AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene042462


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042462.t1 MTR_7g086290 97.328 786 20 1 1 785 1 786 0.0 1565
MS.gene042462.t1 MTR_7g086290 97.197 785 21 1 2 785 1 785 0.0 1561
MS.gene042462.t1 MTR_7g086290 98.358 670 11 0 116 785 1 670 0.0 1360
MS.gene042462.t1 MTR_3g434840 19.753 486 323 9 277 724 202 658 3.95e-16 83.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene042462.t1 AT5G17930 64.168 547 183 5 240 783 248 784 0.0 735
MS.gene042462.t1 AT1G80930 20.747 482 330 12 274 724 328 788 3.74e-16 83.6

Find 157 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTCCACACCACGGTTTC+TGG 0.115470 7.2:+21680364 None:intergenic
TTATCTTATTTATGCATATT+TGG 0.137416 7.2:-21685155 MS.gene042462:CDS
TTCCTAGAAGTTCCACTATT+TGG 0.163925 7.2:+21687316 None:intergenic
TGACTTTGGTGCAAAGTTTA+TGG 0.165584 7.2:-21685419 MS.gene042462:CDS
AGAGTTGTCCTTGATCTTTC+AGG 0.180601 7.2:-21686919 MS.gene042462:intron
GGACTCCTTCTATGTTATTA+AGG 0.183718 7.2:+21680215 None:intergenic
TTGCCTATGGGACCACTTTA+AGG 0.201412 7.2:-21680566 MS.gene042462:CDS
AATACAAAAGATTGCCCTTC+TGG 0.221371 7.2:+21681174 None:intergenic
ACTAACTGGTTGATCCAATT+TGG 0.226474 7.2:+21687810 None:intergenic
CTCTTCTTCGTCTTCCTTCT+CGG 0.248198 7.2:+21687433 None:intergenic
TTTCTTCAGGTCTTCTTAAT+AGG 0.253956 7.2:-21686974 MS.gene042462:intron
CGAATTTGAGTATGCTCTTC+AGG 0.262203 7.2:+21687094 None:intergenic
GTATTTGCTGCGTTTGTTGC+AGG 0.264842 7.2:-21685463 MS.gene042462:CDS
AACATTCATTGTTAATGTTC+AGG 0.273039 7.2:-21683388 MS.gene042462:CDS
GTTAAAATCTCAAACCAAAT+TGG 0.287454 7.2:-21687824 MS.gene042462:CDS
GCATATTTGGAGTTTGTTCT+AGG 0.297808 7.2:-21685142 MS.gene042462:intron
GGTTTCTGGATATTCGAAAA+TGG 0.312572 7.2:+21680378 None:intergenic
TTCTTCACTTTCCTCACAAC+AGG 0.313000 7.2:+21687685 None:intergenic
GTTGTTCTTGATGTCATATA+TGG 0.324479 7.2:+21683076 None:intergenic
TAGGTTGTGGGATGAAAATA+AGG 0.325592 7.2:-21683434 MS.gene042462:CDS
GTCTAAAACCTTCAAGTTCC+GGG 0.325613 7.2:+21680320 None:intergenic
TGTCTAAAACCTTCAAGTTC+CGG 0.332632 7.2:+21680319 None:intergenic
CTTTAAGGAGCTGGAGTCTA+TGG 0.338930 7.2:-21680551 MS.gene042462:CDS
GAGACTTTAGCATCCTGTTC+TGG 0.342469 7.2:-21686182 MS.gene042462:CDS
TCAAATGTTGAGTCAATTAC+TGG 0.347626 7.2:-21686942 MS.gene042462:CDS
GTTGATGATATTTCAATTAG+AGG 0.348183 7.2:-21681370 MS.gene042462:CDS
AATGGCTGCCCAGATGGATT+TGG 0.356240 7.2:-21687602 MS.gene042462:CDS
TCATTGATACTAGGACTAAC+TGG 0.357940 7.2:+21687796 None:intergenic
CACCATTGGCCCTTCTTGTC+AGG 0.365891 7.2:+21681322 None:intergenic
TTTGAAGAAGTTCCAAATAG+TGG 0.365974 7.2:-21687328 MS.gene042462:CDS
CCGTCTGCTGATGATTTATT+CGG 0.370750 7.2:-21687487 MS.gene042462:CDS
GACTCCTTCTATGTTATTAA+GGG 0.371768 7.2:+21680216 None:intergenic
GCATTTCCGCATTCTGTTTG+AGG 0.382005 7.2:-21680401 MS.gene042462:CDS
ACTTGTGTTTCATTGATACT+AGG 0.392753 7.2:+21687787 None:intergenic
TCACCCAGCTAACCCCAAAA+AGG 0.397740 7.2:-21680429 MS.gene042462:CDS
CCAAAATTTACTCTTGCATC+AGG 0.398488 7.2:+21680194 None:intergenic
TTCCAAATAGTGGAACTTCT+AGG 0.402558 7.2:-21687318 MS.gene042462:CDS
TTTCCAATTCCAAATCCATC+TGG 0.403230 7.2:+21687593 None:intergenic
ATGGTGGTTGTCCGGAGATA+TGG 0.407898 7.2:-21681305 MS.gene042462:CDS
TGATGATTTATTCGGAGATA+TGG 0.409637 7.2:-21687479 MS.gene042462:CDS
AGAGCCCTTAATAACATAGA+AGG 0.421121 7.2:-21680220 MS.gene042462:CDS
GAGCTATACCTCAAAACATT+TGG 0.421592 7.2:+21685387 None:intergenic
TGCCCAGATGGATTTGGAAT+TGG 0.435025 7.2:-21687596 MS.gene042462:CDS
GTTTCTGAGAAGAAAGTGAT+AGG 0.442742 7.2:-21687160 MS.gene042462:CDS
AGCAAAGTTTGTGGCTGAAA+TGG 0.448728 7.2:-21680506 MS.gene042462:CDS
AGTGGAGCGGATATGACATT+GGG 0.448892 7.2:-21687199 MS.gene042462:CDS
CAGCAAGCTGCAACATTCGT+TGG 0.450365 7.2:+21681221 None:intergenic
CAGGGTTGAGATGGGTTTGT+CGG 0.459097 7.2:-21687632 MS.gene042462:CDS
TTTCAATTAGAGGGCTTACA+TGG 0.460777 7.2:-21681360 MS.gene042462:CDS
AAGGGCCAATGGTGGTTGTC+CGG 0.461527 7.2:-21681313 MS.gene042462:CDS
TCCTTACTGTTTATTGCCAC+GGG 0.462174 7.2:+21686154 None:intergenic
TGCTTCACAGATTATGATTG+AGG 0.463461 7.2:-21686204 MS.gene042462:CDS
AAAGCTGTCCAAGAAACTTA+AGG 0.464070 7.2:-21687569 MS.gene042462:CDS
AGCAAGCTGCAACATTCGTT+GGG 0.474409 7.2:+21681222 None:intergenic
AAATGGCTGACCTGCTTGCC+CGG 0.482875 7.2:+21681094 None:intergenic
GCTTCTAAGATTAGAACTAC+CGG 0.486980 7.2:-21681113 MS.gene042462:CDS
AATAAGATGAAGGCTTCCTC+TGG 0.489173 7.2:-21683357 MS.gene042462:CDS
AAAATTGTCGAGTCAAGAGC+TGG 0.496298 7.2:-21687272 MS.gene042462:CDS
CAAGAAACTTAAGGTAAAAG+AGG 0.497724 7.2:-21687560 MS.gene042462:CDS
GCAGGGACCCCGGAACTTGA+AGG 0.498946 7.2:-21680328 MS.gene042462:CDS
ATGGGACCACTTTAAGGAGC+TGG 0.499080 7.2:-21680560 MS.gene042462:CDS
AAATCACAAGTTTACTCTAC+AGG 0.503407 7.2:-21680893 MS.gene042462:intron
TGCTGCGTTTGTTGCAGGGT+TGG 0.504512 7.2:-21685458 MS.gene042462:CDS
ATGCATCTAAATATCAATCC+TGG 0.504625 7.2:-21688011 MS.gene042462:CDS
AAGATATTTACACGTATAGC+AGG 0.505760 7.2:-21680346 MS.gene042462:CDS
ATCCTTACTGTTTATTGCCA+CGG 0.506010 7.2:+21686153 None:intergenic
TTTCAGCCACAAACTTTGCT+AGG 0.509560 7.2:+21680509 None:intergenic
TTTGTCATGCTCACACAACT+TGG 0.514192 7.2:+21680915 None:intergenic
TATTTGCTGCGTTTGTTGCA+GGG 0.515626 7.2:-21685462 MS.gene042462:CDS
AATGCACCTAGCAAAGTTTG+TGG 0.517178 7.2:-21680515 MS.gene042462:CDS
TTGATGATATTTCAATTAGA+GGG 0.517221 7.2:-21681369 MS.gene042462:CDS
CCTCACTTGAGAGGTCGTGC+TGG 0.517499 7.2:-21687124 MS.gene042462:CDS
TATATCAATGGCTGCCCAGA+TGG 0.518032 7.2:-21687608 MS.gene042462:CDS
TGTACGGTTGGTATTGACTT+TGG 0.519340 7.2:-21685433 MS.gene042462:CDS
TGTTGCAGGGTTGGCCTGTA+CGG 0.519616 7.2:-21685449 MS.gene042462:CDS
TGTTGTGAGGAAAGTGAAGA+AGG 0.522444 7.2:-21687683 MS.gene042462:CDS
TACCTGGTGATGTTGAAGCC+AGG 0.522590 7.2:+21687993 None:intergenic
GGATTGAACATGTTGTTTGA+AGG 0.524784 7.2:-21687514 MS.gene042462:CDS
TCCGCTCCACTTGATTCCAC+AGG 0.526406 7.2:+21687211 None:intergenic
GCATTGTCAGAAGATGAAAT+TGG 0.528315 7.2:-21687712 MS.gene042462:CDS
CAACAAGAAGAAGGCAGAAG+AGG 0.529594 7.2:-21683057 MS.gene042462:CDS
TAACAAGTACTATACAGTGC+TGG 0.531275 7.2:-21680941 MS.gene042462:CDS
TGCAAGGGAGAGAGTAAAAG+AGG 0.532371 7.2:+21680480 None:intergenic
ATTAGAACTACCGGGCAAGC+AGG 0.538129 7.2:-21681104 MS.gene042462:intron
CATCAAGAACAACAAGAAGA+AGG 0.541349 7.2:-21683066 MS.gene042462:CDS
TAGACTCCAGCTCCTTAAAG+TGG 0.544298 7.2:+21680554 None:intergenic
GTGGTATACCTGAAAGATCA+AGG 0.545661 7.2:+21686911 None:intergenic
GTTACTTGATCCTGACAAGA+AGG 0.546357 7.2:-21681332 MS.gene042462:CDS
GGTAAAAGAGGGAAAATTGA+GGG 0.548457 7.2:-21687548 MS.gene042462:CDS
TCGAGTCAAGAGCTGGAAGA+TGG 0.550259 7.2:-21687265 MS.gene042462:CDS
TAAGAAGCGTAAGTTGTCAA+AGG 0.552433 7.2:-21687401 MS.gene042462:CDS
TGTTGCTGAAACCATATCTC+CGG 0.554707 7.2:+21681294 None:intergenic
AGGTAAAAGAGGGAAAATTG+AGG 0.555490 7.2:-21687549 MS.gene042462:CDS
GCAGGGTTGGCCTGTACGGT+TGG 0.558775 7.2:-21685445 MS.gene042462:CDS
GCTCCTTAAAGTGGTCCCAT+AGG 0.559927 7.2:+21680563 None:intergenic
TGCAGCTTGCTGCTGCTCAA+AGG 0.562763 7.2:-21681210 MS.gene042462:CDS
TTCCAATTCCAAATCCATCT+GGG 0.564105 7.2:+21687594 None:intergenic
TATCTCCGGACAACCACCAT+TGG 0.565951 7.2:+21681308 None:intergenic
TAAGTTGTCAAAGGAAGAGA+TGG 0.566399 7.2:-21687392 MS.gene042462:CDS
AAAGTCAATACCAACCGTAC+AGG 0.568919 7.2:+21685435 None:intergenic
GGGTTTGTCGGATATATCAA+TGG 0.569131 7.2:-21687620 MS.gene042462:CDS
ACTTTAGCATCCTGTTCTGG+AGG 0.570522 7.2:-21686179 MS.gene042462:CDS
TCTTGATTACGAGCTTCCAC+AGG 0.574895 7.2:+21687358 None:intergenic
CTTCTAAGATTAGAACTACC+GGG 0.578895 7.2:-21681112 MS.gene042462:CDS
TTGTATTATAATGTCTGGGG+AGG 0.579594 7.2:-21681158 MS.gene042462:CDS
TCTTCACTTTCCTCACAACA+GGG 0.581248 7.2:+21687686 None:intergenic
ATCCTGGCTTCAACATCACC+AGG 0.581380 7.2:-21687995 MS.gene042462:intron
TGATTTATTCGGAGATATGG+AGG 0.581637 7.2:-21687476 MS.gene042462:CDS
ATGAAGGCTTCCTCTGGAGA+TGG 0.585672 7.2:-21683351 MS.gene042462:CDS
AGGTTGTGGGATGAAAATAA+GGG 0.587094 7.2:-21683433 MS.gene042462:CDS
TACCTCAAAACATTTGGCAA+AGG 0.589187 7.2:+21685393 None:intergenic
TTACTTGATCCTGACAAGAA+GGG 0.589276 7.2:-21681331 MS.gene042462:CDS
GGACACGTCAAATAAGATGA+AGG 0.589553 7.2:-21683367 MS.gene042462:CDS
AAGAAACTTAAGGTAAAAGA+GGG 0.589712 7.2:-21687559 MS.gene042462:CDS
GTAAAAGAGGGAAAATTGAG+GGG 0.591356 7.2:-21687547 MS.gene042462:CDS
GATTTATTCGGAGATATGGA+GGG 0.591805 7.2:-21687475 MS.gene042462:CDS
TATATAGCGCCTCACTTGAG+AGG 0.591872 7.2:-21687133 MS.gene042462:CDS
AAGTGGAGCGGATATGACAT+TGG 0.594249 7.2:-21687200 MS.gene042462:CDS
GGATGAACACAGATTCCAGA+AGG 0.597603 7.2:-21681189 MS.gene042462:CDS
AACTTCTAGGAAGAAGAAGA+AGG 0.606455 7.2:-21687305 MS.gene042462:CDS
GATGGAAACTGAGGGACCTG+TGG 0.610987 7.2:-21687374 MS.gene042462:CDS
CCGAATAAATCATCAGCAGA+CGG 0.613180 7.2:+21687487 None:intergenic
CTTCACTTTCCTCACAACAG+GGG 0.613540 7.2:+21687687 None:intergenic
GCCTGTGGAATCAAGTGGAG+CGG 0.614357 7.2:-21687212 MS.gene042462:CDS
ATCCTGACAAGAAGGGCCAA+TGG 0.614713 7.2:-21681324 MS.gene042462:CDS
GAGAAGAGCAATATTCCGCA+AGG 0.622796 7.2:+21685178 None:intergenic
GATAAGCCTGTGGAATCAAG+TGG 0.625460 7.2:-21687217 MS.gene042462:CDS
TCAAGAGCTGGAAGATGGTG+CGG 0.626725 7.2:-21687260 MS.gene042462:CDS
GTTGTGAGGAAAGTGAAGAA+GGG 0.626779 7.2:-21687682 MS.gene042462:CDS
TACACGTATAGCAGGGACCC+CGG 0.631516 7.2:-21680338 MS.gene042462:CDS
CAAATTCGAAGACGTGTACG+AGG 0.632937 7.2:-21687079 MS.gene042462:intron
AATATCCAGAAACCGTGGTG+TGG 0.636650 7.2:-21680369 MS.gene042462:CDS
AACAAGACAATCTCTCCTTG+CGG 0.637598 7.2:-21685193 MS.gene042462:CDS
CCAGCACGACCTCTCAAGTG+AGG 0.637864 7.2:+21687124 None:intergenic
TCTAAAACCTTCAAGTTCCG+GGG 0.638908 7.2:+21680321 None:intergenic
TTAGGACAGAGATATAATGC+GGG 0.640001 7.2:-21680998 MS.gene042462:intron
GAGTAAGCGTTTGACTGAGG+TGG 0.641023 7.2:-21685005 MS.gene042462:CDS
AAATGGCCTCAAACAGAATG+CGG 0.647759 7.2:+21680395 None:intergenic
AAAGGAAGAGATGGAAACTG+AGG 0.651806 7.2:-21687383 MS.gene042462:CDS
ATAGTGATGAATTACCGAGA+AGG 0.653318 7.2:-21687447 MS.gene042462:CDS
TTTAGGACAGAGATATAATG+CGG 0.656302 7.2:-21680999 MS.gene042462:intron
AAGGAAGAGATGGAAACTGA+GGG 0.659528 7.2:-21687382 MS.gene042462:CDS
TGTAAATATCTTCCACACCA+CGG 0.661272 7.2:+21680357 None:intergenic
GTGGAGCGGATATGACATTG+GGG 0.667808 7.2:-21687198 MS.gene042462:CDS
AAATTGGTGCCCCTGTTGTG+AGG 0.668335 7.2:-21687696 MS.gene042462:CDS
CTGACAAGAAGGGCCAATGG+TGG 0.672882 7.2:-21681321 MS.gene042462:CDS
AGAGCTGGAAGATGGTGCGG+AGG 0.674034 7.2:-21687257 MS.gene042462:CDS
CAACAAAATAGACAAAGATG+TGG 0.674680 7.2:-21681251 MS.gene042462:CDS
AGATATTTACACGTATAGCA+GGG 0.678836 7.2:-21680345 MS.gene042462:CDS
TGGAGCGGATATGACATTGG+GGG 0.683636 7.2:-21687197 MS.gene042462:CDS
GATGAACACAGATTCCAGAA+GGG 0.693456 7.2:-21681188 MS.gene042462:CDS
CCTTACTGTTTATTGCCACG+GGG 0.695613 7.2:+21686155 None:intergenic
TTTCGAATATCCAGAAACCG+TGG 0.702174 7.2:-21680374 MS.gene042462:CDS
CTTACTGTTTATTGCCACGG+GGG 0.716557 7.2:+21686156 None:intergenic
TAAAAGAGGGAAAATTGAGG+GGG 0.717427 7.2:-21687546 MS.gene042462:CDS
GCTGAGTAAGCGTTTGACTG+AGG 0.722404 7.2:-21685008 MS.gene042462:CDS
TGTTTGCATAGATAAGCCTG+TGG 0.813760 7.2:-21687227 MS.gene042462:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.2 gene 21680201 21688193 21680201 ID=MS.gene042462
chr7.2 mRNA 21680201 21688193 21680201 ID=MS.gene042462.t1;Parent=MS.gene042462
chr7.2 exon 21688190 21688193 21688190 ID=MS.gene042462.t1.exon1;Parent=MS.gene042462.t1
chr7.2 CDS 21688190 21688193 21688190 ID=cds.MS.gene042462.t1;Parent=MS.gene042462.t1
chr7.2 exon 21687996 21688093 21687996 ID=MS.gene042462.t1.exon2;Parent=MS.gene042462.t1
chr7.2 CDS 21687996 21688093 21687996 ID=cds.MS.gene042462.t1;Parent=MS.gene042462.t1
chr7.2 exon 21687080 21687887 21687080 ID=MS.gene042462.t1.exon3;Parent=MS.gene042462.t1
chr7.2 CDS 21687080 21687887 21687080 ID=cds.MS.gene042462.t1;Parent=MS.gene042462.t1
chr7.2 exon 21686920 21686987 21686920 ID=MS.gene042462.t1.exon4;Parent=MS.gene042462.t1
chr7.2 CDS 21686920 21686987 21686920 ID=cds.MS.gene042462.t1;Parent=MS.gene042462.t1
chr7.2 exon 21686161 21686243 21686161 ID=MS.gene042462.t1.exon5;Parent=MS.gene042462.t1
chr7.2 CDS 21686161 21686243 21686161 ID=cds.MS.gene042462.t1;Parent=MS.gene042462.t1
chr7.2 exon 21685396 21685495 21685396 ID=MS.gene042462.t1.exon6;Parent=MS.gene042462.t1
chr7.2 CDS 21685396 21685495 21685396 ID=cds.MS.gene042462.t1;Parent=MS.gene042462.t1
chr7.2 exon 21685143 21685228 21685143 ID=MS.gene042462.t1.exon7;Parent=MS.gene042462.t1
chr7.2 CDS 21685143 21685228 21685143 ID=cds.MS.gene042462.t1;Parent=MS.gene042462.t1
chr7.2 exon 21684975 21685057 21684975 ID=MS.gene042462.t1.exon8;Parent=MS.gene042462.t1
chr7.2 CDS 21684975 21685057 21684975 ID=cds.MS.gene042462.t1;Parent=MS.gene042462.t1
chr7.2 exon 21683326 21683453 21683326 ID=MS.gene042462.t1.exon9;Parent=MS.gene042462.t1
chr7.2 CDS 21683326 21683453 21683326 ID=cds.MS.gene042462.t1;Parent=MS.gene042462.t1
chr7.2 exon 21683025 21683117 21683025 ID=MS.gene042462.t1.exon10;Parent=MS.gene042462.t1
chr7.2 CDS 21683025 21683117 21683025 ID=cds.MS.gene042462.t1;Parent=MS.gene042462.t1
chr7.2 exon 21681105 21681398 21681105 ID=MS.gene042462.t1.exon11;Parent=MS.gene042462.t1
chr7.2 CDS 21681105 21681398 21681105 ID=cds.MS.gene042462.t1;Parent=MS.gene042462.t1
chr7.2 exon 21680894 21681016 21680894 ID=MS.gene042462.t1.exon12;Parent=MS.gene042462.t1
chr7.2 CDS 21680894 21681016 21680894 ID=cds.MS.gene042462.t1;Parent=MS.gene042462.t1
chr7.2 exon 21680201 21680590 21680201 ID=MS.gene042462.t1.exon13;Parent=MS.gene042462.t1
chr7.2 CDS 21680201 21680590 21680201 ID=cds.MS.gene042462.t1;Parent=MS.gene042462.t1
Gene Sequence

>MS.gene042462

ATGGGTAAGTCTCCCTTTTCTCTATCTCAATCAAATACCAAAAAAATATTTACTTTCTTCATGTTTTGCATTAAAAATCTTATTTTTAATTATGTTTCAGTAGAACAAACCGCAGAAAAATCACGCCGTGAACGAAGAAAAGAATCCCGTTTAGCGAAAAATGCATCTAAATATCAATCCTGGCTTCAACATCACCAGGTAACTAACTCTCTCTCTCTATACCCCTTTTTCTCAATTCAACTTTTGTTTCCTGTTACAGGCTTACAGCCACAACAATGACAAAAGTTTATTTATTTAATTCTTTAGAAATCTGAAGCTATAAAAAGAACTAACAATCAAAATCCTGAGTTAAAATCTCAAACCAAATTGGATCAACCAGTTAGTCCTAGTATCAATGAAACACAAGTTGCAAAGAAATCGAAATCTTCGTCTAAGAAAAAAGTGGCAGCTGAAGAATGTGCATTGTCAGAAGATGAAATTGGTGCCCCTGTTGTGAGGAAAGTGAAGAAGGGTTCTCAGAAAAGTTCCAAGAAGAAAAACAGGGTTGAGATGGGTTTGTCGGATATATCAATGGCTGCCCAGATGGATTTGGAATTGGAAAGAAAGCTGTCCAAGAAACTTAAGGTAAAAGAGGGAAAATTGAGGGGGTTGGATGATGGATTGAACATGTTGTTTGAAGGAATGCCGTCTGCTGATGATTTATTCGGAGATATGGAGGGTTTTGATAGTGATGAATTACCGAGAAGGAAGACGAAGAAGAGTTCGTCGAGTAAGAAGCGTAAGTTGTCAAAGGAAGAGATGGAAACTGAGGGACCTGTGGAAGCTCGTAATCAAGATGCAGTATTTGAAGAAGTTCCAAATAGTGGAACTTCTAGGAAGAAGAAGAAGGATAAGAAAAGAAAATTGTCGAGTCAAGAGCTGGAAGATGGTGCGGAGGATGATGCTGTTTGCATAGATAAGCCTGTGGAATCAAGTGGAGCGGATATGACATTGGGGGATGCTGCTGCTGATGTTTCTGAGAAGAAAGTGATAGGAAAATATATAGCGCCTCACTTGAGAGGTCGTGCTGGCAATGAACCTGAAGAGCATACTCAAATTCGAAGACGTGTACGAGGTAGGAAGGGGGGAGACTTTGTTTTGATTTTGTATTTCTAACTCTTGTGTGTCATTAATTGTTTCTCTTTTGATTTGAACTTGTTTCTTCAGGTCTTCTTAATAGGATTTCTGAATCAAATGTTGAGTCAATTACTGGAGAGTTGTCCTTGATCTTTCAGGTATACCACTTCTATAATTTTTTAACTAATGGATTTTCATATGATTCTAAGAAACCTTACTCTCTTTTTTGTTAATTTTTAAATTCCTGCTAATTTTTTTACAATGAAACCTGCCAACTTTTTACAATAAAAGGCCCTATTTTTATATTATATGTGCCCGTTAATGAAAATAAAGTGATCAATCAGGATGAAAGAACTCAGCCTAGTTTGCCTTCTCAAATTTGAATATGTTCAGTGATAAAGGGTTAAACTCAAGACCTTTAACCCTACCATGGAGGTTGATGTTCTCCTGAGGTTAAAAATTGATGTATCTTATGGTTATGAATTGAAATAAGTTCAATAAAAGATTAAAAAATTATAATAATCTTTGTTGTTGTACTATTTGAAGAATTATTGTCCATACTAACTCATGTTGCACCTGCACGTATTTATGCTTCAAATTGAATTATATAAGGTCATAATAATTAATAGAAATGGATGTTGAAATAGTTATTCAAATAGCTTCTAGTTTGACTACTTGACTTTGTGGCCTTGACATATATAGATGCCAACTTTCAATGTTTGATATATGCCTATCTCTTGTAACTTTTTCAATTCCTTGTTGTTTATGTGAAATAAAAACAGATTATTTGTCTGGAGTTTTAACAGGCACTTCTATGATGTAATTTCTTTGCAGTCTGTTGCTCGTAGTGTTGCTTCACAGATTATGATTGAGGAGACTTTAGCATCCTGTTCTGGAGGCCCCCGTGGCAATAAACAGTAAGGATTTTTTTGCCTTCCTGTTTTACTCAGACCTCCCTATGCAAACTTGCTAAGTCTGTGATATTTTGTTTTCTATGTTTCGAAGCAAATTGTTGAACCATTGTGATGATGATTAGGGATAGCCATTAAATAGACTAAGATACTTAATCAAATTTAGTTGTAGACAAATAATGAGACAAGACATGGTTAGACCATAAAAAGTTGATTGTCTAAGGATTTAGTCTAGTTTAGGTTTAAGCCTAAAGCCTTAGATGCATGGAGATTCTCCAACCTGGAAGAGTGGGAATGATAACAAAGGAAAATAAAGATTGAGGATATTCTTTGTAAAGAAGAGAAGGGAAAGTGTGGCTCAAAAAGCATGTCTGAGAAACGCGTGTTTGAAATGATTGAATAGCTATAGATAAAATTGAAACTTCTGCAGGGTTCTGTTTAGAACAATTGATCTTGAGTGTAGAGGCTGTTGTTCCTTTTGTAAAGATTGTATAGGCATTCAGAAAATATTGCGTAGTCCTTTGACACTTAGCTTTTTTTTTTTTTTTTTTTATCTTTCTTTGAATGTTGTTTTTATCCATAATCCCAACTTCTGTGAAGTTTCATTGTCTAGCTTTCTGGATTTTTTATGTTGCTGTGCTTGTTGTAACTGACATTTTTTTCTTTTGCAGATATGCTGCTGTATTTGCTGCGTTTGTTGCAGGGTTGGCCTGTACGGTTGGTATTGACTTTGGTGCAAAGTTTATGGCTTCCTTTGCCAAATGTTTTGAGGTATAGCTCGTTAACAAAATAACAAAGTAAATTAAAGTCCAGTTTAACATATTTGTTTATTATCTGTTTCATTTGTCGGTTTTGGTTTCTTCTCCAAATCATCATTTGCTTTCACTGCAGTGTTCTGAAGACTACAAAATTATAATCTTCATATGTTTTCTGCGCAGGATGAGTATCATAAACAAGACAATCTCTCCTTGCGGAATATTGCTCTTCTCTTATCTTATTTATGCATATTTGGAGTTTGTTCTAGGTGGGTAAATTGCAATGCACCAAGCACTATATAATAACATTTTAACTATACTTTCCTAATAAATATCTCTTTTGATGCTTTTCAGTGATTTAATATTTGACTTTCTAATCATGCTGAGTAAGCGTTTGACTGAGGTGGATGTCGCTATTATTTTGACTGTGTTACAAAGTAAGTTTTTGTCTTCATAAATCTCTTGCAGTTTTGGTTGGTTTGCATTCTGCTTTATTCCAAATTATAGAAGCCCGTGCAGTTCCCTTCAAATCCTCATTTGTAACTGCTGACTGCTGGATCATCATTTACTAAATTCTAAGACTATTTTCCTTTATAGAAGAATTTCTACTTCGTTGATATCATAGTGTTTGTTTTGTTGGGTTGGACGGACCGCTCTGGCACTTAGGAACTGAACGATTCAAATTTAAATTTCAATAAGCACTTGGGGTTCATTTGGCTAACTTAAAACTTTTTTTTTTTTTGAAGAAGCTAAACTAGCCCACATAAATTGGCACCGGGGAGAATCGAATCTGAGACCTTGAAGGAGGAGCACACTCCTAGCTCCCAAACCAATACCGCCAAACCAACGCAAATGGGTTTGGCTAACTCAAAACTATTGGATAGCTTCAGTCGTAAAGTGTAATTTTGAATTGTTCATTAAGAGGGTTAACCAAGCTTGGCTAGGTTAGCCTCAGAATCCAAGGGTTTATCAAGCACTTGGCAATCCTCTCCTCACTCCTTGAGCTAACTTTTGGGGTCGAGTTAGGTTTAGCCCAAAATCTTAAGATATCAAATCATATCCTAGATCTTTTATTGGGCCACTCATATTTGTCCGTAATCCATATGTCTAATCATAGGTGTGACGGGTATGTTGAGATTCCACATCAACTACAGGTGTGACCAATTTGTCCTTATAGCGCTCGATGAATTCTTAGCTCTTGCCCCTTGAACTAGATTTTGGAGTTAGTTAAGCCTAGCTCAAATTCTAAGACAATTAATGCAATGTACTTATATACATCATTATTTACATAAATTCCACAGTTGATTATTAATATCATCTCTATGTTTACATTTTTATCATGTTTACTGCATGCATAGCCATAAGACCGGTCATGCTGTATAGAACTGCTATTATCCCCTTTATTTCTCCCTTTTTCTGTTCATGTTGATGGGTTCCGTGTAATATGCATAGCCATAAGACCCGTGATGCTGTATAGAACTGCTATTATCCCCTTTATTTCTCCCTTTTTTGTTCAAGTTGATGGGTTCAATGTAATATTATACTGTAGCATGACTTTTTTAGACTTTTCTCATAGGAGCTTGCTCAAATAGGAAACCATGATTATTTTTATTGTATTTGTCTTCATAGGTTGTGGGATGATTACTTGGCTGCTGTTGCTATCAGTGCAGGGGTTTGGCTTTTAGAGCTCTGAACCTTGCATTTAGCAACAATAGCAGCAAATTGTAATAAGGTTCCAATCTTAGTTTGTTTTTCAGAGGAAGTGGTTCTTGAATCACTTTTAGTTGGGATTTTCGTCTCTCCTTCTTTAGAAGTGGTTATAGGCTTCTTCAGGAGGATGCATGCATAACTGCTTTAGTCTATTTTCTTGTTTAATTGGGTTTTGGCTTTGTCCCCCCAATATTGTACCTTTTCTTTTTTCTTTTTAATAAATTCCGTTGCTTTATAAAAAAATATAGGTTGTGGGATGAAAATAAGGGCTGATGACCCCGCTGCCATGAAAACATTCATTGTTAATGTTCAGGACACGTCAAATAAGATGAAGGCTTCCTCTGGAGATGGTCCTGAAAAGAATAACAGTAAAAGAGTAAGCATGCAAAGTGCATGTTTTGTTTTGCATTTGAAAGTCCCAAACCATGGCTTCGGCAAAACCTTGTCTCTTGTAGCTTTTGCAAACCACGGTTTGGAGACTTTGAATACAAAACCAAACACACTGTTTTATCATTACTTGTCAGAAAACTGCCTCTAGTTTTTCTGCCCATAGTTCAGCACTGATTACTTGGTAACACTTGTAGATGGAGTTCATGCTTGAAACCATATATGACATCAAGAACAACAAGAAGAAGGCAGAAGAGGTTAACCCTCGAATTAAAAAGTGGCTACAGAAGGTCCTATTCTCTGATCCATGTTTTATGGCATTTTTTATTATTTGAGTTCCTTTCTGTGAATATATTACATTTTATGTTCCGCCATAGCTTATTTTCAAAATATAATGGAATTCCTTACAAACCACAACCATGGCCTTTTTCATTAGGTGAGATCATCTACATGCGTTAAAGAAACTTAAATGACACCGTAAAACATGGAATTCCTTAACTGGTACTGGTGCTATAAAACTCTTACCATGTTAGGGTCCAGGGAAGTGTCGGACCCGTTATGGGTCTATTTAAACAGCAGTACCTTGGATTTACATCATAACTCGAATTTATGACCTTCTGAATTCCAATGACCCAGCAGCTTTGAAACATGGGTACTCTAAAAATGGTGAAGTACCCGTACCGGGTAAGCACCAGTACTGGGTACGCATACCATACCTGCACCTATGCATCATAGCCCAGCGGCTACTCCAACTGTTGTATTGTGTAGGTAGTACTTATCTAATGTCCAACTTTCTTCTGATAGAGGGCATTCTTTTTTGCATTTTCTCTCCTTTGATTAGCATACCATTAATGCAGTGCTAAAAGATTTTTTTTAATGACTTTACTTGGCCAGCACAAAACTGAAGTTCCTCTGATTGTGATCCTTGCTGGAAATGATATTATTTATTAGACCAAATCGTGCATTTTATTTTCTGAAATTATTCTAACATATATAATTGAAGGGTAACCTTGGCGCAACTGGTAAAGTTGTTGTCATGTGACTGAAAGGTCACAGGTTCAAGTCTTGGAAACAGCCTCTTGTGTAAAAAACAAGGTAAGACTGCGTACAATACACCAAATGGTGGGACCCCTTCCTAGACCCTGCGTATGCGGGAGCTTTAGTGCACCGGGTTGCCCTTTTTTATTCAAACATATATAATTGAAGATCCTAGCTTTAGATACTACGGTTTATTTAGGAATAGTAACGAGGACTTGTTGAAGTCATTTGCTTATTGAAAGATGAGGTGTTAACTTTATTTGCCTAGTGGCTTGTAAATTGCTTTCTTCAAATTCTTGTTATGTTGTTTGTCTTTTTACTTGGAACGTGATAGATGCATTGTGTTAACCATATTTAGTTCTGTCATTATTAACAGTTTCTTTCAGTAGATCTGAATCAGTAATTGTTCTGTGAACATTCTCTTACAGTTACTGTAATCTATATAATAGAACAAATAGCTTTTACAGTTACTGAATCAGTAATTGCCGTCTGTCTTTTTACTTGGCACGTGATATATACATTGTGTTAGTTAACCATAGTTCTGTCATTATTAACAGTTTCTGGTAGTTATGGATCAATAAGTGTTCTGGTAACATTCTTTTACAGTTACTATCAGCTATATATACAGTGTGACTCAGTTCTATGTAAGAAAATCATTTGTATCCTTACTTACAAAACATTGCGAACTCTCTTTCTCCTTTTTTTTCCCTGATTTTCTATCACTTTCGCTTGCATTCTCATAAGCCTATAACATTAAACACTAATAAATGTATTATTGAAAAGAAAATTCTTGTTTCAGATTGCTATTTGATTTTTTTTCTGTTAATCAACAAGCATTCATTTGTCCCTCAAATTCTTAATTTGAACTTTGTTTCCAGTTAAGAGTTGATGATATTTCAATTAGAGGGCTTACATGGAGTAAGTTACTTGATCCTGACAAGAAGGGCCAATGGTGGTTGTCCGGAGATATGGTTTCAGCAACAGATAATGTTGAAGAAGTTGCCAACAAAATAGACAAAGATGTGGCTGAAACCCAACGAATGTTGCAGCTTGCTGCTGCTCAAAGGATGAACACAGATTCCAGAAGGGCAATCTTTTGTATTATAATGTCTGGGGAGGACTATATTGATGCATTTGAAAAGCTTCTAAGATTAGAACTACCGGGCAAGCAGGTCAGCCATTTTTTCTCTGGTTCGTAATGTCTTCTTCGAATTATGAGGCCTTCCATGTTGTGATATATTTTTCGTTCATGTGCTTTAGGACAGAGATATAATGCGGGTTCTTGTTGAGTGTTGCTTGCAAGAGAAAGTTTTTAACAAGTACTATACAGTGCTGGCTTCCAAGTTGTGTGAGCATGACAAAAATCACAAGTTTACTCTACAGGTAATTTTTTTTCTTTAGGTTAGATCTAATCCAAATTTTAATATAGTTTCAAAATTCAAACTCTATCCTAGATTTGTTATTGGATCACTTGTATTTGTTCACATTACATATGTCTAGTCCTGGGTATGAAAAGGGTGTTAAGATCTCTGTTGTTGGGCCATCCGCAGTTGTCAACATTTCATATGTGTGTGTTAAGATCCCACATCAGCTAGTAATATTGCCAAACTAGTCCTTCTAAGGCTTGAAAATGGAATTTGATTTAATTGACATTATGATAATAATACCTTTGCCTTTTATTTGCAGTTTTGCCTATGGGACCACTTTAAGGAGCTGGAGTCTATGGCTCTTTTGAGATCAATGCACCTAGCAAAGTTTGTGGCTGAAATGGCTGCCTCTTTTACTCTCTCCCTTGCAGTTTTGAAAACTGTGGATCTGAGTGATATCACCCAGCTAACCCCAAAAAGGATTATGCATTTCCGCATTCTGTTTGAGGCCATTTTCGAATATCCAGAAACCGTGGTGTGGAAGATATTTACACGTATAGCAGGGACCCCGGAACTTGAAGGTTTTAGACAAGGCATTGAGTTTTTCATTAAGGAGTACATTGTGAAAACAAATAAAGCTGCATCTCAAAAATTTAAGTTGGTAAAAAGAGCCCTTAATAACATAGAAGGAGTCCTGATGCAAGAGTAA

Protein sequence

>MS.gene042462.t1

MVEQTAEKSRRERRKESRLAKNASKYQSWLQHHQKSEAIKRTNNQNPELKSQTKLDQPVSPSINETQVAKKSKSSSKKKVAAEECALSEDEIGAPVVRKVKKGSQKSSKKKNRVEMGLSDISMAAQMDLELERKLSKKLKVKEGKLRGLDDGLNMLFEGMPSADDLFGDMEGFDSDELPRRKTKKSSSSKKRKLSKEEMETEGPVEARNQDAVFEEVPNSGTSRKKKKDKKRKLSSQELEDGAEDDAVCIDKPVESSGADMTLGDAAADVSEKKVIGKYIAPHLRGRAGNEPEEHTQIRRRVRGLLNRISESNVESITGELSLIFQSVARSVASQIMIEETLASCSGGPRGNKQYAAVFAAFVAGLACTVGIDFGAKFMASFAKCFEDEYHKQDNLSLRNIALLLSYLCIFGVCSSDLIFDFLIMLSKRLTEVDVAIILTVLQSCGMKIRADDPAAMKTFIVNVQDTSNKMKASSGDGPEKNNSKRMEFMLETIYDIKNNKKKAEEVNPRIKKWLQKLRVDDISIRGLTWSKLLDPDKKGQWWLSGDMVSATDNVEEVANKIDKDVAETQRMLQLAAAQRMNTDSRRAIFCIIMSGEDYIDAFEKLLRLELPGKQDRDIMRVLVECCLQEKVFNKYYTVLASKLCEHDKNHKFTLQFCLWDHFKELESMALLRSMHLAKFVAEMAASFTLSLAVLKTVDLSDITQLTPKRIMHFRILFEAIFEYPETVVWKIFTRIAGTPELEGFRQGIEFFIKEYIVKTNKAASQKFKLVKRALNNIEGVLMQE