Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045185.t1 | XP_003601873.1 | 100 | 459 | 0 | 0 | 1 | 459 | 77 | 535 | 4.40E-257 | 896.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045185.t1 | O04450 | 90.0 | 459 | 46 | 0 | 1 | 459 | 77 | 535 | 2.3e-238 | 825.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045185.t1 | G7J2L7 | 100.0 | 459 | 0 | 0 | 1 | 459 | 77 | 535 | 3.2e-257 | 896.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045185.t1 | MTR_3g086330 | 100.000 | 459 | 0 | 0 | 1 | 459 | 77 | 535 | 0.0 | 945 |
| MS.gene045185.t1 | MTR_3g109925 | 35.421 | 463 | 286 | 7 | 1 | 455 | 73 | 530 | 1.23e-77 | 251 |
| MS.gene045185.t1 | MTR_2g013540 | 31.897 | 464 | 300 | 9 | 1 | 455 | 68 | 524 | 1.07e-70 | 234 |
| MS.gene045185.t1 | MTR_7g113470 | 32.604 | 457 | 298 | 6 | 1 | 455 | 69 | 517 | 1.41e-68 | 228 |
| MS.gene045185.t1 | MTR_7g067470 | 32.604 | 457 | 298 | 6 | 1 | 455 | 69 | 517 | 2.47e-68 | 227 |
| MS.gene045185.t1 | MTR_5g087560 | 29.437 | 462 | 311 | 7 | 1 | 454 | 72 | 526 | 9.05e-61 | 207 |
| MS.gene045185.t1 | MTR_3g109925 | 30.369 | 461 | 255 | 7 | 1 | 455 | 73 | 473 | 6.81e-56 | 192 |
| MS.gene045185.t1 | MTR_8g088270 | 30.105 | 475 | 303 | 10 | 1 | 454 | 68 | 534 | 1.31e-52 | 186 |
| MS.gene045185.t1 | MTR_2g013540 | 30.504 | 377 | 251 | 7 | 85 | 455 | 4 | 375 | 1.42e-51 | 179 |
| MS.gene045185.t1 | MTR_7g406870 | 28.480 | 467 | 314 | 9 | 1 | 454 | 66 | 525 | 1.55e-46 | 169 |
| MS.gene045185.t1 | MTR_6g032870 | 26.898 | 461 | 320 | 8 | 1 | 454 | 70 | 520 | 2.83e-41 | 154 |
| MS.gene045185.t1 | MTR_1g030650 | 24.781 | 456 | 336 | 5 | 1 | 454 | 73 | 523 | 5.85e-40 | 151 |
| MS.gene045185.t1 | MTR_7g406870 | 27.619 | 420 | 284 | 9 | 48 | 454 | 1 | 413 | 1.18e-35 | 137 |
| MS.gene045185.t1 | MTR_8g105970 | 30.976 | 297 | 175 | 7 | 112 | 401 | 62 | 335 | 3.58e-33 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045185.t1 | AT1G24510 | 89.978 | 459 | 46 | 0 | 1 | 459 | 24 | 482 | 0.0 | 868 |
| MS.gene045185.t1 | AT1G24510 | 89.978 | 459 | 46 | 0 | 1 | 459 | 77 | 535 | 0.0 | 868 |
| MS.gene045185.t1 | AT1G24510 | 89.978 | 459 | 46 | 0 | 1 | 459 | 1 | 459 | 0.0 | 867 |
| MS.gene045185.t1 | AT3G18190 | 33.909 | 463 | 293 | 7 | 1 | 455 | 77 | 534 | 4.16e-79 | 255 |
| MS.gene045185.t1 | AT5G26360 | 32.900 | 462 | 298 | 7 | 1 | 455 | 68 | 524 | 1.65e-68 | 228 |
| MS.gene045185.t1 | AT5G20890 | 32.385 | 457 | 299 | 6 | 1 | 455 | 69 | 517 | 3.51e-68 | 226 |
| MS.gene045185.t1 | AT3G11830 | 29.221 | 462 | 312 | 6 | 1 | 454 | 72 | 526 | 1.77e-58 | 201 |
| MS.gene045185.t1 | AT3G11830 | 29.437 | 462 | 309 | 7 | 1 | 454 | 72 | 524 | 1.66e-57 | 199 |
| MS.gene045185.t1 | AT3G20050 | 29.684 | 475 | 305 | 9 | 1 | 454 | 68 | 534 | 3.30e-56 | 195 |
| MS.gene045185.t1 | AT5G16070 | 27.682 | 466 | 318 | 8 | 1 | 454 | 66 | 524 | 9.97e-47 | 169 |
| MS.gene045185.t1 | AT3G02530 | 27.623 | 467 | 318 | 9 | 1 | 454 | 66 | 525 | 1.25e-44 | 164 |
| MS.gene045185.t1 | AT3G03960 | 23.241 | 469 | 327 | 6 | 1 | 454 | 76 | 526 | 1.45e-37 | 144 |
Find 104 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAGCAAGCTGAGAGGCTTT+TGG | 0.216810 | 3.3:-72062063 | MS.gene045185:CDS |
| TGAGTTTGGTGAAACTATTT+TGG | 0.252642 | 3.3:-72061949 | MS.gene045185:CDS |
| AGAGAGGAAAGATGTTAATT+TGG | 0.255619 | 3.3:-72061683 | MS.gene045185:CDS |
| AGGAAAGGTTGGTGGGAAAT+TGG | 0.275960 | 3.3:-72061644 | MS.gene045185:CDS |
| ATTGCTAATAAGTTTGAGTT+TGG | 0.316748 | 3.3:-72061963 | MS.gene045185:CDS |
| GAAGATACTGAGTTGGTATA+TGG | 0.326902 | 3.3:-72061622 | MS.gene045185:CDS |
| GGAACTTGCCAGCTGTTAGA+TGG | 0.327806 | 3.3:-72061121 | MS.gene045185:CDS |
| CAGTATGCAATTAGAGCATT+TGG | 0.341403 | 3.3:-72058787 | MS.gene045185:CDS |
| TTGGATCTGATTAAAGTAGA+AGG | 0.353109 | 3.3:-72061664 | MS.gene045185:CDS |
| TAGAGCATTTGGGGATGCTT+TGG | 0.353755 | 3.3:-72058776 | MS.gene045185:CDS |
| CAGGATTGCTGTTGAGAATC+TGG | 0.357169 | 3.3:-72061991 | MS.gene045185:CDS |
| CGCAATAATTCAATTGTGTA+TGG | 0.358368 | 3.3:-72060046 | MS.gene045185:CDS |
| TCAATTTGCTTTGGCATTTG+AGG | 0.361290 | 3.3:+72061571 | None:intergenic |
| AAGATAATGTTTCAATTGGT+TGG | 0.367949 | 3.3:+72058716 | None:intergenic |
| AACCCTTGTTATTTGCCAAT+GGG | 0.374410 | 3.3:-72061180 | MS.gene045185:CDS |
| TATTCAAGGCTGGCATCGTT+AGG | 0.383631 | 3.3:-72060699 | MS.gene045185:intron |
| ACAGAAGATAATGTTTCAAT+TGG | 0.393608 | 3.3:+72058712 | None:intergenic |
| AGTATGCAATTAGAGCATTT+GGG | 0.396525 | 3.3:-72058786 | MS.gene045185:CDS |
| CAGATTCTCAACAGCAATCC+TGG | 0.396710 | 3.3:+72061992 | None:intergenic |
| CCACCATCAGCTTCGCAATC+TGG | 0.398136 | 3.3:+72062159 | None:intergenic |
| TTAGCATCTTCAATTTGCTT+TGG | 0.400918 | 3.3:+72061562 | None:intergenic |
| TACCCTTCAGCAATCCTAAT+AGG | 0.405829 | 3.3:+72062026 | None:intergenic |
| CAACCCTTGTTATTTGCCAA+TGG | 0.407278 | 3.3:-72061181 | MS.gene045185:CDS |
| GAATTGATTGCCATAGCAAC+AGG | 0.418257 | 3.3:-72061080 | MS.gene045185:intron |
| ATCAATATCAACCTTATGCT+TGG | 0.422485 | 3.3:+72061495 | None:intergenic |
| AACGTGGGATTCATCCTATT+AGG | 0.438166 | 3.3:-72062040 | MS.gene045185:CDS |
| GGTGGAGTTGTCGAGGAGTC+AGG | 0.444912 | 3.3:-72062141 | MS.gene045185:CDS |
| AAGAATTGTTCCTAGGTTCC+AGG | 0.448072 | 3.3:-72060921 | MS.gene045185:CDS |
| GGAGTTAACTGCAGAAAAGT+TGG | 0.452554 | 3.3:-72060900 | MS.gene045185:CDS |
| ATGGGTTGGTGGTGTTGAGT+TGG | 0.463335 | 3.3:-72061102 | MS.gene045185:CDS |
| TAGATACCCTGGTGTAGAAC+AGG | 0.465187 | 3.3:-72059972 | MS.gene045185:intron |
| TTGCCAGCTGTTAGATGGGT+TGG | 0.487328 | 3.3:-72061116 | MS.gene045185:CDS |
| GAAATCGGTGATGGAACTAC+TGG | 0.496232 | 3.3:-72062113 | MS.gene045185:CDS |
| CTTCATCGTCAAAACCCCAT+TGG | 0.502021 | 3.3:+72061165 | None:intergenic |
| AATGCTCAATGTACAGCATT+CGG | 0.502628 | 3.3:+72060650 | None:intergenic |
| TTTGCTTTGGCATTTGAGGA+TGG | 0.503760 | 3.3:+72061575 | None:intergenic |
| AAGATATATTAGTACTCAGA+TGG | 0.504953 | 3.3:+72058384 | None:intergenic |
| GCAGTTAACTCCTGGAACCT+AGG | 0.506692 | 3.3:+72060911 | None:intergenic |
| TGCTTTGGAGTCGATTCCTA+TGG | 0.507540 | 3.3:-72058761 | MS.gene045185:CDS |
| GATTGCTGAAGGGTATGAAA+TGG | 0.509686 | 3.3:-72062018 | MS.gene045185:CDS |
| TTGAGCATTGTGCAAACTCA+AGG | 0.510053 | 3.3:-72060636 | MS.gene045185:CDS |
| GGCATTGATTGCAATGATGT+TGG | 0.511857 | 3.3:-72058522 | MS.gene045185:CDS |
| GAGTTAACTGCAGAAAAGTT+GGG | 0.512302 | 3.3:-72060899 | MS.gene045185:CDS |
| AGGAGTCAGGACTATGAAAT+CGG | 0.512722 | 3.3:-72062128 | MS.gene045185:CDS |
| CAAATCATCTCTTGATGCAC+AGG | 0.514162 | 3.3:-72061142 | MS.gene045185:CDS |
| ATTAAAGTAGAAGGAAAGGT+TGG | 0.519658 | 3.3:-72061655 | MS.gene045185:CDS |
| CCAGCTGTTAGATGGGTTGG+TGG | 0.521172 | 3.3:-72061113 | MS.gene045185:CDS |
| ATTCAAGGCTGGCATCGTTA+GGG | 0.521490 | 3.3:-72060698 | MS.gene045185:intron |
| TGAAAGCATACCTGTTGCTA+TGG | 0.526459 | 3.3:+72061070 | None:intergenic |
| AACGTCTTTGAGACTTTGAT+CGG | 0.527660 | 3.3:-72058477 | MS.gene045185:CDS |
| GAACTTGCCAGCTGTTAGAT+GGG | 0.529474 | 3.3:-72061120 | MS.gene045185:CDS |
| AAGGTGGAAGAATTGTTCCT+AGG | 0.532762 | 3.3:-72060928 | MS.gene045185:CDS |
| TGTGAAGTCTCAGCAAATAA+CGG | 0.532861 | 3.3:-72058692 | MS.gene045185:intron |
| ACCCTTGTTATTTGCCAATG+GGG | 0.538387 | 3.3:-72061179 | MS.gene045185:CDS |
| AGATATATTAGTACTCAGAT+GGG | 0.538795 | 3.3:+72058385 | None:intergenic |
| ATGGCCCTTGCGGAAAATAG+TGG | 0.540167 | 3.3:-72058742 | MS.gene045185:CDS |
| ATTAATGTTGCAGTGTGAAT+CGG | 0.540958 | 3.3:-72061762 | MS.gene045185:intron |
| AAGGGTATGAAATGGCGTCC+AGG | 0.542596 | 3.3:-72062010 | MS.gene045185:CDS |
| ACTGGAGTAGTTGTGTTGGC+TGG | 0.546101 | 3.3:-72062095 | MS.gene045185:CDS |
| AACCCCATTGGCAAATAACA+AGG | 0.547165 | 3.3:+72061177 | None:intergenic |
| TATGTTGATCTGCAGGATGT+AGG | 0.549314 | 3.3:-72061206 | MS.gene045185:intron |
| CATCCTATTAGGATTGCTGA+AGG | 0.555989 | 3.3:-72062029 | MS.gene045185:CDS |
| TCTGATTAAAGTAGAAGGAA+AGG | 0.558317 | 3.3:-72061659 | MS.gene045185:CDS |
| TATTGCCGTGGAGGCAGCTG+CGG | 0.559909 | 3.3:-72059996 | MS.gene045185:CDS |
| GTCATACAAGTCTGAATCAA+CGG | 0.560241 | 3.3:+72061924 | None:intergenic |
| AAGTAGAAGGAAAGGTTGGT+GGG | 0.562439 | 3.3:-72061651 | MS.gene045185:CDS |
| CCACCAACCCATCTAACAGC+TGG | 0.565017 | 3.3:+72061113 | None:intergenic |
| AGCAGAGATTGCTGTGAAAG+CGG | 0.565406 | 3.3:-72061725 | MS.gene045185:CDS |
| AATTCAATTGTGTATGGTGG+TGG | 0.567875 | 3.3:-72060040 | MS.gene045185:CDS |
| GCTGTAACAATATTCATTCG+TGG | 0.573464 | 3.3:-72060613 | MS.gene045185:CDS |
| AAAGTAGAAGGAAAGGTTGG+TGG | 0.573563 | 3.3:-72061652 | MS.gene045185:CDS |
| AGCTGATGGTGGAGTTGTCG+AGG | 0.578499 | 3.3:-72062148 | MS.gene045185:CDS |
| GTCGATTCCTATGGCCCTTG+CGG | 0.578950 | 3.3:-72058752 | MS.gene045185:CDS |
| AACTGCAGAAAAGTTGGGAA+AGG | 0.579205 | 3.3:-72060894 | MS.gene045185:intron |
| TTGCTGTTGCTGATCTAGAG+AGG | 0.592013 | 3.3:-72061699 | MS.gene045185:CDS |
| ATGCATACCTGTTCTACACC+AGG | 0.592892 | 3.3:+72059965 | None:intergenic |
| CAGGACTATGAAATCGGTGA+TGG | 0.595822 | 3.3:-72062122 | MS.gene045185:CDS |
| GAAATTGGAAGATACTGAGT+TGG | 0.598794 | 3.3:-72061629 | MS.gene045185:CDS |
| GCAGCTGCGGATAGATACCC+TGG | 0.603416 | 3.3:-72059983 | MS.gene045185:CDS |
| CAACCAGATTGCGAAGCTGA+TGG | 0.607157 | 3.3:-72062162 | MS.gene045185:CDS |
| TGGAGAAGTTTCAGACGTTG+AGG | 0.608157 | 3.3:-72061468 | MS.gene045185:CDS |
| TAAGGTTGATATTGATACAG+TGG | 0.610608 | 3.3:-72061488 | MS.gene045185:CDS |
| AACTACTGGAGTAGTTGTGT+TGG | 0.618822 | 3.3:-72062099 | MS.gene045185:CDS |
| CCAGATTGCGAAGCTGATGG+TGG | 0.619787 | 3.3:-72062159 | MS.gene045185:CDS |
| ATATGGAATCATTGTTGACA+AGG | 0.619909 | 3.3:-72061605 | MS.gene045185:CDS |
| GTATGCAATTAGAGCATTTG+GGG | 0.621724 | 3.3:-72058785 | MS.gene045185:CDS |
| TGCATGCTCTATTGCCGTGG+AGG | 0.622636 | 3.3:-72060005 | MS.gene045185:CDS |
| TCTATCCGCAGCTGCCTCCA+CGG | 0.622675 | 3.3:+72059991 | None:intergenic |
| TGAGCATTGTGCAAACTCAA+GGG | 0.627646 | 3.3:-72060635 | MS.gene045185:CDS |
| GATTGCATGCTCTATTGCCG+TGG | 0.631363 | 3.3:-72060008 | MS.gene045185:CDS |
| TTGCAATCAATGCCAAAGTG+AGG | 0.646416 | 3.3:+72058531 | None:intergenic |
| CTCTTCTCGAGCAAGCTGAG+AGG | 0.647309 | 3.3:-72062070 | MS.gene045185:CDS |
| AGGTAACAAAATGATCATTG+AGG | 0.649249 | 3.3:-72060119 | MS.gene045185:CDS |
| TGACATGGTTCAACAATGCA+AGG | 0.652286 | 3.3:-72061422 | MS.gene045185:intron |
| ATCCTATTAGGATTGCTGAA+GGG | 0.653489 | 3.3:-72062028 | MS.gene045185:CDS |
| ATGATGCATTGTGTGTGGCT+AGG | 0.656157 | 3.3:-72060078 | MS.gene045185:CDS |
| GATATATTAGTACTCAGATG+GGG | 0.666907 | 3.3:+72058386 | None:intergenic |
| TGCATACCTGTTCTACACCA+GGG | 0.668346 | 3.3:+72059966 | None:intergenic |
| AATAATTCAATTGTGTATGG+TGG | 0.668688 | 3.3:-72060043 | MS.gene045185:CDS |
| ATGTTGGCACCAATGACATG+AGG | 0.676772 | 3.3:-72058506 | MS.gene045185:CDS |
| ACCCCATTGGCAAATAACAA+GGG | 0.683763 | 3.3:+72061178 | None:intergenic |
| TATTCATGATGCATTGTGTG+TGG | 0.693925 | 3.3:-72060083 | MS.gene045185:CDS |
| GTAACAATATTCATTCGTGG+AGG | 0.711015 | 3.3:-72060610 | MS.gene045185:intron |
| TGTTGGCACCAATGACATGA+GGG | 0.722471 | 3.3:-72058505 | MS.gene045185:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr3.3:72060275-72060294 | None:intergenic | 10.0% |
| !! | AGTAAAATCTTATAAAAATT+TGG | + | chr3.3:72061188-72061207 | None:intergenic | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr3.3:72060276-72060295 | None:intergenic | 10.0% |
| !! | TTATTTAATAAAAATAAGCA+GGG | + | chr3.3:72060826-72060845 | None:intergenic | 10.0% |
| !! | TTTATTTAATAAAAATAAGC+AGG | + | chr3.3:72060827-72060846 | None:intergenic | 10.0% |
| !!! | ACTTTACTTTTTTTAAATAA+TGG | - | chr3.3:72061666-72061685 | MS.gene045185:CDS | 10.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr3.3:72060274-72060293 | None:intergenic | 15.0% |
| !! | ATTAAAAAATAACCAAATGA+CGG | + | chr3.3:72061725-72061744 | None:intergenic | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr3.3:72060210-72060229 | None:intergenic | 15.0% |
| !! | TAAAGTAAATGATCTTTATT+TGG | + | chr3.3:72061652-72061671 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr3.3:72060211-72060230 | None:intergenic | 15.0% |
| !!! | ATCTTATAAAAATTTGGTTT+CGG | + | chr3.3:72061182-72061201 | None:intergenic | 15.0% |
| !!! | GATTATAAATTTTAAGCATT+TGG | - | chr3.3:72061403-72061422 | MS.gene045185:intron | 15.0% |
| !!! | TTTTATTCTATTGTTTTGTA+TGG | + | chr3.3:72061113-72061132 | None:intergenic | 15.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr3.3:72060251-72060270 | None:intergenic | 20.0% |
| !! | AAATTTATAATCCTTGTGAT+TGG | + | chr3.3:72061395-72061414 | None:intergenic | 20.0% |
| !! | AATTATAATTTACCGTCATT+TGG | - | chr3.3:72061710-72061729 | MS.gene045185:CDS | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | + | chr3.3:72060178-72060197 | None:intergenic | 20.0% |
| !! | ATTAATTTCCAAATTGGAAA+AGG | - | chr3.3:72060889-72060908 | MS.gene045185:intron | 20.0% |
| !! | CATATTATATTATTAACCCA+CGG | - | chr3.3:72060620-72060639 | MS.gene045185:CDS | 20.0% |
| !! | GATCTAATTAATTTCCAAAT+TGG | - | chr3.3:72060883-72060902 | MS.gene045185:intron | 20.0% |
| !! | GTTAATTTATGATCTATTCA+AGG | - | chr3.3:72059852-72059871 | MS.gene045185:intron | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | + | chr3.3:72060177-72060196 | None:intergenic | 20.0% |
| !! | TTAATTTCCAAATTGGAAAA+GGG | - | chr3.3:72060890-72060909 | MS.gene045185:intron | 20.0% |
| !! | TTGTGGTTAATTTCATAATT+TGG | - | chr3.3:72060788-72060807 | MS.gene045185:intron | 20.0% |
| !!! | ACCTTTCCTTTTTTTTTTTT+GGG | - | chr3.3:72059732-72059751 | MS.gene045185:intron | 20.0% |
| !!! | ATAGACAAAAATTCTGAAAA+TGG | - | chr3.3:72061000-72061019 | MS.gene045185:intron | 20.0% |
| !!! | CAATTATGATTCTTTTGTTT+TGG | - | chr3.3:72059516-72059535 | MS.gene045185:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr3.3:72060141-72060160 | None:intergenic | 20.0% |
| !!! | GATTTTCTTTTTGTAAATGA+AGG | - | chr3.3:72059618-72059637 | MS.gene045185:intron | 20.0% |
| !!! | TATGTAATTAGTCATCTTTT+AGG | - | chr3.3:72060025-72060044 | MS.gene045185:CDS | 20.0% |
| !!! | TTTTTTTACCTATCTAAGTA+GGG | - | chr3.3:72059208-72059227 | MS.gene045185:intron | 20.0% |
| !!! | TTTTTTTTACCTATCTAAGT+AGG | - | chr3.3:72059207-72059226 | MS.gene045185:intron | 20.0% |
| ! | AAGATAATGTTTCAATTGGT+TGG | + | chr3.3:72061852-72061871 | None:intergenic | 25.0% |
| ! | AATAATTCAATTGTGTATGG+TGG | - | chr3.3:72060522-72060541 | MS.gene045185:intron | 25.0% |
| ! | ACAGAAGATAATGTTTCAAT+TGG | + | chr3.3:72061856-72061875 | None:intergenic | 25.0% |
| ! | ACCACTAAAACAAAATGTTA+AGG | + | chr3.3:72059992-72060011 | None:intergenic | 25.0% |
| ! | ACCCAAAAAAAAAAAAGGAA+AGG | + | chr3.3:72059736-72059755 | None:intergenic | 25.0% |
| ! | AGAAGACCCAAAAAAAAAAA+AGG | + | chr3.3:72059741-72059760 | None:intergenic | 25.0% |
| ! | ATGAGAAATAGTTTGAAAGT+AGG | - | chr3.3:72061552-72061571 | MS.gene045185:CDS | 25.0% |
| ! | ATTGTACTTGTCTAAATGAT+TGG | + | chr3.3:72061605-72061624 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr3.3:72060252-72060271 | None:intergenic | 25.0% |
| ! | GTAAGCCATAAAAAGAAATA+AGG | + | chr3.3:72059708-72059727 | None:intergenic | 25.0% |
| ! | TAATTTCCAAATTGGAAAAG+GGG | - | chr3.3:72060891-72060910 | MS.gene045185:intron | 25.0% |
| ! | TATTGGTATTTGAGCTAATT+GGG | - | chr3.3:72059254-72059273 | MS.gene045185:intron | 25.0% |
| ! | TGTTAACACTTAACAATAAC+AGG | + | chr3.3:72060754-72060773 | None:intergenic | 25.0% |
| ! | TTCACATTATAAGAATGTCT+TGG | - | chr3.3:72061449-72061468 | MS.gene045185:CDS | 25.0% |
| ! | TTGAATTTACTAGCAATTGT+GGG | - | chr3.3:72059764-72059783 | MS.gene045185:intron | 25.0% |
| ! | TTTGAATTTACTAGCAATTG+TGG | - | chr3.3:72059763-72059782 | MS.gene045185:intron | 25.0% |
| !! | AATACTCAAGAGATAGATTT+TGG | + | chr3.3:72061336-72061355 | None:intergenic | 25.0% |
| !! | ACAAAAATTCTGAAAATGGA+GGG | - | chr3.3:72061004-72061023 | MS.gene045185:intron | 25.0% |
| !! | ATTGCTAATAAGTTTGAGTT+TGG | - | chr3.3:72058602-72058621 | MS.gene045185:intron | 25.0% |
| !! | CTTTCAAACTATTTCTCATT+AGG | + | chr3.3:72061551-72061570 | None:intergenic | 25.0% |
| !! | GAATTTTTGTCTATGAACAT+TGG | + | chr3.3:72060994-72061013 | None:intergenic | 25.0% |
| !! | TTAAAGTCGTTCTAAACTTT+AGG | - | chr3.3:72060666-72060685 | MS.gene045185:CDS | 25.0% |
| !! | TTTCTTTTTGTAAATGAAGG+TGG | - | chr3.3:72059621-72059640 | MS.gene045185:intron | 25.0% |
| !!! | ACAGAAATATTTTGATGACA+TGG | - | chr3.3:72059128-72059147 | MS.gene045185:intron | 25.0% |
| !!! | GACCTTTCCTTTTTTTTTTT+TGG | - | chr3.3:72059731-72059750 | MS.gene045185:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr3.3:72060142-72060161 | None:intergenic | 25.0% |
| !!! | TCCTTAACATTTTGTTTTAG+TGG | - | chr3.3:72059988-72060007 | MS.gene045185:CDS | 25.0% |
| !!! | TTAATGCTTTTGTTGATTGA+TGG | - | chr3.3:72061740-72061759 | MS.gene045185:CDS | 25.0% |
| AAAAAAAAAAGGAAAGGTCG+AGG | + | chr3.3:72059730-72059749 | None:intergenic | 30.0% | |
| AAACAGACAACAAGAATCAT+TGG | + | chr3.3:72059811-72059830 | None:intergenic | 30.0% | |
| AAATGAACTGTTAGTGTATC+AGG | - | chr3.3:72061030-72061049 | MS.gene045185:intron | 30.0% | |
| AATTGTGGGGAAAGTAATTT+AGG | - | chr3.3:72059778-72059797 | MS.gene045185:intron | 30.0% | |
| AGACTAAATATGGAGATAGA+TGG | + | chr3.3:72060963-72060982 | None:intergenic | 30.0% | |
| AGAGAGGAAAGATGTTAATT+TGG | - | chr3.3:72058882-72058901 | MS.gene045185:intron | 30.0% | |
| AGGTAACAAAATGATCATTG+AGG | - | chr3.3:72060446-72060465 | MS.gene045185:intron | 30.0% | |
| ATATGGAATCATTGTTGACA+AGG | - | chr3.3:72058960-72058979 | MS.gene045185:intron | 30.0% | |
| ATCAATATCAACCTTATGCT+TGG | + | chr3.3:72059073-72059092 | None:intergenic | 30.0% | |
| ATTAAAGTAGAAGGAAAGGT+TGG | - | chr3.3:72058910-72058929 | MS.gene045185:intron | 30.0% | |
| ATTAATGTTGCAGTGTGAAT+CGG | - | chr3.3:72058803-72058822 | MS.gene045185:intron | 30.0% | |
| ATTGTATAAACTTCATACCC+TGG | + | chr3.3:72061085-72061104 | None:intergenic | 30.0% | |
| ATTTATGATCTATTCAAGGC+TGG | - | chr3.3:72059856-72059875 | MS.gene045185:intron | 30.0% | |
| CGCAATAATTCAATTGTGTA+TGG | - | chr3.3:72060519-72060538 | MS.gene045185:intron | 30.0% | |
| GATTATTTATGTTGATCTGC+AGG | - | chr3.3:72059352-72059371 | MS.gene045185:intron | 30.0% | |
| GTGTTTGCACTTTATTGAAA+AGG | - | chr3.3:72059330-72059349 | MS.gene045185:intron | 30.0% | |
| TAAATTTGTCAAGATTGCTC+AGG | + | chr3.3:72060397-72060416 | None:intergenic | 30.0% | |
| TCCCAAATAAATTAAACCGT+GGG | + | chr3.3:72060639-72060658 | None:intergenic | 30.0% | |
| TCTGATTAAAGTAGAAGGAA+AGG | - | chr3.3:72058906-72058925 | MS.gene045185:intron | 30.0% | |
| TGAATTTACTAGCAATTGTG+GGG | - | chr3.3:72059765-72059784 | MS.gene045185:intron | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr3.3:72060267-72060286 | None:intergenic | 30.0% | |
| TTGGATCTGATTAAAGTAGA+AGG | - | chr3.3:72058901-72058920 | MS.gene045185:intron | 30.0% | |
| ! | AACCCACGGTTTAATTTATT+TGG | - | chr3.3:72060634-72060653 | MS.gene045185:CDS | 30.0% |
| ! | ACAATAGATCTTTGACTTTG+TGG | - | chr3.3:72060771-72060790 | MS.gene045185:intron | 30.0% |
| ! | ACCCACGGTTTAATTTATTT+GGG | - | chr3.3:72060635-72060654 | MS.gene045185:CDS | 30.0% |
| ! | AGTATGCAATTAGAGCATTT+GGG | - | chr3.3:72061779-72061798 | MS.gene045185:intron | 30.0% |
| ! | ATTTATCCCCTTTTCCAATT+TGG | + | chr3.3:72060900-72060919 | None:intergenic | 30.0% |
| ! | CAAAAATTCTGAAAATGGAG+GGG | - | chr3.3:72061005-72061024 | MS.gene045185:intron | 30.0% |
| ! | GACAAAAATTCTGAAAATGG+AGG | - | chr3.3:72061003-72061022 | MS.gene045185:intron | 30.0% |
| ! | GGAGGTAGTATAATCTTTTA+TGG | - | chr3.3:72060336-72060355 | MS.gene045185:intron | 30.0% |
| ! | GTATTGGTATTTGAGCTAAT+TGG | - | chr3.3:72059253-72059272 | MS.gene045185:intron | 30.0% |
| ! | TTAGCATCTTCAATTTGCTT+TGG | + | chr3.3:72059006-72059025 | None:intergenic | 30.0% |
| ! | TTCACTAAACGCTTACATTT+TGG | + | chr3.3:72058678-72058697 | None:intergenic | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | + | chr3.3:72060164-72060183 | None:intergenic | 30.0% |
| !! | TAAGGTTGATATTGATACAG+TGG | - | chr3.3:72059077-72059096 | MS.gene045185:intron | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | + | chr3.3:72060163-72060182 | None:intergenic | 30.0% |
| !! | TGAGTTTGGTGAAACTATTT+TGG | - | chr3.3:72058616-72058635 | MS.gene045185:intron | 30.0% |
| !! | TTAGTCATCTTTTAGGAGAT+AGG | - | chr3.3:72060032-72060051 | MS.gene045185:CDS | 30.0% |
| !!! | CTCAGCCTTATTTCTTTTTA+TGG | - | chr3.3:72059700-72059719 | MS.gene045185:intron | 30.0% |
| AAAGTCAATGTCATGATGTG+CGG | + | chr3.3:72061991-72062010 | None:intergenic | 35.0% | |
| AATGCTCAATGTACAGCATT+CGG | + | chr3.3:72059918-72059937 | None:intergenic | 35.0% | |
| AATTCAATTGTGTATGGTGG+TGG | - | chr3.3:72060525-72060544 | MS.gene045185:intron | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | + | chr3.3:72060128-72060147 | None:intergenic | 35.0% | |
| AGTGAATCGATACATGATCT+TGG | - | chr3.3:72058692-72058711 | MS.gene045185:intron | 35.0% | |
| ATCCTATTAGGATTGCTGAA+GGG | - | chr3.3:72058537-72058556 | MS.gene045185:CDS | 35.0% | |
| CAAAGTAGGTCAATTATACC+GGG | - | chr3.3:72060311-72060330 | MS.gene045185:intron | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | - | chr3.3:72060310-72060329 | MS.gene045185:intron | 35.0% | |
| CTCCCAAATAAATTAAACCG+TGG | + | chr3.3:72060640-72060659 | None:intergenic | 35.0% | |
| GAAATTGGAAGATACTGAGT+TGG | - | chr3.3:72058936-72058955 | MS.gene045185:intron | 35.0% | |
| GAGTTAACTGCAGAAAAGTT+GGG | - | chr3.3:72059666-72059685 | MS.gene045185:intron | 35.0% | |
| GCATGAGCATAGTAATAATC+AGG | + | chr3.3:72061925-72061944 | None:intergenic | 35.0% | |
| GCTGTAACAATATTCATTCG+TGG | - | chr3.3:72059952-72059971 | MS.gene045185:intron | 35.0% | |
| GGCAAAGTGAAGACTAAATA+TGG | + | chr3.3:72060973-72060992 | None:intergenic | 35.0% | |
| GGCATGTAAATTGACACAAA+TGG | - | chr3.3:72061573-72061592 | MS.gene045185:CDS | 35.0% | |
| GTAACAATATTCATTCGTGG+AGG | - | chr3.3:72059955-72059974 | MS.gene045185:intron | 35.0% | |
| GTCATACAAGTCTGAATCAA+CGG | + | chr3.3:72058644-72058663 | None:intergenic | 35.0% | |
| GTGATCAAAAGTTCATCTGA+AGG | - | chr3.3:72061260-72061279 | MS.gene045185:intron | 35.0% | |
| TATAATCCTTGTGATTGGTG+TGG | + | chr3.3:72061390-72061409 | None:intergenic | 35.0% | |
| TATTCATGATGCATTGTGTG+TGG | - | chr3.3:72060482-72060501 | MS.gene045185:intron | 35.0% | |
| TCATACCCTGGACAAAATAA+AGG | + | chr3.3:72061073-72061092 | None:intergenic | 35.0% | |
| TCTGATATGTTGCAGTTTCT+GGG | + | chr3.3:72061159-72061178 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | - | chr3.3:72060297-72060316 | MS.gene045185:intron | 35.0% | |
| TGTCTATTTGAGAAGAGTTG+TGG | + | chr3.3:72061492-72061511 | None:intergenic | 35.0% | |
| TGTGAAGTCTCAGCAAATAA+CGG | - | chr3.3:72061873-72061892 | MS.gene045185:intron | 35.0% | |
| ! | CAGTATGCAATTAGAGCATT+TGG | - | chr3.3:72061778-72061797 | MS.gene045185:intron | 35.0% |
| ! | GTATGCAATTAGAGCATTTG+GGG | - | chr3.3:72061780-72061799 | MS.gene045185:intron | 35.0% |
| ! | TCAATTTGCTTTGGCATTTG+AGG | + | chr3.3:72058997-72059016 | None:intergenic | 35.0% |
| ! | TTCATCTGAAGGTATGAAGA+GGG | - | chr3.3:72061271-72061290 | MS.gene045185:intron | 35.0% |
| !! | AAAAAAGCTGCCTTGTTGTT+TGG | - | chr3.3:72060416-72060435 | MS.gene045185:intron | 35.0% |
| !! | AACCCTTGTTATTTGCCAAT+GGG | - | chr3.3:72059385-72059404 | MS.gene045185:intron | 35.0% |
| !! | AACGTCTTTGAGACTTTGAT+CGG | - | chr3.3:72062088-72062107 | MS.gene045185:CDS | 35.0% |
| !! | ATCGTTAGGGAAAAAGCATT+TGG | - | chr3.3:72059880-72059899 | MS.gene045185:intron | 35.0% |
| !! | GAAGATACTGAGTTGGTATA+TGG | - | chr3.3:72058943-72058962 | MS.gene045185:intron | 35.0% |
| !! | TCAACCTTATGCTTGGTTTT+TGG | + | chr3.3:72059066-72059085 | None:intergenic | 35.0% |
| !!! | CTTGTCCTTTATTTTGTCCA+GGG | - | chr3.3:72061065-72061084 | MS.gene045185:intron | 35.0% |
| !!! | TCTTGTCCTTTATTTTGTCC+AGG | - | chr3.3:72061064-72061083 | MS.gene045185:intron | 35.0% |
| !!! | TTATGCTTGGTTTTTGGCTT+CGG | + | chr3.3:72059060-72059079 | None:intergenic | 35.0% |
| AAAGTAGAAGGAAAGGTTGG+TGG | - | chr3.3:72058913-72058932 | MS.gene045185:intron | 40.0% | |
| AACCCCATTGGCAAATAACA+AGG | + | chr3.3:72059391-72059410 | None:intergenic | 40.0% | |
| AACGTGGGATTCATCCTATT+AGG | - | chr3.3:72058525-72058544 | MS.gene045185:CDS | 40.0% | |
| AACTACTGGAGTAGTTGTGT+TGG | - | chr3.3:72058466-72058485 | MS.gene045185:CDS | 40.0% | |
| AACTGCAGAAAAGTTGGGAA+AGG | - | chr3.3:72059671-72059690 | MS.gene045185:intron | 40.0% | |
| AAGAATTGTTCCTAGGTTCC+AGG | - | chr3.3:72059644-72059663 | MS.gene045185:intron | 40.0% | |
| AAGGTGGAAGAATTGTTCCT+AGG | - | chr3.3:72059637-72059656 | MS.gene045185:intron | 40.0% | |
| AAGTGCAAACACATTCTAGC+AGG | + | chr3.3:72059322-72059341 | None:intergenic | 40.0% | |
| AATATTCATTCGTGGAGGTG+AGG | - | chr3.3:72059960-72059979 | MS.gene045185:intron | 40.0% | |
| ACCCCATTGGCAAATAACAA+GGG | + | chr3.3:72059390-72059409 | None:intergenic | 40.0% | |
| AGGAGTCAGGACTATGAAAT+CGG | - | chr3.3:72058437-72058456 | MS.gene045185:CDS | 40.0% | |
| ATGCTCTAATTGCATACTGC+AGG | + | chr3.3:72061777-72061796 | None:intergenic | 40.0% | |
| ATGGTTCAACAATGCAAGGT+TGG | - | chr3.3:72059147-72059166 | MS.gene045185:intron | 40.0% | |
| CAAATCATCTCTTGATGCAC+AGG | - | chr3.3:72059423-72059442 | MS.gene045185:intron | 40.0% | |
| CACTTGCTCTTTACTGGTAT+TGG | - | chr3.3:72059237-72059256 | MS.gene045185:intron | 40.0% | |
| CAGGAGAAAAATCCTCACTT+TGG | - | chr3.3:72062022-72062041 | MS.gene045185:CDS | 40.0% | |
| CATCCTATTAGGATTGCTGA+AGG | - | chr3.3:72058536-72058555 | MS.gene045185:CDS | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | + | chr3.3:72060313-72060332 | None:intergenic | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | + | chr3.3:72060127-72060146 | None:intergenic | 40.0% | |
| GAAGCCAAAAACCAAGCATA+AGG | - | chr3.3:72059059-72059078 | MS.gene045185:intron | 40.0% | |
| GAATTGATTGCCATAGCAAC+AGG | - | chr3.3:72059485-72059504 | MS.gene045185:intron | 40.0% | |
| GCTGAAAGTGAATGTTCAAG+AGG | + | chr3.3:72060706-72060725 | None:intergenic | 40.0% | |
| GGAGTTAACTGCAGAAAAGT+TGG | - | chr3.3:72059665-72059684 | MS.gene045185:intron | 40.0% | |
| GTCTGATATGTTGCAGTTTC+TGG | + | chr3.3:72061160-72061179 | None:intergenic | 40.0% | |
| TAATAGCCACACCAATCACA+AGG | - | chr3.3:72061381-72061400 | MS.gene045185:intron | 40.0% | |
| TACCCTTCAGCAATCCTAAT+AGG | + | chr3.3:72058542-72058561 | None:intergenic | 40.0% | |
| TATGTTGATCTGCAGGATGT+AGG | - | chr3.3:72059359-72059378 | MS.gene045185:intron | 40.0% | |
| TGACATGGTTCAACAATGCA+AGG | - | chr3.3:72059143-72059162 | MS.gene045185:intron | 40.0% | |
| TGCTCTAATTGCATACTGCA+GGG | + | chr3.3:72061776-72061795 | None:intergenic | 40.0% | |
| TTGACTTTAACCTTACCTGC+AGG | - | chr3.3:72062003-72062022 | MS.gene045185:CDS | 40.0% | |
| TTGCAATCAATGCCAAAGTG+AGG | + | chr3.3:72062037-72062056 | None:intergenic | 40.0% | |
| TTTGCTTTGGCATTTGAGGA+TGG | + | chr3.3:72058993-72059012 | None:intergenic | 40.0% | |
| ! | AAGTAGAAGGAAAGGTTGGT+GGG | - | chr3.3:72058914-72058933 | MS.gene045185:intron | 40.0% |
| ! | ACTTTTCTGCAGTTAACTCC+TGG | + | chr3.3:72059665-72059684 | None:intergenic | 40.0% |
| ! | GATTGCTGAAGGGTATGAAA+TGG | - | chr3.3:72058547-72058566 | MS.gene045185:intron | 40.0% |
| ! | GTTCATCTGAAGGTATGAAG+AGG | - | chr3.3:72061270-72061289 | MS.gene045185:intron | 40.0% |
| ! | TGAAAGCATACCTGTTGCTA+TGG | + | chr3.3:72059498-72059517 | None:intergenic | 40.0% |
| ! | TGAGCATTGTGCAAACTCAA+GGG | - | chr3.3:72059930-72059949 | MS.gene045185:intron | 40.0% |
| ! | TTGAGCATTGTGCAAACTCA+AGG | - | chr3.3:72059929-72059948 | MS.gene045185:intron | 40.0% |
| !! | ACCCTTGTTATTTGCCAATG+GGG | - | chr3.3:72059386-72059405 | MS.gene045185:intron | 40.0% |
| !! | CAACCCTTGTTATTTGCCAA+TGG | - | chr3.3:72059384-72059403 | MS.gene045185:intron | 40.0% |
| !! | GGCATTGATTGCAATGATGT+TGG | - | chr3.3:72062043-72062062 | MS.gene045185:CDS | 40.0% |
| !! | GTCATCTTTTAGGAGATAGG+TGG | - | chr3.3:72060035-72060054 | MS.gene045185:CDS | 40.0% |
| !!! | TATGCTTGGTTTTTGGCTTC+GGG | + | chr3.3:72059059-72059078 | None:intergenic | 40.0% |
| AGATTATACTACCTCCGTCC+CGG | + | chr3.3:72060332-72060351 | None:intergenic | 45.0% | |
| AGCAGAGATTGCTGTGAAAG+CGG | - | chr3.3:72058840-72058859 | MS.gene045185:intron | 45.0% | |
| AGGGAATCTGCATGAGTCAT+GGG | - | chr3.3:72061290-72061309 | MS.gene045185:intron | 45.0% | |
| ATGATGCATTGTGTGTGGCT+AGG | - | chr3.3:72060487-72060506 | MS.gene045185:intron | 45.0% | |
| ATGCATACCTGTTCTACACC+AGG | + | chr3.3:72060603-72060622 | None:intergenic | 45.0% | |
| ATGGCAAACATCACGACATC+AGG | + | chr3.3:72060944-72060963 | None:intergenic | 45.0% | |
| ATGTTGGCACCAATGACATG+AGG | - | chr3.3:72062059-72062078 | MS.gene045185:CDS | 45.0% | |
| ATTCAAGGCTGGCATCGTTA+GGG | - | chr3.3:72059867-72059886 | MS.gene045185:intron | 45.0% | |
| CAGATTCTCAACAGCAATCC+TGG | + | chr3.3:72058576-72058595 | None:intergenic | 45.0% | |
| CAGGACTATGAAATCGGTGA+TGG | - | chr3.3:72058443-72058462 | MS.gene045185:CDS | 45.0% | |
| CCTGCCATTACCAAACAACA+AGG | + | chr3.3:72060429-72060448 | None:intergenic | 45.0% | |
| CTTCATCGTCAAAACCCCAT+TGG | + | chr3.3:72059403-72059422 | None:intergenic | 45.0% | |
| GAACTTGCCAGCTGTTAGAT+GGG | - | chr3.3:72059445-72059464 | MS.gene045185:intron | 45.0% | |
| GAATTTGACAAGACACGCAG+TGG | - | chr3.3:72061520-72061539 | MS.gene045185:CDS | 45.0% | |
| GCTCTAATTGCATACTGCAG+GGG | + | chr3.3:72061775-72061794 | None:intergenic | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | - | chr3.3:72060315-72060334 | MS.gene045185:intron | 45.0% | |
| TAGATACCCTGGTGTAGAAC+AGG | - | chr3.3:72060593-72060612 | MS.gene045185:intron | 45.0% | |
| TATTCAAGGCTGGCATCGTT+AGG | - | chr3.3:72059866-72059885 | MS.gene045185:intron | 45.0% | |
| TGACAGTGCCCTACTTAGAT+AGG | + | chr3.3:72059219-72059238 | None:intergenic | 45.0% | |
| TGCATACCTGTTCTACACCA+GGG | + | chr3.3:72060602-72060621 | None:intergenic | 45.0% | |
| TGGAGAAGTTTCAGACGTTG+AGG | - | chr3.3:72059097-72059116 | MS.gene045185:intron | 45.0% | |
| TGTTGGCACCAATGACATGA+GGG | - | chr3.3:72062060-72062079 | MS.gene045185:CDS | 45.0% | |
| ! | AGTGAGGATTTTTCTCCTGC+AGG | + | chr3.3:72062021-72062040 | None:intergenic | 45.0% |
| ! | CACTGTCACTTGCTCTTTAC+TGG | - | chr3.3:72059231-72059250 | MS.gene045185:intron | 45.0% |
| ! | CAGGATTGCTGTTGAGAATC+TGG | - | chr3.3:72058574-72058593 | MS.gene045185:intron | 45.0% |
| ! | GAGACCACTATTTTCCGCAA+GGG | + | chr3.3:72061830-72061849 | None:intergenic | 45.0% |
| ! | GGATTTTTCTCCTGCAGGTA+AGG | + | chr3.3:72062016-72062035 | None:intergenic | 45.0% |
| ! | GTTTTGCTCCCTCATGTCAT+TGG | + | chr3.3:72062071-72062090 | None:intergenic | 45.0% |
| ! | TAGAGCATTTGGGGATGCTT+TGG | - | chr3.3:72061789-72061808 | MS.gene045185:intron | 45.0% |
| ! | TTGCTGTTGCTGATCTAGAG+AGG | - | chr3.3:72058866-72058885 | MS.gene045185:intron | 45.0% |
| !! | AGGAAAGGTTGGTGGGAAAT+TGG | - | chr3.3:72058921-72058940 | MS.gene045185:intron | 45.0% |
| !! | CCTTGTTGTTTGGTAATGGC+AGG | - | chr3.3:72060426-72060445 | MS.gene045185:intron | 45.0% |
| !! | GAAATCGGTGATGGAACTAC+TGG | - | chr3.3:72058452-72058471 | MS.gene045185:CDS | 45.0% |
| !! | GCTGCCTTGTTGTTTGGTAA+TGG | - | chr3.3:72060422-72060441 | MS.gene045185:intron | 45.0% |
| !! | TGCTTTGGAGTCGATTCCTA+TGG | - | chr3.3:72061804-72061823 | MS.gene045185:intron | 45.0% |
| !!! | ATGCTTGGTTTTTGGCTTCG+GGG | + | chr3.3:72059058-72059077 | None:intergenic | 45.0% |
| ATGGCCCTTGCGGAAAATAG+TGG | - | chr3.3:72061823-72061842 | MS.gene045185:intron | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | + | chr3.3:72060123-72060142 | None:intergenic | 50.0% | |
| CAACCAGATTGCGAAGCTGA+TGG | - | chr3.3:72058403-72058422 | MS.gene045185:CDS | 50.0% | |
| GAATATTACTCCCTCCGTCC+CGG | - | chr3.3:72060106-72060125 | MS.gene045185:CDS | 50.0% | |
| GAGGGAATCTGCATGAGTCA+TGG | - | chr3.3:72061289-72061308 | MS.gene045185:intron | 50.0% | |
| GATTGCATGCTCTATTGCCG+TGG | - | chr3.3:72060557-72060576 | MS.gene045185:intron | 50.0% | |
| GCAGTTAACTCCTGGAACCT+AGG | + | chr3.3:72059657-72059676 | None:intergenic | 50.0% | |
| GGAACTTGCCAGCTGTTAGA+TGG | - | chr3.3:72059444-72059463 | MS.gene045185:intron | 50.0% | |
| TTGCCAGCTGTTAGATGGGT+TGG | - | chr3.3:72059449-72059468 | MS.gene045185:intron | 50.0% | |
| ! | AAGGGTATGAAATGGCGTCC+AGG | - | chr3.3:72058555-72058574 | MS.gene045185:intron | 50.0% |
| ! | ACTGGAGTAGTTGTGTTGGC+TGG | - | chr3.3:72058470-72058489 | MS.gene045185:CDS | 50.0% |
| ! | CTATTTTCCGCAAGGGCCAT+AGG | + | chr3.3:72061823-72061842 | None:intergenic | 50.0% |
| ! | GGAGACCACTATTTTCCGCA+AGG | + | chr3.3:72061831-72061850 | None:intergenic | 50.0% |
| !! | ATGGGTTGGTGGTGTTGAGT+TGG | - | chr3.3:72059463-72059482 | MS.gene045185:intron | 50.0% |
| !!! | CTGAGAGGCTTTTGGAACGT+GGG | - | chr3.3:72058510-72058529 | MS.gene045185:CDS | 50.0% |
| !!! | TGCTTGGTTTTTGGCTTCGG+GGG | + | chr3.3:72059057-72059076 | None:intergenic | 50.0% |
| CCACCAACCCATCTAACAGC+TGG | + | chr3.3:72059455-72059474 | None:intergenic | 55.0% | |
| CCACCATCAGCTTCGCAATC+TGG | + | chr3.3:72058409-72058428 | None:intergenic | 55.0% | |
| CCAGATTGCGAAGCTGATGG+TGG | - | chr3.3:72058406-72058425 | MS.gene045185:CDS | 55.0% | |
| CTCTTCTCGAGCAAGCTGAG+AGG | - | chr3.3:72058495-72058514 | MS.gene045185:CDS | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | - | chr3.3:72060318-72060337 | MS.gene045185:intron | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | + | chr3.3:72060119-72060138 | None:intergenic | 55.0% | |
| TGCATGCTCTATTGCCGTGG+AGG | - | chr3.3:72060560-72060579 | MS.gene045185:intron | 55.0% | |
| TTGGCTTCGGGGGCTCAAAT+GGG | + | chr3.3:72059047-72059066 | None:intergenic | 55.0% | |
| ! | CGAGCAAGCTGAGAGGCTTT+TGG | - | chr3.3:72058502-72058521 | MS.gene045185:CDS | 55.0% |
| ! | GTCGATTCCTATGGCCCTTG+CGG | - | chr3.3:72061813-72061832 | MS.gene045185:intron | 55.0% |
| ! | TTTGGCTTCGGGGGCTCAAA+TGG | + | chr3.3:72059048-72059067 | None:intergenic | 55.0% |
| !! | AGCTGATGGTGGAGTTGTCG+AGG | - | chr3.3:72058417-72058436 | MS.gene045185:CDS | 55.0% |
| !! | CCAGCTGTTAGATGGGTTGG+TGG | - | chr3.3:72059452-72059471 | MS.gene045185:intron | 55.0% |
| !!! | GCTGAGAGGCTTTTGGAACG+TGG | - | chr3.3:72058509-72058528 | MS.gene045185:CDS | 55.0% |
| GCAGCTGCGGATAGATACCC+TGG | - | chr3.3:72060582-72060601 | MS.gene045185:intron | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | + | chr3.3:72060120-72060139 | None:intergenic | 60.0% | |
| GGTGGAGTTGTCGAGGAGTC+AGG | - | chr3.3:72058424-72058443 | MS.gene045185:CDS | 60.0% | |
| TATTGCCGTGGAGGCAGCTG+CGG | - | chr3.3:72060569-72060588 | MS.gene045185:intron | 60.0% | |
| TCTATCCGCAGCTGCCTCCA+CGG | + | chr3.3:72060577-72060596 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 72058392 | 72062195 | 72058392 | ID=MS.gene045185 |
| chr3.3 | mRNA | 72058392 | 72062195 | 72058392 | ID=MS.gene045185.t1;Parent=MS.gene045185 |
| chr3.3 | exon | 72061906 | 72062195 | 72061906 | ID=MS.gene045185.t1.exon1;Parent=MS.gene045185.t1 |
| chr3.3 | CDS | 72061906 | 72062195 | 72061906 | ID=cds.MS.gene045185.t1;Parent=MS.gene045185.t1 |
| chr3.3 | exon | 72061423 | 72061771 | 72061423 | ID=MS.gene045185.t1.exon2;Parent=MS.gene045185.t1 |
| chr3.3 | CDS | 72061423 | 72061771 | 72061423 | ID=cds.MS.gene045185.t1;Parent=MS.gene045185.t1 |
| chr3.3 | exon | 72061081 | 72061213 | 72061081 | ID=MS.gene045185.t1.exon3;Parent=MS.gene045185.t1 |
| chr3.3 | CDS | 72061081 | 72061213 | 72061081 | ID=cds.MS.gene045185.t1;Parent=MS.gene045185.t1 |
| chr3.3 | exon | 72060895 | 72060947 | 72060895 | ID=MS.gene045185.t1.exon4;Parent=MS.gene045185.t1 |
| chr3.3 | CDS | 72060895 | 72060947 | 72060895 | ID=cds.MS.gene045185.t1;Parent=MS.gene045185.t1 |
| chr3.3 | exon | 72060611 | 72060713 | 72060611 | ID=MS.gene045185.t1.exon5;Parent=MS.gene045185.t1 |
| chr3.3 | CDS | 72060611 | 72060713 | 72060611 | ID=cds.MS.gene045185.t1;Parent=MS.gene045185.t1 |
| chr3.3 | exon | 72059973 | 72060139 | 72059973 | ID=MS.gene045185.t1.exon6;Parent=MS.gene045185.t1 |
| chr3.3 | CDS | 72059973 | 72060139 | 72059973 | ID=cds.MS.gene045185.t1;Parent=MS.gene045185.t1 |
| chr3.3 | exon | 72058693 | 72058806 | 72058693 | ID=MS.gene045185.t1.exon7;Parent=MS.gene045185.t1 |
| chr3.3 | CDS | 72058693 | 72058806 | 72058693 | ID=cds.MS.gene045185.t1;Parent=MS.gene045185.t1 |
| chr3.3 | exon | 72058392 | 72058562 | 72058392 | ID=MS.gene045185.t1.exon8;Parent=MS.gene045185.t1 |
| chr3.3 | CDS | 72058392 | 72058562 | 72058392 | ID=cds.MS.gene045185.t1;Parent=MS.gene045185.t1 |
| Gene Sequence |
| Protein sequence |
