGTACTTGGAGA+AGG | 0.540057 | 1.1:-76898145 | None:intergenic |
| AATACACCAGAACAATCATT+GGG | 0.543527 | 1.1:+76894181 | MS.gene71663:CDS |
| TTACCCTTGCTCTGAATATG+TGG | 0.550867 | 1.1:+76893154 | MS.gene71663:CDS |
| ATGAGTTCATCACAGAGAGT+TGG | 0.551768 | 1.1:-76893119 | None:intergenic |
| GAGAGTTGGTTGTTGTTTGG+GGG | 0.553474 | 1.1:-76893105 | None:intergenic |
| TTTCAGATTGAAACAAAGGA+TGG | 0.556157 | 1.1:+76893279 | MS.gene71663:intron |
| ACTTAGACGAGTATCACATA+AGG | 0.561077 | 1.1:-76895974 | None:intergenic |
| ATCATTGGGCTTCATCCTTG+CGG | 0.568286 | 1.1:+76894195 | MS.gene71663:CDS |
| TAGTAACCATGAATAGGCCA+TGG | 0.571896 | 1.1:-76893407 | None:intergenic |
| TAAACCACCTCAGGTGTGGA+TGG | 0.574032 | 1.1:-76898318 | None:intergenic |
| CGTGGAACACGTTGGAGCCA+TGG | 0.574865 | 1.1:+76894250 | MS.gene71663:CDS |
| CATTTCCGCAAGATCGTACA+GGG | 0.575973 | 1.1:-76895401 | None:intergenic |
| GATGAACTCATTCTTCCCGC+TGG | 0.577409 | 1.1:+76893131 | MS.gene71663:CDS |
| ACTTGGAGAAGGTACCTTTG+CGG | 0.586271 | 1.1:-76898134 | None:intergenic |
| AATACCACATATTCAGAGCA+AGG | 0.587448 | 1.1:-76893158 | None:intergenic |
| AAGATAAACCACCTCAGGTG+TGG | 0.587694 | 1.1:-76898322 | None:intergenic |
| TCAGAGCAAGGGTAACCAGC+GGG | 0.589366 | 1.1:-76893146 | None:intergenic |
| ATTAGCCCTGTACGATCTTG+CGG | 0.594612 | 1.1:+76895396 | MS.gene71663:CDS |
| TTGCTTCAACGAGTCACGCG+TGG | 0.604439 | 1.1:+76896997 | MS.gene71663:CDS |
| ACAATCAGGCAGGTGATGCA+TGG | 0.608662 | 1.1:+76894152 | MS.gene71663:intron |
| AACATCGCTCACTCCTTCGA+CGG | 0.610140 | 1.1:+76893071 | MS.gene71663:CDS |
| ATCGCTCACTCCTTCGACGG+CGG | 0.610445 | 1.1:+76893074 | MS.gene71663:CDS |
| TGATTTCCAGCACACACTCA+AGG | 0.617911 | 1.1:+76898290 | MS.gene71663:CDS |
| GGAACATACTCTGGAAAAGG+TGG | 0.634034 | 1.1:-76897069 | None:intergenic |
| ACTGCCATCCACACCTGAGG+TGG | 0.635259 | 1.1:+76898314 | MS.gene71663:CDS |
| AAGGCAATGATCTGGGTATG+CGG | 0.641163 | 1.1:-76898224 | None:intergenic |
| CATCAAAACCTTGATCCGCA+AGG | 0.641366 | 1.1:-76894210 | None:intergenic |
| TGTTCTCCAGTGATCCGCAA+AGG | 0.657082 | 1.1:+76898120 | MS.gene71663:intron |
| ATACCACATATTCAGAGCAA+GGG | 0.659010 | 1.1:-76893157 | None:intergenic |
| CCTTTGTTGATGGCTTATGG+GGG | 0.663104 | 1.1:+76898243 | MS.gene71663:CDS |
| GGAGTGAGCGATGTTTCCGA+AGG | 0.667016 | 1.1:-76893063 | None:intergenic |
| GGAACTGCCATCCACACCTG+AGG | 0.674091 | 1.1:+76898311 | MS.gene71663:CDS |
| TTCAGAGCAAGGGTAACCAG+CGG | 0.686767 | 1.1:-76893147 | None:intergenic |
| CCATGGAGAAGCAGAACCGG+AGG | 0.690082 | 1.1:-76893390 | None:intergenic |
| TCAGTTTCTTCAAGTCAATG+GGG | 0.699933 | 1.1:+76898412 | MS.gene71663:CDS |
| GAAATGTGCGTGGAACACGT+TGG | 0.739556 | 1.1:+76894242 | MS.gene71663:CDS |
| GTTTGGGTAGGAAATGTGCG+TGG | 0.748523 | 1.1:+76894232 | MS.gene71663:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTGATGTAAAAAATAT+AGG | + | chr1.1:76896322-76896341 | MS.gene71663:intron | 10.0% |
| !!! | AGAAAAAAACAATTTTATTT+AGG | + | chr1.1:76896709-76896728 | MS.gene71663:intron | 10.0% |
| !!! | ATATTTTTTACATCAATAAT+GGG | - | chr1.1:76896322-76896341 | None:intergenic | 10.0% |
| !!! | TATATTTTTTACATCAATAA+TGG | - | chr1.1:76896323-76896342 | None:intergenic | 10.0% |
| !! | AATGAAAAGTTATTTATGTT+TGG | - | chr1.1:76893862-76893881 | None:intergenic | 15.0% |
| !! | ATAAATTAATATATGTGTAG+CGG | - | chr1.1:76896357-76896376 | None:intergenic | 15.0% |
| !! | ATGACATTAAATTAAATTAC+AGG | + | chr1.1:76896965-76896984 | MS.gene71663:intron | 15.0% |
| !! | TCTATTTATAAATTGCTAAA+AGG | + | chr1.1:76897959-76897978 | MS.gene71663:intron | 15.0% |
| !!! | AATTAGTTTCAAACTTTAAA+AGG | - | chr1.1:76894086-76894105 | None:intergenic | 15.0% |
| !!! | TCTTTTCAATTGTAAAATAT+GGG | + | chr1.1:76894377-76894396 | MS.gene71663:intron | 15.0% |
| !!! | TTCTTTTCAATTGTAAAATA+TGG | + | chr1.1:76894376-76894395 | MS.gene71663:intron | 15.0% |
| !!! | TTTTATTTTGGTAAAAATGA+GGG | - | chr1.1:76895311-76895330 | None:intergenic | 15.0% |
| !! | AAAGATATGAATTAGAAAGA+AGG | - | chr1.1:76893217-76893236 | None:intergenic | 20.0% |
| !! | AAGATATGAATTAGAAAGAA+GGG | - | chr1.1:76893216-76893235 | None:intergenic | 20.0% |
| !! | ATTTAAAAGATATGCATTGT+CGG | - | chr1.1:76897604-76897623 | None:intergenic | 20.0% |
| !! | CATAGTGTATTAGTATAATA+AGG | + | chr1.1:76893586-76893605 | MS.gene71663:intron | 20.0% |
| !! | GATAGTAGAAGAATAAATAA+AGG | - | chr1.1:76896484-76896503 | None:intergenic | 20.0% |
| !! | TTAAAAATTCACTTTGTATG+CGG | + | chr1.1:76893986-76894005 | MS.gene71663:intron | 20.0% |
| !!! | AAATTCATTTTGCAATTTTG+TGG | - | chr1.1:76894453-76894472 | None:intergenic | 20.0% |
| !!! | AATATTTGTACAACCATTTT+GGG | + | chr1.1:76894557-76894576 | MS.gene71663:intron | 20.0% |
| !!! | ACAAGTTCTAAATGTATTAA+GGG | + | chr1.1:76894775-76894794 | MS.gene71663:intron | 20.0% |
| !!! | ACTATATTCTGTCATTTTTT+AGG | + | chr1.1:76894017-76894036 | MS.gene71663:intron | 20.0% |
| !!! | ATTATGAGAAGAGTATTATT+TGG | - | chr1.1:76896152-76896171 | None:intergenic | 20.0% |
| !!! | CTATATTCTGTCATTTTTTA+GGG | + | chr1.1:76894018-76894037 | MS.gene71663:intron | 20.0% |
| !!! | CTCATTTTAATCTATAACTT+AGG | + | chr1.1:76896860-76896879 | MS.gene71663:intron | 20.0% |
| !!! | GTTTTATTTTGGTAAAAATG+AGG | - | chr1.1:76895312-76895331 | None:intergenic | 20.0% |
| !!! | TAATATTTGTACAACCATTT+TGG | + | chr1.1:76894556-76894575 | MS.gene71663:intron | 20.0% |
| !!! | TACAAGTTCTAAATGTATTA+AGG | + | chr1.1:76894774-76894793 | MS.gene71663:intron | 20.0% |
| !!! | TATATTCTGTCATTTTTTAG+GGG | + | chr1.1:76894019-76894038 | MS.gene71663:intron | 20.0% |
| !!! | TATATTTTTGAGTTTTGACA+CGG | + | chr1.1:76894861-76894880 | MS.gene71663:intron | 20.0% |
| !!! | TCAATTTAGAATCATTTATG+AGG | - | chr1.1:76893761-76893780 | None:intergenic | 20.0% |
| !!! | TTGAGAAATTTTGATCAATT+GGG | - | chr1.1:76896551-76896570 | None:intergenic | 20.0% |
| !!! | TTTATTTTGGTAAAAATGAG+GGG | - | chr1.1:76895310-76895329 | None:intergenic | 20.0% |
| !!! | TTTTTAGCTGTATATTGATA+AGG | + | chr1.1:76895163-76895182 | MS.gene71663:intron | 20.0% |
| ! | AACTCAAAGTTATTTGTAGT+TGG | + | chr1.1:76895448-76895467 | MS.gene71663:CDS | 25.0% |
| ! | AAGAAACCAATTAAAGATGA+TGG | - | chr1.1:76897100-76897119 | None:intergenic | 25.0% |
| ! | AAGATGCAGTTATTAAAATG+GGG | + | chr1.1:76897527-76897546 | MS.gene71663:intron | 25.0% |
| ! | ACATTATCAAACATGATCAA+AGG | - | chr1.1:76897263-76897282 | None:intergenic | 25.0% |
| ! | ACGATATAGAATAAACAAAC+TGG | - | chr1.1:76897423-76897442 | None:intergenic | 25.0% |
| ! | ACTCAAAGTTATTTGTAGTT+GGG | + | chr1.1:76895449-76895468 | MS.gene71663:CDS | 25.0% |
| ! | ATATGATCCAAGTATGAAAT+TGG | - | chr1.1:76895646-76895665 | None:intergenic | 25.0% |
| ! | ATATGTAACTCTTGTATCTA+CGG | + | chr1.1:76896574-76896593 | MS.gene71663:intron | 25.0% |
| ! | ATCAACATATGCAAAAGAAA+AGG | - | chr1.1:76895871-76895890 | None:intergenic | 25.0% |
| ! | ATCCTTACAAATATGTCTTT+AGG | + | chr1.1:76897622-76897641 | MS.gene71663:intron | 25.0% |
| ! | ATCTTTATCAGAGAAGAATA+AGG | + | chr1.1:76894279-76894298 | MS.gene71663:CDS | 25.0% |
| ! | ATGTTATAGAACTCATTGAA+TGG | + | chr1.1:76894324-76894343 | MS.gene71663:intron | 25.0% |
| ! | ATTAGAAAGAAGGGAAATAT+TGG | - | chr1.1:76893207-76893226 | None:intergenic | 25.0% |
| ! | CAAATAAGAAATGCTTCATT+CGG | + | chr1.1:76895093-76895112 | MS.gene71663:intron | 25.0% |
| ! | CAAGATGCAGTTATTAAAAT+GGG | + | chr1.1:76897526-76897545 | MS.gene71663:intron | 25.0% |
| ! | CAGTGTAAAACTAATTACTA+AGG | - | chr1.1:76897460-76897479 | None:intergenic | 25.0% |
| ! | CTTAAAAATCTGATAGAGTA+TGG | + | chr1.1:76898171-76898190 | MS.gene71663:CDS | 25.0% |
| ! | GGGTTTAACAATAAATTCAA+TGG | - | chr1.1:76893822-76893841 | None:intergenic | 25.0% |
| ! | GTTATAGATTAAAATGAGAG+AGG | - | chr1.1:76896858-76896877 | None:intergenic | 25.0% |
| ! | TAAATAAAGGTCAGATACTA+TGG | - | chr1.1:76896471-76896490 | None:intergenic | 25.0% |
| ! | TCAAGATGCAGTTATTAAAA+TGG | + | chr1.1:76897525-76897544 | MS.gene71663:intron | 25.0% |
| ! | TGGATATATTCATGTAAACA+GGG | - | chr1.1:76893842-76893861 | None:intergenic | 25.0% |
| ! | TGTAAAACTAATTACTAAGG+TGG | - | chr1.1:76897457-76897476 | None:intergenic | 25.0% |
| ! | TTACTTTCAGATTGAAACAA+AGG | + | chr1.1:76893275-76893294 | MS.gene71663:intron | 25.0% |
| ! | TTGGATATATTCATGTAAAC+AGG | - | chr1.1:76893843-76893862 | None:intergenic | 25.0% |
| ! | TTTCCTATAATGTCATTACT+AGG | + | chr1.1:76897666-76897685 | MS.gene71663:intron | 25.0% |
| !! | ATTTTCCATAGCTTACATTT+TGG | + | chr1.1:76895525-76895544 | MS.gene71663:intron | 25.0% |
| !!! | AAACATTTTTTTCTCTCTCT+TGG | - | chr1.1:76896609-76896628 | None:intergenic | 25.0% |
| !!! | AACAATTTTATTTAGGACAC+TGG | + | chr1.1:76896716-76896735 | MS.gene71663:intron | 25.0% |
| !!! | AACCTTTTTTTCTCTTCTTT+TGG | - | chr1.1:76894700-76894719 | None:intergenic | 25.0% |
| !!! | ACCTTTTTTTCTCTTCTTTT+GGG | - | chr1.1:76894699-76894718 | None:intergenic | 25.0% |
| !!! | CATACTCATCAGTTTTATTT+TGG | - | chr1.1:76895323-76895342 | None:intergenic | 25.0% |
| !!! | GTTGAGAAATTTTGATCAAT+TGG | - | chr1.1:76896552-76896571 | None:intergenic | 25.0% |
| !!! | TGAGAAATTTTGATCAATTG+GGG | - | chr1.1:76896550-76896569 | None:intergenic | 25.0% |
| !!! | TTTCTGTTTTTCTTGCTAAT+TGG | + | chr1.1:76893234-76893253 | MS.gene71663:intron | 25.0% |
| !!! | TTTTACTGTGTTATTTGCTT+TGG | + | chr1.1:76898005-76898024 | MS.gene71663:intron | 25.0% |
| AAAACAATAGAGAGAGAAAG+AGG | - | chr1.1:76894673-76894692 | None:intergenic | 30.0% | |
| AAACAATAGAGAGAGAAAGA+GGG | - | chr1.1:76894672-76894691 | None:intergenic | 30.0% | |
| AAATACACCAGAACAATCAT+TGG | + | chr1.1:76894180-76894199 | MS.gene71663:CDS | 30.0% | |
| AAGAGAAAAAGAAACTACAG+CGG | - | chr1.1:76897725-76897744 | None:intergenic | 30.0% | |
| AATACACCAGAACAATCATT+GGG | + | chr1.1:76894181-76894200 | MS.gene71663:CDS | 30.0% | |
| ACATAAGGAAATCAAGAGAT+TGG | - | chr1.1:76895962-76895981 | None:intergenic | 30.0% | |
| ACCTCATTTCTATTAGCAAA+TGG | - | chr1.1:76894810-76894829 | None:intergenic | 30.0% | |
| ACTTATGATGATCTCGAAAA+GGG | + | chr1.1:76895057-76895076 | MS.gene71663:intron | 30.0% | |
| ACTTGAAGAAACTGATGATA+GGG | - | chr1.1:76898407-76898426 | None:intergenic | 30.0% | |
| AGTAAGTAGTAACCATGAAT+AGG | - | chr1.1:76893416-76893435 | None:intergenic | 30.0% | |
| AGTACTTCTTATAAGATCAG+AGG | - | chr1.1:76895040-76895059 | None:intergenic | 30.0% | |
| ATAGAGTTTAAAAGACAGTC+TGG | - | chr1.1:76897944-76897963 | None:intergenic | 30.0% | |
| ATCAGTTTCTTCAAGTCAAT+GGG | + | chr1.1:76898411-76898430 | MS.gene71663:CDS | 30.0% | |
| ATCATACACAAAATGAAAGC+TGG | - | chr1.1:76898035-76898054 | None:intergenic | 30.0% | |
| ATGTGAAAAGGATGATTTAC+AGG | - | chr1.1:76895496-76895515 | None:intergenic | 30.0% | |
| CAAAAGAAAAGGAGAAAAAC+AGG | - | chr1.1:76895860-76895879 | None:intergenic | 30.0% | |
| CAATGAGTTCTATAACATGA+AGG | - | chr1.1:76894322-76894341 | None:intergenic | 30.0% | |
| CATCATCAACCAGTAATTAA+TGG | - | chr1.1:76897858-76897877 | None:intergenic | 30.0% | |
| CATGTTCCATCATCTTTAAT+TGG | + | chr1.1:76897091-76897110 | MS.gene71663:intron | 30.0% | |
| CTCCTAAAGACATATTTGTA+AGG | - | chr1.1:76897627-76897646 | None:intergenic | 30.0% | |
| CTGATAAAGATTTATGTCCA+TGG | - | chr1.1:76894270-76894289 | None:intergenic | 30.0% | |
| GATCAAAGGTAAATTTGTGA+TGG | - | chr1.1:76897249-76897268 | None:intergenic | 30.0% | |
| GTACCTAGTAATGACATTAT+AGG | - | chr1.1:76897672-76897691 | None:intergenic | 30.0% | |
| GTGGTTTATCTTGAAAACTA+TGG | + | chr1.1:76898333-76898352 | MS.gene71663:CDS | 30.0% | |
| TAACTGCATCTTGAAATTGA+CGG | - | chr1.1:76897519-76897538 | None:intergenic | 30.0% | |
| TACTTATGATGATCTCGAAA+AGG | + | chr1.1:76895056-76895075 | MS.gene71663:intron | 30.0% | |
| TAGAACCAAACATACACTAA+AGG | - | chr1.1:76893666-76893685 | None:intergenic | 30.0% | |
| TAGATTAAAATGAGAGAGGA+AGG | - | chr1.1:76896854-76896873 | None:intergenic | 30.0% | |
| TAGCAATTGCCATTAATTAC+TGG | + | chr1.1:76897846-76897865 | MS.gene71663:intron | 30.0% | |
| TATGTATGTCTGTGTTTAGA+AGG | + | chr1.1:76896050-76896069 | MS.gene71663:intron | 30.0% | |
| TCAACAACTAAACTTTCATG+TGG | + | chr1.1:76894506-76894525 | MS.gene71663:intron | 30.0% | |
| TCCCAAAAGAAGAGAAAAAA+AGG | + | chr1.1:76894695-76894714 | MS.gene71663:intron | 30.0% | |
| TGTTTCCAAAATGTAAGCTA+TGG | - | chr1.1:76895533-76895552 | None:intergenic | 30.0% | |
| TTCATCAGCTGAATTTCAAA+AGG | + | chr1.1:76895816-76895835 | MS.gene71663:CDS | 30.0% | |
| TTGAACAGAATGAACAAAGA+AGG | + | chr1.1:76894984-76895003 | MS.gene71663:intron | 30.0% | |
| TTTCAGATTGAAACAAAGGA+TGG | + | chr1.1:76893279-76893298 | MS.gene71663:intron | 30.0% | |
| ! | AAGGTTTTTGAATCATGCTT+AGG | - | chr1.1:76896835-76896854 | None:intergenic | 30.0% |
| ! | ACTTTTCTATACATAGCCAA+GGG | + | chr1.1:76894423-76894442 | MS.gene71663:intron | 30.0% |
| ! | AGCTTTCATTTTGTGTATGA+TGG | + | chr1.1:76898034-76898053 | MS.gene71663:intron | 30.0% |
| ! | ATATCTTGCTACTTCAATGT+GGG | + | chr1.1:76893614-76893633 | MS.gene71663:intron | 30.0% |
| ! | CAGTAATATTTGCAGAGTTT+TGG | + | chr1.1:76893945-76893964 | MS.gene71663:intron | 30.0% |
| ! | CTAAAAGGACATTTGAAGTT+TGG | + | chr1.1:76897974-76897993 | MS.gene71663:intron | 30.0% |
| ! | CTATAACTTAGGAATCCTTT+TGG | + | chr1.1:76896871-76896890 | MS.gene71663:intron | 30.0% |
| ! | TACAAATATGTCTTTAGGAG+AGG | + | chr1.1:76897627-76897646 | MS.gene71663:intron | 30.0% |
| ! | TACTTTTCTATACATAGCCA+AGG | + | chr1.1:76894422-76894441 | MS.gene71663:intron | 30.0% |
| ! | TCAACCTTTTCTACTATATC+CGG | - | chr1.1:76895604-76895623 | None:intergenic | 30.0% |
| ! | TTAACTCATTTTCAGCGATT+GGG | + | chr1.1:76895933-76895952 | MS.gene71663:intron | 30.0% |
| ! | TTATGCCATTTGATACAATC+AGG | + | chr1.1:76894138-76894157 | MS.gene71663:intron | 30.0% |
| ! | TTTTCCATTCTTAGTACCAA+AGG | - | chr1.1:76895676-76895695 | None:intergenic | 30.0% |
| !! | AACTTGTTGAAAACATTCAG+AGG | - | chr1.1:76894889-76894908 | None:intergenic | 30.0% |
| !! | AGAAATTTTGATCAATTGGG+GGG | - | chr1.1:76896548-76896567 | None:intergenic | 30.0% |
| !! | AGCTATTTTGTGACAACTTT+TGG | - | chr1.1:76894726-76894745 | None:intergenic | 30.0% |
| !! | CAATTAAAGATGATGGAACA+TGG | - | chr1.1:76897093-76897112 | None:intergenic | 30.0% |
| !! | CTTGCTATTATTCTTGTCAA+TGG | + | chr1.1:76898075-76898094 | MS.gene71663:intron | 30.0% |
| !! | GAATTTGTTATTGACCTGTT+TGG | + | chr1.1:76893721-76893740 | MS.gene71663:intron | 30.0% |
| !! | GAGAAATTTTGATCAATTGG+GGG | - | chr1.1:76896549-76896568 | None:intergenic | 30.0% |
| !! | GAGAAGAGTATTATTTGGAT+TGG | - | chr1.1:76896147-76896166 | None:intergenic | 30.0% |
| !! | GATATGAAGCAGCTTTAAAT+TGG | + | chr1.1:76897297-76897316 | MS.gene71663:intron | 30.0% |
| !! | GCTATTTTGTGACAACTTTT+GGG | - | chr1.1:76894725-76894744 | None:intergenic | 30.0% |
| !! | TTGATGATGAATCAGCATAT+GGG | + | chr1.1:76897869-76897888 | MS.gene71663:intron | 30.0% |
| !!! | TGTATGTTTGGTTCTACTTT+TGG | + | chr1.1:76893670-76893689 | MS.gene71663:intron | 30.0% |
| AAACATCTTATCCGTCTTAG+GGG | + | chr1.1:76895548-76895567 | MS.gene71663:intron | 35.0% | |
| AACAATAGAGAGAGAAAGAG+GGG | - | chr1.1:76894671-76894690 | None:intergenic | 35.0% | |
| AAGCTTTCCATAATCGTACT+TGG | - | chr1.1:76898154-76898173 | None:intergenic | 35.0% | |
| AATACCACATATTCAGAGCA+AGG | - | chr1.1:76893161-76893180 | None:intergenic | 35.0% | |
| AATGCTGGTAGAATGTGAAA+AGG | - | chr1.1:76895508-76895527 | None:intergenic | 35.0% | |
| ACAAAGGATGGTTTCTTGTT+AGG | + | chr1.1:76893291-76893310 | MS.gene71663:CDS | 35.0% | |
| ACAGTCTGGTGGAAATAATT+AGG | - | chr1.1:76897930-76897949 | None:intergenic | 35.0% | |
| ACTTAGACGAGTATCACATA+AGG | - | chr1.1:76895977-76895996 | None:intergenic | 35.0% | |
| AGCTTCCTTTAGTGTATGTT+TGG | + | chr1.1:76893658-76893677 | MS.gene71663:intron | 35.0% | |
| ATACCACATATTCAGAGCAA+GGG | - | chr1.1:76893160-76893179 | None:intergenic | 35.0% | |
| ATCAACAAAGGCAATGATCT+GGG | - | chr1.1:76898234-76898253 | None:intergenic | 35.0% | |
| ATGTAAGCTATGGAAAATGC+TGG | - | chr1.1:76895523-76895542 | None:intergenic | 35.0% | |
| ATTGACCTGTTTGGATGTAT+TGG | + | chr1.1:76893730-76893749 | MS.gene71663:intron | 35.0% | |
| ATTGCCATACTCTTATCCTT+CGG | + | chr1.1:76893047-76893066 | MS.gene71663:CDS | 35.0% | |
| ATTGTTTGATCTTGAGCAGT+TGG | + | chr1.1:76895128-76895147 | MS.gene71663:intron | 35.0% | |
| CAAAACCAATACATCCAAAC+AGG | - | chr1.1:76893738-76893757 | None:intergenic | 35.0% | |
| CATCAGTTTCTTCAAGTCAA+TGG | + | chr1.1:76898410-76898429 | MS.gene71663:CDS | 35.0% | |
| GAAAAATAGAGACCTCTCAT+TGG | - | chr1.1:76897487-76897506 | None:intergenic | 35.0% | |
| GAAACATCTTATCCGTCTTA+GGG | + | chr1.1:76895547-76895566 | MS.gene71663:intron | 35.0% | |
| GAAATAATTGTCCCCTAAGA+CGG | - | chr1.1:76895562-76895581 | None:intergenic | 35.0% | |
| GAATAAACAAACTGGTACCA+AGG | - | chr1.1:76897415-76897434 | None:intergenic | 35.0% | |
| GACTTGAAGAAACTGATGAT+AGG | - | chr1.1:76898408-76898427 | None:intergenic | 35.0% | |
| GGGAAGTAATAATGTTCAGT+GGG | + | chr1.1:76897342-76897361 | MS.gene71663:intron | 35.0% | |
| GTTCAGATGATTGCTACAAT+GGG | + | chr1.1:76895791-76895810 | MS.gene71663:intron | 35.0% | |
| TAATATATGTGTAGCGGTGA+TGG | - | chr1.1:76896351-76896370 | None:intergenic | 35.0% | |
| TCAACCGGATATAGTAGAAA+AGG | + | chr1.1:76895597-76895616 | MS.gene71663:CDS | 35.0% | |
| TCAGTTTCTTCAAGTCAATG+GGG | + | chr1.1:76898412-76898431 | MS.gene71663:CDS | 35.0% | |
| TCTCAAAAGTTGTCCCAAAA+TGG | - | chr1.1:76894573-76894592 | None:intergenic | 35.0% | |
| TCTGTCTCCAATTTCATACT+TGG | + | chr1.1:76895636-76895655 | MS.gene71663:CDS | 35.0% | |
| TGACTAGAATTCTTCGACAA+TGG | - | chr1.1:76895218-76895237 | None:intergenic | 35.0% | |
| TGGCATTCATGAAAGACAAA+AGG | - | chr1.1:76896176-76896195 | None:intergenic | 35.0% | |
| TGTTCAGATGATTGCTACAA+TGG | + | chr1.1:76895790-76895809 | MS.gene71663:intron | 35.0% | |
| TTGAAATTGACGGAATGACA+TGG | - | chr1.1:76897509-76897528 | None:intergenic | 35.0% | |
| TTTGCTAAGCTGGAAATACA+TGG | - | chr1.1:76895894-76895913 | None:intergenic | 35.0% | |
| ! | AAATATGTCTTTAGGAGAGG+AGG | + | chr1.1:76897630-76897649 | MS.gene71663:intron | 35.0% |
| ! | CTTAACTCATTTTCAGCGAT+TGG | + | chr1.1:76895932-76895951 | MS.gene71663:intron | 35.0% |
| ! | GATATCTTGCTACTTCAATG+TGG | + | chr1.1:76893613-76893632 | MS.gene71663:intron | 35.0% |
| ! | GCCATTTGCTAATAGAAATG+AGG | + | chr1.1:76894806-76894825 | MS.gene71663:intron | 35.0% |
| ! | GCTGTAGTTTCTTTTTCTCT+TGG | + | chr1.1:76897724-76897743 | MS.gene71663:intron | 35.0% |
| ! | TACATAATTGATTCTCGAGG+TGG | + | chr1.1:76893697-76893716 | MS.gene71663:intron | 35.0% |
| ! | TCCAGCTTAGCAAATTTTCA+CGG | + | chr1.1:76895900-76895919 | MS.gene71663:intron | 35.0% |
| ! | TCTGTTCAACCTTTTCAAAC+TGG | - | chr1.1:76894973-76894992 | None:intergenic | 35.0% |
| ! | TGACTTTTCTGACTATTCAC+TGG | + | chr1.1:76897138-76897157 | MS.gene71663:intron | 35.0% |
| ! | TGTCCTTTTGTAGCACTTTT+GGG | + | chr1.1:76895357-76895376 | MS.gene71663:intron | 35.0% |
| ! | TTGTCCTTTTGTAGCACTTT+TGG | + | chr1.1:76895356-76895375 | MS.gene71663:intron | 35.0% |
| ! | TTTTCAGCACCAGTTTGAAA+AGG | + | chr1.1:76894961-76894980 | MS.gene71663:intron | 35.0% |
| !! | AATCCCAAAAGTGCTACAAA+AGG | - | chr1.1:76895363-76895382 | None:intergenic | 35.0% |
| !! | GAAAAGGTGGTTCAAGTTTT+TGG | - | chr1.1:76897059-76897078 | None:intergenic | 35.0% |
| !! | GGATCAAGGTTTTGATGTTT+GGG | + | chr1.1:76894216-76894235 | MS.gene71663:CDS | 35.0% |
| !! | GTTGATGATGAATCAGCATA+TGG | + | chr1.1:76897868-76897887 | MS.gene71663:intron | 35.0% |
| !! | GTTTTGGACAGTGTTTGAAT+TGG | + | chr1.1:76893961-76893980 | MS.gene71663:intron | 35.0% |
| !! | TTCAAGTTTTTGGAGGATGA+TGG | - | chr1.1:76897049-76897068 | None:intergenic | 35.0% |
| !! | TTTTCAAGATAAACCACCTC+AGG | - | chr1.1:76898330-76898349 | None:intergenic | 35.0% |
| !!! | ATGTTTGGTTCTACTTTTGG+AGG | + | chr1.1:76893673-76893692 | MS.gene71663:intron | 35.0% |
| !!! | TGTTTGGTTCTACTTTTGGA+GGG | + | chr1.1:76893674-76893693 | MS.gene71663:intron | 35.0% |
| !!! | TTTTGTAGCACTTTTGGGAT+TGG | + | chr1.1:76895362-76895381 | MS.gene71663:intron | 35.0% |
| AAACAGGACAGAACGAAAAC+TGG | - | chr1.1:76895844-76895863 | None:intergenic | 40.0% | |
| ACCTGCCTGATTGTATCAAA+TGG | - | chr1.1:76894146-76894165 | None:intergenic | 40.0% | |
| ACCTTCTCCAAGTACGATTA+TGG | + | chr1.1:76898144-76898163 | MS.gene71663:CDS | 40.0% | |
| AGCCAGCAAAGTAATTGCAA+TGG | - | chr1.1:76896196-76896215 | None:intergenic | 40.0% | |
| ATACACGCAGAATGACCAAA+AGG | - | chr1.1:76896889-76896908 | None:intergenic | 40.0% | |
| ATGAAGCACATACACACACA+TGG | - | chr1.1:76893569-76893588 | None:intergenic | 40.0% | |
| ATGAAGCCCAATGATTGTTC+TGG | - | chr1.1:76894190-76894209 | None:intergenic | 40.0% | |
| ATGAGTTCATCACAGAGAGT+TGG | - | chr1.1:76893122-76893141 | None:intergenic | 40.0% | |
| ATGATGAATCAGCATATGGG+TGG | + | chr1.1:76897872-76897891 | MS.gene71663:intron | 40.0% | |
| ATGGAACATGGAACATACTC+TGG | - | chr1.1:76897081-76897100 | None:intergenic | 40.0% | |
| ATGGCTCGTATGAGTGTTAT+AGG | + | chr1.1:76896654-76896673 | MS.gene71663:intron | 40.0% | |
| ATTTGTAGTTGGGCATTCAC+AGG | + | chr1.1:76895459-76895478 | MS.gene71663:CDS | 40.0% | |
| CAGATCATTGCCTTTGTTGA+TGG | + | chr1.1:76898233-76898252 | MS.gene71663:CDS | 40.0% | |
| CATCAACAAAGGCAATGATC+TGG | - | chr1.1:76898235-76898254 | None:intergenic | 40.0% | |
| CGTATGAGTGTTATAGGTGT+CGG | + | chr1.1:76896660-76896679 | MS.gene71663:intron | 40.0% | |
| CTTAGGCAAGTTATGAAGCA+CGG | - | chr1.1:76896818-76896837 | None:intergenic | 40.0% | |
| CTTCGTACAAATATGCTCCT+TGG | - | chr1.1:76897813-76897832 | None:intergenic | 40.0% | |
| GAGTTTAAAAGACAGTCTGG+TGG | - | chr1.1:76897941-76897960 | None:intergenic | 40.0% | |
| GCTCAAAAACAACAACAACG+AGG | + | chr1.1:76893366-76893385 | MS.gene71663:CDS | 40.0% | |
| GGAAAAGATGCACATTGATC+AGG | + | chr1.1:76895690-76895709 | MS.gene71663:CDS | 40.0% | |
| GGAAACATCTTATCCGTCTT+AGG | + | chr1.1:76895546-76895565 | MS.gene71663:intron | 40.0% | |
| GGATCATATTAGTGCACCTT+TGG | + | chr1.1:76895657-76895676 | MS.gene71663:CDS | 40.0% | |
| GGGGAAGTAATAATGTTCAG+TGG | + | chr1.1:76897341-76897360 | MS.gene71663:intron | 40.0% | |
| GTTTCCGAAGGATAAGAGTA+TGG | - | chr1.1:76893054-76893073 | None:intergenic | 40.0% | |
| TACTATATCCGGTTGAGTGA+AGG | - | chr1.1:76895593-76895612 | None:intergenic | 40.0% | |
| TAGTAACCATGAATAGGCCA+TGG | - | chr1.1:76893410-76893429 | None:intergenic | 40.0% | |
| TCCATAATCGTACTTGGAGA+AGG | - | chr1.1:76898148-76898167 | None:intergenic | 40.0% | |
| TCTCTTCTACATGACAACCT+TGG | + | chr1.1:76897395-76897414 | MS.gene71663:intron | 40.0% | |
| TGACATGCTTTATCTTGCCA+AGG | + | chr1.1:76897793-76897812 | MS.gene71663:intron | 40.0% | |
| TGAGAGACATGAACCTGTAA+TGG | - | chr1.1:76896019-76896038 | None:intergenic | 40.0% | |
| TGCACCTTTGGTACTAAGAA+TGG | + | chr1.1:76895669-76895688 | MS.gene71663:CDS | 40.0% | |
| TGCCATTGCAATTACTTTGC+TGG | + | chr1.1:76896191-76896210 | MS.gene71663:intron | 40.0% | |
| TTACACTGACATCCAATGAG+AGG | + | chr1.1:76897472-76897491 | MS.gene71663:intron | 40.0% | |
| TTTGTCTGAGTTGTCTGACA+TGG | + | chr1.1:76896635-76896654 | MS.gene71663:intron | 40.0% | |
| ! | ACAGAGAGTTGGTTGTTGTT+TGG | - | chr1.1:76893111-76893130 | None:intergenic | 40.0% |
| ! | ACGTCTTCTATCAGAAGTGT+CGG | - | chr1.1:76893495-76893514 | None:intergenic | 40.0% |
| ! | ATACGATGTGACTTGTGCTT+TGG | + | chr1.1:76895284-76895303 | MS.gene71663:intron | 40.0% |
| ! | ATGCGGCTAAGGTCAAATTT+TGG | - | chr1.1:76898210-76898229 | None:intergenic | 40.0% |
| ! | CAGCTTAGCAAATTTTCACG+GGG | + | chr1.1:76895902-76895921 | MS.gene71663:intron | 40.0% |
| ! | CATGGAACATACTCTGGAAA+AGG | - | chr1.1:76897075-76897094 | None:intergenic | 40.0% |
| ! | CCAGCTTAGCAAATTTTCAC+GGG | + | chr1.1:76895901-76895920 | MS.gene71663:intron | 40.0% |
| ! | GGGTACATAATTGATTCTCG+AGG | + | chr1.1:76893694-76893713 | MS.gene71663:intron | 40.0% |
| ! | TTACCCTTGCTCTGAATATG+TGG | + | chr1.1:76893154-76893173 | MS.gene71663:CDS | 40.0% |
| !! | AAGGTGGTTCAAGTTTTTGG+AGG | - | chr1.1:76897056-76897075 | None:intergenic | 40.0% |
| !! | AGAGAGTTGGTTGTTGTTTG+GGG | - | chr1.1:76893109-76893128 | None:intergenic | 40.0% |
| !! | CAAGGTTTTGATGTTTGGGT+AGG | + | chr1.1:76894220-76894239 | MS.gene71663:CDS | 40.0% |
| !! | CAGAGAGTTGGTTGTTGTTT+GGG | - | chr1.1:76893110-76893129 | None:intergenic | 40.0% |
| !! | CGGATCAAGGTTTTGATGTT+TGG | + | chr1.1:76894215-76894234 | MS.gene71663:CDS | 40.0% |
| !! | TGCCTTTGTTGATGGCTTAT+GGG | + | chr1.1:76898241-76898260 | MS.gene71663:CDS | 40.0% |
| !! | TTGCCTTTGTTGATGGCTTA+TGG | + | chr1.1:76898240-76898259 | MS.gene71663:CDS | 40.0% |
| !!! | CTGTCATTTTTTAGGGGAAG+TGG | + | chr1.1:76894025-76894044 | MS.gene71663:intron | 40.0% |
| !!! | TTTTTGGAGGATGATGGATG+AGG | - | chr1.1:76897043-76897062 | None:intergenic | 40.0% |
| AAGATAAACCACCTCAGGTG+TGG | - | chr1.1:76898325-76898344 | None:intergenic | 45.0% | |
| AAGGCAATGATCTGGGTATG+CGG | - | chr1.1:76898227-76898246 | None:intergenic | 45.0% | |
| AATCAGCATATGGGTGGAAG+TGG | + | chr1.1:76897878-76897897 | MS.gene71663:intron | 45.0% | |
| ATCATTGGGCTTCATCCTTG+CGG | + | chr1.1:76894195-76894214 | MS.gene71663:CDS | 45.0% | |
| ATTAGCCCTGTACGATCTTG+CGG | + | chr1.1:76895396-76895415 | MS.gene71663:CDS | 45.0% | |
| CATCAAAACCTTGATCCGCA+AGG | - | chr1.1:76894213-76894232 | None:intergenic | 45.0% | |
| CATTTCCGCAAGATCGTACA+GGG | - | chr1.1:76895404-76895423 | None:intergenic | 45.0% | |
| CGCACAATTCAGATCAGAGA+GGG | - | chr1.1:76896293-76896312 | None:intergenic | 45.0% | |
| CTCGAAAAGGGAGAACAGAA+TGG | + | chr1.1:76895069-76895088 | MS.gene71663:intron | 45.0% | |
| CTTCTGATAGAAGACGTGTC+TGG | + | chr1.1:76893498-76893517 | MS.gene71663:intron | 45.0% | |
| GACATGCTGTCATCCATTAC+AGG | + | chr1.1:76896003-76896022 | MS.gene71663:CDS | 45.0% | |
| GCCATTTGATACAATCAGGC+AGG | + | chr1.1:76894142-76894161 | MS.gene71663:intron | 45.0% | |
| GGATCACTGGAGAACATATG+AGG | - | chr1.1:76898116-76898135 | None:intergenic | 45.0% | |
| TCATTTCCGCAAGATCGTAC+AGG | - | chr1.1:76895405-76895424 | None:intergenic | 45.0% | |
| TGATTTCCAGCACACACTCA+AGG | + | chr1.1:76898290-76898309 | MS.gene71663:CDS | 45.0% | |
| TTACTTCGACACTCCTAGAC+CGG | - | chr1.1:76896689-76896708 | None:intergenic | 45.0% | |
| ! | CGGCTAAGGTCAAATTTTGG+TGG | - | chr1.1:76898207-76898226 | None:intergenic | 45.0% |
| ! | GCAATTTTGTGGAACACCCT+TGG | - | chr1.1:76894442-76894461 | None:intergenic | 45.0% |
| ! | GGAACATACTCTGGAAAAGG+TGG | - | chr1.1:76897072-76897091 | None:intergenic | 45.0% |
| ! | TTTTGCTGCCTTCACTCAAC+CGG | + | chr1.1:76895582-76895601 | MS.gene71663:CDS | 45.0% |
| !! | ACTTGGAGAAGGTACCTTTG+CGG | - | chr1.1:76898137-76898156 | None:intergenic | 45.0% |
| !! | AGAGTTGGTTGTTGTTTGGG+GGG | - | chr1.1:76893107-76893126 | None:intergenic | 45.0% |
| !! | CCCGTGAAAATTTGCTAAGC+TGG | - | chr1.1:76895904-76895923 | None:intergenic | 45.0% |
| !! | CCTTTGTTGATGGCTTATGG+GGG | + | chr1.1:76898243-76898262 | MS.gene71663:CDS | 45.0% |
| !! | GAGAGTTGGTTGTTGTTTGG+GGG | - | chr1.1:76893108-76893127 | None:intergenic | 45.0% |
| !! | GCCTTTGTTGATGGCTTATG+GGG | + | chr1.1:76898242-76898261 | MS.gene71663:CDS | 45.0% |
| !! | GCGCTGTTTTCAATTAGCAG+TGG | + | chr1.1:76897160-76897179 | MS.gene71663:intron | 45.0% |
| !! | TATATTAATTTATTTATAGA+CGG | + | chr1.1:76896364-76896383 | MS.gene71663:intron | 5.0% |
| AACATCGCTCACTCCTTCGA+CGG | + | chr1.1:76893071-76893090 | MS.gene71663:CDS | 50.0% | |
| ACAACAACAACGAGGTCCTC+CGG | + | chr1.1:76893374-76893393 | MS.gene71663:CDS | 50.0% | |
| ACAATCAGGCAGGTGATGCA+TGG | + | chr1.1:76894152-76894171 | MS.gene71663:intron | 50.0% | |
| ACGTGTCGTACGAGTGTCAT+GGG | + | chr1.1:76896754-76896773 | MS.gene71663:intron | 50.0% | |
| ATGATCTGGGTATGCGGCTA+AGG | - | chr1.1:76898221-76898240 | None:intergenic | 50.0% | |
| CCCCCATAAGCCATCAACAA+AGG | - | chr1.1:76898246-76898265 | None:intergenic | 50.0% | |
| GAAATGTGCGTGGAACACGT+TGG | + | chr1.1:76894242-76894261 | MS.gene71663:CDS | 50.0% | |
| GATGAACTCATTCTTCCCGC+TGG | + | chr1.1:76893131-76893150 | MS.gene71663:CDS | 50.0% | |
| GCGCACAATTCAGATCAGAG+AGG | - | chr1.1:76896294-76896313 | None:intergenic | 50.0% | |
| GCTTCTCCATGGCCTATTCA+TGG | + | chr1.1:76893401-76893420 | MS.gene71663:CDS | 50.0% | |
| GTTTGGGTAGGAAATGTGCG+TGG | + | chr1.1:76894232-76894251 | MS.gene71663:CDS | 50.0% | |
| TAAACCACCTCAGGTGTGGA+TGG | - | chr1.1:76898321-76898340 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACCTCT+AGG | - | chr1.1:76896807-76896826 | None:intergenic | 50.0% | |
| TCAGATCAGAGAGGGTGAGT+AGG | - | chr1.1:76896285-76896304 | None:intergenic | 50.0% | |
| TGTTCTCCAGTGATCCGCAA+AGG | + | chr1.1:76898120-76898139 | MS.gene71663:intron | 50.0% | |
| TTCAGAGCAAGGGTAACCAG+CGG | - | chr1.1:76893150-76893169 | None:intergenic | 50.0% | |
| ! | AAGGTACCTTTGCGGATCAC+TGG | - | chr1.1:76898129-76898148 | None:intergenic | 50.0% |
| !! | GTGTTATAGGTGTCGGACAC+CGG | + | chr1.1:76896667-76896686 | MS.gene71663:intron | 50.0% |
| !!! | AGCACTTTTGGGATTGGAGC+TGG | + | chr1.1:76895368-76895387 | MS.gene71663:intron | 50.0% |
| AGGCCATGGAGAAGCAGAAC+CGG | - | chr1.1:76893396-76893415 | None:intergenic | 55.0% | |
| CACGTGTCGTACGAGTGTCA+TGG | + | chr1.1:76896753-76896772 | MS.gene71663:intron | 55.0% | |
| GACACTCGTACGACACGTGT+CGG | - | chr1.1:76896752-76896771 | None:intergenic | 55.0% | |
| GCAGTTCCTTGAGTGTGTGC+TGG | - | chr1.1:76898299-76898318 | None:intergenic | 55.0% | |
| GGAGTGAGCGATGTTTCCGA+AGG | - | chr1.1:76893066-76893085 | None:intergenic | 55.0% | |
| GGCTTCATCCTTGCGGATCA+AGG | + | chr1.1:76894202-76894221 | MS.gene71663:CDS | 55.0% | |
| TCAGAGCAAGGGTAACCAGC+GGG | - | chr1.1:76893149-76893168 | None:intergenic | 55.0% | |
| TTGCTTCAACGAGTCACGCG+TGG | + | chr1.1:76896997-76897016 | MS.gene71663:CDS | 55.0% | |
| ! | TACGAGTGTCATGGGAGTGC+CGG | + | chr1.1:76896762-76896781 | MS.gene71663:intron | 55.0% |
| ACTGCCATCCACACCTGAGG+TGG | + | chr1.1:76898314-76898333 | MS.gene71663:CDS | 60.0% | |
| ATCGCTCACTCCTTCGACGG+CGG | + | chr1.1:76893074-76893093 | MS.gene71663:CDS | 60.0% | |
| CCATGGAGAAGCAGAACCGG+AGG | - | chr1.1:76893393-76893412 | None:intergenic | 60.0% | |
| CCTCCGGTTCTGCTTCTCCA+TGG | + | chr1.1:76893390-76893409 | MS.gene71663:CDS | 60.0% | |
| CGTGGAACACGTTGGAGCCA+TGG | + | chr1.1:76894250-76894269 | MS.gene71663:CDS | 60.0% | |
| GGAACTGCCATCCACACCTG+AGG | + | chr1.1:76898311-76898330 | MS.gene71663:CDS | 60.0% | |
| !! | CTCTAGGACTAGGCGTGTCG+CGG | - | chr1.1:76896791-76896810 | None:intergenic | 60.0% |
| !! | GCACGGACACCTCTAGGACT+AGG | - | chr1.1:76896801-76896820 | None:intergenic | 60.0% |
| !! | TAGGTGTCGGACACCGGTCT+AGG | + | chr1.1:76896673-76896692 | MS.gene71663:intron | 60.0% |
| ACTAGGCGTGTCGCGGTGTC+CGG | - | chr1.1:76896784-76896803 | None:intergenic | 65.0% | |
| CGCGACACGCCTAGTCCTAG+AGG | + | chr1.1:76896789-76896808 | MS.gene71663:intron | 65.0% | |
| ! | GGGTGCGCTGCCGCCGTCGA+AGG | - | chr1.1:76893087-76893106 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 76893023 | 76898452 | 76893023 | ID=MS.gene71663 |
| chr1.1 | mRNA | 76893023 | 76898452 | 76893023 | ID=MS.gene71663.t1;Parent=MS.gene71663 |
| chr1.1 | exon | 76893023 | 76893175 | 76893023 | ID=MS.gene71663.t1.exon1;Parent=MS.gene71663.t1 |
| chr1.1 | CDS | 76893023 | 76893175 | 76893023 | ID=cds.MS.gene71663.t1;Parent=MS.gene71663.t1 |
| chr1.1 | exon | 76893285 | 76893422 | 76893285 | ID=MS.gene71663.t1.exon2;Parent=MS.gene71663.t1 |
| chr1.1 | CDS | 76893285 | 76893422 | 76893285 | ID=cds.MS.gene71663.t1;Parent=MS.gene71663.t1 |
| chr1.1 | exon | 76894160 | 76894300 | 76894160 | ID=MS.gene71663.t1.exon3;Parent=MS.gene71663.t1 |
| chr1.1 | CDS | 76894160 | 76894300 | 76894160 | ID=cds.MS.gene71663.t1;Parent=MS.gene71663.t1 |
| chr1.1 | exon | 76895370 | 76895480 | 76895370 | ID=MS.gene71663.t1.exon4;Parent=MS.gene71663.t1 |
| chr1.1 | CDS | 76895370 | 76895480 | 76895370 | ID=cds.MS.gene71663.t1;Parent=MS.gene71663.t1 |
| chr1.1 | exon | 76895568 | 76895711 | 76895568 | ID=MS.gene71663.t1.exon5;Parent=MS.gene71663.t1 |
| chr1.1 | CDS | 76895568 | 76895711 | 76895568 | ID=cds.MS.gene71663.t1;Parent=MS.gene71663.t1 |
| chr1.1 | exon | 76895797 | 76895837 | 76895797 | ID=MS.gene71663.t1.exon6;Parent=MS.gene71663.t1 |
| chr1.1 | CDS | 76895797 | 76895837 | 76895797 | ID=cds.MS.gene71663.t1;Parent=MS.gene71663.t1 |
| chr1.1 | exon | 76895948 | 76896024 | 76895948 | ID=MS.gene71663.t1.exon7;Parent=MS.gene71663.t1 |
| chr1.1 | CDS | 76895948 | 76896024 | 76895948 | ID=cds.MS.gene71663.t1;Parent=MS.gene71663.t1 |
| chr1.1 | exon | 76896987 | 76897082 | 76896987 | ID=MS.gene71663.t1.exon8;Parent=MS.gene71663.t1 |
| chr1.1 | CDS | 76896987 | 76897082 | 76896987 | ID=cds.MS.gene71663.t1;Parent=MS.gene71663.t1 |
| chr1.1 | exon | 76898130 | 76898452 | 76898130 | ID=MS.gene71663.t1.exon9;Parent=MS.gene71663.t1 |
| chr1.1 | CDS | 76898130 | 76898452 | 76898130 | ID=cds.MS.gene71663.t1;Parent=MS.gene71663.t1 |
| Gene Sequence |
| Protein sequence |
