Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029609.t1 | XP_013470044.1 | 93.6 | 407 | 24 | 1 | 1 | 407 | 1 | 405 | 3.80E-220 | 773.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029609.t1 | Q71DJ5 | 63.3 | 373 | 126 | 1 | 34 | 406 | 31 | 392 | 1.8e-141 | 503.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029609.t1 | A0A072VQK3 | 93.6 | 407 | 24 | 1 | 1 | 407 | 1 | 405 | 2.7e-220 | 773.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene060063 | MS.gene029609 | PPI |
| MS.gene040398 | MS.gene029609 | PPI |
| MS.gene060064 | MS.gene029609 | PPI |
| MS.gene029609 | MS.gene040400 | PPI |
| MS.gene040399 | MS.gene029609 | PPI |
| MS.gene029609 | MS.gene62511 | PPI |
| MS.gene79184 | MS.gene029609 | PPI |
| MS.gene060065 | MS.gene029609 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029609.t1 | MTR_1g107330 | 98.034 | 407 | 6 | 2 | 1 | 407 | 1 | 405 | 0.0 | 822 |
| MS.gene029609.t1 | MTR_1g107330 | 97.667 | 300 | 5 | 2 | 1 | 300 | 1 | 298 | 0.0 | 602 |
| MS.gene029609.t1 | MTR_5g084950 | 40.053 | 377 | 208 | 5 | 29 | 399 | 36 | 400 | 5.14e-105 | 316 |
| MS.gene029609.t1 | MTR_7g081050 | 40.691 | 376 | 199 | 6 | 35 | 400 | 43 | 404 | 1.16e-101 | 308 |
| MS.gene029609.t1 | MTR_3g081060 | 41.711 | 374 | 200 | 5 | 35 | 400 | 47 | 410 | 3.08e-101 | 307 |
| MS.gene029609.t1 | MTR_7g029365 | 39.314 | 379 | 217 | 4 | 29 | 401 | 41 | 412 | 1.19e-100 | 305 |
| MS.gene029609.t1 | MTR_3g081040 | 40.214 | 373 | 206 | 5 | 35 | 400 | 43 | 405 | 3.66e-100 | 304 |
| MS.gene029609.t1 | MTR_6g033965 | 42.473 | 372 | 196 | 5 | 35 | 400 | 44 | 403 | 6.12e-99 | 301 |
| MS.gene029609.t1 | MTR_7g081060 | 40.162 | 371 | 205 | 5 | 35 | 399 | 44 | 403 | 1.21e-95 | 292 |
| MS.gene029609.t1 | MTR_3g080980 | 39.516 | 372 | 209 | 6 | 35 | 400 | 43 | 404 | 1.02e-90 | 280 |
| MS.gene029609.t1 | MTR_6g033975 | 41.176 | 374 | 197 | 8 | 35 | 400 | 44 | 402 | 2.50e-89 | 276 |
| MS.gene029609.t1 | MTR_6g023740 | 33.738 | 412 | 254 | 7 | 1 | 399 | 7 | 412 | 4.62e-86 | 268 |
| MS.gene029609.t1 | MTR_6g023715 | 33.247 | 388 | 228 | 7 | 19 | 399 | 30 | 393 | 6.95e-81 | 254 |
| MS.gene029609.t1 | MTR_6g023750 | 32.961 | 358 | 226 | 6 | 50 | 399 | 4 | 355 | 8.20e-73 | 232 |
| MS.gene029609.t1 | MTR_7g029365 | 41.026 | 273 | 153 | 2 | 29 | 300 | 41 | 306 | 3.80e-72 | 229 |
| MS.gene029609.t1 | MTR_0595s0010 | 39.459 | 185 | 105 | 3 | 35 | 218 | 46 | 224 | 3.63e-43 | 154 |
| MS.gene029609.t1 | MTR_5g006650 | 43.382 | 136 | 68 | 2 | 88 | 219 | 63 | 193 | 5.09e-33 | 124 |
| MS.gene029609.t1 | MTR_5g049630 | 65.385 | 52 | 11 | 1 | 269 | 320 | 34 | 78 | 3.16e-15 | 71.6 |
| MS.gene029609.t1 | MTR_5g049820 | 90.625 | 32 | 3 | 0 | 269 | 300 | 903 | 934 | 1.32e-12 | 70.1 |
| MS.gene029609.t1 | MTR_7g451290 | 85.294 | 34 | 2 | 1 | 270 | 300 | 65 | 98 | 2.26e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029609.t1 | AT2G15230 | 63.271 | 373 | 126 | 1 | 34 | 406 | 31 | 392 | 0.0 | 511 |
| MS.gene029609.t1 | AT5G14180 | 36.816 | 402 | 234 | 7 | 6 | 399 | 26 | 415 | 3.67e-95 | 291 |
| MS.gene029609.t1 | AT5G14180 | 40.065 | 307 | 178 | 3 | 99 | 399 | 9 | 315 | 2.12e-82 | 255 |
| MS.gene029609.t1 | AT5G14180 | 40.000 | 305 | 177 | 3 | 101 | 399 | 2 | 306 | 3.27e-82 | 254 |
| MS.gene029609.t1 | AT5G14180 | 36.913 | 298 | 173 | 5 | 6 | 300 | 26 | 311 | 7.95e-68 | 218 |
| MS.gene029609.t1 | AT5G14180 | 35.448 | 268 | 158 | 5 | 6 | 270 | 26 | 281 | 1.38e-54 | 183 |
Find 90 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAGAGTTGGTTGTTGTTT+GGG | 0.186644 | 1.3:-73429592 | None:intergenic |
| TTGCCTTTGTTGATGGCTTA+TGG | 0.191042 | 1.3:+73434729 | MS.gene029609:CDS |
| CAGATCATTGCCTTTGTTGA+TGG | 0.268391 | 1.3:+73434722 | MS.gene029609:CDS |
| ACCTTCTCCAAGTACGATTA+TGG | 0.280197 | 1.3:+73434633 | MS.gene029609:CDS |
| ACAAAGGATGGTTTCTTGTT+AGG | 0.282718 | 1.3:+73429776 | MS.gene029609:CDS |
| ACAGAGAGTTGGTTGTTGTT+TGG | 0.284882 | 1.3:-73429593 | None:intergenic |
| TGCCTTTGTTGATGGCTTAT+GGG | 0.286118 | 1.3:+73434730 | MS.gene029609:CDS |
| ATATGATCCAAGTATGAAAT+TGG | 0.303318 | 1.3:-73432132 | None:intergenic |
| GCTTCTCCATGGCCTATTCA+TGG | 0.309670 | 1.3:+73429886 | MS.gene029609:CDS |
| ATGCGGCTAAGGTCAAATTT+TGG | 0.319645 | 1.3:-73434696 | None:intergenic |
| TCTGTCTCCAATTTCATACT+TGG | 0.350785 | 1.3:+73432125 | MS.gene029609:CDS |
| ATCAGTTTCTTCAAGTCAAT+GGG | 0.364667 | 1.3:+73434900 | MS.gene029609:CDS |
| CATCAGTTTCTTCAAGTCAA+TGG | 0.364835 | 1.3:+73434899 | MS.gene029609:CDS |
| AACTCAAAGTTATTTGTAGT+TGG | 0.368834 | 1.3:+73431937 | MS.gene029609:CDS |
| GGATCATATTAGTGCACCTT+TGG | 0.375065 | 1.3:+73432146 | MS.gene029609:CDS |
| TGCACCTTTGGTACTAAGAA+TGG | 0.380394 | 1.3:+73432158 | MS.gene029609:CDS |
| ACTCAAAGTTATTTGTAGTT+GGG | 0.404963 | 1.3:+73431938 | MS.gene029609:CDS |
| ATCTTTATCAGAGAAGAATA+AGG | 0.417364 | 1.3:+73430780 | MS.gene029609:CDS |
| ACATAAGGAAATCAAGAGAT+TGG | 0.417842 | 1.3:-73432448 | None:intergenic |
| GACATGCTGTCATCCATTAC+AGG | 0.418206 | 1.3:+73432492 | MS.gene029609:CDS |
| GTGGTTTATCTTGAAAACTA+TGG | 0.418535 | 1.3:+73434822 | MS.gene029609:CDS |
| AGTAAGTAGTAACCATGAAT+AGG | 0.420033 | 1.3:-73429898 | None:intergenic |
| AAATACACCAGAACAATCAT+TGG | 0.421081 | 1.3:+73430681 | MS.gene029609:CDS |
| AAGCTTTCCATAATCGTACT+TGG | 0.430219 | 1.3:-73434640 | None:intergenic |
| GGAAAAGATGCACATTGATC+AGG | 0.447013 | 1.3:+73432179 | MS.gene029609:CDS |
| GGGTGCGCTGCCGCCGTCGA+AGG | 0.448632 | 1.3:-73429569 | None:intergenic |
| CATCAACAAAGGCAATGATC+TGG | 0.449214 | 1.3:-73434721 | None:intergenic |
| GGCTTCATCCTTGCGGATCA+AGG | 0.449610 | 1.3:+73430703 | MS.gene029609:CDS |
| TTCATCAGCTGAATTTCAAA+AGG | 0.450695 | 1.3:+73432305 | MS.gene029609:CDS |
| GTTTCCGAAGGATAAGAGTA+TGG | 0.460626 | 1.3:-73429536 | None:intergenic |
| GACTTGAAGAAACTGATGAT+AGG | 0.472607 | 1.3:-73434894 | None:intergenic |
| AGAGAGTTGGTTGTTGTTTG+GGG | 0.478775 | 1.3:-73429591 | None:intergenic |
| ATGAAGCCCAATGATTGTTC+TGG | 0.479529 | 1.3:-73430688 | None:intergenic |
| AGGCCATGGAGAAGCAGAAC+CGG | 0.486022 | 1.3:-73429878 | None:intergenic |
| GCCTTTGTTGATGGCTTATG+GGG | 0.492263 | 1.3:+73434731 | MS.gene029609:CDS |
| ATGATCTGGGTATGCGGCTA+AGG | 0.493826 | 1.3:-73434707 | None:intergenic |
| TCATTTCCGCAAGATCGTAC+AGG | 0.501400 | 1.3:-73431891 | None:intergenic |
| ATTTGTAGTTGGGCATTCAC+AGG | 0.502438 | 1.3:+73431948 | MS.gene029609:CDS |
| CATGGAACATACTCTGGAAA+AGG | 0.507066 | 1.3:-73433561 | None:intergenic |
| ATTGCCATACTCTTATCCTT+CGG | 0.509142 | 1.3:+73429532 | MS.gene029609:CDS |
| CCTCCGGTTCTGCTTCTCCA+TGG | 0.509579 | 1.3:+73429875 | MS.gene029609:CDS |
| TTACTTTCAGATTGAAACAA+AGG | 0.517112 | 1.3:+73429760 | MS.gene029609:intron |
| TCAACCGGATATAGTAGAAA+AGG | 0.520659 | 1.3:+73432086 | MS.gene029609:CDS |
| TGTTCAGATGATTGCTACAA+TGG | 0.521008 | 1.3:+73432279 | MS.gene029609:intron |
| GTTCAGATGATTGCTACAAT+GGG | 0.525033 | 1.3:+73432280 | MS.gene029609:intron |
| CTGATAAAGATTTATGTCCA+TGG | 0.529374 | 1.3:-73430768 | None:intergenic |
| TGAGAGACATGAACCTGTAA+TGG | 0.530576 | 1.3:-73432505 | None:intergenic |
| ACAACAACAACGAGGTCCTC+CGG | 0.531545 | 1.3:+73429859 | MS.gene029609:CDS |
| TACTATATCCGGTTGAGTGA+AGG | 0.532690 | 1.3:-73432079 | None:intergenic |
| ATCAACAAAGGCAATGATCT+GGG | 0.532780 | 1.3:-73434720 | None:intergenic |
| AGAGTTGGTTGTTGTTTGGG+GGG | 0.532934 | 1.3:-73429589 | None:intergenic |
| ACTTGAAGAAACTGATGATA+GGG | 0.535072 | 1.3:-73434893 | None:intergenic |
| GCAGTTCCTTGAGTGTGTGC+TGG | 0.538191 | 1.3:-73434785 | None:intergenic |
| TCCATAATCGTACTTGGAGA+AGG | 0.540057 | 1.3:-73434634 | None:intergenic |
| AATACACCAGAACAATCATT+GGG | 0.543527 | 1.3:+73430682 | MS.gene029609:CDS |
| TTACCCTTGCTCTGAATATG+TGG | 0.550867 | 1.3:+73429639 | MS.gene029609:CDS |
| ATGAGTTCATCACAGAGAGT+TGG | 0.551768 | 1.3:-73429604 | None:intergenic |
| GAGAGTTGGTTGTTGTTTGG+GGG | 0.553474 | 1.3:-73429590 | None:intergenic |
| TTTCAGATTGAAACAAAGGA+TGG | 0.556157 | 1.3:+73429764 | MS.gene029609:intron |
| ACTTAGACGAGTATCACATA+AGG | 0.561077 | 1.3:-73432463 | None:intergenic |
| ATCATTGGGCTTCATCCTTG+CGG | 0.568286 | 1.3:+73430696 | MS.gene029609:CDS |
| TAGTAACCATGAATAGGCCA+TGG | 0.571896 | 1.3:-73429892 | None:intergenic |
| TAAACCACCTCAGGTGTGGA+TGG | 0.574032 | 1.3:-73434807 | None:intergenic |
| CGTGGAACACGTTGGAGCCA+TGG | 0.574865 | 1.3:+73430751 | MS.gene029609:CDS |
| CATTTCCGCAAGATCGTACA+GGG | 0.575973 | 1.3:-73431890 | None:intergenic |
| GATGAACTCATTCTTCCCGC+TGG | 0.577409 | 1.3:+73429616 | MS.gene029609:CDS |
| ACTTGGAGAAGGTACCTTTG+CGG | 0.586271 | 1.3:-73434623 | None:intergenic |
| AATACCACATATTCAGAGCA+AGG | 0.587448 | 1.3:-73429643 | None:intergenic |
| AAGATAAACCACCTCAGGTG+TGG | 0.587694 | 1.3:-73434811 | None:intergenic |
| TCAGAGCAAGGGTAACCAGC+GGG | 0.589366 | 1.3:-73429631 | None:intergenic |
| ATTAGCCCTGTACGATCTTG+CGG | 0.594612 | 1.3:+73431885 | MS.gene029609:CDS |
| TTGCTTCAACGAGTCACGCG+TGG | 0.604439 | 1.3:+73433486 | MS.gene029609:CDS |
| ACAATCAGGCAGGTGATGCA+TGG | 0.608662 | 1.3:+73430653 | MS.gene029609:intron |
| AACATCGCTCACTCCTTCGA+CGG | 0.610140 | 1.3:+73429556 | MS.gene029609:CDS |
| ATCGCTCACTCCTTCGACGG+CGG | 0.610445 | 1.3:+73429559 | MS.gene029609:CDS |
| TGATTTCCAGCACACACTCA+AGG | 0.617911 | 1.3:+73434779 | MS.gene029609:CDS |
| GGAACATACTCTGGAAAAGG+TGG | 0.634034 | 1.3:-73433558 | None:intergenic |
| ACTGCCATCCACACCTGAGG+TGG | 0.635259 | 1.3:+73434803 | MS.gene029609:CDS |
| AAGGCAATGATCTGGGTATG+CGG | 0.641163 | 1.3:-73434713 | None:intergenic |
| CATCAAAACCTTGATCCGCA+AGG | 0.641366 | 1.3:-73430711 | None:intergenic |
| TGTTCTCCAGTGATCCGCAA+AGG | 0.657082 | 1.3:+73434609 | MS.gene029609:intron |
| ATACCACATATTCAGAGCAA+GGG | 0.659010 | 1.3:-73429642 | None:intergenic |
| CCTTTGTTGATGGCTTATGG+GGG | 0.663104 | 1.3:+73434732 | MS.gene029609:CDS |
| GGAGTGAGCGATGTTTCCGA+AGG | 0.667016 | 1.3:-73429548 | None:intergenic |
| GGAACTGCCATCCACACCTG+AGG | 0.674091 | 1.3:+73434800 | MS.gene029609:CDS |
| TTCAGAGCAAGGGTAACCAG+CGG | 0.686767 | 1.3:-73429632 | None:intergenic |
| CCATGGAGAAGCAGAACCGG+AGG | 0.690082 | 1.3:-73429875 | None:intergenic |
| TCAGTTTCTTCAAGTCAATG+GGG | 0.699933 | 1.3:+73434901 | MS.gene029609:CDS |
| GAAATGTGCGTGGAACACGT+TGG | 0.739556 | 1.3:+73430743 | MS.gene029609:CDS |
| GTTTGGGTAGGAAATGTGCG+TGG | 0.748523 | 1.3:+73430733 | MS.gene029609:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTGATGTAAAAAATAT+AGG | + | chr1.3:73432811-73432830 | MS.gene029609:intron | 10.0% |
| !!! | AGAAAAAAACAATTTTATTT+AGG | + | chr1.3:73433198-73433217 | MS.gene029609:intron | 10.0% |
| !!! | ATATTTTTTACATCAATAAT+GGG | - | chr1.3:73432811-73432830 | None:intergenic | 10.0% |
| !!! | TATATTTTTTACATCAATAA+TGG | - | chr1.3:73432812-73432831 | None:intergenic | 10.0% |
| !! | AATGAAAAGTTATTTATGTT+TGG | - | chr1.3:73430363-73430382 | None:intergenic | 15.0% |
| !! | AATGCTTGAAAATATTTATA+GGG | + | chr1.3:73431031-73431050 | MS.gene029609:intron | 15.0% |
| !! | ATAAATTAATATATGTGTAG+CGG | - | chr1.3:73432846-73432865 | None:intergenic | 15.0% |
| !! | ATGACATTAAATTAAATTAC+AGG | + | chr1.3:73433454-73433473 | MS.gene029609:intron | 15.0% |
| !! | TAATGCTTGAAAATATTTAT+AGG | + | chr1.3:73431030-73431049 | MS.gene029609:intron | 15.0% |
| !! | TCTATTTATAAATTGCTAAA+AGG | + | chr1.3:73434448-73434467 | MS.gene029609:intron | 15.0% |
| !!! | AATTAGTTTCAAACTTTAAA+AGG | - | chr1.3:73430587-73430606 | None:intergenic | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+CGG | + | chr1.3:73430041-73430060 | MS.gene029609:intron | 15.0% |
| !!! | TCTTTTCAATTGTAAAATAT+GGG | + | chr1.3:73430878-73430897 | MS.gene029609:intron | 15.0% |
| !!! | TTCTTTTCAATTGTAAAATA+TGG | + | chr1.3:73430877-73430896 | MS.gene029609:intron | 15.0% |
| !! | AAAGATATGAATTAGAAAGA+AGG | - | chr1.3:73429702-73429721 | None:intergenic | 20.0% |
| !! | AAGATATGAATTAGAAAGAA+GGG | - | chr1.3:73429701-73429720 | None:intergenic | 20.0% |
| !! | ATTTAAAAGATATGCATTGT+CGG | - | chr1.3:73434093-73434112 | None:intergenic | 20.0% |
| !! | CATAGTGTATTAGTATAATA+AGG | + | chr1.3:73430087-73430106 | MS.gene029609:intron | 20.0% |
| !! | GATAGTAGAAGAATAAATAA+AGG | - | chr1.3:73432973-73432992 | None:intergenic | 20.0% |
| !! | TTAAAAATTCACTTTGTATG+CGG | + | chr1.3:73430487-73430506 | MS.gene029609:intron | 20.0% |
| !!! | AAATTCATTTTGCAATTTTG+TGG | - | chr1.3:73430954-73430973 | None:intergenic | 20.0% |
| !!! | AATATTTGTACAACCATTTT+GGG | + | chr1.3:73431058-73431077 | MS.gene029609:intron | 20.0% |
| !!! | ACAAGTTCTAAATGTATTAA+GGG | + | chr1.3:73431264-73431283 | MS.gene029609:intron | 20.0% |
| !!! | ACTATATTCTGTCATTTTTT+AGG | + | chr1.3:73430518-73430537 | MS.gene029609:intron | 20.0% |
| !!! | ATTATGAGAAGAGTATTATT+TGG | - | chr1.3:73432641-73432660 | None:intergenic | 20.0% |
| !!! | CTATATTCTGTCATTTTTTA+GGG | + | chr1.3:73430519-73430538 | MS.gene029609:intron | 20.0% |
| !!! | CTCATTTTAATCAATAACTT+AGG | + | chr1.3:73433349-73433368 | MS.gene029609:intron | 20.0% |
| !!! | TAATATTTGTACAACCATTT+TGG | + | chr1.3:73431057-73431076 | MS.gene029609:intron | 20.0% |
| !!! | TACAAGTTCTAAATGTATTA+AGG | + | chr1.3:73431263-73431282 | MS.gene029609:intron | 20.0% |
| !!! | TATATTCTGTCATTTTTTAG+GGG | + | chr1.3:73430520-73430539 | MS.gene029609:intron | 20.0% |
| !!! | TATATTTTTGAGTTTTGACA+CGG | + | chr1.3:73431350-73431369 | MS.gene029609:intron | 20.0% |
| !!! | TCAATTTAGAATCATTTATG+AGG | - | chr1.3:73430262-73430281 | None:intergenic | 20.0% |
| !!! | TGAGAAATTTTGATCAATTA+GGG | - | chr1.3:73433039-73433058 | None:intergenic | 20.0% |
| !!! | TTGAGAAATTTTGATCAATT+AGG | - | chr1.3:73433040-73433059 | None:intergenic | 20.0% |
| !!! | TTTTATTTTGGTAAAAACGA+GGG | - | chr1.3:73431800-73431819 | None:intergenic | 20.0% |
| !!! | TTTTTAGCTGTATATTGATA+AGG | + | chr1.3:73431652-73431671 | MS.gene029609:intron | 20.0% |
| ! | AAATGATTCTAAATTGAGCT+TGG | + | chr1.3:73430265-73430284 | MS.gene029609:intron | 25.0% |
| ! | AACTCAAAGTTATTTGTAGT+TGG | + | chr1.3:73431937-73431956 | MS.gene029609:CDS | 25.0% |
| ! | AAGAAACCAATTAAAGATGA+TGG | - | chr1.3:73433589-73433608 | None:intergenic | 25.0% |
| ! | AAGATGCAGTTATTAAAATG+GGG | + | chr1.3:73434016-73434035 | MS.gene029609:intron | 25.0% |
| ! | ACATTATCAAACATGATCAA+AGG | - | chr1.3:73433752-73433771 | None:intergenic | 25.0% |
| ! | ACGATATAGAATAAACAAAC+TGG | - | chr1.3:73433912-73433931 | None:intergenic | 25.0% |
| ! | ACTCAAAGTTATTTGTAGTT+GGG | + | chr1.3:73431938-73431957 | MS.gene029609:CDS | 25.0% |
| ! | ATATGATCCAAGTATGAAAT+TGG | - | chr1.3:73432135-73432154 | None:intergenic | 25.0% |
| ! | ATATGTAACTCTTGTATCTA+CGG | + | chr1.3:73433063-73433082 | MS.gene029609:intron | 25.0% |
| ! | ATCAACATATGCAAAAGAAA+AGG | - | chr1.3:73432360-73432379 | None:intergenic | 25.0% |
| ! | ATCCTTACAAATATGTCTTT+AGG | + | chr1.3:73434111-73434130 | MS.gene029609:intron | 25.0% |
| ! | ATCTTTATCAGAGAAGAATA+AGG | + | chr1.3:73430780-73430799 | MS.gene029609:CDS | 25.0% |
| ! | ATGTTATAGAACTCATTGAA+TGG | + | chr1.3:73430825-73430844 | MS.gene029609:intron | 25.0% |
| ! | ATTAGAAAGAAGGGTAATAT+TGG | - | chr1.3:73429692-73429711 | None:intergenic | 25.0% |
| ! | CAAATAAGAAATGCTTCATT+CGG | + | chr1.3:73431582-73431601 | MS.gene029609:intron | 25.0% |
| ! | CAAGATGCAGTTATTAAAAT+GGG | + | chr1.3:73434015-73434034 | MS.gene029609:intron | 25.0% |
| ! | CAGTGTAAAACTAATTACTA+AGG | - | chr1.3:73433949-73433968 | None:intergenic | 25.0% |
| ! | GGGTTTAACAATAAATTCAA+TGG | - | chr1.3:73430323-73430342 | None:intergenic | 25.0% |
| ! | TAAATAAAGGTCAGATACTA+TGG | - | chr1.3:73432960-73432979 | None:intergenic | 25.0% |
| ! | TCAAGATGCAGTTATTAAAA+TGG | + | chr1.3:73434014-73434033 | MS.gene029609:intron | 25.0% |
| ! | TGGATATATTCATGTAAACA+GGG | - | chr1.3:73430343-73430362 | None:intergenic | 25.0% |
| ! | TGTAAAACTAATTACTAAGG+TGG | - | chr1.3:73433946-73433965 | None:intergenic | 25.0% |
| ! | TTACTTTCAGATTGAAACAA+AGG | + | chr1.3:73429760-73429779 | MS.gene029609:intron | 25.0% |
| ! | TTATGGAAAGCTTAAAAATC+TGG | + | chr1.3:73434650-73434669 | MS.gene029609:CDS | 25.0% |
| ! | TTGGATATATTCATGTAAAC+AGG | - | chr1.3:73430344-73430363 | None:intergenic | 25.0% |
| ! | TTTCCTATAATGTCATTACT+AGG | + | chr1.3:73434155-73434174 | MS.gene029609:intron | 25.0% |
| !! | AAACATTTTTCTATCTCTCT+TGG | - | chr1.3:73433098-73433117 | None:intergenic | 25.0% |
| !! | GTTATTGATTAAAATGAGAG+AGG | - | chr1.3:73433347-73433366 | None:intergenic | 25.0% |
| !!! | AACAATTTTATTTAGGACAC+CGG | + | chr1.3:73433205-73433224 | MS.gene029609:intron | 25.0% |
| !!! | AACCTTTTTTTCTCTTCTTT+TGG | - | chr1.3:73431189-73431208 | None:intergenic | 25.0% |
| !!! | ACCTTTTTTTCTCTTCTTTT+GGG | - | chr1.3:73431188-73431207 | None:intergenic | 25.0% |
| !!! | AGAAATTTTGATCAATTAGG+GGG | - | chr1.3:73433037-73433056 | None:intergenic | 25.0% |
| !!! | ATATCTTGCTATTTCAATGT+GGG | + | chr1.3:73430115-73430134 | MS.gene029609:intron | 25.0% |
| !!! | CATACTCATCAGTTTTATTT+TGG | - | chr1.3:73431812-73431831 | None:intergenic | 25.0% |
| !!! | GAGAAATTTTGATCAATTAG+GGG | - | chr1.3:73433038-73433057 | None:intergenic | 25.0% |
| !!! | GTTTTATTTTGGTAAAAACG+AGG | - | chr1.3:73431801-73431820 | None:intergenic | 25.0% |
| !!! | TGTTTCTAAAATGTAAGCTA+TGG | - | chr1.3:73432022-73432041 | None:intergenic | 25.0% |
| !!! | TTTATTTTGGTAAAAACGAG+GGG | - | chr1.3:73431799-73431818 | None:intergenic | 25.0% |
| !!! | TTTCTGTTTTTCTTGCTAAT+TGG | + | chr1.3:73429719-73429738 | MS.gene029609:intron | 25.0% |
| !!! | TTTTACTGTGTTATTTGCTT+TGG | + | chr1.3:73434494-73434513 | MS.gene029609:intron | 25.0% |
| AAAACAATAGAGAGAGAAAG+AGG | - | chr1.3:73431162-73431181 | None:intergenic | 30.0% | |
| AAACAATAGAGAGAGAAAGA+GGG | - | chr1.3:73431161-73431180 | None:intergenic | 30.0% | |
| AAACATCTTATCCATCTTAG+GGG | + | chr1.3:73432037-73432056 | MS.gene029609:intron | 30.0% | |
| AAATACACCAGAACAATCAT+TGG | + | chr1.3:73430681-73430700 | MS.gene029609:CDS | 30.0% | |
| AAGAGAAAAAGAAACTACAG+CGG | - | chr1.3:73434214-73434233 | None:intergenic | 30.0% | |
| AATACACCAGAACAATCATT+GGG | + | chr1.3:73430682-73430701 | MS.gene029609:CDS | 30.0% | |
| ACATAAGGAAATCAAGAGAT+TGG | - | chr1.3:73432451-73432470 | None:intergenic | 30.0% | |
| ACCTCATTTCTATTAGCAAA+TGG | - | chr1.3:73431299-73431318 | None:intergenic | 30.0% | |
| ACTTATGATGATCTCGAAAA+GGG | + | chr1.3:73431546-73431565 | MS.gene029609:intron | 30.0% | |
| ACTTGAAGAAACTGATGATA+GGG | - | chr1.3:73434896-73434915 | None:intergenic | 30.0% | |
| AGAAACATCTTATCCATCTT+AGG | + | chr1.3:73432035-73432054 | MS.gene029609:intron | 30.0% | |
| AGTAAGTAGTAACCATGAAT+AGG | - | chr1.3:73429901-73429920 | None:intergenic | 30.0% | |
| AGTACTTCTTATAAGATCAG+AGG | - | chr1.3:73431529-73431548 | None:intergenic | 30.0% | |
| ATAGAGTTTAAAAGACAGTC+TGG | - | chr1.3:73434433-73434452 | None:intergenic | 30.0% | |
| ATCAGTTTCTTCAAGTCAAT+GGG | + | chr1.3:73434900-73434919 | MS.gene029609:CDS | 30.0% | |
| ATCATACACAAAATGAAAGC+TGG | - | chr1.3:73434524-73434543 | None:intergenic | 30.0% | |
| ATGTGAAAAGGATGATTTAC+AGG | - | chr1.3:73431985-73432004 | None:intergenic | 30.0% | |
| ATTATTTGATCTTGAGCAGT+TGG | + | chr1.3:73431617-73431636 | MS.gene029609:intron | 30.0% | |
| CAAAACTCTGCAAATATTAC+TGG | - | chr1.3:73430448-73430467 | None:intergenic | 30.0% | |
| CAAAAGAAAAGGAGAAAAAC+AGG | - | chr1.3:73432349-73432368 | None:intergenic | 30.0% | |
| CAAAGAAGTAATGCTTCATT+CGG | + | chr1.3:73431487-73431506 | MS.gene029609:intron | 30.0% | |
| CAATGAGTTCTATAACATGA+AGG | - | chr1.3:73430823-73430842 | None:intergenic | 30.0% | |
| CATCATCAACCAGTAATTAA+TGG | - | chr1.3:73434347-73434366 | None:intergenic | 30.0% | |
| CATGTTCCATCATCTTTAAT+TGG | + | chr1.3:73433580-73433599 | MS.gene029609:intron | 30.0% | |
| CTCCTAAAGACATATTTGTA+AGG | - | chr1.3:73434116-73434135 | None:intergenic | 30.0% | |
| CTGATAAAGATTTATGTCCA+TGG | - | chr1.3:73430771-73430790 | None:intergenic | 30.0% | |
| CTTAAAAATCTGGTAGAGTA+TGG | + | chr1.3:73434660-73434679 | MS.gene029609:CDS | 30.0% | |
| GAAACATCTTATCCATCTTA+GGG | + | chr1.3:73432036-73432055 | MS.gene029609:intron | 30.0% | |
| GAATAAACAAACTGGTACTA+AGG | - | chr1.3:73433904-73433923 | None:intergenic | 30.0% | |
| GATCAAAGGTAAATTTGTGA+TGG | - | chr1.3:73433738-73433757 | None:intergenic | 30.0% | |
| GTACCTAGTAATGACATTAT+AGG | - | chr1.3:73434161-73434180 | None:intergenic | 30.0% | |
| GTGGTTTATCTTGAAAACTA+TGG | + | chr1.3:73434822-73434841 | MS.gene029609:CDS | 30.0% | |
| TAACTGCATCTTGAAATTGA+CGG | - | chr1.3:73434008-73434027 | None:intergenic | 30.0% | |
| TACTTATGATGATCTCGAAA+AGG | + | chr1.3:73431545-73431564 | MS.gene029609:intron | 30.0% | |
| TAGAACCAAACATACACTAA+AGG | - | chr1.3:73430167-73430186 | None:intergenic | 30.0% | |
| TAGCAATTGCCATTAATTAC+TGG | + | chr1.3:73434335-73434354 | MS.gene029609:intron | 30.0% | |
| TATGTATGTCTGTGTTTAGA+AGG | + | chr1.3:73432539-73432558 | MS.gene029609:intron | 30.0% | |
| TCAACAACTAAACTTTCATG+TGG | + | chr1.3:73431007-73431026 | MS.gene029609:intron | 30.0% | |
| TCCCAAAAGAAGAGAAAAAA+AGG | + | chr1.3:73431184-73431203 | MS.gene029609:intron | 30.0% | |
| TTCATCAGCTGAATTTCAAA+AGG | + | chr1.3:73432305-73432324 | MS.gene029609:CDS | 30.0% | |
| TTGATTAAAATGAGAGAGGA+AGG | - | chr1.3:73433343-73433362 | None:intergenic | 30.0% | |
| TTTCAGATTGAAACAAAGGA+TGG | + | chr1.3:73429764-73429783 | MS.gene029609:intron | 30.0% | |
| ! | AAGGTTTTTGAATCATGCTT+AGG | - | chr1.3:73433324-73433343 | None:intergenic | 30.0% |
| ! | ACTTTTCTATACATAGCCAA+GGG | + | chr1.3:73430924-73430943 | MS.gene029609:intron | 30.0% |
| ! | AGCTTTCATTTTGTGTATGA+TGG | + | chr1.3:73434523-73434542 | MS.gene029609:intron | 30.0% |
| ! | CAATAACTTAGGAATCCTTT+TGG | + | chr1.3:73433360-73433379 | MS.gene029609:intron | 30.0% |
| ! | CAGTAATATTTGCAGAGTTT+TGG | + | chr1.3:73430446-73430465 | MS.gene029609:intron | 30.0% |
| ! | CTAAAAGGACATTTGAAGTT+TGG | + | chr1.3:73434463-73434482 | MS.gene029609:intron | 30.0% |
| ! | TACAAATATGTCTTTAGGAG+AGG | + | chr1.3:73434116-73434135 | MS.gene029609:intron | 30.0% |
| ! | TACTTTTCTATACATAGCCA+AGG | + | chr1.3:73430923-73430942 | MS.gene029609:intron | 30.0% |
| ! | TCAACCTTTTCTACTATATC+CGG | - | chr1.3:73432093-73432112 | None:intergenic | 30.0% |
| ! | TTAACTCATTTTCAGCGATT+GGG | + | chr1.3:73432422-73432441 | MS.gene029609:intron | 30.0% |
| ! | TTATGCCATTTGATACAATC+AGG | + | chr1.3:73430639-73430658 | MS.gene029609:intron | 30.0% |
| ! | TTTTCCATTCTTAGTACCAA+AGG | - | chr1.3:73432165-73432184 | None:intergenic | 30.0% |
| !! | AACTTGTTGAAAACATTCAG+AGG | - | chr1.3:73431378-73431397 | None:intergenic | 30.0% |
| !! | AGCTATTTTGTGACAACTTT+TGG | - | chr1.3:73431215-73431234 | None:intergenic | 30.0% |
| !! | CAATTAAAGATGATGGAACA+TGG | - | chr1.3:73433582-73433601 | None:intergenic | 30.0% |
| !! | CTTGCTATTATTCTTGTCAA+TGG | + | chr1.3:73434564-73434583 | MS.gene029609:intron | 30.0% |
| !! | GAATTTGTTATTGACCTGTT+TGG | + | chr1.3:73430222-73430241 | MS.gene029609:intron | 30.0% |
| !! | GAGAAGAGTATTATTTGGAT+TGG | - | chr1.3:73432636-73432655 | None:intergenic | 30.0% |
| !! | GATATCTTGCTATTTCAATG+TGG | + | chr1.3:73430114-73430133 | MS.gene029609:intron | 30.0% |
| !! | GCTATTTTGTGACAACTTTT+GGG | - | chr1.3:73431214-73431233 | None:intergenic | 30.0% |
| !! | TTGATGATGAATCAGCATAT+GGG | + | chr1.3:73434358-73434377 | MS.gene029609:intron | 30.0% |
| !! | TTTTCAGCACTAGTTTGAAA+AGG | + | chr1.3:73431450-73431469 | MS.gene029609:intron | 30.0% |
| !!! | TGTATGTTTGGTTCTACTTT+TGG | + | chr1.3:73430171-73430190 | MS.gene029609:intron | 30.0% |
| AAACAGGACAGAATGAAAAC+TGG | - | chr1.3:73432333-73432352 | None:intergenic | 35.0% | |
| AACAATAGAGAGAGAAAGAG+GGG | - | chr1.3:73431160-73431179 | None:intergenic | 35.0% | |
| AAGCTTTCCATAATCGTACT+TGG | - | chr1.3:73434643-73434662 | None:intergenic | 35.0% | |
| AATACCACATATTCAGAGCA+AGG | - | chr1.3:73429646-73429665 | None:intergenic | 35.0% | |
| AATGCTGGTAGAATGTGAAA+AGG | - | chr1.3:73431997-73432016 | None:intergenic | 35.0% | |
| ACAAAGGATGGTTTCTTGTT+AGG | + | chr1.3:73429776-73429795 | MS.gene029609:CDS | 35.0% | |
| ACAGTCTGGTGGAAATAATT+AGG | - | chr1.3:73434419-73434438 | None:intergenic | 35.0% | |
| ACTTAGACGAGTATCACATA+AGG | - | chr1.3:73432466-73432485 | None:intergenic | 35.0% | |
| AGCTTCCTTTAGTGTATGTT+TGG | + | chr1.3:73430159-73430178 | MS.gene029609:intron | 35.0% | |
| ATACCACATATTCAGAGCAA+GGG | - | chr1.3:73429645-73429664 | None:intergenic | 35.0% | |
| ATCAACAAAGGCAATGATCT+GGG | - | chr1.3:73434723-73434742 | None:intergenic | 35.0% | |
| ATGTAAGCTATGGAAAATGC+TGG | - | chr1.3:73432012-73432031 | None:intergenic | 35.0% | |
| ATTGACCTGTTTGGATGTAT+TGG | + | chr1.3:73430231-73430250 | MS.gene029609:intron | 35.0% | |
| ATTGCCATACTCTTATCCTT+CGG | + | chr1.3:73429532-73429551 | MS.gene029609:CDS | 35.0% | |
| CAAAACCAATACATCCAAAC+AGG | - | chr1.3:73430239-73430258 | None:intergenic | 35.0% | |
| CATCAGTTTCTTCAAGTCAA+TGG | + | chr1.3:73434899-73434918 | MS.gene029609:CDS | 35.0% | |
| GAAAAATAGAGACCTCTCAT+TGG | - | chr1.3:73433976-73433995 | None:intergenic | 35.0% | |
| GAAATAATTGTCCCCTAAGA+TGG | - | chr1.3:73432051-73432070 | None:intergenic | 35.0% | |
| GACTTGAAGAAACTGATGAT+AGG | - | chr1.3:73434897-73434916 | None:intergenic | 35.0% | |
| GGGAAGTAATAATGTTCAGT+GGG | + | chr1.3:73433831-73433850 | MS.gene029609:intron | 35.0% | |
| GTTCAGATGATTGCTACAAT+GGG | + | chr1.3:73432280-73432299 | MS.gene029609:intron | 35.0% | |
| TAATATATGTGTAGCGGTGA+TGG | - | chr1.3:73432840-73432859 | None:intergenic | 35.0% | |
| TCAACCGGATATAGTAGAAA+AGG | + | chr1.3:73432086-73432105 | MS.gene029609:CDS | 35.0% | |
| TCAGTTTCTTCAAGTCAATG+GGG | + | chr1.3:73434901-73434920 | MS.gene029609:CDS | 35.0% | |
| TCTCAAAAGTTGTCCCAAAA+TGG | - | chr1.3:73431074-73431093 | None:intergenic | 35.0% | |
| TCTGTCTCCAATTTCATACT+TGG | + | chr1.3:73432125-73432144 | MS.gene029609:CDS | 35.0% | |
| TGACTAGAATTCTTCGACAA+TGG | - | chr1.3:73431707-73431726 | None:intergenic | 35.0% | |
| TGGCATTCATGAAAGACAAA+AGG | - | chr1.3:73432665-73432684 | None:intergenic | 35.0% | |
| TGTTCAGATGATTGCTACAA+TGG | + | chr1.3:73432279-73432298 | MS.gene029609:intron | 35.0% | |
| TTGAAATTGACGGAATGACA+TGG | - | chr1.3:73433998-73434017 | None:intergenic | 35.0% | |
| TTTGCTAAGCTGGAAATACA+TGG | - | chr1.3:73432383-73432402 | None:intergenic | 35.0% | |
| ! | AAATATGTCTTTAGGAGAGG+AGG | + | chr1.3:73434119-73434138 | MS.gene029609:intron | 35.0% |
| ! | CTTAACTCATTTTCAGCGAT+TGG | + | chr1.3:73432421-73432440 | MS.gene029609:intron | 35.0% |
| ! | GCCATTTGCTAATAGAAATG+AGG | + | chr1.3:73431295-73431314 | MS.gene029609:intron | 35.0% |
| ! | GCTGTAGTTTCTTTTTCTCT+TGG | + | chr1.3:73434213-73434232 | MS.gene029609:intron | 35.0% |
| ! | TACATAATTGATTCTCGAGG+TGG | + | chr1.3:73430198-73430217 | MS.gene029609:intron | 35.0% |
| ! | TCCAGCTTAGCAAATTTTCA+CGG | + | chr1.3:73432389-73432408 | MS.gene029609:intron | 35.0% |
| ! | TGACTTTTCTGACTATTCAC+TGG | + | chr1.3:73433627-73433646 | MS.gene029609:intron | 35.0% |
| ! | TGTCCTTTTGTAGCACTTTT+GGG | + | chr1.3:73431846-73431865 | MS.gene029609:intron | 35.0% |
| ! | TTGTCCTTTTGTAGCACTTT+TGG | + | chr1.3:73431845-73431864 | MS.gene029609:intron | 35.0% |
| !! | AATCCCAAAAGTGCTACAAA+AGG | - | chr1.3:73431852-73431871 | None:intergenic | 35.0% |
| !! | GAAAAGGTGGTTCAAGTTTT+TGG | - | chr1.3:73433548-73433567 | None:intergenic | 35.0% |
| !! | GGATCAAGGTTTTGATGTTT+GGG | + | chr1.3:73430717-73430736 | MS.gene029609:CDS | 35.0% |
| !! | GTTGATGATGAATCAGCATA+TGG | + | chr1.3:73434357-73434376 | MS.gene029609:intron | 35.0% |
| !! | GTTTTGGACAGTGTTTGAAT+TGG | + | chr1.3:73430462-73430481 | MS.gene029609:intron | 35.0% |
| !! | TTCAAGTTTTTGGAGGATGA+TGG | - | chr1.3:73433538-73433557 | None:intergenic | 35.0% |
| !! | TTTTCAAGATAAACCACCTC+AGG | - | chr1.3:73434819-73434838 | None:intergenic | 35.0% |
| !!! | ATGTTTGGTTCTACTTTTGG+AGG | + | chr1.3:73430174-73430193 | MS.gene029609:intron | 35.0% |
| !!! | TGTTTGGTTCTACTTTTGGA+GGG | + | chr1.3:73430175-73430194 | MS.gene029609:intron | 35.0% |
| !!! | TTTTGTAGCACTTTTGGGAT+TGG | + | chr1.3:73431851-73431870 | MS.gene029609:intron | 35.0% |
| ACCTGCCTGATTGTATCAAA+TGG | - | chr1.3:73430647-73430666 | None:intergenic | 40.0% | |
| ACCTTCTCCAAGTACGATTA+TGG | + | chr1.3:73434633-73434652 | MS.gene029609:CDS | 40.0% | |
| AGCCAGCAAAGTAATTGCAA+TGG | - | chr1.3:73432685-73432704 | None:intergenic | 40.0% | |
| ATACACGCAGAATGACCAAA+AGG | - | chr1.3:73433378-73433397 | None:intergenic | 40.0% | |
| ATGAAGCACATACACACACA+TGG | - | chr1.3:73430070-73430089 | None:intergenic | 40.0% | |
| ATGAAGCCCAATGATTGTTC+TGG | - | chr1.3:73430691-73430710 | None:intergenic | 40.0% | |
| ATGAGTTCATCACAGAGAGT+TGG | - | chr1.3:73429607-73429626 | None:intergenic | 40.0% | |
| ATGATGAATCAGCATATGGG+TGG | + | chr1.3:73434361-73434380 | MS.gene029609:intron | 40.0% | |
| ATGGAACATGGAACATACTC+TGG | - | chr1.3:73433570-73433589 | None:intergenic | 40.0% | |
| ATGGCTCGTATGAGTGTTAT+AGG | + | chr1.3:73433143-73433162 | MS.gene029609:intron | 40.0% | |
| ATTTGTAGTTGGGCATTCAC+AGG | + | chr1.3:73431948-73431967 | MS.gene029609:CDS | 40.0% | |
| CAGATCATTGCCTTTGTTGA+TGG | + | chr1.3:73434722-73434741 | MS.gene029609:CDS | 40.0% | |
| CATCAACAAAGGCAATGATC+TGG | - | chr1.3:73434724-73434743 | None:intergenic | 40.0% | |
| CGTATGAGTGTTATAGGTGT+CGG | + | chr1.3:73433149-73433168 | MS.gene029609:intron | 40.0% | |
| CTTAGGCAAGTTATGAAGCA+CGG | - | chr1.3:73433307-73433326 | None:intergenic | 40.0% | |
| CTTCGTACAAATATGCTCCT+TGG | - | chr1.3:73434302-73434321 | None:intergenic | 40.0% | |
| GAGTTTAAAAGACAGTCTGG+TGG | - | chr1.3:73434430-73434449 | None:intergenic | 40.0% | |
| GCTCAAAAACAACAACAACG+AGG | + | chr1.3:73429851-73429870 | MS.gene029609:CDS | 40.0% | |
| GGAAAAGATGCACATTGATC+AGG | + | chr1.3:73432179-73432198 | MS.gene029609:CDS | 40.0% | |
| GGATCATATTAGTGCACCTT+TGG | + | chr1.3:73432146-73432165 | MS.gene029609:CDS | 40.0% | |
| GGGGAAGTAATAATGTTCAG+TGG | + | chr1.3:73433830-73433849 | MS.gene029609:intron | 40.0% | |
| GTTTCCGAAGGATAAGAGTA+TGG | - | chr1.3:73429539-73429558 | None:intergenic | 40.0% | |
| TACTATATCCGGTTGAGTGA+AGG | - | chr1.3:73432082-73432101 | None:intergenic | 40.0% | |
| TAGTAACCATGAATAGGCCA+TGG | - | chr1.3:73429895-73429914 | None:intergenic | 40.0% | |
| TCCATAATCGTACTTGGAGA+AGG | - | chr1.3:73434637-73434656 | None:intergenic | 40.0% | |
| TGACATGCTTTATCTTGCCA+AGG | + | chr1.3:73434282-73434301 | MS.gene029609:intron | 40.0% | |
| TGAGAGACATGAACCTGTAA+TGG | - | chr1.3:73432508-73432527 | None:intergenic | 40.0% | |
| TGCACCTTTGGTACTAAGAA+TGG | + | chr1.3:73432158-73432177 | MS.gene029609:CDS | 40.0% | |
| TGCCATTGCAATTACTTTGC+TGG | + | chr1.3:73432680-73432699 | MS.gene029609:intron | 40.0% | |
| TTACACTGACATCCAATGAG+AGG | + | chr1.3:73433961-73433980 | MS.gene029609:intron | 40.0% | |
| TTTGTCTGAGTTGTCTGACA+TGG | + | chr1.3:73433124-73433143 | MS.gene029609:intron | 40.0% | |
| ! | ACAGAGAGTTGGTTGTTGTT+TGG | - | chr1.3:73429596-73429615 | None:intergenic | 40.0% |
| ! | ACGTCTTCTATCAGAAGTGT+CGG | - | chr1.3:73429978-73429997 | None:intergenic | 40.0% |
| ! | ATACGATGTGACTTGTGCTT+TGG | + | chr1.3:73431773-73431792 | MS.gene029609:intron | 40.0% |
| ! | ATGCGGCTAAGGTCAAATTT+TGG | - | chr1.3:73434699-73434718 | None:intergenic | 40.0% |
| ! | CAGCTTAGCAAATTTTCACG+GGG | + | chr1.3:73432391-73432410 | MS.gene029609:intron | 40.0% |
| ! | CATGGAACATACTCTGGAAA+AGG | - | chr1.3:73433564-73433583 | None:intergenic | 40.0% |
| ! | CCAGCTTAGCAAATTTTCAC+GGG | + | chr1.3:73432390-73432409 | MS.gene029609:intron | 40.0% |
| ! | GGGTACATAATTGATTCTCG+AGG | + | chr1.3:73430195-73430214 | MS.gene029609:intron | 40.0% |
| ! | TTACCCTTGCTCTGAATATG+TGG | + | chr1.3:73429639-73429658 | MS.gene029609:CDS | 40.0% |
| !! | AAGGTGGTTCAAGTTTTTGG+AGG | - | chr1.3:73433545-73433564 | None:intergenic | 40.0% |
| !! | AGAGAGTTGGTTGTTGTTTG+GGG | - | chr1.3:73429594-73429613 | None:intergenic | 40.0% |
| !! | CAAGGTTTTGATGTTTGGGT+AGG | + | chr1.3:73430721-73430740 | MS.gene029609:CDS | 40.0% |
| !! | CAGAGAGTTGGTTGTTGTTT+GGG | - | chr1.3:73429595-73429614 | None:intergenic | 40.0% |
| !! | CGGATCAAGGTTTTGATGTT+TGG | + | chr1.3:73430716-73430735 | MS.gene029609:CDS | 40.0% |
| !! | TGCCTTTGTTGATGGCTTAT+GGG | + | chr1.3:73434730-73434749 | MS.gene029609:CDS | 40.0% |
| !! | TTGCCTTTGTTGATGGCTTA+TGG | + | chr1.3:73434729-73434748 | MS.gene029609:CDS | 40.0% |
| !!! | CTGTCATTTTTTAGGGGAAG+TGG | + | chr1.3:73430526-73430545 | MS.gene029609:intron | 40.0% |
| !!! | TTTTTGGAGGATGATGGATG+AGG | - | chr1.3:73433532-73433551 | None:intergenic | 40.0% |
| AAGATAAACCACCTCAGGTG+TGG | - | chr1.3:73434814-73434833 | None:intergenic | 45.0% | |
| AAGGCAATGATCTGGGTATG+CGG | - | chr1.3:73434716-73434735 | None:intergenic | 45.0% | |
| AATCAGCATATGGGTGGAAG+TGG | + | chr1.3:73434367-73434386 | MS.gene029609:intron | 45.0% | |
| ATCATTGGGCTTCATCCTTG+CGG | + | chr1.3:73430696-73430715 | MS.gene029609:CDS | 45.0% | |
| ATTAGCCCTGTACGATCTTG+CGG | + | chr1.3:73431885-73431904 | MS.gene029609:CDS | 45.0% | |
| CATCAAAACCTTGATCCGCA+AGG | - | chr1.3:73430714-73430733 | None:intergenic | 45.0% | |
| CATTTCCGCAAGATCGTACA+GGG | - | chr1.3:73431893-73431912 | None:intergenic | 45.0% | |
| CGCACAATTCAGATCAGAGA+GGG | - | chr1.3:73432782-73432801 | None:intergenic | 45.0% | |
| CTCGAAAAGGGAGAACAGAA+TGG | + | chr1.3:73431558-73431577 | MS.gene029609:intron | 45.0% | |
| CTTCTGATAGAAGACGTGTC+TGG | + | chr1.3:73429981-73430000 | MS.gene029609:intron | 45.0% | |
| GACATGCTGTCATCCATTAC+AGG | + | chr1.3:73432492-73432511 | MS.gene029609:CDS | 45.0% | |
| GCCATTTGATACAATCAGGC+AGG | + | chr1.3:73430643-73430662 | MS.gene029609:intron | 45.0% | |
| GGATCACTGGAGAACATATG+AGG | - | chr1.3:73434605-73434624 | None:intergenic | 45.0% | |
| TCATTTCCGCAAGATCGTAC+AGG | - | chr1.3:73431894-73431913 | None:intergenic | 45.0% | |
| TGATTTCCAGCACACACTCA+AGG | + | chr1.3:73434779-73434798 | MS.gene029609:CDS | 45.0% | |
| TTACTTCGACACTCCTAGAC+CGG | - | chr1.3:73433178-73433197 | None:intergenic | 45.0% | |
| ! | CGGCTAAGGTCAAATTTTGG+TGG | - | chr1.3:73434696-73434715 | None:intergenic | 45.0% |
| ! | GCAATTTTGTGGAACACCCT+TGG | - | chr1.3:73430943-73430962 | None:intergenic | 45.0% |
| ! | GGAACATACTCTGGAAAAGG+TGG | - | chr1.3:73433561-73433580 | None:intergenic | 45.0% |
| ! | TTTTGCTGCCTTCACTCAAC+CGG | + | chr1.3:73432071-73432090 | MS.gene029609:CDS | 45.0% |
| !! | ACTTGGAGAAGGTACCTTTG+CGG | - | chr1.3:73434626-73434645 | None:intergenic | 45.0% |
| !! | AGAGTTGGTTGTTGTTTGGG+GGG | - | chr1.3:73429592-73429611 | None:intergenic | 45.0% |
| !! | CCCGTGAAAATTTGCTAAGC+TGG | - | chr1.3:73432393-73432412 | None:intergenic | 45.0% |
| !! | CCTTTGTTGATGGCTTATGG+GGG | + | chr1.3:73434732-73434751 | MS.gene029609:CDS | 45.0% |
| !! | GAGAGTTGGTTGTTGTTTGG+GGG | - | chr1.3:73429593-73429612 | None:intergenic | 45.0% |
| !! | GCCTTTGTTGATGGCTTATG+GGG | + | chr1.3:73434731-73434750 | MS.gene029609:CDS | 45.0% |
| !! | GCGCTGTTTTCAATTAGCAG+TGG | + | chr1.3:73433649-73433668 | MS.gene029609:intron | 45.0% |
| !! | GTGTTATAGGTGTCGGATAC+CGG | + | chr1.3:73433156-73433175 | MS.gene029609:intron | 45.0% |
| !! | TATATTAATTTATTTATAGA+CGG | + | chr1.3:73432853-73432872 | MS.gene029609:intron | 5.0% |
| AACATCGCTCACTCCTTCGA+CGG | + | chr1.3:73429556-73429575 | MS.gene029609:CDS | 50.0% | |
| ACAACAACAACGAGGTCCTC+CGG | + | chr1.3:73429859-73429878 | MS.gene029609:CDS | 50.0% | |
| ACAATCAGGCAGGTGATGCA+TGG | + | chr1.3:73430653-73430672 | MS.gene029609:intron | 50.0% | |
| ACGTGTCGGACAACTAAGAC+CGG | - | chr1.3:73433227-73433246 | None:intergenic | 50.0% | |
| ACGTGTCGTACGAGTGTCAT+GGG | + | chr1.3:73433243-73433262 | MS.gene029609:intron | 50.0% | |
| ATGATCTGGGTATGCGGCTA+AGG | - | chr1.3:73434710-73434729 | None:intergenic | 50.0% | |
| CCCCCATAAGCCATCAACAA+AGG | - | chr1.3:73434735-73434754 | None:intergenic | 50.0% | |
| GAAATGTGCGTGGAACACGT+TGG | + | chr1.3:73430743-73430762 | MS.gene029609:CDS | 50.0% | |
| GATGAACTCATTCTTCCCGC+TGG | + | chr1.3:73429616-73429635 | MS.gene029609:CDS | 50.0% | |
| GCGCACAATTCAGATCAGAG+AGG | - | chr1.3:73432783-73432802 | None:intergenic | 50.0% | |
| GCTTCTCCATGGCCTATTCA+TGG | + | chr1.3:73429886-73429905 | MS.gene029609:CDS | 50.0% | |
| GTTTGGGTAGGAAATGTGCG+TGG | + | chr1.3:73430733-73430752 | MS.gene029609:CDS | 50.0% | |
| TAAACCACCTCAGGTGTGGA+TGG | - | chr1.3:73434810-73434829 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACCTCT+AGG | - | chr1.3:73433296-73433315 | None:intergenic | 50.0% | |
| TCAGATCAGAGAGGGTGAGT+AGG | - | chr1.3:73432774-73432793 | None:intergenic | 50.0% | |
| TGTTCTCCAGTGATCCGCAA+AGG | + | chr1.3:73434609-73434628 | MS.gene029609:intron | 50.0% | |
| TTCAGAGCAAGGGTAACCAG+CGG | - | chr1.3:73429635-73429654 | None:intergenic | 50.0% | |
| ! | AAGGTACCTTTGCGGATCAC+TGG | - | chr1.3:73434618-73434637 | None:intergenic | 50.0% |
| !!! | AGCACTTTTGGGATTGGAGC+TGG | + | chr1.3:73431857-73431876 | MS.gene029609:intron | 50.0% |
| ACTTTGTAGGGACGGGGGTT+GGG | + | chr1.3:73433809-73433828 | MS.gene029609:intron | 55.0% | |
| AGGCCATGGAGAAGCAGAAC+CGG | - | chr1.3:73429881-73429900 | None:intergenic | 55.0% | |
| CACGTGTCGTACGAGTGTCA+TGG | + | chr1.3:73433242-73433261 | MS.gene029609:intron | 55.0% | |
| GACACTCGTACGACACGTGT+CGG | - | chr1.3:73433241-73433260 | None:intergenic | 55.0% | |
| GCAGTTCCTTGAGTGTGTGC+TGG | - | chr1.3:73434788-73434807 | None:intergenic | 55.0% | |
| GGAGTGAGCGATGTTTCCGA+AGG | - | chr1.3:73429551-73429570 | None:intergenic | 55.0% | |
| GGCTTCATCCTTGCGGATCA+AGG | + | chr1.3:73430703-73430722 | MS.gene029609:CDS | 55.0% | |
| TCAGAGCAAGGGTAACCAGC+GGG | - | chr1.3:73429634-73429653 | None:intergenic | 55.0% | |
| TTGCTTCAACGAGTCACGCG+TGG | + | chr1.3:73433486-73433505 | MS.gene029609:CDS | 55.0% | |
| ! | TACGAGTGTCATGGGAGTGC+CGG | + | chr1.3:73433251-73433270 | MS.gene029609:intron | 55.0% |
| !! | CTCTAGGACTAGACGTGTCG+CGG | - | chr1.3:73433280-73433299 | None:intergenic | 55.0% |
| !! | TAGGTGTCGGATACCGGTCT+AGG | + | chr1.3:73433162-73433181 | MS.gene029609:intron | 55.0% |
| ACTAGACGTGTCGCGGTGTC+CGG | - | chr1.3:73433273-73433292 | None:intergenic | 60.0% | |
| ACTGCCATCCACACCTGAGG+TGG | + | chr1.3:73434803-73434822 | MS.gene029609:CDS | 60.0% | |
| ATCGCTCACTCCTTCGACGG+CGG | + | chr1.3:73429559-73429578 | MS.gene029609:CDS | 60.0% | |
| CCATGGAGAAGCAGAACCGG+AGG | - | chr1.3:73429878-73429897 | None:intergenic | 60.0% | |
| CCTCCGGTTCTGCTTCTCCA+TGG | + | chr1.3:73429875-73429894 | MS.gene029609:CDS | 60.0% | |
| CGCGACACGTCTAGTCCTAG+AGG | + | chr1.3:73433278-73433297 | MS.gene029609:intron | 60.0% | |
| CGTGGAACACGTTGGAGCCA+TGG | + | chr1.3:73430751-73430770 | MS.gene029609:CDS | 60.0% | |
| CTTTGTAGGGACGGGGGTTG+GGG | + | chr1.3:73433810-73433829 | MS.gene029609:intron | 60.0% | |
| GACTTTGTAGGGACGGGGGT+TGG | + | chr1.3:73433808-73433827 | MS.gene029609:intron | 60.0% | |
| GGAACTGCCATCCACACCTG+AGG | + | chr1.3:73434800-73434819 | MS.gene029609:CDS | 60.0% | |
| TTTGTAGGGACGGGGGTTGG+GGG | + | chr1.3:73433811-73433830 | MS.gene029609:intron | 60.0% | |
| ! | GGGTGCGCTGCCGCCGTCGA+AGG | - | chr1.3:73429572-73429591 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 73429508 | 73434941 | 73429508 | ID=MS.gene029609 |
| chr1.3 | mRNA | 73429508 | 73434941 | 73429508 | ID=MS.gene029609.t1;Parent=MS.gene029609 |
| chr1.3 | exon | 73429508 | 73429660 | 73429508 | ID=MS.gene029609.t1.exon1;Parent=MS.gene029609.t1 |
| chr1.3 | CDS | 73429508 | 73429660 | 73429508 | ID=cds.MS.gene029609.t1;Parent=MS.gene029609.t1 |
| chr1.3 | exon | 73429770 | 73429907 | 73429770 | ID=MS.gene029609.t1.exon2;Parent=MS.gene029609.t1 |
| chr1.3 | CDS | 73429770 | 73429907 | 73429770 | ID=cds.MS.gene029609.t1;Parent=MS.gene029609.t1 |
| chr1.3 | exon | 73430661 | 73430801 | 73430661 | ID=MS.gene029609.t1.exon3;Parent=MS.gene029609.t1 |
| chr1.3 | CDS | 73430661 | 73430801 | 73430661 | ID=cds.MS.gene029609.t1;Parent=MS.gene029609.t1 |
| chr1.3 | exon | 73431859 | 73431969 | 73431859 | ID=MS.gene029609.t1.exon4;Parent=MS.gene029609.t1 |
| chr1.3 | CDS | 73431859 | 73431969 | 73431859 | ID=cds.MS.gene029609.t1;Parent=MS.gene029609.t1 |
| chr1.3 | exon | 73432057 | 73432200 | 73432057 | ID=MS.gene029609.t1.exon5;Parent=MS.gene029609.t1 |
| chr1.3 | CDS | 73432057 | 73432200 | 73432057 | ID=cds.MS.gene029609.t1;Parent=MS.gene029609.t1 |
| chr1.3 | exon | 73432286 | 73432326 | 73432286 | ID=MS.gene029609.t1.exon6;Parent=MS.gene029609.t1 |
| chr1.3 | CDS | 73432286 | 73432326 | 73432286 | ID=cds.MS.gene029609.t1;Parent=MS.gene029609.t1 |
| chr1.3 | exon | 73432437 | 73432513 | 73432437 | ID=MS.gene029609.t1.exon7;Parent=MS.gene029609.t1 |
| chr1.3 | CDS | 73432437 | 73432513 | 73432437 | ID=cds.MS.gene029609.t1;Parent=MS.gene029609.t1 |
| chr1.3 | exon | 73433476 | 73433571 | 73433476 | ID=MS.gene029609.t1.exon8;Parent=MS.gene029609.t1 |
| chr1.3 | CDS | 73433476 | 73433571 | 73433476 | ID=cds.MS.gene029609.t1;Parent=MS.gene029609.t1 |
| chr1.3 | exon | 73434619 | 73434941 | 73434619 | ID=MS.gene029609.t1.exon9;Parent=MS.gene029609.t1 |
| chr1.3 | CDS | 73434619 | 73434941 | 73434619 | ID=cds.MS.gene029609.t1;Parent=MS.gene029609.t1 |
| Gene Sequence |
| Protein sequence |
