Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060315.t1 | XP_013470044.1 | 94.3 | 405 | 12 | 1 | 1 | 394 | 1 | 405 | 4.30E-221 | 776.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060315.t1 | Q71DJ5 | 61.6 | 391 | 147 | 2 | 5 | 393 | 3 | 392 | 2.0e-142 | 506.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060315.t1 | A0A072VQK3 | 94.3 | 405 | 12 | 1 | 1 | 394 | 1 | 405 | 3.1e-221 | 776.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene060313 | MS.gene060315 | 0.973846 | 3.99E-137 | -1.69E-46 |
| MS.gene060315 | MS.gene061801 | 0.80075 | 1.24E-48 | -1.69E-46 |
| MS.gene060315 | MS.gene57316 | 0.805397 | 1.36E-49 | -1.69E-46 |
| MS.gene060315 | MS.gene73248 | 0.815071 | 1.12E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene060064 | MS.gene060315 | PPI |
| MS.gene060063 | MS.gene060315 | PPI |
| MS.gene060315 | MS.gene040400 | PPI |
| MS.gene040399 | MS.gene060315 | PPI |
| MS.gene79184 | MS.gene060315 | PPI |
| MS.gene060065 | MS.gene060315 | PPI |
| MS.gene060315 | MS.gene62511 | PPI |
| MS.gene040398 | MS.gene060315 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060315.t1 | MTR_1g107330 | 95.802 | 405 | 6 | 1 | 1 | 394 | 1 | 405 | 0.0 | 800 |
| MS.gene060315.t1 | MTR_1g107330 | 94.631 | 298 | 5 | 1 | 1 | 287 | 1 | 298 | 0.0 | 580 |
| MS.gene060315.t1 | MTR_5g084950 | 41.370 | 365 | 207 | 5 | 29 | 386 | 36 | 400 | 1.21e-106 | 320 |
| MS.gene060315.t1 | MTR_3g081060 | 42.857 | 364 | 197 | 5 | 35 | 387 | 47 | 410 | 5.82e-103 | 311 |
| MS.gene060315.t1 | MTR_7g081050 | 41.803 | 366 | 196 | 6 | 35 | 387 | 43 | 404 | 1.41e-102 | 310 |
| MS.gene060315.t1 | MTR_3g081040 | 41.322 | 363 | 203 | 5 | 35 | 387 | 43 | 405 | 2.02e-101 | 306 |
| MS.gene060315.t1 | MTR_6g033965 | 43.646 | 362 | 193 | 5 | 35 | 387 | 44 | 403 | 4.85e-100 | 303 |
| MS.gene060315.t1 | MTR_7g029365 | 39.785 | 372 | 212 | 4 | 29 | 388 | 41 | 412 | 5.27e-100 | 303 |
| MS.gene060315.t1 | MTR_7g081060 | 40.720 | 361 | 204 | 4 | 35 | 386 | 44 | 403 | 1.41e-96 | 294 |
| MS.gene060315.t1 | MTR_3g080980 | 40.055 | 362 | 208 | 5 | 35 | 387 | 43 | 404 | 6.91e-92 | 282 |
| MS.gene060315.t1 | MTR_6g033975 | 42.308 | 364 | 194 | 8 | 35 | 387 | 44 | 402 | 2.25e-90 | 278 |
| MS.gene060315.t1 | MTR_6g023740 | 34.465 | 383 | 236 | 5 | 19 | 386 | 30 | 412 | 1.29e-85 | 266 |
| MS.gene060315.t1 | MTR_6g023715 | 33.508 | 382 | 222 | 6 | 19 | 386 | 30 | 393 | 6.74e-81 | 253 |
| MS.gene060315.t1 | MTR_6g023750 | 32.955 | 352 | 221 | 5 | 50 | 386 | 4 | 355 | 9.81e-73 | 231 |
| MS.gene060315.t1 | MTR_7g029365 | 41.729 | 266 | 148 | 2 | 29 | 287 | 41 | 306 | 1.64e-71 | 226 |
| MS.gene060315.t1 | MTR_0595s0010 | 39.665 | 179 | 100 | 2 | 35 | 205 | 46 | 224 | 2.06e-43 | 154 |
| MS.gene060315.t1 | MTR_5g006650 | 40.645 | 155 | 82 | 3 | 57 | 206 | 44 | 193 | 3.76e-34 | 127 |
| MS.gene060315.t1 | MTR_5g049630 | 65.385 | 52 | 11 | 1 | 256 | 307 | 34 | 78 | 2.32e-15 | 72.0 |
| MS.gene060315.t1 | MTR_6g085070 | 29.412 | 153 | 89 | 4 | 36 | 187 | 160 | 294 | 1.39e-13 | 72.8 |
| MS.gene060315.t1 | MTR_6g085070 | 29.412 | 153 | 89 | 4 | 36 | 187 | 292 | 426 | 1.76e-13 | 72.4 |
| MS.gene060315.t1 | MTR_8g103850 | 33.071 | 127 | 80 | 3 | 36 | 161 | 298 | 420 | 5.63e-13 | 70.9 |
| MS.gene060315.t1 | MTR_5g049820 | 90.625 | 32 | 3 | 0 | 256 | 287 | 903 | 934 | 1.19e-12 | 70.1 |
| MS.gene060315.t1 | MTR_7g451290 | 85.294 | 34 | 2 | 1 | 257 | 287 | 65 | 98 | 2.17e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060315.t1 | AT2G15230 | 64.917 | 362 | 125 | 1 | 34 | 393 | 31 | 392 | 0.0 | 512 |
| MS.gene060315.t1 | AT5G14180 | 37.121 | 396 | 228 | 6 | 6 | 386 | 26 | 415 | 8.11e-96 | 293 |
| MS.gene060315.t1 | AT5G14180 | 40.065 | 307 | 178 | 3 | 86 | 386 | 9 | 315 | 1.41e-82 | 255 |
| MS.gene060315.t1 | AT5G14180 | 40.000 | 305 | 177 | 3 | 88 | 386 | 2 | 306 | 2.48e-82 | 254 |
| MS.gene060315.t1 | AT5G14180 | 37.329 | 292 | 167 | 4 | 6 | 287 | 26 | 311 | 3.05e-68 | 218 |
| MS.gene060315.t1 | AT5G14180 | 37.083 | 240 | 141 | 3 | 28 | 257 | 42 | 281 | 4.96e-55 | 184 |
| MS.gene060315.t1 | AT1G73920 | 33.071 | 127 | 80 | 3 | 36 | 161 | 227 | 349 | 3.26e-13 | 71.6 |
| MS.gene060315.t1 | AT1G73920 | 33.071 | 127 | 80 | 3 | 36 | 161 | 296 | 418 | 3.91e-13 | 71.6 |
| MS.gene060315.t1 | AT1G18460 | 34.646 | 127 | 78 | 3 | 36 | 161 | 294 | 416 | 6.21e-13 | 70.9 |
Find 0 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTGATGTAAAAAATAT+AGG | + | 10975:6088-6107 | MS.gene060315:intron | 10.0% |
| !!! | AGAAAAAAACAATTTTATTT+AGG | + | 10975:6475-6494 | MS.gene060315:intron | 10.0% |
| !!! | ATATTTTTTACATCAATAAT+GGG | - | 10975:6088-6107 | MS.gene060315:intergenic | 10.0% |
| !!! | TATATTTTTTACATCAATAA+TGG | - | 10975:6089-6108 | MS.gene060315:intergenic | 10.0% |
| !! | AATGAAAAGTTATTTATGTT+TGG | - | 10975:3641-3660 | MS.gene060315:intergenic | 15.0% |
| !! | AATGCTTGAAAATATTTATA+GGG | + | 10975:4310-4329 | MS.gene060315:intron | 15.0% |
| !! | ATAAATTAATATATGTGTAG+CGG | - | 10975:6123-6142 | MS.gene060315:intergenic | 15.0% |
| !! | ATGACATTAAATTAAATTAC+AGG | + | 10975:6733-6752 | MS.gene060315:intron | 15.0% |
| !! | TAATGCTTGAAAATATTTAT+AGG | + | 10975:4309-4328 | MS.gene060315:intron | 15.0% |
| !! | TCTATTTATAAATTGCTAAA+AGG | + | 10975:7727-7746 | MS.gene060315:intron | 15.0% |
| !!! | AATTAGTTTCAAACTTTAAA+AGG | - | 10975:3866-3885 | MS.gene060315:intergenic | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+CGG | + | 10975:3319-3338 | MS.gene060315:intron | 15.0% |
| !!! | TCTTTTCAATTGTAAAATAT+GGG | + | 10975:4157-4176 | MS.gene060315:intron | 15.0% |
| !!! | TTCTTTTCAATTGTAAAATA+TGG | + | 10975:4156-4175 | MS.gene060315:intron | 15.0% |
| !! | AAAGATATGAATTAGAAAGA+AGG | - | 10975:2981-3000 | MS.gene060315:intergenic | 20.0% |
| !! | AAGATATGAATTAGAAAGAA+GGG | - | 10975:2980-2999 | MS.gene060315:intergenic | 20.0% |
| !! | ATTTAAAAGATATGCATTGT+CGG | - | 10975:7372-7391 | MS.gene060315:intergenic | 20.0% |
| !! | CATAGTGTATTAGTATAATA+AGG | + | 10975:3365-3384 | MS.gene060315:intron | 20.0% |
| !! | GATAGTAGAAGAATAAATAA+AGG | - | 10975:6250-6269 | MS.gene060315:intergenic | 20.0% |
| !! | TTAAAAATTCACTTTGTATG+CGG | + | 10975:3766-3785 | MS.gene060315:intron | 20.0% |
| !!! | AAATTCATTTTGCAATTTTG+TGG | - | 10975:4233-4252 | MS.gene060315:intergenic | 20.0% |
| !!! | AATATTTGTACAACCATTTT+GGG | + | 10975:4337-4356 | MS.gene060315:intron | 20.0% |
| !!! | ACAAGTTCTAAATGTATTAA+GGG | + | 10975:4541-4560 | MS.gene060315:intron | 20.0% |
| !!! | ACTATATTCTGTCATTTTTT+AGG | + | 10975:3797-3816 | MS.gene060315:intron | 20.0% |
| !!! | ATTATGAGAAGAGTATTATT+TGG | - | 10975:5917-5936 | MS.gene060315:intergenic | 20.0% |
| !!! | CTATATTCTGTCATTTTTTA+GGG | + | 10975:3798-3817 | MS.gene060315:intron | 20.0% |
| !!! | CTCATTTTAATCAATAACTT+AGG | + | 10975:6628-6647 | MS.gene060315:intron | 20.0% |
| !!! | TAATATTTGTACAACCATTT+TGG | + | 10975:4336-4355 | MS.gene060315:intron | 20.0% |
| !!! | TACAAGTTCTAAATGTATTA+AGG | + | 10975:4540-4559 | MS.gene060315:intron | 20.0% |
| !!! | TATATTCTGTCATTTTTTAG+GGG | + | 10975:3799-3818 | MS.gene060315:intron | 20.0% |
| !!! | TATATTTTTGAGTTTTGACA+CGG | + | 10975:4627-4646 | MS.gene060315:intron | 20.0% |
| !!! | TCAATTTAGAATCATTTATG+AGG | - | 10975:3540-3559 | MS.gene060315:intergenic | 20.0% |
| !!! | TGAGAAATTTTGATCAATTA+GGG | - | 10975:6316-6335 | MS.gene060315:intergenic | 20.0% |
| !!! | TTGAGAAATTTTGATCAATT+AGG | - | 10975:6317-6336 | MS.gene060315:intergenic | 20.0% |
| !!! | TTTTATTTTGGTAAAAACGA+GGG | - | 10975:5077-5096 | MS.gene060315:intergenic | 20.0% |
| !!! | TTTTTAGCTGTATATTGATA+AGG | + | 10975:4929-4948 | MS.gene060315:intron | 20.0% |
| ! | AAATGATTCTAAATTGAGCT+TGG | + | 10975:3543-3562 | MS.gene060315:intron | 25.0% |
| ! | AACTCAAAGTTATTTGTAGT+TGG | + | 10975:5214-5233 | MS.gene060315:CDS | 25.0% |
| ! | AAGAAACCAATTAAAGATGA+TGG | - | 10975:6868-6887 | MS.gene060315:intergenic | 25.0% |
| ! | AAGATGCAGTTATTAAAATG+GGG | + | 10975:7295-7314 | MS.gene060315:intron | 25.0% |
| ! | ACATTATCAAACATGATCAA+AGG | - | 10975:7031-7050 | MS.gene060315:intergenic | 25.0% |
| ! | ACGATATAGAATAAACAAAC+TGG | - | 10975:7191-7210 | MS.gene060315:intergenic | 25.0% |
| ! | ACTCAAAGTTATTTGTAGTT+GGG | + | 10975:5215-5234 | MS.gene060315:CDS | 25.0% |
| ! | ATATGATCCAAGTATGAAAT+TGG | - | 10975:5412-5431 | MS.gene060315:intergenic | 25.0% |
| ! | ATATGTAACTCTTGTATCTA+CGG | + | 10975:6340-6359 | MS.gene060315:intron | 25.0% |
| ! | ATCAACATATGCAAAAGAAA+AGG | - | 10975:5636-5655 | MS.gene060315:intergenic | 25.0% |
| ! | ATCCTTACAAATATGTCTTT+AGG | + | 10975:7390-7409 | MS.gene060315:intron | 25.0% |
| ! | ATCTTTATCAGAGAAGAATA+AGG | + | 10975:4059-4078 | MS.gene060315:CDS | 25.0% |
| ! | ATGTTATAGAACTCATTGAA+TGG | + | 10975:4104-4123 | MS.gene060315:intron | 25.0% |
| ! | ATTAGAAAGAAGGGTAATAT+TGG | - | 10975:2971-2990 | MS.gene060315:intergenic | 25.0% |
| ! | CAAATAAGAAATGCTTCATT+CGG | + | 10975:4859-4878 | MS.gene060315:intron | 25.0% |
| ! | CAAGATGCAGTTATTAAAAT+GGG | + | 10975:7294-7313 | MS.gene060315:intron | 25.0% |
| ! | CAGTGTAAAACTAATTACTA+AGG | - | 10975:7228-7247 | MS.gene060315:intergenic | 25.0% |
| ! | GGGTTTAACAATAAATTCAA+TGG | - | 10975:3601-3620 | MS.gene060315:intergenic | 25.0% |
| ! | TAAATAAAGGTCAGATACTA+TGG | - | 10975:6237-6256 | MS.gene060315:intergenic | 25.0% |
| ! | TCAAGATGCAGTTATTAAAA+TGG | + | 10975:7293-7312 | MS.gene060315:intron | 25.0% |
| ! | TGGATATATTCATGTAAACA+GGG | - | 10975:3621-3640 | MS.gene060315:intergenic | 25.0% |
| ! | TGTAAAACTAATTACTAAGG+TGG | - | 10975:7225-7244 | MS.gene060315:intergenic | 25.0% |
| ! | TTACTTTCAGATTGAAACAA+AGG | + | 10975:3039-3058 | MS.gene060315:intron | 25.0% |
| ! | TTATGGAAAGCTTAAAAATC+TGG | + | 10975:7929-7948 | MS.gene060315:CDS | 25.0% |
| ! | TTGGATATATTCATGTAAAC+AGG | - | 10975:3622-3641 | MS.gene060315:intergenic | 25.0% |
| ! | TTTCCTATAATGTCATTACT+AGG | + | 10975:7434-7453 | MS.gene060315:intron | 25.0% |
| !! | AAACATTTTTCTATCTCTCT+TGG | - | 10975:6375-6394 | MS.gene060315:intergenic | 25.0% |
| !! | AGTAATATTTGCAGAGTTTT+GGG | + | 10975:3725-3744 | MS.gene060315:intron | 25.0% |
| !! | GTTATTGATTAAAATGAGAG+AGG | - | 10975:6626-6645 | MS.gene060315:intergenic | 25.0% |
| !!! | AACAATTTTATTTAGGACAC+CGG | + | 10975:6482-6501 | MS.gene060315:intron | 25.0% |
| !!! | AACCTTTTTTTCTCTTCTTT+TGG | - | 10975:4466-4485 | MS.gene060315:intergenic | 25.0% |
| !!! | ACCTTTTTTTCTCTTCTTTT+GGG | - | 10975:4465-4484 | MS.gene060315:intergenic | 25.0% |
| !!! | AGAAATTTTGATCAATTAGG+GGG | - | 10975:6314-6333 | MS.gene060315:intergenic | 25.0% |
| !!! | ATATCTTGCTATTTCAATGT+GGG | + | 10975:3393-3412 | MS.gene060315:intron | 25.0% |
| !!! | CATACTCATCAGTTTTATTT+TGG | - | 10975:5089-5108 | MS.gene060315:intergenic | 25.0% |
| !!! | GAGAAATTTTGATCAATTAG+GGG | - | 10975:6315-6334 | MS.gene060315:intergenic | 25.0% |
| !!! | GTTTTATTTTGGTAAAAACG+AGG | - | 10975:5078-5097 | MS.gene060315:intergenic | 25.0% |
| !!! | TGTTTCTAAAATGTAAGCTA+TGG | - | 10975:5299-5318 | MS.gene060315:intergenic | 25.0% |
| !!! | TTTATTTTGGTAAAAACGAG+GGG | - | 10975:5076-5095 | MS.gene060315:intergenic | 25.0% |
| !!! | TTTCTGTTTTTCTTGCTAAT+TGG | + | 10975:2998-3017 | MS.gene060315:intron | 25.0% |
| !!! | TTTTACTGTGTTATTTGCTT+TGG | + | 10975:7773-7792 | MS.gene060315:intron | 25.0% |
| AAAACAATAGAGAGAGAAAG+AGG | - | 10975:4439-4458 | MS.gene060314:intergenic | 30.0% | |
| AAACAATAGAGAGAGAAAGA+GGG | - | 10975:4438-4457 | MS.gene060314:intergenic | 30.0% | |
| AAACATCTTATCCATCTTAG+GGG | + | 10975:5314-5333 | MS.gene060315:intron | 30.0% | |
| AAATACACCAGAACAATCAT+TGG | + | 10975:3960-3979 | MS.gene060315:CDS | 30.0% | |
| AAGAGAAAAAGAAACTACAG+CGG | - | 10975:7493-7512 | MS.gene060315:intergenic | 30.0% | |
| AATACACCAGAACAATCATT+GGG | + | 10975:3961-3980 | MS.gene060315:CDS | 30.0% | |
| ACATAAGGAAATCAAGAGAT+TGG | - | 10975:5727-5746 | MS.gene060315:intergenic | 30.0% | |
| ACCTCATTTCTATTAGCAAA+TGG | - | 10975:4576-4595 | MS.gene060315:intergenic | 30.0% | |
| ACTTATGATGATCTCGAAAA+GGG | + | 10975:4823-4842 | MS.gene060315:intron | 30.0% | |
| ACTTGAAGAAACTGATGATA+GGG | - | 10975:8175-8194 | MS.gene060315:intergenic | 30.0% | |
| AGAAACATCTTATCCATCTT+AGG | + | 10975:5312-5331 | MS.gene060315:intron | 30.0% | |
| AGTAAGTAGTAACCATGAAT+AGG | - | 10975:3179-3198 | MS.gene060315:intergenic | 30.0% | |
| AGTACTTCTTATAAGATCAG+AGG | - | 10975:4806-4825 | MS.gene060315:intergenic | 30.0% | |
| ATAGAGTTTAAAAGACAGTC+TGG | - | 10975:7712-7731 | MS.gene060315:intergenic | 30.0% | |
| ATCAGTTTCTTCAAGTCAAT+GGG | + | 10975:8179-8198 | MS.gene060315:CDS | 30.0% | |
| ATCATACACAAAATGAAAGC+TGG | - | 10975:7803-7822 | MS.gene060315:intergenic | 30.0% | |
| ATGTGAAAAGGATGATTTAC+AGG | - | 10975:5262-5281 | MS.gene060315:intergenic | 30.0% | |
| ATTATTTGATCTTGAGCAGT+TGG | + | 10975:4894-4913 | MS.gene060315:intron | 30.0% | |
| CAAAACTCTGCAAATATTAC+TGG | - | 10975:3726-3745 | MS.gene060315:intergenic | 30.0% | |
| CAAAAGAAAAGGAGAAAAAC+AGG | - | 10975:5625-5644 | MS.gene060315:intergenic | 30.0% | |
| CAAAGAAGTAATGCTTCATT+CGG | + | 10975:4764-4783 | MS.gene060315:intron | 30.0% | |
| CAATGAGTTCTATAACATGA+AGG | - | 10975:4102-4121 | MS.gene060315:intergenic | 30.0% | |
| CATCATCAACCAGTAATTAA+TGG | - | 10975:7626-7645 | MS.gene060315:intergenic | 30.0% | |
| CATGTTCCATCATCTTTAAT+TGG | + | 10975:6859-6878 | MS.gene060315:intron | 30.0% | |
| CTCCTAAAGACATATTTGTA+AGG | - | 10975:7395-7414 | MS.gene060315:intergenic | 30.0% | |
| CTGATAAAGATTTATGTCCA+TGG | - | 10975:4050-4069 | MS.gene060315:intergenic | 30.0% | |
| CTTAAAAATCTGGTAGAGTA+TGG | + | 10975:7939-7958 | MS.gene060315:CDS | 30.0% | |
| GAAACATCTTATCCATCTTA+GGG | + | 10975:5313-5332 | MS.gene060315:intron | 30.0% | |
| GAATAAACAAACTGGTACTA+AGG | - | 10975:7183-7202 | MS.gene060315:intergenic | 30.0% | |
| GATCAAAGGTAAATTTGTGA+TGG | - | 10975:7017-7036 | MS.gene060315:intergenic | 30.0% | |
| GTACCTAGTAATGACATTAT+AGG | - | 10975:7440-7459 | MS.gene060315:intergenic | 30.0% | |
| GTGGTTTATCTTGAAAACTA+TGG | + | 10975:8101-8120 | MS.gene060315:CDS | 30.0% | |
| TAACTGCATCTTGAAATTGA+CGG | - | 10975:7287-7306 | MS.gene060315:intergenic | 30.0% | |
| TACTTATGATGATCTCGAAA+AGG | + | 10975:4822-4841 | MS.gene060315:intron | 30.0% | |
| TAGAACCAAACATACACTAA+AGG | - | 10975:3445-3464 | MS.gene060315:intergenic | 30.0% | |
| TAGCAATTGCCATTAATTAC+TGG | + | 10975:7614-7633 | MS.gene060315:intron | 30.0% | |
| TATGTATGTCTGTGTTTAGA+AGG | + | 10975:5815-5834 | MS.gene060315:intron | 30.0% | |
| TCAACAACTAAACTTTCATG+TGG | + | 10975:4286-4305 | MS.gene060315:intron | 30.0% | |
| TCCCAAAAGAAGAGAAAAAA+AGG | + | 10975:4461-4480 | MS.gene060315:intron | 30.0% | |
| TTCATCAGCTGAATTTCAAA+AGG | + | 10975:5581-5600 | MS.gene060315:CDS | 30.0% | |
| TTGATTAAAATGAGAGAGGA+AGG | - | 10975:6622-6641 | MS.gene060315:intergenic | 30.0% | |
| TTTCAGATTGAAACAAAGGA+TGG | + | 10975:3043-3062 | MS.gene060315:intron | 30.0% | |
| ! | AAGGTTTTTGAATCATGCTT+AGG | - | 10975:6603-6622 | MS.gene060315:intergenic | 30.0% |
| ! | ACTTTTCTATACATAGCCAA+GGG | + | 10975:4203-4222 | MS.gene060315:intron | 30.0% |
| ! | AGCTTTCATTTTGTGTATGA+TGG | + | 10975:7802-7821 | MS.gene060315:intron | 30.0% |
| ! | CAATAACTTAGGAATCCTTT+TGG | + | 10975:6639-6658 | MS.gene060315:intron | 30.0% |
| ! | CAGTAATATTTGCAGAGTTT+TGG | + | 10975:3724-3743 | MS.gene060315:intron | 30.0% |
| ! | CTAAAAGGACATTTGAAGTT+TGG | + | 10975:7742-7761 | MS.gene060315:intron | 30.0% |
| ! | TACAAATATGTCTTTAGGAG+AGG | + | 10975:7395-7414 | MS.gene060315:intron | 30.0% |
| ! | TACTTTTCTATACATAGCCA+AGG | + | 10975:4202-4221 | MS.gene060315:intron | 30.0% |
| ! | TCAACCTTTTCTACTATATC+CGG | - | 10975:5370-5389 | MS.gene060315:intergenic | 30.0% |
| ! | TTAACTCATTTTCAGCGATT+GGG | + | 10975:5698-5717 | MS.gene060315:intron | 30.0% |
| ! | TTATGCCATTTGATACAATC+AGG | + | 10975:3918-3937 | MS.gene060315:intron | 30.0% |
| ! | TTTTCCATTCTTAGTACCAA+AGG | - | 10975:5442-5461 | MS.gene060315:intergenic | 30.0% |
| !! | AACTTGTTGAAAACATTCAG+AGG | - | 10975:4655-4674 | MS.gene060315:intergenic | 30.0% |
| !! | AGCTATTTTGTGACAACTTT+TGG | - | 10975:4492-4511 | MS.gene060315:intergenic | 30.0% |
| !! | CAATTAAAGATGATGGAACA+TGG | - | 10975:6861-6880 | MS.gene060315:intergenic | 30.0% |
| !! | CTTGCTATTATTCTTGTCAA+TGG | + | 10975:7843-7862 | MS.gene060315:intron | 30.0% |
| !! | GAATTTGTTATTGACCTGTT+TGG | + | 10975:3500-3519 | MS.gene060315:intron | 30.0% |
| !! | GAGAAGAGTATTATTTGGAT+TGG | - | 10975:5912-5931 | MS.gene060315:intergenic | 30.0% |
| !! | GATATCTTGCTATTTCAATG+TGG | + | 10975:3392-3411 | MS.gene060315:intron | 30.0% |
| !! | GCTATTTTGTGACAACTTTT+GGG | - | 10975:4491-4510 | MS.gene060315:intergenic | 30.0% |
| !! | TTGATGATGAATCAGCATAT+GGG | + | 10975:7637-7656 | MS.gene060315:intron | 30.0% |
| !! | TTTTCAGCACTAGTTTGAAA+AGG | + | 10975:4727-4746 | MS.gene060315:intron | 30.0% |
| !!! | TGTATGTTTGGTTCTACTTT+TGG | + | 10975:3449-3468 | MS.gene060315:intron | 30.0% |
| AAACAGGACAGAATGAAAAC+TGG | - | 10975:5609-5628 | MS.gene060314:intergenic | 35.0% | |
| AACAATAGAGAGAGAAAGAG+GGG | - | 10975:4437-4456 | MS.gene060315:intergenic | 35.0% | |
| AAGCTTTCCATAATCGTACT+TGG | - | 10975:7922-7941 | MS.gene060315:intergenic | 35.0% | |
| AATACCACATATTCAGAGCA+AGG | - | 10975:2925-2944 | MS.gene060315:intergenic | 35.0% | |
| AATGCTGGTAGAATGTGAAA+AGG | - | 10975:5274-5293 | MS.gene060315:intergenic | 35.0% | |
| ACAAAGGATGGTTTCTTGTT+AGG | + | 10975:3055-3074 | MS.gene060315:CDS | 35.0% | |
| ACAGTCTGGTGGAAATAATT+AGG | - | 10975:7698-7717 | MS.gene060315:intergenic | 35.0% | |
| ACTTAGACGAGTATCACATA+AGG | - | 10975:5742-5761 | MS.gene060315:intergenic | 35.0% | |
| AGCTTCCTTTAGTGTATGTT+TGG | + | 10975:3437-3456 | MS.gene060315:intron | 35.0% | |
| ATACCACATATTCAGAGCAA+GGG | - | 10975:2924-2943 | MS.gene060315:intergenic | 35.0% | |
| ATCAACAAAGGCAATGATCT+GGG | - | 10975:8002-8021 | MS.gene060315:intergenic | 35.0% | |
| ATGTAAGCTATGGAAAATGC+TGG | - | 10975:5289-5308 | MS.gene060315:intergenic | 35.0% | |
| ATTGACCTGTTTGGATGTAT+TGG | + | 10975:3509-3528 | MS.gene060315:intron | 35.0% | |
| ATTGCCATACTCTTATCCTT+CGG | + | 10975:2811-2830 | MS.gene060315:CDS | 35.0% | |
| CAAAACCAATACATCCAAAC+AGG | - | 10975:3517-3536 | MS.gene060315:intergenic | 35.0% | |
| CATCAGTTTCTTCAAGTCAA+TGG | + | 10975:8178-8197 | MS.gene060315:CDS | 35.0% | |
| GAAAAATAGAGACCTCTCAT+TGG | - | 10975:7255-7274 | MS.gene060315:intergenic | 35.0% | |
| GAAATAATTGTCCCCTAAGA+TGG | - | 10975:5328-5347 | MS.gene060315:intergenic | 35.0% | |
| GACTTGAAGAAACTGATGAT+AGG | - | 10975:8176-8195 | MS.gene060315:intergenic | 35.0% | |
| GGGAAGTAATAATGTTCAGT+GGG | + | 10975:7110-7129 | MS.gene060315:intron | 35.0% | |
| GTTCAGATGATTGCTACAAT+GGG | + | 10975:5556-5575 | MS.gene060315:intron | 35.0% | |
| TAATATATGTGTAGCGGTGA+TGG | - | 10975:6117-6136 | MS.gene060315:intergenic | 35.0% | |
| TCAACCGGATATAGTAGAAA+AGG | + | 10975:5363-5382 | MS.gene060315:CDS | 35.0% | |
| TCAGTTTCTTCAAGTCAATG+GGG | + | 10975:8180-8199 | MS.gene060315:CDS | 35.0% | |
| TCTCAAAAGTTGTCCCAAAA+TGG | - | 10975:4353-4372 | MS.gene060315:intergenic | 35.0% | |
| TCTGTCTCCAATTTCATACT+TGG | + | 10975:5402-5421 | MS.gene060315:CDS | 35.0% | |
| TGACTAGAATTCTTCGACAA+TGG | - | 10975:4984-5003 | MS.gene060315:intergenic | 35.0% | |
| TGGCATTCATGAAAGACAAA+AGG | - | 10975:5941-5960 | MS.gene060315:intergenic | 35.0% | |
| TGTTCAGATGATTGCTACAA+TGG | + | 10975:5555-5574 | MS.gene060315:intron | 35.0% | |
| TTGAAATTGACGGAATGACA+TGG | - | 10975:7277-7296 | MS.gene060315:intergenic | 35.0% | |
| TTTGCTAAGCTGGAAATACA+TGG | - | 10975:5659-5678 | MS.gene060315:intergenic | 35.0% | |
| ! | AAATATGTCTTTAGGAGAGG+AGG | + | 10975:7398-7417 | MS.gene060315:intron | 35.0% |
| ! | CTTAACTCATTTTCAGCGAT+TGG | + | 10975:5697-5716 | MS.gene060315:intron | 35.0% |
| ! | GCCATTTGCTAATAGAAATG+AGG | + | 10975:4572-4591 | MS.gene060315:intron | 35.0% |
| ! | GCTGTAGTTTCTTTTTCTCT+TGG | + | 10975:7492-7511 | MS.gene060315:intron | 35.0% |
| ! | TACATAATTGATTCTCGAGG+TGG | + | 10975:3476-3495 | MS.gene060315:intron | 35.0% |
| ! | TCCAGCTTAGCAAATTTTCA+CGG | + | 10975:5665-5684 | MS.gene060315:intron | 35.0% |
| ! | TGACTTTTCTGACTATTCAC+TGG | + | 10975:6906-6925 | MS.gene060315:intron | 35.0% |
| ! | TGTCCTTTTGTAGCACTTTT+GGG | + | 10975:5123-5142 | MS.gene060315:intron | 35.0% |
| ! | TTGTCCTTTTGTAGCACTTT+TGG | + | 10975:5122-5141 | MS.gene060315:intron | 35.0% |
| !! | AATCCCAAAAGTGCTACAAA+AGG | - | 10975:5129-5148 | MS.gene060315:intergenic | 35.0% |
| !! | GAAAAGGTGGTTCAAGTTTT+TGG | - | 10975:6827-6846 | MS.gene060315:intergenic | 35.0% |
| !! | GGATCAAGGTTTTGATGTTT+GGG | + | 10975:3996-4015 | MS.gene060315:CDS | 35.0% |
| !! | GTTGATGATGAATCAGCATA+TGG | + | 10975:7636-7655 | MS.gene060315:intron | 35.0% |
| !! | TTCAAGTTTTTGGAGGATGA+TGG | - | 10975:6817-6836 | MS.gene060315:intergenic | 35.0% |
| !! | TTTTCAAGATAAACCACCTC+AGG | - | 10975:8098-8117 | MS.gene060315:intergenic | 35.0% |
| !!! | ATGTTTGGTTCTACTTTTGG+AGG | + | 10975:3452-3471 | MS.gene060315:intron | 35.0% |
| !!! | TGTTTGGTTCTACTTTTGGA+GGG | + | 10975:3453-3472 | MS.gene060315:intron | 35.0% |
| !!! | TTTTGGGACAGTGTTTGAAT+TGG | + | 10975:3741-3760 | MS.gene060315:intron | 35.0% |
| !!! | TTTTGTAGCACTTTTGGGAT+TGG | + | 10975:5128-5147 | MS.gene060315:intron | 35.0% |
| ACCTGCCTGATTGTATCAAA+TGG | - | 10975:3926-3945 | MS.gene060315:intergenic | 40.0% | |
| ACCTTCTCCAAGTACGATTA+TGG | + | 10975:7912-7931 | MS.gene060315:CDS | 40.0% | |
| AGCCAGCAAAGTAATTGCAA+TGG | - | 10975:5961-5980 | MS.gene060315:intergenic | 40.0% | |
| ATACACGCAGAATGACCAAA+AGG | - | 10975:6657-6676 | MS.gene060315:intergenic | 40.0% | |
| ATGAAGCACATACACACACA+TGG | - | 10975:3348-3367 | MS.gene060315:intergenic | 40.0% | |
| ATGAAGCCCAATGATTGTTC+TGG | - | 10975:3970-3989 | MS.gene060315:intergenic | 40.0% | |
| ATGAGTTCATCACAGAGAGT+TGG | - | 10975:2886-2905 | MS.gene060315:intergenic | 40.0% | |
| ATGATGAATCAGCATATGGG+TGG | + | 10975:7640-7659 | MS.gene060315:intron | 40.0% | |
| ATGGAACATGGAACATACTC+TGG | - | 10975:6849-6868 | MS.gene060315:intergenic | 40.0% | |
| ATGGCTCGTATGAGTGTTAT+AGG | + | 10975:6420-6439 | MS.gene060315:intron | 40.0% | |
| ATTTGTAGTTGGGCATTCAC+AGG | + | 10975:5225-5244 | MS.gene060315:CDS | 40.0% | |
| CAGATCATTGCCTTTGTTGA+TGG | + | 10975:8001-8020 | MS.gene060315:CDS | 40.0% | |
| CATCAACAAAGGCAATGATC+TGG | - | 10975:8003-8022 | MS.gene060315:intergenic | 40.0% | |
| CGTATGAGTGTTATAGGTGT+CGG | + | 10975:6426-6445 | MS.gene060315:intron | 40.0% | |
| CTTAGGCAAGTTATGAAGCA+CGG | - | 10975:6586-6605 | MS.gene060315:intergenic | 40.0% | |
| CTTCGTACAAATATGCTCCT+TGG | - | 10975:7581-7600 | MS.gene060315:intergenic | 40.0% | |
| GAGTTTAAAAGACAGTCTGG+TGG | - | 10975:7709-7728 | MS.gene060315:intergenic | 40.0% | |
| GATTCCGAAGGATAAGAGTA+TGG | - | 10975:2818-2837 | MS.gene060315:intergenic | 40.0% | |
| GCTCAAAAACAACAACAACG+AGG | + | 10975:3129-3148 | MS.gene060315:intron | 40.0% | |
| GGAAAAGATGCACATTGATC+AGG | + | 10975:5456-5475 | MS.gene060315:CDS | 40.0% | |
| GGATCATATTAGTGCACCTT+TGG | + | 10975:5423-5442 | MS.gene060315:CDS | 40.0% | |
| GGGGAAGTAATAATGTTCAG+TGG | + | 10975:7109-7128 | MS.gene060315:intron | 40.0% | |
| TACTATATCCGGTTGAGTGA+AGG | - | 10975:5359-5378 | MS.gene060315:intergenic | 40.0% | |
| TAGTAACCATGAATAGGCCA+TGG | - | 10975:3173-3192 | MS.gene060315:intergenic | 40.0% | |
| TCCATAATCGTACTTGGAGA+AGG | - | 10975:7916-7935 | MS.gene060315:intergenic | 40.0% | |
| TGACATGCTTTATCTTGCCA+AGG | + | 10975:7561-7580 | MS.gene060315:intron | 40.0% | |
| TGAGAGACATGAACCTGTAA+TGG | - | 10975:5784-5803 | MS.gene060315:intergenic | 40.0% | |
| TGCACCTTTGGTACTAAGAA+TGG | + | 10975:5435-5454 | MS.gene060315:CDS | 40.0% | |
| TGCCATTGCAATTACTTTGC+TGG | + | 10975:5956-5975 | MS.gene060315:intron | 40.0% | |
| TTACACTGACATCCAATGAG+AGG | + | 10975:7240-7259 | MS.gene060315:intron | 40.0% | |
| TTTGTCTGAGTTGTCTGACA+TGG | + | 10975:6401-6420 | MS.gene060315:intron | 40.0% | |
| ! | ACAGAGAGTTGGTTGTTGTT+TGG | - | 10975:2875-2894 | MS.gene060315:intergenic | 40.0% |
| ! | ACGTCTTCTATCAGAAGTGT+CGG | - | 10975:3256-3275 | MS.gene060315:intergenic | 40.0% |
| ! | ATACGATGTGACTTGTGCTT+TGG | + | 10975:5050-5069 | MS.gene060315:intron | 40.0% |
| ! | ATGCGGCTAAGGTCAAATTT+TGG | - | 10975:7978-7997 | MS.gene060315:intergenic | 40.0% |
| ! | CAGCTTAGCAAATTTTCACG+GGG | + | 10975:5667-5686 | MS.gene060315:intron | 40.0% |
| ! | CATGGAACATACTCTGGAAA+AGG | - | 10975:6843-6862 | MS.gene060315:intergenic | 40.0% |
| ! | CCAGCTTAGCAAATTTTCAC+GGG | + | 10975:5666-5685 | MS.gene060315:intron | 40.0% |
| ! | GGGTACATAATTGATTCTCG+AGG | + | 10975:3473-3492 | MS.gene060315:intron | 40.0% |
| ! | TTACCCTTGCTCTGAATATG+TGG | + | 10975:2918-2937 | MS.gene060315:CDS | 40.0% |
| !! | AAGGTGGTTCAAGTTTTTGG+AGG | - | 10975:6824-6843 | MS.gene060315:intergenic | 40.0% |
| !! | AGAGAGTTGGTTGTTGTTTG+GGG | - | 10975:2873-2892 | MS.gene060315:intergenic | 40.0% |
| !! | CAAGGTTTTGATGTTTGGGT+AGG | + | 10975:4000-4019 | MS.gene060315:CDS | 40.0% |
| !! | CAGAGAGTTGGTTGTTGTTT+GGG | - | 10975:2874-2893 | MS.gene060315:intergenic | 40.0% |
| !! | CGGATCAAGGTTTTGATGTT+TGG | + | 10975:3995-4014 | MS.gene060315:CDS | 40.0% |
| !! | CTGGCTTTATCTGAACACAT+TGG | + | 10975:5975-5994 | MS.gene060315:intron | 40.0% |
| !! | TGCCTTTGTTGATGGCTTAT+GGG | + | 10975:8009-8028 | MS.gene060315:CDS | 40.0% |
| !! | TTGCCTTTGTTGATGGCTTA+TGG | + | 10975:8008-8027 | MS.gene060315:CDS | 40.0% |
| !!! | CTGTCATTTTTTAGGGGAAG+TGG | + | 10975:3805-3824 | MS.gene060315:intron | 40.0% |
| !!! | TTTTTGGAGGATGATGGATG+AGG | - | 10975:6811-6830 | MS.gene060315:intergenic | 40.0% |
| AAGATAAACCACCTCAGGTG+TGG | - | 10975:8093-8112 | MS.gene060315:intergenic | 45.0% | |
| AAGGCAATGATCTGGGTATG+CGG | - | 10975:7995-8014 | MS.gene060315:intergenic | 45.0% | |
| AATCAGCATATGGGTGGAAG+TGG | + | 10975:7646-7665 | MS.gene060315:intron | 45.0% | |
| ATCATTGGGCTTCATCCTTG+CGG | + | 10975:3975-3994 | MS.gene060315:CDS | 45.0% | |
| ATTAGCCCTGTACGATCTTG+CGG | + | 10975:5162-5181 | MS.gene060315:CDS | 45.0% | |
| CATCAAAACCTTGATCCGCA+AGG | - | 10975:3993-4012 | MS.gene060315:intergenic | 45.0% | |
| CATTTCCGCAAGATCGTACA+GGG | - | 10975:5170-5189 | MS.gene060315:intergenic | 45.0% | |
| CGCACAATTCAGATCAGAGA+GGG | - | 10975:6059-6078 | MS.gene060315:intergenic | 45.0% | |
| CTCGAAAAGGGAGAACAGAA+TGG | + | 10975:4835-4854 | MS.gene060315:intron | 45.0% | |
| CTTCTGATAGAAGACGTGTC+TGG | + | 10975:3259-3278 | MS.gene060315:intron | 45.0% | |
| GACATGCTGTCATCCATTAC+AGG | + | 10975:5768-5787 | MS.gene060315:CDS | 45.0% | |
| GCCATTTGATACAATCAGGC+AGG | + | 10975:3922-3941 | MS.gene060315:intron | 45.0% | |
| GGATCACTGGAGAACATATG+AGG | - | 10975:7884-7903 | MS.gene060315:intergenic | 45.0% | |
| TCATTTCCGCAAGATCGTAC+AGG | - | 10975:5171-5190 | MS.gene060315:intergenic | 45.0% | |
| TGATTTCCAGCACACACTCA+AGG | + | 10975:8058-8077 | MS.gene060315:CDS | 45.0% | |
| TTACTTCGACACTCCTAGAC+CGG | - | 10975:6455-6474 | MS.gene060315:intergenic | 45.0% | |
| ! | CGGCTAAGGTCAAATTTTGG+TGG | - | 10975:7975-7994 | MS.gene060315:intergenic | 45.0% |
| ! | GCAATTTTGTGGAACACCCT+TGG | - | 10975:4222-4241 | MS.gene060315:intergenic | 45.0% |
| ! | GGAACATACTCTGGAAAAGG+TGG | - | 10975:6840-6859 | MS.gene060315:intergenic | 45.0% |
| ! | TTTTGCTGCCTTCACTCAAC+CGG | + | 10975:5348-5367 | MS.gene060315:CDS | 45.0% |
| !! | ACTTGGAGAAGGTACCTTTG+CGG | - | 10975:7905-7924 | MS.gene060315:intergenic | 45.0% |
| !! | AGAGTTGGTTGTTGTTTGGG+GGG | - | 10975:2871-2890 | MS.gene060315:intergenic | 45.0% |
| !! | CCCGTGAAAATTTGCTAAGC+TGG | - | 10975:5669-5688 | MS.gene060315:intergenic | 45.0% |
| !! | CCTTTGTTGATGGCTTATGG+GGG | + | 10975:8011-8030 | MS.gene060315:CDS | 45.0% |
| !! | GAGAGTTGGTTGTTGTTTGG+GGG | - | 10975:2872-2891 | MS.gene060315:intergenic | 45.0% |
| !! | GCCTTTGTTGATGGCTTATG+GGG | + | 10975:8010-8029 | MS.gene060315:CDS | 45.0% |
| !! | GCGCTGTTTTCAATTAGCAG+TGG | + | 10975:6928-6947 | MS.gene060315:intron | 45.0% |
| !! | GTGTTATAGGTGTCGGATAC+CGG | + | 10975:6433-6452 | MS.gene060315:intron | 45.0% |
| !! | TATATTAATTTATTTATAGA+CGG | + | 10975:6130-6149 | MS.gene060315:intron | 5.0% |
| ACAACAACAACGAGGTCCTC+CGG | + | 10975:3137-3156 | MS.gene060315:intron | 50.0% | |
| ACAATCAGGCAGGTGATGCA+TGG | + | 10975:3932-3951 | MS.gene060315:intron | 50.0% | |
| ACGTGTCGGACAACTAAGAC+CGG | - | 10975:6504-6523 | MS.gene060315:intergenic | 50.0% | |
| ATCATCGCTCACTCCTTCGA+CGG | + | 10975:2835-2854 | MS.gene060315:CDS | 50.0% | |
| ATGATCTGGGTATGCGGCTA+AGG | - | 10975:7989-8008 | MS.gene060315:intergenic | 50.0% | |
| CCCCCATAAGCCATCAACAA+AGG | - | 10975:8014-8033 | MS.gene060315:intergenic | 50.0% | |
| GAAATGTGCGTGGAACACGT+TGG | + | 10975:4022-4041 | MS.gene060315:CDS | 50.0% | |
| GATGAACTCATTCTTCCCGC+TGG | + | 10975:2895-2914 | MS.gene060315:CDS | 50.0% | |
| GCGCACAATTCAGATCAGAG+AGG | - | 10975:6060-6079 | MS.gene060315:intergenic | 50.0% | |
| GCTTCTCCATGGCCTATTCA+TGG | + | 10975:3164-3183 | MS.gene060315:CDS | 50.0% | |
| GTTTGGGTAGGAAATGTGCG+TGG | + | 10975:4012-4031 | MS.gene060315:CDS | 50.0% | |
| TAAACCACCTCAGGTGTGGA+TGG | - | 10975:8089-8108 | MS.gene060315:intergenic | 50.0% | |
| TATGAAGCACGGACACCTCT+AGG | - | 10975:6575-6594 | MS.gene060315:intergenic | 50.0% | |
| TCAGATCAGAGAGGGTGAGT+AGG | - | 10975:6051-6070 | MS.gene060315:intergenic | 50.0% | |
| TGTTCTCCAGTGATCCGCAA+AGG | + | 10975:7888-7907 | MS.gene060315:intron | 50.0% | |
| TTCAGAGCAAGGGTAACCAG+CGG | - | 10975:2914-2933 | MS.gene060315:intergenic | 50.0% | |
| ! | AAGGTACCTTTGCGGATCAC+TGG | - | 10975:7897-7916 | MS.gene060315:intergenic | 50.0% |
| !!! | AGCACTTTTGGGATTGGAGC+TGG | + | 10975:5134-5153 | MS.gene060315:intron | 50.0% |
| ACGTGTCGTACGAGTGTCCA+TGG | + | 10975:6520-6539 | MS.gene060315:intron | 55.0% | |
| ACTTTGTAGGGACGGGGGTT+GGG | + | 10975:7088-7107 | MS.gene060315:intron | 55.0% | |
| AGGCCATGGAGAAGCAGAAC+CGG | - | 10975:3159-3178 | MS.gene060315:intergenic | 55.0% | |
| CGTGTCGTACGAGTGTCCAT+GGG | + | 10975:6521-6540 | MS.gene060315:intron | 55.0% | |
| GACACTCGTACGACACGTGT+CGG | - | 10975:6518-6537 | MS.gene060315:intergenic | 55.0% | |
| GCAGTTCCTTGAGTGTGTGC+TGG | - | 10975:8067-8086 | MS.gene060315:intergenic | 55.0% | |
| GGAGTGAGCGATGATTCCGA+AGG | - | 10975:2830-2849 | MS.gene060315:intergenic | 55.0% | |
| GGCTTCATCCTTGCGGATCA+AGG | + | 10975:3982-4001 | MS.gene060315:CDS | 55.0% | |
| TCAGAGCAAGGGTAACCAGC+GGG | - | 10975:2913-2932 | MS.gene060315:intergenic | 55.0% | |
| TTGCTTCAACGAGTCACGCG+TGG | + | 10975:6765-6784 | MS.gene060315:CDS | 55.0% | |
| ! | TCTAGGACTAGACGTGTCCG+CGG | - | 10975:6558-6577 | MS.gene060315:intergenic | 55.0% |
| !! | TAGGTGTCGGATACCGGTCT+AGG | + | 10975:6439-6458 | MS.gene060315:intron | 55.0% |
| ACTGCCATCCACACCTGAGG+TGG | + | 10975:8082-8101 | MS.gene060315:CDS | 60.0% | |
| ATCGCTCACTCCTTCGACGG+CGG | + | 10975:2838-2857 | MS.gene060315:CDS | 60.0% | |
| CCATGGAGAAGCAGAACCGG+AGG | - | 10975:3156-3175 | MS.gene060315:intergenic | 60.0% | |
| CCTCCGGTTCTGCTTCTCCA+TGG | + | 10975:3153-3172 | MS.gene060315:CDS | 60.0% | |
| CGTGGAACACGTTGGAGCCA+TGG | + | 10975:4030-4049 | MS.gene060315:CDS | 60.0% | |
| CTTTGTAGGGACGGGGGTTG+GGG | + | 10975:7089-7108 | MS.gene060315:intron | 60.0% | |
| GACTTTGTAGGGACGGGGGT+TGG | + | 10975:7087-7106 | MS.gene060315:intron | 60.0% | |
| GCGGACACGTCTAGTCCTAG+AGG | + | 10975:6557-6576 | MS.gene060315:intron | 60.0% | |
| GGAACTGCCATCCACACCTG+AGG | + | 10975:8079-8098 | MS.gene060315:CDS | 60.0% | |
| TTTGTAGGGACGGGGGTTGG+GGG | + | 10975:7090-7109 | MS.gene060315:intron | 60.0% | |
| ! | ACGAGTGTCCATGGGAGTGC+CGG | + | 10975:6529-6548 | MS.gene060315:intron | 60.0% |
| CTAGACGTGTCCGCGGTGTC+CGG | - | 10975:6551-6570 | MS.gene060315:intergenic | 65.0% | |
| !! | CATGGGAGTGCCGGACACCG+CGG | + | 10975:6538-6557 | MS.gene060315:intron | 70.0% |
| CGCGGTGTCCGGCACTCCCA+TGG | - | 10975:6540-6559 | MS.gene060315:intergenic | 75.0% | |
| ! | GGGTGCGCTGCCGCCGTCGA+AGG | - | 10975:2851-2870 | MS.gene060315:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10975 | gene | 2787 | 8220 | 2787 | ID=MS.gene060315 |
| 10975 | mRNA | 2787 | 8220 | 2787 | ID=MS.gene060315.t1;Parent=MS.gene060315 |
| 10975 | exon | 2787 | 2939 | 2787 | ID=MS.gene060315.t1.exon1;Parent=MS.gene060315.t1 |
| 10975 | CDS | 2787 | 2939 | 2787 | ID=cds.MS.gene060315.t1;Parent=MS.gene060315.t1 |
| 10975 | exon | 3049 | 3112 | 3049 | ID=MS.gene060315.t1.exon2;Parent=MS.gene060315.t1 |
| 10975 | CDS | 3049 | 3112 | 3049 | ID=cds.MS.gene060315.t1;Parent=MS.gene060315.t1 |
| 10975 | exon | 3151 | 3185 | 3151 | ID=MS.gene060315.t1.exon3;Parent=MS.gene060315.t1 |
| 10975 | CDS | 3151 | 3185 | 3151 | ID=cds.MS.gene060315.t1;Parent=MS.gene060315.t1 |
| 10975 | exon | 3940 | 4080 | 3940 | ID=MS.gene060315.t1.exon4;Parent=MS.gene060315.t1 |
| 10975 | CDS | 3940 | 4080 | 3940 | ID=cds.MS.gene060315.t1;Parent=MS.gene060315.t1 |
| 10975 | exon | 5136 | 5246 | 5136 | ID=MS.gene060315.t1.exon5;Parent=MS.gene060315.t1 |
| 10975 | CDS | 5136 | 5246 | 5136 | ID=cds.MS.gene060315.t1;Parent=MS.gene060315.t1 |
| 10975 | exon | 5334 | 5477 | 5334 | ID=MS.gene060315.t1.exon6;Parent=MS.gene060315.t1 |
| 10975 | CDS | 5334 | 5477 | 5334 | ID=cds.MS.gene060315.t1;Parent=MS.gene060315.t1 |
| 10975 | exon | 5562 | 5602 | 5562 | ID=MS.gene060315.t1.exon7;Parent=MS.gene060315.t1 |
| 10975 | CDS | 5562 | 5602 | 5562 | ID=cds.MS.gene060315.t1;Parent=MS.gene060315.t1 |
| 10975 | exon | 5713 | 5789 | 5713 | ID=MS.gene060315.t1.exon8;Parent=MS.gene060315.t1 |
| 10975 | CDS | 5713 | 5789 | 5713 | ID=cds.MS.gene060315.t1;Parent=MS.gene060315.t1 |
| 10975 | exon | 6755 | 6850 | 6755 | ID=MS.gene060315.t1.exon9;Parent=MS.gene060315.t1 |
| 10975 | CDS | 6755 | 6850 | 6755 | ID=cds.MS.gene060315.t1;Parent=MS.gene060315.t1 |
| 10975 | exon | 7898 | 8220 | 7898 | ID=MS.gene060315.t1.exon10;Parent=MS.gene060315.t1 |
| 10975 | CDS | 7898 | 8220 | 7898 | ID=cds.MS.gene060315.t1;Parent=MS.gene060315.t1 |
| Gene Sequence |
| Protein sequence |
