Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040721.t1 | XP_024631914.1 | 83.7 | 245 | 28 | 2 | 1 | 234 | 1 | 244 | 5.90E-109 | 403.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040721.t1 | Q67Z52 | 59.6 | 245 | 86 | 2 | 1 | 234 | 1 | 243 | 1.4e-77 | 290.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040721.t1 | A0A072VI47 | 84.4 | 243 | 29 | 2 | 1 | 234 | 1 | 243 | 9.5e-109 | 402.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72831 | MS.gene040721 | PPI |
| MS.gene84986 | MS.gene040721 | PPI |
| MS.gene040721 | MS.gene045185 | PPI |
| MS.gene028080 | MS.gene040721 | PPI |
| MS.gene028078 | MS.gene040721 | PPI |
| MS.gene070084 | MS.gene040721 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040721.t1 | MTR_1g051215 | 84.362 | 243 | 29 | 2 | 1 | 234 | 1 | 243 | 1.70e-145 | 406 |
| MS.gene040721.t1 | MTR_0004s0600 | 84.362 | 243 | 29 | 2 | 1 | 234 | 1 | 243 | 5.76e-144 | 402 |
| MS.gene040721.t1 | MTR_0004s0600 | 81.951 | 205 | 28 | 2 | 1 | 196 | 1 | 205 | 8.04e-114 | 324 |
| MS.gene040721.t1 | MTR_1g051215 | 76.250 | 160 | 29 | 2 | 1 | 151 | 1 | 160 | 1.77e-77 | 231 |
| MS.gene040721.t1 | MTR_0004s0600 | 77.019 | 161 | 28 | 2 | 1 | 152 | 1 | 161 | 2.24e-76 | 228 |
| MS.gene040721.t1 | MTR_0004s0600 | 76.875 | 160 | 28 | 2 | 1 | 151 | 1 | 160 | 2.77e-76 | 228 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040721.t1 | AT3G10220 | 59.200 | 250 | 79 | 2 | 1 | 234 | 1 | 243 | 4.83e-101 | 293 |
Find 64 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCACTGGGTCCTGGTTTC+TGG | -0.038978 | 1.2:-34627104 | MS.gene040721:CDS |
| TGGTTATGTTGCAGGGTTAA+AGG | 0.240057 | 1.2:-34626897 | MS.gene040721:intron |
| GGATTCTATTCTCCCTTTGA+TGG | 0.273533 | 1.2:-34630047 | MS.gene040721:CDS |
| ACCACTGGGTCCTGGTTTCT+GGG | 0.303718 | 1.2:-34627103 | MS.gene040721:CDS |
| TCTTCAAAGGGATCTCGTTC+AGG | 0.312869 | 1.2:+34626277 | None:intergenic |
| CAGACACTTTCAGAAAATAT+AGG | 0.347489 | 1.2:-34629718 | MS.gene040721:CDS |
| AGAATAGAATCCAAGGAGTT+TGG | 0.355776 | 1.2:+34630058 | None:intergenic |
| AGACACTTTCAGAAAATATA+GGG | 0.357903 | 1.2:-34629717 | MS.gene040721:CDS |
| CAACAAACCTTCACTTTCTC+CGG | 0.363839 | 1.2:+34626828 | None:intergenic |
| AGAGGTGTTGTAAAATTTGT+TGG | 0.372773 | 1.2:-34627135 | MS.gene040721:CDS |
| TATTCCTTGTGGACTGTGGC+AGG | 0.390898 | 1.2:-34629954 | MS.gene040721:intron |
| CTGGGTCCTGGTTTCTGGGT+TGG | 0.405572 | 1.2:-34627099 | MS.gene040721:CDS |
| CCCAGGTTCAACTTCACATC+TGG | 0.407312 | 1.2:+34627164 | None:intergenic |
| TGTTGGTCAGGCAGAACCAC+TGG | 0.421716 | 1.2:-34627118 | MS.gene040721:CDS |
| GATTCTATTCTCCCTTTGAT+GGG | 0.422721 | 1.2:-34630046 | MS.gene040721:CDS |
| TGTAGGGAGAAGCGAATGTC+GGG | 0.428062 | 1.2:+34630200 | None:intergenic |
| CAAATTTCATCCTCTTCAAA+GGG | 0.428775 | 1.2:+34626265 | None:intergenic |
| TGTTGTAAAATTTGTTGGTC+AGG | 0.432361 | 1.2:-34627130 | MS.gene040721:CDS |
| TCAAATTTCATCCTCTTCAA+AGG | 0.435903 | 1.2:+34626264 | None:intergenic |
| TCTGATCATTCCAAACTCCT+TGG | 0.460231 | 1.2:-34630068 | MS.gene040721:CDS |
| CTGCTTCCACTGTGAGCTGT+AGG | 0.469763 | 1.2:+34630183 | None:intergenic |
| TCCAGATGTGAAGTTGAACC+TGG | 0.472716 | 1.2:-34627165 | MS.gene040721:CDS |
| ATGTCTTCCATGTCGGTGTC+TGG | 0.476415 | 1.2:+34629161 | None:intergenic |
| CCCCGTGAGATGGAGGGCAT+TGG | 0.480468 | 1.2:+34626862 | None:intergenic |
| TCCAATGCCCTCCATCTCAC+GGG | 0.481585 | 1.2:-34626863 | MS.gene040721:CDS |
| CAGGCAGAACCACTGGGTCC+TGG | 0.482742 | 1.2:-34627111 | MS.gene040721:CDS |
| AGTTCAATATGATGAACCCT+TGG | 0.490948 | 1.2:-34627076 | MS.gene040721:CDS |
| TTCCAATGCCCTCCATCTCA+CGG | 0.492381 | 1.2:-34626864 | MS.gene040721:CDS |
| ATGAGTAACGCGCAATAGTA+CGG | 0.499753 | 1.2:+34630244 | None:intergenic |
| GAAGTTCGTCGTAGAGTTCG+AGG | 0.515817 | 1.2:+34630111 | None:intergenic |
| ACCTTTGCCTCAATAGTCGA+TGG | 0.516172 | 1.2:+34629674 | None:intergenic |
| CTTCAAAGGGATCTCGTTCA+GGG | 0.516796 | 1.2:+34626278 | None:intergenic |
| AAAGTAACTAACCCATCAAA+GGG | 0.532839 | 1.2:+34630035 | None:intergenic |
| GAAAGTAACTAACCCATCAA+AGG | 0.536258 | 1.2:+34630034 | None:intergenic |
| AAGCAGTCAAGGACAAGCTA+TGG | 0.547974 | 1.2:-34630166 | MS.gene040721:CDS |
| ATGCCATCATGTTTGCCCAA+GGG | 0.554485 | 1.2:+34627060 | None:intergenic |
| AGACATCTGTGCTAATATCA+AGG | 0.558662 | 1.2:-34629144 | MS.gene040721:intron |
| GTTCAATATGATGAACCCTT+GGG | 0.561068 | 1.2:-34627075 | MS.gene040721:CDS |
| GCATGCTCCATCGACTATTG+AGG | 0.561949 | 1.2:-34629681 | MS.gene040721:CDS |
| TTTGGAATGATCAGAGAGAT+CGG | 0.567068 | 1.2:+34630076 | None:intergenic |
| CATGCCATCATGTTTGCCCA+AGG | 0.569189 | 1.2:+34627059 | None:intergenic |
| CAAAGGGAGAATAGAATCCA+AGG | 0.573957 | 1.2:+34630051 | None:intergenic |
| CTGTAGGGAGAAGCGAATGT+CGG | 0.583436 | 1.2:+34630199 | None:intergenic |
| TCCATCGACTATTGAGGCAA+AGG | 0.585998 | 1.2:-34629675 | MS.gene040721:intron |
| TGAACGAGATCCCTTTGAAG+AGG | 0.587336 | 1.2:-34626275 | MS.gene040721:CDS |
| TGCTTCCACTGTGAGCTGTA+GGG | 0.587893 | 1.2:+34630184 | None:intergenic |
| TCGAGCTTACAGAAAATCGA+AGG | 0.592782 | 1.2:-34630275 | MS.gene040721:CDS |
| CCAGATGTGAAGTTGAACCT+GGG | 0.600274 | 1.2:-34627164 | MS.gene040721:CDS |
| TGAACTCCAACCCAGAAACC+AGG | 0.600462 | 1.2:+34627093 | None:intergenic |
| GAACCCTTGGGCAAACATGA+TGG | 0.602450 | 1.2:-34627063 | MS.gene040721:CDS |
| GTTGGTCAGGCAGAACCACT+GGG | 0.607685 | 1.2:-34627117 | MS.gene040721:CDS |
| GCTCACAGTGGAAGCAGTCA+AGG | 0.607991 | 1.2:-34630177 | MS.gene040721:CDS |
| AGCACAGATGTCTTCCATGT+CGG | 0.615217 | 1.2:+34629154 | None:intergenic |
| CCAATGCCCTCCATCTCACG+GGG | 0.624429 | 1.2:-34626862 | MS.gene040721:CDS |
| AACTAGGCCGGAGAAAGTGA+AGG | 0.625495 | 1.2:-34626835 | MS.gene040721:intron |
| GAAACCTGCCACAGTCCACA+AGG | 0.636722 | 1.2:+34629950 | None:intergenic |
| CGAGCTTACAGAAAATCGAA+GGG | 0.636838 | 1.2:-34630274 | MS.gene040721:CDS |
| GCAGACACCAGACACCGACA+TGG | 0.669874 | 1.2:-34629168 | MS.gene040721:intron |
| CAGATGTGAAGTTGAACCTG+GGG | 0.671920 | 1.2:-34627163 | MS.gene040721:CDS |
| ACCCAGAAACCAGGACCCAG+TGG | 0.679557 | 1.2:+34627102 | None:intergenic |
| GTAGGGAGAAGCGAATGTCG+GGG | 0.710139 | 1.2:+34630201 | None:intergenic |
| GAGCTTACAGAAAATCGAAG+GGG | 0.735570 | 1.2:-34630273 | MS.gene040721:CDS |
| CAATGCCCTCCATCTCACGG+GGG | 0.747248 | 1.2:-34626861 | MS.gene040721:CDS |
| CTTCTCCCTACAGCTCACAG+TGG | 0.754510 | 1.2:-34630189 | MS.gene040721:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAAATGATGTAAAAAA+AGG | - | chr1.2:34627067-34627086 | MS.gene040721:CDS | 10.0% |
| !! | TAAATAGTCACTATAAAATA+AGG | + | chr1.2:34630032-34630051 | None:intergenic | 15.0% |
| !!! | AATTTTTCTAAACTTGTAAA+TGG | - | chr1.2:34630116-34630135 | MS.gene040721:CDS | 15.0% |
| !!! | GTTTTGATGAAATATAATTA+AGG | - | chr1.2:34628667-34628686 | MS.gene040721:intron | 15.0% |
| !!! | TTTTTCCTTTTATTTTTATC+AGG | + | chr1.2:34629798-34629817 | None:intergenic | 15.0% |
| !!! | TTTTTTTATAAATTCTTTCC+AGG | - | chr1.2:34630234-34630253 | MS.gene040721:CDS | 15.0% |
| !!! | TTTTTTTTATTTGTGAAAAC+TGG | - | chr1.2:34626764-34626783 | MS.gene040721:intron | 15.0% |
| !! | AAAAAACAAGAAAGATTTAG+AGG | - | chr1.2:34628909-34628928 | MS.gene040721:intron | 20.0% |
| !! | AAAAACAAGAAAGATTTAGA+GGG | - | chr1.2:34628910-34628929 | MS.gene040721:intron | 20.0% |
| !! | AAAAAGCCTTCATATAATAT+GGG | - | chr1.2:34628435-34628454 | MS.gene040721:intron | 20.0% |
| !! | AATAAATATTCAAGTAACTG+AGG | + | chr1.2:34629123-34629142 | None:intergenic | 20.0% |
| !! | AATTTCCAAAATATTAAGGT+AGG | - | chr1.2:34629356-34629375 | MS.gene040721:intron | 20.0% |
| !! | GAAAAATATTCTGATACTAA+AGG | + | chr1.2:34629759-34629778 | None:intergenic | 20.0% |
| !! | TTAAATCCCATATTATATGA+AGG | + | chr1.2:34628444-34628463 | None:intergenic | 20.0% |
| !!! | AAAAGCGTAAAGTATTTATT+AGG | - | chr1.2:34628367-34628386 | MS.gene040721:intron | 20.0% |
| !!! | ATCAGAATATTTTTCATTCA+TGG | - | chr1.2:34629764-34629783 | MS.gene040721:intron | 20.0% |
| !!! | GTATAGTTTTCAAAGTTATA+AGG | - | chr1.2:34627490-34627509 | MS.gene040721:intron | 20.0% |
| !!! | TAAAGTAACTCTAAGAATAT+TGG | + | chr1.2:34628203-34628222 | None:intergenic | 20.0% |
| !!! | TACCTTAATATTTTGGAAAT+TGG | + | chr1.2:34629357-34629376 | None:intergenic | 20.0% |
| !!! | TTTATTTTAAATAGAGACCA+AGG | - | chr1.2:34628857-34628876 | MS.gene040721:intron | 20.0% |
| !!! | TTTTCAAAGTTATAAGGTTT+AGG | - | chr1.2:34627496-34627515 | MS.gene040721:intron | 20.0% |
| !!! | TTTTGCCTGATAAAAATAAA+AGG | - | chr1.2:34629790-34629809 | MS.gene040721:intron | 20.0% |
| !!! | TTTTTACTTTTTATTCCTTG+TGG | - | chr1.2:34626580-34626599 | MS.gene040721:intron | 20.0% |
| ! | AAAAAAAGTTGTGTTGAATG+AGG | + | chr1.2:34626751-34626770 | None:intergenic | 25.0% |
| ! | AAAACAAGAAAGATTTAGAG+GGG | - | chr1.2:34628911-34628930 | MS.gene040721:intron | 25.0% |
| ! | AAGATACATATTTGAGCTTA+TGG | + | chr1.2:34627253-34627272 | None:intergenic | 25.0% |
| ! | AATAGGTTTGACTAAAGATA+TGG | - | chr1.2:34629071-34629090 | MS.gene040721:intron | 25.0% |
| ! | AATATGTCTATTACTTGACA+TGG | - | chr1.2:34627299-34627318 | MS.gene040721:intron | 25.0% |
| ! | AGACACTTTCAGAAAATATA+GGG | - | chr1.2:34626828-34626847 | MS.gene040721:intron | 25.0% |
| ! | AGGAGTAAAATTGAGATAAA+AGG | - | chr1.2:34627109-34627128 | MS.gene040721:CDS | 25.0% |
| ! | ATAGTCACTATAAAATAAGG+TGG | + | chr1.2:34630029-34630048 | None:intergenic | 25.0% |
| ! | ATATGTCTATTACTTGACAT+GGG | - | chr1.2:34627300-34627319 | MS.gene040721:intron | 25.0% |
| ! | CAAAAAGCCTTCATATAATA+TGG | - | chr1.2:34628434-34628453 | MS.gene040721:intron | 25.0% |
| ! | CATGAAGATATTTAAGAAGA+AGG | - | chr1.2:34627662-34627681 | MS.gene040721:intron | 25.0% |
| ! | CTCCAATTTCCAAAATATTA+AGG | - | chr1.2:34629352-34629371 | MS.gene040721:intron | 25.0% |
| ! | TCTTCTTAAATATCTTCATG+TGG | + | chr1.2:34627662-34627681 | None:intergenic | 25.0% |
| ! | TTGCTAGTCATATAACAAAT+AGG | - | chr1.2:34629054-34629073 | MS.gene040721:intron | 25.0% |
| ! | TTTATAAATTCTTTCCAGGT+TGG | - | chr1.2:34630238-34630257 | MS.gene040721:CDS | 25.0% |
| !! | ATTAACTTGAATGTGTAGTT+TGG | - | chr1.2:34628935-34628954 | MS.gene040721:intron | 25.0% |
| !! | TAACTTTTGCTTGATGAATT+TGG | - | chr1.2:34628610-34628629 | MS.gene040721:intron | 25.0% |
| !! | TATTATGTTAGCAGTCTTAT+TGG | + | chr1.2:34628121-34628140 | None:intergenic | 25.0% |
| !! | TTATCAGTTTGATGATTTCA+AGG | + | chr1.2:34628584-34628603 | None:intergenic | 25.0% |
| !!! | ATTATGTTAGCAGTCTTATT+GGG | + | chr1.2:34628120-34628139 | None:intergenic | 25.0% |
| !!! | ATTGACTTGCATAAAAAAGA+TGG | + | chr1.2:34629524-34629543 | None:intergenic | 25.0% |
| !!! | CTTTCTTGTTTTTTCAAGAA+TGG | + | chr1.2:34628903-34628922 | None:intergenic | 25.0% |
| !!! | TATGAAGTTATTTTTGCTCT+TGG | + | chr1.2:34629869-34629888 | None:intergenic | 25.0% |
| !!! | TTATAAGGTTTAGGTTGATA+AGG | - | chr1.2:34627505-34627524 | MS.gene040721:intron | 25.0% |
| !!! | TTCTTTGGTTCTTTTAGTTA+TGG | - | chr1.2:34629198-34629217 | MS.gene040721:intron | 25.0% |
| AAAAACATTCAGATTCGTAC+AGG | + | chr1.2:34628985-34629004 | None:intergenic | 30.0% | |
| AAACAAGAAAGATTTAGAGG+GGG | - | chr1.2:34628912-34628931 | MS.gene040721:intron | 30.0% | |
| AAAGGAAAAATACGATGACA+AGG | - | chr1.2:34629808-34629827 | MS.gene040721:intron | 30.0% | |
| AAAGTAACTAACCCATCAAA+GGG | + | chr1.2:34626513-34626532 | None:intergenic | 30.0% | |
| ACTAATTGGATTTGTAGTGT+TGG | - | chr1.2:34627017-34627036 | MS.gene040721:intron | 30.0% | |
| ACTACTTGTTCTTCATAGTT+AGG | + | chr1.2:34628289-34628308 | None:intergenic | 30.0% | |
| ACTTATCCTAGTACAAAATC+AGG | - | chr1.2:34626907-34626926 | MS.gene040721:intron | 30.0% | |
| AGAAAACTACACATGATTGA+AGG | + | chr1.2:34629182-34629201 | None:intergenic | 30.0% | |
| AGAAATTTGAATGAAGTCGT+GGG | - | chr1.2:34627588-34627607 | MS.gene040721:intron | 30.0% | |
| ATTTAGTACAACAAAAGAGC+TGG | - | chr1.2:34628645-34628664 | MS.gene040721:intron | 30.0% | |
| ATTTATCTCAGAATTTCCCT+TGG | - | chr1.2:34629628-34629647 | MS.gene040721:intron | 30.0% | |
| CAAATTTCATCCTCTTCAAA+GGG | + | chr1.2:34630283-34630302 | None:intergenic | 30.0% | |
| CAGACACTTTCAGAAAATAT+AGG | - | chr1.2:34626827-34626846 | MS.gene040721:intron | 30.0% | |
| CATAAATGAAAAAGTCATCG+TGG | + | chr1.2:34628775-34628794 | None:intergenic | 30.0% | |
| CTCTTGAAATTACAAGGATT+TGG | - | chr1.2:34627928-34627947 | MS.gene040721:intron | 30.0% | |
| GAATGAATGAAACGAGTATT+TGG | - | chr1.2:34628808-34628827 | MS.gene040721:intron | 30.0% | |
| GGTTAGATTGATAGGAAATT+TGG | - | chr1.2:34627563-34627582 | MS.gene040721:intron | 30.0% | |
| GTAATTTCAAGAGAGAGAAA+AGG | + | chr1.2:34627921-34627940 | None:intergenic | 30.0% | |
| GTGTATTCAATTAAGATTGC+AGG | - | chr1.2:34627089-34627108 | MS.gene040721:CDS | 30.0% | |
| TAACTATGAAGAACAAGTAG+TGG | - | chr1.2:34628288-34628307 | MS.gene040721:intron | 30.0% | |
| TACAGCACAATACTAGATTT+GGG | + | chr1.2:34629913-34629932 | None:intergenic | 30.0% | |
| TACGAGCATAATTGTTGTAT+AGG | - | chr1.2:34627459-34627478 | MS.gene040721:intron | 30.0% | |
| TAGAAATTTGAATGAAGTCG+TGG | - | chr1.2:34627587-34627606 | MS.gene040721:intron | 30.0% | |
| TAGTGGAAGTTAGTTATACA+GGG | - | chr1.2:34627715-34627734 | MS.gene040721:intron | 30.0% | |
| TCAAATTTCATCCTCTTCAA+AGG | + | chr1.2:34630284-34630303 | None:intergenic | 30.0% | |
| TCGTTTCATTCATTCTTCAA+GGG | + | chr1.2:34628803-34628822 | None:intergenic | 30.0% | |
| TGCTTATTGCATCTAATTCA+TGG | + | chr1.2:34628489-34628508 | None:intergenic | 30.0% | |
| TTACCAAACAAACGCTTATT+GGG | - | chr1.2:34627271-34627290 | MS.gene040721:intron | 30.0% | |
| TTCTCTCTCTTGAAATTACA+AGG | - | chr1.2:34627922-34627941 | MS.gene040721:intron | 30.0% | |
| TTGAAATTACAAGGATTTGG+TGG | - | chr1.2:34627931-34627950 | MS.gene040721:intron | 30.0% | |
| TTGATCGACATTACAATAAC+AGG | + | chr1.2:34629284-34629303 | None:intergenic | 30.0% | |
| TTGCGGATAATCTAACTAAT+TGG | - | chr1.2:34627003-34627022 | MS.gene040721:intron | 30.0% | |
| ! | AAACGAGTATTTGGTTAGTT+TGG | - | chr1.2:34628817-34628836 | MS.gene040721:intron | 30.0% |
| ! | AACTAGCTTATAACTGATTG+CGG | - | chr1.2:34626986-34627005 | MS.gene040721:intron | 30.0% |
| ! | AAGTTAGCTTACAAATGTCA+AGG | - | chr1.2:34628176-34628195 | MS.gene040721:intron | 30.0% |
| ! | AGCGTAAAGTATTTATTAGG+TGG | - | chr1.2:34628370-34628389 | MS.gene040721:intron | 30.0% |
| ! | CAATCATGTGTAGTTTTCTT+TGG | - | chr1.2:34629183-34629202 | MS.gene040721:intron | 30.0% |
| ! | CATCTGTTAAACTAGCTTAT+CGG | + | chr1.2:34626959-34626978 | None:intergenic | 30.0% |
| ! | CTTTACGCTTTTGTAATACT+TGG | + | chr1.2:34628359-34628378 | None:intergenic | 30.0% |
| ! | TGGATCCTACCTTAATATTT+TGG | + | chr1.2:34629364-34629383 | None:intergenic | 30.0% |
| ! | TTCAGAGAATATTTTCTCTG+CGG | - | chr1.2:34627793-34627812 | MS.gene040721:intron | 30.0% |
| ! | TTTTTAGATGCATCGTGAAT+TGG | - | chr1.2:34629141-34629160 | MS.gene040721:intron | 30.0% |
| !! | AGAGGTGTTGTAAAATTTGT+TGG | - | chr1.2:34629410-34629429 | MS.gene040721:intron | 30.0% |
| !! | AGTTTTGCTTTGCTGTAAAA+GGG | - | chr1.2:34629236-34629255 | MS.gene040721:intron | 30.0% |
| !! | GCTTTGTTTGGTAAAAATAG+CGG | - | chr1.2:34626929-34626948 | MS.gene040721:intron | 30.0% |
| !! | GGAAATTCTGAGATAAATGT+AGG | + | chr1.2:34629626-34629645 | None:intergenic | 30.0% |
| !! | TGTTGTAAAATTTGTTGGTC+AGG | - | chr1.2:34629415-34629434 | MS.gene040721:intron | 30.0% |
| !! | TTATGTTAGCAGTCTTATTG+GGG | + | chr1.2:34628119-34628138 | None:intergenic | 30.0% |
| !! | TTGTAGTGTTGGTTATTTAG+CGG | - | chr1.2:34627028-34627047 | MS.gene040721:intron | 30.0% |
| !!! | ACGAATCTGAATGTTTTTAG+CGG | - | chr1.2:34628987-34629006 | MS.gene040721:intron | 30.0% |
| !!! | CGTGAATTGGACTTATTTTT+TGG | - | chr1.2:34629154-34629173 | MS.gene040721:CDS | 30.0% |
| !!! | GTTTTAGTCTTATGTTAAGC+AGG | + | chr1.2:34629837-34629856 | None:intergenic | 30.0% |
| AAATGCGAGGTTAGATTGAT+AGG | - | chr1.2:34627555-34627574 | MS.gene040721:intron | 35.0% | |
| AAGATACAATGAGCAATACG+AGG | - | chr1.2:34627974-34627993 | MS.gene040721:intron | 35.0% | |
| AAGATACAATGCAAAATGCG+AGG | - | chr1.2:34627542-34627561 | MS.gene040721:intron | 35.0% | |
| AAGGTAATAGGCCTAATTTG+TGG | - | chr1.2:34627628-34627647 | MS.gene040721:intron | 35.0% | |
| AAGTTAGTTATACAGGGATG+TGG | - | chr1.2:34627721-34627740 | MS.gene040721:intron | 35.0% | |
| AATTCTGTCATAGTGAGGTA+AGG | - | chr1.2:34627767-34627786 | MS.gene040721:intron | 35.0% | |
| ACTTGAATGTGTAGTTTGGA+TGG | - | chr1.2:34628939-34628958 | MS.gene040721:intron | 35.0% | |
| AGAATAGAATCCAAGGAGTT+TGG | + | chr1.2:34626490-34626509 | None:intergenic | 35.0% | |
| AGACATCTGTGCTAATATCA+AGG | - | chr1.2:34627401-34627420 | MS.gene040721:intron | 35.0% | |
| AGGTAAACTAGACTTGCATA+AGG | + | chr1.2:34628251-34628270 | None:intergenic | 35.0% | |
| AGTTCAATATGATGAACCCT+TGG | - | chr1.2:34629469-34629488 | MS.gene040721:intron | 35.0% | |
| ATGGTTGGAAGATACTTCTT+TGG | - | chr1.2:34626664-34626683 | MS.gene040721:intron | 35.0% | |
| CTAGTGGAAGTTAGTTATAC+AGG | - | chr1.2:34627714-34627733 | MS.gene040721:intron | 35.0% | |
| CTCGTTTCATTCATTCTTCA+AGG | + | chr1.2:34628804-34628823 | None:intergenic | 35.0% | |
| CTTACCAAACAAACGCTTAT+TGG | - | chr1.2:34627270-34627289 | MS.gene040721:intron | 35.0% | |
| CTTGAATGTGTAGTTTGGAT+GGG | - | chr1.2:34628940-34628959 | MS.gene040721:intron | 35.0% | |
| GAAAGTAACTAACCCATCAA+AGG | + | chr1.2:34626514-34626533 | None:intergenic | 35.0% | |
| GACAAGCTATGGAAAAAATG+TGG | - | chr1.2:34626390-34626409 | MS.gene040721:intron | 35.0% | |
| GATTCTATTCTCCCTTTGAT+GGG | - | chr1.2:34626499-34626518 | MS.gene040721:intron | 35.0% | |
| GGTAAACTAGACTTGCATAA+GGG | + | chr1.2:34628250-34628269 | None:intergenic | 35.0% | |
| GTACAGCACAATACTAGATT+TGG | + | chr1.2:34629914-34629933 | None:intergenic | 35.0% | |
| GTTCAATATGATGAACCCTT+GGG | - | chr1.2:34629470-34629489 | MS.gene040721:intron | 35.0% | |
| TCGCTTATTATAGGCTTCTT+CGG | + | chr1.2:34626708-34626727 | None:intergenic | 35.0% | |
| TGATGAATTCTGTCATAGTG+AGG | - | chr1.2:34627762-34627781 | MS.gene040721:intron | 35.0% | |
| TGATGATTTCAAGGACAATC+AGG | + | chr1.2:34628575-34628594 | None:intergenic | 35.0% | |
| TGGGATTTAAAAACCATAGC+AGG | - | chr1.2:34628454-34628473 | MS.gene040721:intron | 35.0% | |
| TGTTCTGTGAAGAAATGTTC+AGG | + | chr1.2:34628327-34628346 | None:intergenic | 35.0% | |
| TTTCAAGAGAGAGAAAAGGA+TGG | + | chr1.2:34627917-34627936 | None:intergenic | 35.0% | |
| TTTCTTCACAGAACATGTCA+AGG | - | chr1.2:34628332-34628351 | MS.gene040721:intron | 35.0% | |
| ! | AATGGACACTTTCACTGATT+TGG | - | chr1.2:34627344-34627363 | MS.gene040721:intron | 35.0% |
| ! | ACAAAGCCTGATTTTGTACT+AGG | + | chr1.2:34626916-34626935 | None:intergenic | 35.0% |
| ! | ACTAGATTTGGGATAAGAGT+AGG | + | chr1.2:34629902-34629921 | None:intergenic | 35.0% |
| ! | GTAAGCTAACTTGTAGATGT+AGG | + | chr1.2:34628168-34628187 | None:intergenic | 35.0% |
| ! | TTTGGAATGATCAGAGAGAT+CGG | + | chr1.2:34626472-34626491 | None:intergenic | 35.0% |
| !! | ATATACTTTTTGCCACCATC+TGG | + | chr1.2:34630161-34630180 | None:intergenic | 35.0% |
| !! | CAGTTTTGCTTTGCTGTAAA+AGG | - | chr1.2:34629235-34629254 | MS.gene040721:intron | 35.0% |
| !! | GTACAAAATCAGGCTTTGTT+TGG | - | chr1.2:34626917-34626936 | MS.gene040721:intron | 35.0% |
| !! | TAAGGTTTAGGTTGATAAGG+AGG | - | chr1.2:34627508-34627527 | MS.gene040721:intron | 35.0% |
| !! | TTACAAGGATTTGGTGGATA+AGG | - | chr1.2:34627937-34627956 | MS.gene040721:intron | 35.0% |
| !! | TTAGGTTTGATTTGAGCAGA+AGG | + | chr1.2:34628271-34628290 | None:intergenic | 35.0% |
| !! | TTTTTATTCCTTGTGGACTG+TGG | - | chr1.2:34626587-34626606 | MS.gene040721:intron | 35.0% |
| AATAGAGACCAAGGAAGAGA+AGG | - | chr1.2:34628866-34628885 | MS.gene040721:intron | 40.0% | |
| AGCACACAATAGCTAAAAGC+AGG | + | chr1.2:34629576-34629595 | None:intergenic | 40.0% | |
| ATGAAGAACAAGTAGTGGCA+CGG | - | chr1.2:34628293-34628312 | MS.gene040721:intron | 40.0% | |
| ATGAGTAACGCGCAATAGTA+CGG | + | chr1.2:34626304-34626323 | None:intergenic | 40.0% | |
| ATGGTTACTCTTTCCTGCTA+TGG | + | chr1.2:34628470-34628489 | None:intergenic | 40.0% | |
| ATTTCCCTTGGTTATGTTGC+AGG | - | chr1.2:34629640-34629659 | MS.gene040721:intron | 40.0% | |
| CAAAGGGAGAATAGAATCCA+AGG | + | chr1.2:34626497-34626516 | None:intergenic | 40.0% | |
| CAACAAACCTTCACTTTCTC+CGG | + | chr1.2:34629720-34629739 | None:intergenic | 40.0% | |
| CGAGCTTACAGAAAATCGAA+GGG | - | chr1.2:34626271-34626290 | MS.gene040721:CDS | 40.0% | |
| GAAGAAGCCTATAATAAGCG+AGG | - | chr1.2:34626707-34626726 | MS.gene040721:intron | 40.0% | |
| GAGCTTACAGAAAATCGAAG+GGG | - | chr1.2:34626272-34626291 | MS.gene040721:CDS | 40.0% | |
| GCTAAAAGCAGGAATTAGCA+TGG | + | chr1.2:34629565-34629584 | None:intergenic | 40.0% | |
| GGATTCTATTCTCCCTTTGA+TGG | - | chr1.2:34626498-34626517 | MS.gene040721:intron | 40.0% | |
| GTAATGTCGATCAATTCGTC+TGG | - | chr1.2:34629290-34629309 | MS.gene040721:intron | 40.0% | |
| GTGTTGAATGAGGTGATAGA+GGG | + | chr1.2:34626741-34626760 | None:intergenic | 40.0% | |
| GTTGGAAGATACTTCTTTGG+TGG | - | chr1.2:34626667-34626686 | MS.gene040721:intron | 40.0% | |
| TAACCCTGCAACATAACCAA+GGG | + | chr1.2:34629647-34629666 | None:intergenic | 40.0% | |
| TCGAGCTTACAGAAAATCGA+AGG | - | chr1.2:34626270-34626289 | MS.gene040721:CDS | 40.0% | |
| TCTGATCATTCCAAACTCCT+TGG | - | chr1.2:34626477-34626496 | MS.gene040721:intron | 40.0% | |
| TGAGTCCAGATGAAGGTAAT+AGG | - | chr1.2:34627616-34627635 | MS.gene040721:intron | 40.0% | |
| TGGTTATGTTGCAGGGTTAA+AGG | - | chr1.2:34629648-34629667 | MS.gene040721:intron | 40.0% | |
| TGTGTTGAATGAGGTGATAG+AGG | + | chr1.2:34626742-34626761 | None:intergenic | 40.0% | |
| TTAACCCTGCAACATAACCA+AGG | + | chr1.2:34629648-34629667 | None:intergenic | 40.0% | |
| TTAGGCCTATTACCTTCATC+TGG | + | chr1.2:34627624-34627643 | None:intergenic | 40.0% | |
| TTTCCCTTGGTTATGTTGCA+GGG | - | chr1.2:34629641-34629660 | MS.gene040721:intron | 40.0% | |
| ! | AGAGAATATTTTCTCTGCGG+TGG | - | chr1.2:34627796-34627815 | MS.gene040721:intron | 40.0% |
| ! | GAGAATATTTTCTCTGCGGT+GGG | - | chr1.2:34627797-34627816 | MS.gene040721:intron | 40.0% |
| ! | TTGGGATAAGAGTAGGCTTT+TGG | + | chr1.2:34629895-34629914 | None:intergenic | 40.0% |
| !! | ATGTCCTTGCTTTTGGGTAA+TGG | - | chr1.2:34627326-34627345 | MS.gene040721:intron | 40.0% |
| AAGCAGTCAAGGACAAGCTA+TGG | - | chr1.2:34626379-34626398 | MS.gene040721:intron | 45.0% | |
| ACCTTTGCCTCAATAGTCGA+TGG | + | chr1.2:34626874-34626893 | None:intergenic | 45.0% | |
| AGCACAGATGTCTTCCATGT+CGG | + | chr1.2:34627394-34627413 | None:intergenic | 45.0% | |
| AGCTTGGAGAAAAGGGCTTT+GGG | - | chr1.2:34629979-34629998 | MS.gene040721:CDS | 45.0% | |
| ATGCCATCATGTTTGCCCAA+GGG | + | chr1.2:34629488-34629507 | None:intergenic | 45.0% | |
| ATTCTGACTGTCACACCAGA+TGG | - | chr1.2:34630143-34630162 | MS.gene040721:CDS | 45.0% | |
| CAGATGTGAAGTTGAACCTG+GGG | - | chr1.2:34629382-34629401 | MS.gene040721:intron | 45.0% | |
| CAGGAATTAGCATGGTGAGT+TGG | + | chr1.2:34629557-34629576 | None:intergenic | 45.0% | |
| CATGACTAAAGAAAACCGCC+AGG | + | chr1.2:34627204-34627223 | None:intergenic | 45.0% | |
| CATGCCTCCTCGCTTATTAT+AGG | + | chr1.2:34626717-34626736 | None:intergenic | 45.0% | |
| CCAGATGTGAAGTTGAACCT+GGG | - | chr1.2:34629381-34629400 | MS.gene040721:intron | 45.0% | |
| CGGAGAAAGTGAAGGTTTGT+TGG | - | chr1.2:34629718-34629737 | MS.gene040721:CDS | 45.0% | |
| CTTCAAAGGGATCTCGTTCA+GGG | + | chr1.2:34630270-34630289 | None:intergenic | 45.0% | |
| GAAGCCTATAATAAGCGAGG+AGG | - | chr1.2:34626710-34626729 | MS.gene040721:intron | 45.0% | |
| GAGCCCAATAAGCGTTTGTT+TGG | + | chr1.2:34627277-34627296 | None:intergenic | 45.0% | |
| GTGTCCATTACCCAAAAGCA+AGG | + | chr1.2:34627333-34627352 | None:intergenic | 45.0% | |
| TAAGAAGAAGGATGCTGAGC+TGG | - | chr1.2:34627674-34627693 | MS.gene040721:intron | 45.0% | |
| TCAGATTCGTACAGGCTATC+TGG | + | chr1.2:34628977-34628996 | None:intergenic | 45.0% | |
| TCCAGATGTGAAGTTGAACC+TGG | - | chr1.2:34629380-34629399 | MS.gene040721:intron | 45.0% | |
| TCTTCAAAGGGATCTCGTTC+AGG | + | chr1.2:34630271-34630290 | None:intergenic | 45.0% | |
| TGATCCAGCGTCTGTTACAT+CGG | - | chr1.2:34626637-34626656 | MS.gene040721:intron | 45.0% | |
| TGGTGCACTCTCCACAAATT+AGG | + | chr1.2:34627642-34627661 | None:intergenic | 45.0% | |
| TTATTGGGGTAGGCTTGTAC+TGG | + | chr1.2:34628105-34628124 | None:intergenic | 45.0% | |
| ! | AAAAACGCTCTAAGCTCGTG+TGG | - | chr1.2:34627166-34627185 | MS.gene040721:CDS | 45.0% |
| ! | ATAAGCAAGCTGAGCACTGT+AGG | - | chr1.2:34628502-34628521 | MS.gene040721:intron | 45.0% |
| ! | TAAGCAAGCTGAGCACTGTA+GGG | - | chr1.2:34628503-34628522 | MS.gene040721:intron | 45.0% |
| ! | TCCATCGACTATTGAGGCAA+AGG | - | chr1.2:34626870-34626889 | MS.gene040721:CDS | 45.0% |
| ! | TGAACGAGATCCCTTTGAAG+AGG | - | chr1.2:34630270-34630289 | MS.gene040721:CDS | 45.0% |
| ! | TTATACAGGGATGTGGACTG+AGG | - | chr1.2:34627728-34627747 | MS.gene040721:intron | 45.0% |
| !! | GTTAGCAGTCTTATTGGGGT+AGG | + | chr1.2:34628115-34628134 | None:intergenic | 45.0% |
| !! | TAATTTATAAAATTCTAATA+TGG | - | chr1.2:34628058-34628077 | MS.gene040721:intron | 5.0% |
| AACTAGGCCGGAGAAAGTGA+AGG | - | chr1.2:34629710-34629729 | MS.gene040721:CDS | 50.0% | |
| ACCAAGGAAGAGAAGGACTG+AGG | - | chr1.2:34628873-34628892 | MS.gene040721:intron | 50.0% | |
| ATAGCAGGTGGAGAAGCTAG+TGG | - | chr1.2:34627698-34627717 | MS.gene040721:intron | 50.0% | |
| CACACACTAAGGCTCTGTTC+GGG | - | chr1.2:34629956-34629975 | MS.gene040721:CDS | 50.0% | |
| CATCTCACGGGGGAATAACT+AGG | - | chr1.2:34629694-34629713 | MS.gene040721:CDS | 50.0% | |
| CATGCCATCATGTTTGCCCA+AGG | + | chr1.2:34629489-34629508 | None:intergenic | 50.0% | |
| CCCAGGTTCAACTTCACATC+TGG | + | chr1.2:34629384-34629403 | None:intergenic | 50.0% | |
| CTAGTTATTCCCCCGTGAGA+TGG | + | chr1.2:34629696-34629715 | None:intergenic | 50.0% | |
| CTGTAGGGAGAAGCGAATGT+CGG | + | chr1.2:34626349-34626368 | None:intergenic | 50.0% | |
| GAACCCTTGGGCAAACATGA+TGG | - | chr1.2:34629482-34629501 | MS.gene040721:intron | 50.0% | |
| GAAGTTCGTCGTAGAGTTCG+AGG | + | chr1.2:34626437-34626456 | None:intergenic | 50.0% | |
| GAGCTTGGAGAAAAGGGCTT+TGG | - | chr1.2:34629978-34629997 | MS.gene040721:CDS | 50.0% | |
| GATCCAGCGTCTGTTACATC+GGG | - | chr1.2:34626638-34626657 | MS.gene040721:intron | 50.0% | |
| GCACACACTAAGGCTCTGTT+CGG | - | chr1.2:34629955-34629974 | MS.gene040721:CDS | 50.0% | |
| GCACTGTAGGGAAGATAGCT+TGG | - | chr1.2:34628515-34628534 | MS.gene040721:intron | 50.0% | |
| GCTTGGAGAAAAGGGCTTTG+GGG | - | chr1.2:34629980-34629999 | MS.gene040721:CDS | 50.0% | |
| GTGTGGAAATGACAGTTGCC+TGG | - | chr1.2:34627183-34627202 | MS.gene040721:intron | 50.0% | |
| GTTCGGGAGCTTGGAGAAAA+GGG | - | chr1.2:34629972-34629991 | MS.gene040721:CDS | 50.0% | |
| GTTGAACCTGGGGCAAAAAG+AGG | - | chr1.2:34629392-34629411 | MS.gene040721:intron | 50.0% | |
| TACCTTCATCTGGACTCAGC+TGG | + | chr1.2:34627614-34627633 | None:intergenic | 50.0% | |
| TCCTCAGTCCTTCTCTTCCT+TGG | + | chr1.2:34628877-34628896 | None:intergenic | 50.0% | |
| TGAACTCCAACCCAGAAACC+AGG | + | chr1.2:34629455-34629474 | None:intergenic | 50.0% | |
| TGCTATCTGCGCACACACTA+AGG | - | chr1.2:34629945-34629964 | MS.gene040721:intron | 50.0% | |
| TGCTTCCACTGTGAGCTGTA+GGG | + | chr1.2:34626364-34626383 | None:intergenic | 50.0% | |
| TGGAAATGACAGTTGCCTGG+CGG | - | chr1.2:34627186-34627205 | MS.gene040721:intron | 50.0% | |
| TGTAGGGAGAAGCGAATGTC+GGG | + | chr1.2:34626348-34626367 | None:intergenic | 50.0% | |
| TGTTACATCGGGTGGATGGT+TGG | - | chr1.2:34626649-34626668 | MS.gene040721:intron | 50.0% | |
| TGTTCGGGAGCTTGGAGAAA+AGG | - | chr1.2:34629971-34629990 | MS.gene040721:CDS | 50.0% | |
| TTATTCCCCCGTGAGATGGA+GGG | + | chr1.2:34629692-34629711 | None:intergenic | 50.0% | |
| TTCCAATGCCCTCCATCTCA+CGG | - | chr1.2:34629681-34629700 | MS.gene040721:CDS | 50.0% | |
| ! | ACAACACCTCTTTTTGCCCC+AGG | + | chr1.2:34629401-34629420 | None:intergenic | 50.0% |
| ! | ATGTCTTCCATGTCGGTGTC+TGG | + | chr1.2:34627387-34627406 | None:intergenic | 50.0% |
| ! | GCATGCTCCATCGACTATTG+AGG | - | chr1.2:34626864-34626883 | MS.gene040721:CDS | 50.0% |
| ! | TATTCCTTGTGGACTGTGGC+AGG | - | chr1.2:34626591-34626610 | MS.gene040721:intron | 50.0% |
| ! | TGGGCTCATGTCCTTGCTTT+TGG | - | chr1.2:34627319-34627338 | MS.gene040721:intron | 50.0% |
| !! | AGAAAAGGGCTTTGGGGAGA+GGG | - | chr1.2:34629986-34630005 | MS.gene040721:CDS | 50.0% |
| !! | GGGCTCATGTCCTTGCTTTT+GGG | - | chr1.2:34627320-34627339 | MS.gene040721:intron | 50.0% |
| AACCACTGGGTCCTGGTTTC+TGG | - | chr1.2:34629441-34629460 | MS.gene040721:intron | 55.0% | |
| ACCACTGGGTCCTGGTTTCT+GGG | - | chr1.2:34629442-34629461 | MS.gene040721:intron | 55.0% | |
| AGATAGCTTGGCGAGACAGC+TGG | - | chr1.2:34628527-34628546 | MS.gene040721:intron | 55.0% | |
| CGTCTGTTACATCGGGTGGA+TGG | - | chr1.2:34626645-34626664 | MS.gene040721:intron | 55.0% | |
| CTGACTGTCACACCAGATGG+TGG | - | chr1.2:34630146-34630165 | MS.gene040721:CDS | 55.0% | |
| CTGCTTCCACTGTGAGCTGT+AGG | + | chr1.2:34626365-34626384 | None:intergenic | 55.0% | |
| CTTCTCCCTACAGCTCACAG+TGG | - | chr1.2:34626356-34626375 | MS.gene040721:intron | 55.0% | |
| GAAACCTGCCACAGTCCACA+AGG | + | chr1.2:34626598-34626617 | None:intergenic | 55.0% | |
| GCTCACAGTGGAAGCAGTCA+AGG | - | chr1.2:34626368-34626387 | MS.gene040721:intron | 55.0% | |
| GTAGGGAGAAGCGAATGTCG+GGG | + | chr1.2:34626347-34626366 | None:intergenic | 55.0% | |
| GTCTGCCGAACCTAACCCAA+CGG | + | chr1.2:34627826-34627845 | None:intergenic | 55.0% | |
| GTTATTCCCCCGTGAGATGG+AGG | + | chr1.2:34629693-34629712 | None:intergenic | 55.0% | |
| GTTGGTCAGGCAGAACCACT+GGG | - | chr1.2:34629428-34629447 | MS.gene040721:intron | 55.0% | |
| TAAGGCTCTGTTCGGGAGCT+TGG | - | chr1.2:34629963-34629982 | MS.gene040721:CDS | 55.0% | |
| TCACGGGGGAATAACTAGGC+CGG | - | chr1.2:34629698-34629717 | MS.gene040721:CDS | 55.0% | |
| TCCAATGCCCTCCATCTCAC+GGG | - | chr1.2:34629682-34629701 | MS.gene040721:CDS | 55.0% | |
| TGTTGGTCAGGCAGAACCAC+TGG | - | chr1.2:34629427-34629446 | MS.gene040721:intron | 55.0% | |
| ! | AGGGATGTGGACTGAGGAGA+GGG | - | chr1.2:34627734-34627753 | MS.gene040721:intron | 55.0% |
| ! | GGAAGCCGTTGGGTTAGGTT+CGG | - | chr1.2:34627818-34627837 | MS.gene040721:intron | 55.0% |
| !! | GAGAAAAGGGCTTTGGGGAG+AGG | - | chr1.2:34629985-34630004 | MS.gene040721:CDS | 55.0% |
| ACCCAGAAACCAGGACCCAG+TGG | + | chr1.2:34629446-34629465 | None:intergenic | 60.0% | |
| CAATGCCCTCCATCTCACGG+GGG | - | chr1.2:34629684-34629703 | MS.gene040721:CDS | 60.0% | |
| CCAATGCCCTCCATCTCACG+GGG | - | chr1.2:34629683-34629702 | MS.gene040721:CDS | 60.0% | |
| CCACCCGATGTAACAGACGC+TGG | + | chr1.2:34626644-34626663 | None:intergenic | 60.0% | |
| CCAGCGTCTGTTACATCGGG+TGG | - | chr1.2:34626641-34626660 | MS.gene040721:intron | 60.0% | |
| GCAGACACCAGACACCGACA+TGG | - | chr1.2:34627377-34627396 | MS.gene040721:intron | 60.0% | |
| GGATGCTGAGCTGGCATAGC+AGG | - | chr1.2:34627683-34627702 | MS.gene040721:intron | 60.0% | |
| GGCCAGCTGAGTCCAGATGA+AGG | - | chr1.2:34627609-34627628 | MS.gene040721:intron | 60.0% | |
| TGCTGAGCTGGCATAGCAGG+TGG | - | chr1.2:34627686-34627705 | MS.gene040721:intron | 60.0% | |
| ! | CAGGGATGTGGACTGAGGAG+AGG | - | chr1.2:34627733-34627752 | MS.gene040721:intron | 60.0% |
| ! | CTGGGTCCTGGTTTCTGGGT+TGG | - | chr1.2:34629446-34629465 | MS.gene040721:intron | 60.0% |
| ! | GGGATGTGGACTGAGGAGAG+GGG | - | chr1.2:34627735-34627754 | MS.gene040721:intron | 60.0% |
| CAGGCAGAACCACTGGGTCC+TGG | - | chr1.2:34629434-34629453 | MS.gene040721:intron | 65.0% | |
| CGGTGGGAAGCCGTTGGGTT+AGG | - | chr1.2:34627813-34627832 | MS.gene040721:intron | 65.0% | |
| CTCTGCGGTGGGAAGCCGTT+GGG | - | chr1.2:34627808-34627827 | MS.gene040721:intron | 65.0% | |
| TCTCTGCGGTGGGAAGCCGT+TGG | - | chr1.2:34627807-34627826 | MS.gene040721:intron | 65.0% | |
| ! | CCCCGTGAGATGGAGGGCAT+TGG | + | chr1.2:34629686-34629705 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 34626264 | 34630303 | 34626264 | ID=MS.gene040721 |
| chr1.2 | mRNA | 34626264 | 34630303 | 34626264 | ID=MS.gene040721.t1;Parent=MS.gene040721 |
| chr1.2 | exon | 34629955 | 34630303 | 34629955 | ID=MS.gene040721.t1.exon1;Parent=MS.gene040721.t1 |
| chr1.2 | CDS | 34629955 | 34630303 | 34629955 | ID=cds.MS.gene040721.t1;Parent=MS.gene040721.t1 |
| chr1.2 | exon | 34629676 | 34629737 | 34629676 | ID=MS.gene040721.t1.exon2;Parent=MS.gene040721.t1 |
| chr1.2 | CDS | 34629676 | 34629737 | 34629676 | ID=cds.MS.gene040721.t1;Parent=MS.gene040721.t1 |
| chr1.2 | exon | 34629145 | 34629186 | 34629145 | ID=MS.gene040721.t1.exon3;Parent=MS.gene040721.t1 |
| chr1.2 | CDS | 34629145 | 34629186 | 34629145 | ID=cds.MS.gene040721.t1;Parent=MS.gene040721.t1 |
| chr1.2 | exon | 34627060 | 34627193 | 34627060 | ID=MS.gene040721.t1.exon4;Parent=MS.gene040721.t1 |
| chr1.2 | CDS | 34627060 | 34627193 | 34627060 | ID=cds.MS.gene040721.t1;Parent=MS.gene040721.t1 |
| chr1.2 | exon | 34626836 | 34626905 | 34626836 | ID=MS.gene040721.t1.exon5;Parent=MS.gene040721.t1 |
| chr1.2 | CDS | 34626836 | 34626905 | 34626836 | ID=cds.MS.gene040721.t1;Parent=MS.gene040721.t1 |
| chr1.2 | exon | 34626264 | 34626311 | 34626264 | ID=MS.gene040721.t1.exon6;Parent=MS.gene040721.t1 |
| chr1.2 | CDS | 34626264 | 34626311 | 34626264 | ID=cds.MS.gene040721.t1;Parent=MS.gene040721.t1 |
| Gene Sequence |
| Protein sequence |
