Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034046.t1 | XP_013454685.1 | 60.4 | 568 | 65 | 6 | 1 | 422 | 67 | 620 | 2.80E-141 | 511.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034046.t1 | A0A072UH09 | 60.4 | 568 | 65 | 6 | 1 | 422 | 67 | 620 | 2.0e-141 | 511.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034046.t1 | MTR_4g011300 | 93.333 | 270 | 7 | 1 | 153 | 422 | 362 | 620 | 2.20e-169 | 489 |
| MS.gene034046.t1 | MTR_4g011300 | 66.887 | 151 | 42 | 3 | 7 | 152 | 73 | 220 | 7.88e-52 | 184 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034046.t1 | AT1G15420 | 55.670 | 194 | 74 | 4 | 167 | 358 | 35 | 218 | 3.53e-60 | 197 |
| MS.gene034046.t1 | AT1G15420 | 55.491 | 173 | 65 | 4 | 167 | 337 | 35 | 197 | 1.01e-51 | 173 |
Find 86 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCAGCTCTGTGTCATTCT+TGG | 0.154928 | 4.4:-88172935 | None:intergenic |
| TCCCCAATTGTTTGCTCATT+TGG | 0.165741 | 4.4:-88172874 | None:intergenic |
| TCATTCTAGGGGTGCAATTT+TGG | 0.170768 | 4.4:+88173764 | MS.gene034046:intron |
| CACAACTGACAAGGTGGATT+TGG | 0.246483 | 4.4:+88172240 | MS.gene034046:CDS |
| AAAGTAAACATCTTCAAGTT+TGG | 0.308192 | 4.4:+88171183 | MS.gene034046:CDS |
| ACTGACTAATCTCAATTTAC+TGG | 0.335974 | 4.4:+88172900 | MS.gene034046:CDS |
| AACTTGCTCTTTGTCACTCT+TGG | 0.336193 | 4.4:-88172968 | None:intergenic |
| GGGACACTTACCATATCATT+AGG | 0.336661 | 4.4:-88171020 | None:intergenic |
| TCCGTGTCCACATAGATAAT+TGG | 0.336735 | 4.4:-88174594 | None:intergenic |
| GATCCAAATGAGCAAACAAT+TGG | 0.355713 | 4.4:+88172871 | MS.gene034046:CDS |
| TCAGTTGTGGTTGGAAGATC+AGG | 0.364295 | 4.4:-88172226 | None:intergenic |
| GGAGGTGTGGACTTAAGTTT+AGG | 0.365675 | 4.4:+88171204 | MS.gene034046:CDS |
| GGACAGCTTCTTTGTGTTGT+TGG | 0.373076 | 4.4:+88170725 | MS.gene034046:CDS |
| AGATGACCGCACCCTTCTTC+TGG | 0.376441 | 4.4:+88173050 | MS.gene034046:CDS |
| CGAGTTATAAGTTGGGAAAC+TGG | 0.378633 | 4.4:+88170978 | MS.gene034046:CDS |
| CTTTGTGTTGTTGGACATGA+TGG | 0.379769 | 4.4:+88170734 | MS.gene034046:CDS |
| TAAGAGAATTAAGTAGTTTG+AGG | 0.391173 | 4.4:-88173237 | None:intergenic |
| TTATATCCATTATTGAATCT+AGG | 0.394282 | 4.4:+88173257 | MS.gene034046:CDS |
| TCTGAAGTGCCCTAATGATA+TGG | 0.401133 | 4.4:+88171010 | MS.gene034046:CDS |
| GCTATCTTTGTCAGTGTCCA+TGG | 0.417175 | 4.4:-88174643 | None:intergenic |
| ATCCAAATGAGCAAACAATT+GGG | 0.422843 | 4.4:+88172872 | MS.gene034046:CDS |
| ACAACTGACAAGGTGGATTT+GGG | 0.423409 | 4.4:+88172241 | MS.gene034046:CDS |
| GTATTACCTAGATTCAATAA+TGG | 0.432211 | 4.4:-88173263 | None:intergenic |
| GTCAGTGTCCATGGCATCCT+CGG | 0.432229 | 4.4:-88174634 | None:intergenic |
| TTGGAAGACAGATTTAAAAG+TGG | 0.432645 | 4.4:-88174417 | None:intergenic |
| CTCGCTGTTGATGTTTCCAC+TGG | 0.439393 | 4.4:+88169786 | MS.gene034046:CDS |
| TTAGCTCTCGGAACGGAAGA+TGG | 0.440496 | 4.4:+88169756 | MS.gene034046:CDS |
| ATGAGTTTAATATCTGAAAC+AGG | 0.446471 | 4.4:+88170765 | MS.gene034046:CDS |
| CTAGACTACGAGTTATAAGT+TGG | 0.457270 | 4.4:+88170970 | MS.gene034046:CDS |
| TCTTCACTGGCTTTCTCACA+TGG | 0.458648 | 4.4:+88170830 | MS.gene034046:CDS |
| TTTCCACTGGTGAGAGGAAG+TGG | 0.461504 | 4.4:+88169799 | MS.gene034046:CDS |
| GGACACTTACCATATCATTA+GGG | 0.477340 | 4.4:-88171019 | None:intergenic |
| TGTCTAAGAAACTTGAGAGT+TGG | 0.481539 | 4.4:-88174436 | None:intergenic |
| TGAGAAAGCCAGTGAAGAGA+TGG | 0.482130 | 4.4:-88170825 | None:intergenic |
| GCTCATTTGGATCATCATCA+AGG | 0.491997 | 4.4:-88172861 | None:intergenic |
| ATTAAGTAGTTTGAGGACGT+TGG | 0.492657 | 4.4:-88173230 | None:intergenic |
| GATAATCTTAGTGACGTTGA+AGG | 0.493113 | 4.4:+88174696 | MS.gene034046:CDS |
| ACTGAAAGCAGCAGTAGAAA+AGG | 0.494658 | 4.4:+88172165 | MS.gene034046:intron |
| GTAAACATCTTCAAGTTTGG+AGG | 0.497984 | 4.4:+88171186 | MS.gene034046:CDS |
| AGTAGTTTGAGGACGTTGGA+TGG | 0.498447 | 4.4:-88173226 | None:intergenic |
| GATCAATGTGAGGTTGTTGA+TGG | 0.503198 | 4.4:+88172835 | MS.gene034046:intron |
| AGAAGCTTACCCCGGTGTAA+AGG | 0.512950 | 4.4:-88174460 | None:intergenic |
| TGTACAAGCAATCCAGAAGA+AGG | 0.518949 | 4.4:-88173062 | None:intergenic |
| TGAAGGTAGTGATGGTATGA+TGG | 0.520944 | 4.4:+88174713 | MS.gene034046:CDS |
| CATCTTCAAGTTTGGAGGTG+TGG | 0.521167 | 4.4:+88171191 | MS.gene034046:CDS |
| GTTCCGAGAGCTAATAAGTA+AGG | 0.523266 | 4.4:-88169747 | None:intergenic |
| CAAATCCACCTTGTCAGTTG+TGG | 0.523283 | 4.4:-88172239 | None:intergenic |
| ACTGACAAAGATAGCAAAGA+AGG | 0.524530 | 4.4:+88174651 | MS.gene034046:CDS |
| TCCACCTTGTCAGTTGTGGT+TGG | 0.526474 | 4.4:-88172235 | None:intergenic |
| AAGTTGGGAAACTGGTAAAG+AGG | 0.528152 | 4.4:+88170986 | MS.gene034046:CDS |
| TCATCATACAGTGGGATTTG+CGG | 0.532835 | 4.4:+88170683 | MS.gene034046:intron |
| GGACCTTACTTATTAGCTCT+CGG | 0.532898 | 4.4:+88169744 | MS.gene034046:CDS |
| GTAGTTTGAGGACGTTGGAT+GGG | 0.548008 | 4.4:-88173225 | None:intergenic |
| ATCCAAGAATGACACAGAGC+TGG | 0.556575 | 4.4:+88172933 | MS.gene034046:CDS |
| TTCTTAGACATCCTTTACAC+CGG | 0.558696 | 4.4:+88174449 | MS.gene034046:CDS |
| CTTGTACACGCAAGATGAGA+AGG | 0.561271 | 4.4:+88173077 | MS.gene034046:CDS |
| TAGACTACGAGTTATAAGTT+GGG | 0.563426 | 4.4:+88170971 | MS.gene034046:CDS |
| TGAAACAGGAGAGCTTCTAA+AGG | 0.570461 | 4.4:+88170779 | MS.gene034046:CDS |
| TCTACACTATCTGCACTTGG+AGG | 0.572947 | 4.4:-88173000 | None:intergenic |
| AAGAGAATCCGAGGATGCCA+TGG | 0.575249 | 4.4:+88174626 | MS.gene034046:CDS |
| TTTGTGTTGTTGGACATGAT+GGG | 0.577817 | 4.4:+88170735 | MS.gene034046:CDS |
| TGCAAGTGGAATAATGTCCC+AGG | 0.578119 | 4.4:+88173827 | MS.gene034046:CDS |
| AACAGTGCCAATTATCTATG+TGG | 0.590133 | 4.4:+88174587 | MS.gene034046:CDS |
| CTGACAAAGATAGCAAAGAA+GGG | 0.592191 | 4.4:+88174652 | MS.gene034046:CDS |
| AGAAGTAGACATTTCAGCCA+TGG | 0.592596 | 4.4:-88173798 | None:intergenic |
| ACATCTACACTATCTGCACT+TGG | 0.592728 | 4.4:-88173003 | None:intergenic |
| CTACTTCTACAGCATGCAAG+TGG | 0.594965 | 4.4:+88173813 | MS.gene034046:CDS |
| GAGAAAGCCAGTGAAGAGAT+GGG | 0.595586 | 4.4:-88170824 | None:intergenic |
| GCCAATTATCTATGTGGACA+CGG | 0.599140 | 4.4:+88174593 | MS.gene034046:CDS |
| TCTTAGACATCCTTTACACC+GGG | 0.601967 | 4.4:+88174450 | MS.gene034046:CDS |
| TGTTGTTGGACATGATGGGA+AGG | 0.606171 | 4.4:+88170739 | MS.gene034046:CDS |
| TCTTCCAACCACAACTGACA+AGG | 0.614649 | 4.4:+88172231 | MS.gene034046:CDS |
| TCCAAATGAGCAAACAATTG+GGG | 0.618540 | 4.4:+88172873 | MS.gene034046:CDS |
| AGTGACGTTGAAGGTAGTGA+TGG | 0.620717 | 4.4:+88174705 | MS.gene034046:CDS |
| TGAATAGGTGCTTGACGAGG+AGG | 0.621235 | 4.4:+88174551 | MS.gene034046:intron |
| TTACTTATTAGCTCTCGGAA+CGG | 0.621773 | 4.4:+88169749 | MS.gene034046:CDS |
| TTGATGTTTCCACTGGTGAG+AGG | 0.633142 | 4.4:+88169793 | MS.gene034046:CDS |
| TGATAGTGAAAGAGAATCCG+AGG | 0.642868 | 4.4:+88174617 | MS.gene034046:CDS |
| TGACAAAGATAGCAAAGAAG+GGG | 0.645803 | 4.4:+88174653 | MS.gene034046:CDS |
| AGGCCACTTCCTCTCACCAG+TGG | 0.645921 | 4.4:-88169802 | None:intergenic |
| TCCAACCACAACTGACAAGG+TGG | 0.646455 | 4.4:+88172234 | MS.gene034046:CDS |
| AGCAATCCAGAAGAAGGGTG+CGG | 0.646504 | 4.4:-88173056 | None:intergenic |
| GTACAAGCAATCCAGAAGAA+GGG | 0.650839 | 4.4:-88173061 | None:intergenic |
| TGTTGAATAGGTGCTTGACG+AGG | 0.666788 | 4.4:+88174548 | MS.gene034046:intron |
| ATTTAATGTAGATCAATGTG+AGG | 0.722303 | 4.4:+88172825 | MS.gene034046:intron |
| CTTAGACATCCTTTACACCG+GGG | 0.742537 | 4.4:+88174451 | MS.gene034046:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAGAAATAAATTCAAA+TGG | - | chr4.4:88169860-88169879 | None:intergenic | 10.0% |
| !! | TTAACATTCAAAAAATAAAT+TGG | - | chr4.4:88172768-88172787 | None:intergenic | 10.0% |
| !!! | ATTTTTTGAATGTTAATTAT+TGG | + | chr4.4:88172772-88172791 | MS.gene034046:intron | 10.0% |
| !! | AAGAACAACAAATTATATAA+CGG | - | chr4.4:88170650-88170669 | None:intergenic | 15.0% |
| !! | ATAAAACATGAAATTCTATT+TGG | + | chr4.4:88172037-88172056 | MS.gene034046:intron | 15.0% |
| !! | ATGTATAAATAAGAGAAATA+AGG | + | chr4.4:88171858-88171877 | MS.gene034046:intron | 15.0% |
| !! | CTATTAAGAATAAAAGAAAA+AGG | + | chr4.4:88172512-88172531 | MS.gene034046:intron | 15.0% |
| !! | CTTAAATATTTAGTGATTTA+GGG | + | chr4.4:88171570-88171589 | MS.gene034046:intron | 15.0% |
| !! | TCTTAAATATTTAGTGATTT+AGG | + | chr4.4:88171569-88171588 | MS.gene034046:intron | 15.0% |
| !! | TGAAATTAAAAATCTAGAAA+TGG | - | chr4.4:88173382-88173401 | None:intergenic | 15.0% |
| !! | TGTATAAATAAGAGAAATAA+GGG | + | chr4.4:88171859-88171878 | MS.gene034046:intron | 15.0% |
| !! | TTAAATATTTAGTGATTTAG+GGG | + | chr4.4:88171571-88171590 | MS.gene034046:intron | 15.0% |
| !! | TTTATTAAATATACAATGCA+TGG | - | chr4.4:88169995-88170014 | None:intergenic | 15.0% |
| !!! | AATCGATACATTTTTAAATA+TGG | - | chr4.4:88170542-88170561 | None:intergenic | 15.0% |
| !!! | AATTTTTGTATACTTCATAT+TGG | + | chr4.4:88170465-88170484 | MS.gene034046:intron | 15.0% |
| !!! | ATAATTATGATACTTGTTAA+AGG | - | chr4.4:88173659-88173678 | None:intergenic | 15.0% |
| !!! | ATCGATACATTTTTAAATAT+GGG | - | chr4.4:88170541-88170560 | None:intergenic | 15.0% |
| !!! | GTTATAAATCTACAATTTTT+GGG | + | chr4.4:88174100-88174119 | MS.gene034046:intron | 15.0% |
| !!! | TAATATTTTAAATTGTTTGC+TGG | + | chr4.4:88172273-88172292 | MS.gene034046:intron | 15.0% |
| !!! | TAATTATGATACTTGTTAAA+GGG | - | chr4.4:88173658-88173677 | None:intergenic | 15.0% |
| !!! | TGTTATAAATCTACAATTTT+TGG | + | chr4.4:88174099-88174118 | MS.gene034046:intron | 15.0% |
| !! | AAAAGAAAAATTCATTGTGA+AGG | + | chr4.4:88171920-88171939 | MS.gene034046:intron | 20.0% |
| !! | AAAAGAAAGAGAAAATAACT+TGG | - | chr4.4:88173686-88173705 | None:intergenic | 20.0% |
| !! | AAAGAAAAATTCATTGTGAA+GGG | + | chr4.4:88171921-88171940 | MS.gene034046:intron | 20.0% |
| !! | AATGTTTAATAAAATTGCAC+TGG | + | chr4.4:88170263-88170282 | MS.gene034046:intron | 20.0% |
| !! | AGATATGAAATGCATATAAT+TGG | - | chr4.4:88173961-88173980 | None:intergenic | 20.0% |
| !! | AGGATTATTAACAGAAAAAA+TGG | + | chr4.4:88173562-88173581 | MS.gene034046:intron | 20.0% |
| !! | ATTCAAAAAATAAATTGGAG+TGG | - | chr4.4:88172763-88172782 | None:intergenic | 20.0% |
| !! | GAAAACTGGTAATAATATTA+AGG | - | chr4.4:88170567-88170586 | None:intergenic | 20.0% |
| !! | GCAAATATTAAATTTGTCAT+TGG | + | chr4.4:88170097-88170116 | MS.gene034046:intron | 20.0% |
| !! | GCACAATAAATAGATAAAAA+AGG | - | chr4.4:88174376-88174395 | None:intergenic | 20.0% |
| !! | GTTAATTATAACCATTTGTT+TGG | - | chr4.4:88173635-88173654 | None:intergenic | 20.0% |
| !! | TTATATCCACAATAAGTAAT+GGG | - | chr4.4:88171043-88171062 | None:intergenic | 20.0% |
| !! | TTATATCCATTATTGAATCT+AGG | + | chr4.4:88173257-88173276 | MS.gene034046:CDS | 20.0% |
| !! | TTTATATCCACAATAAGTAA+TGG | - | chr4.4:88171044-88171063 | None:intergenic | 20.0% |
| !!! | AAATATTTAAGACTGTAAAC+TGG | - | chr4.4:88171561-88171580 | None:intergenic | 20.0% |
| !!! | AATAGTTTTACTTTGTTCAA+TGG | - | chr4.4:88169937-88169956 | None:intergenic | 20.0% |
| !!! | AATGTCACAATTTTTTTAGT+TGG | + | chr4.4:88172065-88172084 | MS.gene034046:intron | 20.0% |
| !!! | AATTAAATATTTTGCATCAC+TGG | - | chr4.4:88171150-88171169 | None:intergenic | 20.0% |
| !!! | AATTATGATACTTGTTAAAG+GGG | - | chr4.4:88173657-88173676 | None:intergenic | 20.0% |
| !!! | AATTGGTAATTTAAAAGACA+TGG | - | chr4.4:88173944-88173963 | None:intergenic | 20.0% |
| !!! | ATACATTTTTAAATATGGGA+TGG | - | chr4.4:88170537-88170556 | None:intergenic | 20.0% |
| !!! | ATAGCTAAATATTTTTCATC+TGG | - | chr4.4:88170942-88170961 | None:intergenic | 20.0% |
| !!! | ATAGTTTTACTTTGTTCAAT+GGG | - | chr4.4:88169936-88169955 | None:intergenic | 20.0% |
| !!! | ATATGTTCTTTTCAAAATTC+AGG | - | chr4.4:88172419-88172438 | None:intergenic | 20.0% |
| !!! | ATGTCACAATTTTTTTAGTT+GGG | + | chr4.4:88172066-88172085 | MS.gene034046:intron | 20.0% |
| !!! | ATTGGTAATTTAAAAGACAT+GGG | - | chr4.4:88173943-88173962 | None:intergenic | 20.0% |
| !!! | TACATTTTTAAATATGGGAT+GGG | - | chr4.4:88170536-88170555 | None:intergenic | 20.0% |
| !!! | TGCACTATTATTTTTTTGAA+TGG | + | chr4.4:88172712-88172731 | MS.gene034046:intron | 20.0% |
| !!! | TGGTTTCACATTTTATATTT+TGG | - | chr4.4:88170172-88170191 | None:intergenic | 20.0% |
| !!! | TGTTGATATGTTTCATTTTT+AGG | + | chr4.4:88171821-88171840 | MS.gene034046:intron | 20.0% |
| !!! | TTAGCTTTAATAAGACAATT+TGG | + | chr4.4:88172606-88172625 | MS.gene034046:intron | 20.0% |
| !!! | TTATTTTCTCTTTCTTTTAC+AGG | + | chr4.4:88173688-88173707 | MS.gene034046:intron | 20.0% |
| !!! | TTTTCTGTTAATAATCCTAA+AGG | - | chr4.4:88173560-88173579 | None:intergenic | 20.0% |
| ! | AAACATTGCTTTCATTTCAT+AGG | - | chr4.4:88170250-88170269 | None:intergenic | 25.0% |
| ! | AACAGTAATCTCAATTTCAA+TGG | - | chr4.4:88172375-88172394 | None:intergenic | 25.0% |
| ! | AACATTGCTTTCATTTCATA+GGG | - | chr4.4:88170249-88170268 | None:intergenic | 25.0% |
| ! | AAGAAAAATTCATTGTGAAG+GGG | + | chr4.4:88171922-88171941 | MS.gene034046:intron | 25.0% |
| ! | AAGATAAATCAACATGCAAA+TGG | - | chr4.4:88172649-88172668 | None:intergenic | 25.0% |
| ! | AATAGCGAAAGTTAAAGAAA+AGG | + | chr4.4:88171443-88171462 | MS.gene034046:intron | 25.0% |
| ! | ACAGTAATCTCAATTTCAAT+GGG | - | chr4.4:88172374-88172393 | None:intergenic | 25.0% |
| ! | AGAAATAAGGGTAGAAAAAT+GGG | + | chr4.4:88171871-88171890 | MS.gene034046:intron | 25.0% |
| ! | ATTAAATATACAATGCATGG+AGG | - | chr4.4:88169992-88170011 | None:intergenic | 25.0% |
| ! | ATTTAATGTAGATCAATGTG+AGG | + | chr4.4:88172825-88172844 | MS.gene034046:intron | 25.0% |
| ! | CAAAAAAATAATAGTGCAGA+TGG | - | chr4.4:88172710-88172729 | None:intergenic | 25.0% |
| ! | CATGTAACAAGATTATTGTT+AGG | - | chr4.4:88170890-88170909 | None:intergenic | 25.0% |
| ! | CTAACAATAATCTTGTTACA+TGG | + | chr4.4:88170888-88170907 | MS.gene034046:intron | 25.0% |
| ! | GATTCAATTGTTCAACAAAT+TGG | + | chr4.4:88174252-88174271 | MS.gene034046:intron | 25.0% |
| ! | GCAAAGCATAAATACATTAA+TGG | - | chr4.4:88172443-88172462 | None:intergenic | 25.0% |
| ! | GTATTACCTAGATTCAATAA+TGG | - | chr4.4:88173266-88173285 | None:intergenic | 25.0% |
| ! | TAAATGGAACCAAAAAATGA+GGG | - | chr4.4:88171708-88171727 | None:intergenic | 25.0% |
| ! | TAACAAGATTATTGTTAGGA+TGG | - | chr4.4:88170886-88170905 | None:intergenic | 25.0% |
| ! | TAAGAGAATTAAGTAGTTTG+AGG | - | chr4.4:88173240-88173259 | None:intergenic | 25.0% |
| ! | TAATTTCTAATGTGTTACAC+TGG | - | chr4.4:88170419-88170438 | None:intergenic | 25.0% |
| !! | AAAGTAAACATCTTCAAGTT+TGG | + | chr4.4:88171183-88171202 | MS.gene034046:CDS | 25.0% |
| !! | ACCAACTATAAAGTCTTTTT+GGG | - | chr4.4:88170124-88170143 | None:intergenic | 25.0% |
| !! | ATGAGTTTAATATCTGAAAC+AGG | + | chr4.4:88170765-88170784 | MS.gene034046:CDS | 25.0% |
| !! | ATTGTATATTTTCCCTGTTA+AGG | - | chr4.4:88171113-88171132 | None:intergenic | 25.0% |
| !! | TTCTTTTCTTTCTCATTCTA+GGG | + | chr4.4:88173752-88173771 | MS.gene034046:intron | 25.0% |
| !! | TTTCCATATAGTTTTTGCTA+AGG | + | chr4.4:88172551-88172570 | MS.gene034046:intron | 25.0% |
| !! | TTTCTTTTCTTTCTCATTCT+AGG | + | chr4.4:88173751-88173770 | MS.gene034046:intron | 25.0% |
| !!! | AAACTTTTAAAGAAGATTCC+TGG | - | chr4.4:88173848-88173867 | None:intergenic | 25.0% |
| !!! | AACTTTTAAAGAAGATTCCT+GGG | - | chr4.4:88173847-88173866 | None:intergenic | 25.0% |
| !!! | AATTATTGGTGAAGTATTGA+TGG | + | chr4.4:88172786-88172805 | MS.gene034046:intron | 25.0% |
| !!! | ATCTACAATTTTTGGGTAAT+TGG | + | chr4.4:88174107-88174126 | MS.gene034046:intron | 25.0% |
| !!! | CTAAATTACTTTTGGATCTT+TGG | + | chr4.4:88170859-88170878 | MS.gene034046:intron | 25.0% |
| !!! | GAATTTGTTGGTCAAAATTT+TGG | + | chr4.4:88173533-88173552 | MS.gene034046:intron | 25.0% |
| !!! | TGAAGTATTGATGGTATTTT+TGG | + | chr4.4:88172795-88172814 | MS.gene034046:intron | 25.0% |
| !!! | TGTTTCATTTTTAGGATAGA+CGG | + | chr4.4:88171829-88171848 | MS.gene034046:intron | 25.0% |
| !!! | TTTACTTTTATGCCTTAACA+GGG | + | chr4.4:88171098-88171117 | MS.gene034046:intron | 25.0% |
| !!! | TTTTACTTTTATGCCTTAAC+AGG | + | chr4.4:88171097-88171116 | MS.gene034046:intron | 25.0% |
| !!! | TTTTCAGGGTTATTTTAGTT+CGG | - | chr4.4:88171396-88171415 | None:intergenic | 25.0% |
| AAAAGGCAAGAATTACTAGT+TGG | - | chr4.4:88174359-88174378 | None:intergenic | 30.0% | |
| AAAATGTGAAACCAATGTCT+GGG | + | chr4.4:88170178-88170197 | MS.gene034046:intron | 30.0% | |
| AAAGCAGCATAATCAACATA+TGG | - | chr4.4:88170601-88170620 | None:intergenic | 30.0% | |
| AAATGGAACCAAAAAATGAG+GGG | - | chr4.4:88171707-88171726 | None:intergenic | 30.0% | |
| AAGTAAGTTAAATGCTCCAT+GGG | - | chr4.4:88173337-88173356 | None:intergenic | 30.0% | |
| ACACCTTAGCAAAAACTATA+TGG | - | chr4.4:88172557-88172576 | None:intergenic | 30.0% | |
| ACATTGCTTTCATTTCATAG+GGG | - | chr4.4:88170248-88170267 | None:intergenic | 30.0% | |
| ACCCAAAAAGACTTTATAGT+TGG | + | chr4.4:88170120-88170139 | MS.gene034046:intron | 30.0% | |
| ACTGACTAATCTCAATTTAC+TGG | + | chr4.4:88172900-88172919 | MS.gene034046:CDS | 30.0% | |
| AGTTCATAATAACCTGCAAA+AGG | - | chr4.4:88173189-88173208 | None:intergenic | 30.0% | |
| ATCCAAATGAGCAAACAATT+GGG | + | chr4.4:88172872-88172891 | MS.gene034046:CDS | 30.0% | |
| ATCCATATATCATCATACAG+TGG | + | chr4.4:88170674-88170693 | MS.gene034046:intron | 30.0% | |
| ATGAAAATAGTGTGTTGCAA+TGG | - | chr4.4:88174194-88174213 | None:intergenic | 30.0% | |
| CAACCTAATAATCACCTAAA+TGG | - | chr4.4:88171724-88171743 | None:intergenic | 30.0% | |
| CATTAGAAATTACTGCACAT+TGG | + | chr4.4:88170427-88170446 | MS.gene034046:intron | 30.0% | |
| CTAAATGGAACCAAAAAATG+AGG | - | chr4.4:88171709-88171728 | None:intergenic | 30.0% | |
| GAATAGGATCTCTACTTTAA+GGG | - | chr4.4:88171951-88171970 | None:intergenic | 30.0% | |
| GAGAAATAAGGGTAGAAAAA+TGG | + | chr4.4:88171870-88171889 | MS.gene034046:intron | 30.0% | |
| GAGAATGTGGTATTAAATGT+GGG | + | chr4.4:88171593-88171612 | MS.gene034046:intron | 30.0% | |
| GGACTTTCATTTGCAAAAAA+AGG | + | chr4.4:88170704-88170723 | MS.gene034046:CDS | 30.0% | |
| GGTCAGATATACTAAATATG+TGG | + | chr4.4:88171663-88171682 | MS.gene034046:intron | 30.0% | |
| GTTCCATTTAGGTGATTATT+AGG | + | chr4.4:88171718-88171737 | MS.gene034046:intron | 30.0% | |
| TAAAATGTGAAACCAATGTC+TGG | + | chr4.4:88170177-88170196 | MS.gene034046:intron | 30.0% | |
| TAATTGACCTTGGTTTATCT+TGG | + | chr4.4:88170045-88170064 | MS.gene034046:intron | 30.0% | |
| TAGACTACGAGTTATAAGTT+GGG | + | chr4.4:88170971-88170990 | MS.gene034046:CDS | 30.0% | |
| TCCATATATCATCATACAGT+GGG | + | chr4.4:88170675-88170694 | MS.gene034046:intron | 30.0% | |
| TGAATAGGATCTCTACTTTA+AGG | - | chr4.4:88171952-88171971 | None:intergenic | 30.0% | |
| TGGAATTTGGATGCAAATAA+AGG | - | chr4.4:88171476-88171495 | None:intergenic | 30.0% | |
| TTGGAAGACAGATTTAAAAG+TGG | - | chr4.4:88174420-88174439 | None:intergenic | 30.0% | |
| ! | ATATCTGACCTTTTCTTGAA+AGG | - | chr4.4:88171653-88171672 | None:intergenic | 30.0% |
| ! | ATGGGTGCAATAAATGTTTT+TGG | - | chr4.4:88169918-88169937 | None:intergenic | 30.0% |
| ! | GACCAACTATAAAGTCTTTT+TGG | - | chr4.4:88170125-88170144 | None:intergenic | 30.0% |
| ! | GGTGTGTACTAAATTACTTT+TGG | + | chr4.4:88170851-88170870 | MS.gene034046:intron | 30.0% |
| ! | GTTAGGTTATCTTTGTGTTT+TGG | + | chr4.4:88172324-88172343 | MS.gene034046:intron | 30.0% |
| ! | TAAAGCTAATCATGAGTTGA+AGG | - | chr4.4:88172595-88172614 | None:intergenic | 30.0% |
| ! | TACAATGCTTTTCTTAAGCA+CGG | - | chr4.4:88173989-88174008 | None:intergenic | 30.0% |
| ! | TATTTAAGACTGTAAACTGG+TGG | - | chr4.4:88171558-88171577 | None:intergenic | 30.0% |
| ! | TCATTCAAATGAGTGCTTTT+TGG | + | chr4.4:88169956-88169975 | MS.gene034046:intron | 30.0% |
| ! | TCTTTTCTTTCTCATTCTAG+GGG | + | chr4.4:88173753-88173772 | MS.gene034046:intron | 30.0% |
| !! | AATTTTGACCAACAAATTCC+TGG | - | chr4.4:88173532-88173551 | None:intergenic | 30.0% |
| !! | GAACTCACGATAGTTATTTT+AGG | + | chr4.4:88172476-88172495 | MS.gene034046:intron | 30.0% |
| !! | GATTACTGTTTTATTGACAG+CGG | + | chr4.4:88172385-88172404 | MS.gene034046:intron | 30.0% |
| !! | GTAAAAGTGTTAATTGACCT+TGG | + | chr4.4:88170035-88170054 | MS.gene034046:intron | 30.0% |
| !! | TTATGATCGACTTGTGTTTA+TGG | + | chr4.4:88174514-88174533 | MS.gene034046:intron | 30.0% |
| !!! | CTCATTTTTTGGTTCCATTT+AGG | + | chr4.4:88171707-88171726 | MS.gene034046:intron | 30.0% |
| !!! | GTTTCATTTTTAGGATAGAC+GGG | + | chr4.4:88171830-88171849 | MS.gene034046:intron | 30.0% |
| AAATAAATTGGAGTGGAGTG+AGG | - | chr4.4:88172756-88172775 | None:intergenic | 35.0% | |
| AACAGTGCCAATTATCTATG+TGG | + | chr4.4:88174587-88174606 | MS.gene034046:CDS | 35.0% | |
| AAGTGTCCCATTACTTATTG+TGG | + | chr4.4:88171034-88171053 | MS.gene034046:intron | 35.0% | |
| AATTTGAATGCCTCTTCTGA+AGG | + | chr4.4:88171361-88171380 | MS.gene034046:intron | 35.0% | |
| ACTGACAAAGATAGCAAAGA+AGG | + | chr4.4:88174651-88174670 | MS.gene034046:CDS | 35.0% | |
| AGATAAGTGATCGAGAAAGT+GGG | - | chr4.4:88173155-88173174 | None:intergenic | 35.0% | |
| AGTCTATGTAATTGTGAACG+AGG | + | chr4.4:88170385-88170404 | MS.gene034046:intron | 35.0% | |
| AGTTTCTCCAAGATAAACCA+AGG | - | chr4.4:88170055-88170074 | None:intergenic | 35.0% | |
| ATAAACACAGTTCAGTACAC+AGG | - | chr4.4:88173115-88173134 | None:intergenic | 35.0% | |
| ATACAATGCATGGAGGATTA+AGG | - | chr4.4:88169985-88170004 | None:intergenic | 35.0% | |
| ATACTTGACATGCTTGTGAA+AGG | + | chr4.4:88174304-88174323 | MS.gene034046:intron | 35.0% | |
| ATTAAGTAGTTTGAGGACGT+TGG | - | chr4.4:88173233-88173252 | None:intergenic | 35.0% | |
| CAAACTTTCTCCATCATCTT+TGG | + | chr4.4:88172302-88172321 | MS.gene034046:intron | 35.0% | |
| CAAGTAAGTTAAATGCTCCA+TGG | - | chr4.4:88173338-88173357 | None:intergenic | 35.0% | |
| CTAGACTACGAGTTATAAGT+TGG | + | chr4.4:88170970-88170989 | MS.gene034046:CDS | 35.0% | |
| CTGAAAAAATTCTCATGGGT+GGG | + | chr4.4:88170145-88170164 | MS.gene034046:intron | 35.0% | |
| CTGACAAAGATAGCAAAGAA+GGG | + | chr4.4:88174652-88174671 | MS.gene034046:CDS | 35.0% | |
| GAAAAACAAACTTCCCACTA+GGG | - | chr4.4:88171789-88171808 | None:intergenic | 35.0% | |
| GACAAAGTCGAAAGTGATTA+AGG | + | chr4.4:88171418-88171437 | MS.gene034046:intron | 35.0% | |
| GAGCAAAAGACCAAGAAAAT+GGG | - | chr4.4:88172352-88172371 | None:intergenic | 35.0% | |
| GATAACCTAACCAAAGATGA+TGG | - | chr4.4:88172315-88172334 | None:intergenic | 35.0% | |
| GATAATCTTAGTGACGTTGA+AGG | + | chr4.4:88174696-88174715 | MS.gene034046:CDS | 35.0% | |
| GATCCAAATGAGCAAACAAT+TGG | + | chr4.4:88172871-88172890 | MS.gene034046:CDS | 35.0% | |
| GATTACTCATCATACCAAAG+TGG | - | chr4.4:88172684-88172703 | None:intergenic | 35.0% | |
| GCTTTCTCTACGAAAATCAA+TGG | - | chr4.4:88173475-88173494 | None:intergenic | 35.0% | |
| GGACACTTACCATATCATTA+GGG | - | chr4.4:88171022-88171041 | None:intergenic | 35.0% | |
| GGAGAATGTGGTATTAAATG+TGG | + | chr4.4:88171592-88171611 | MS.gene034046:intron | 35.0% | |
| GGAGTTTCTGTTTCATTATC+TGG | - | chr4.4:88170515-88170534 | None:intergenic | 35.0% | |
| GGTCCTGAAAAAATTCTCAT+GGG | + | chr4.4:88170141-88170160 | MS.gene034046:intron | 35.0% | |
| GTATGGAAAACCGAAGAAAA+GGG | - | chr4.4:88170349-88170368 | None:intergenic | 35.0% | |
| GTCTATGTAATTGTGAACGA+GGG | + | chr4.4:88170386-88170405 | MS.gene034046:intron | 35.0% | |
| GTGAATGCATGATTGTGAAT+AGG | - | chr4.4:88171967-88171986 | None:intergenic | 35.0% | |
| TAAATCATCTTCATTGCCAC+CGG | - | chr4.4:88171295-88171314 | None:intergenic | 35.0% | |
| TACAATGCATGGAGGATTAA+GGG | - | chr4.4:88169984-88170003 | None:intergenic | 35.0% | |
| TAGGGAAAATTCTTAGGCAA+TGG | - | chr4.4:88170225-88170244 | None:intergenic | 35.0% | |
| TCAAATGGACAGAAAATACC+CGG | - | chr4.4:88169845-88169864 | None:intergenic | 35.0% | |
| TCCAAATGAGCAAACAATTG+GGG | + | chr4.4:88172873-88172892 | MS.gene034046:CDS | 35.0% | |
| TCCCACTGTATGATGATATA+TGG | - | chr4.4:88170679-88170698 | None:intergenic | 35.0% | |
| TGAAAAACAAACTTCCCACT+AGG | - | chr4.4:88171790-88171809 | None:intergenic | 35.0% | |
| TGACAAAGATAGCAAAGAAG+GGG | + | chr4.4:88174653-88174672 | MS.gene034046:CDS | 35.0% | |
| TGCTACAATACAGTATGACA+AGG | + | chr4.4:88174163-88174182 | MS.gene034046:intron | 35.0% | |
| TGGTCCTGAAAAAATTCTCA+TGG | + | chr4.4:88170140-88170159 | MS.gene034046:intron | 35.0% | |
| TGTATGGAAAACCGAAGAAA+AGG | - | chr4.4:88170350-88170369 | None:intergenic | 35.0% | |
| TGTCTAAGAAACTTGAGAGT+TGG | - | chr4.4:88174439-88174458 | None:intergenic | 35.0% | |
| TTAAGTTTAGGAACTGTGAG+TGG | + | chr4.4:88171216-88171235 | MS.gene034046:intron | 35.0% | |
| TTCTTAGACATCCTTTACAC+CGG | + | chr4.4:88174449-88174468 | MS.gene034046:CDS | 35.0% | |
| TTCTTTCTGCTGTCTACAAA+TGG | + | chr4.4:88174479-88174498 | MS.gene034046:intron | 35.0% | |
| TTTAGCAGCAACCAAACAAA+TGG | + | chr4.4:88173621-88173640 | MS.gene034046:intron | 35.0% | |
| TTTCTCCATCATCTTTGGTT+AGG | + | chr4.4:88172307-88172326 | MS.gene034046:intron | 35.0% | |
| ! | AGTTTTCCATCTTGCTTGTA+AGG | + | chr4.4:88173409-88173428 | MS.gene034046:intron | 35.0% |
| ! | CATGGAGCATTTAACTTACT+TGG | + | chr4.4:88173336-88173355 | MS.gene034046:intron | 35.0% |
| ! | GGGTAATTGGTAGTTATCTT+AGG | + | chr4.4:88174120-88174139 | MS.gene034046:intron | 35.0% |
| ! | GTAAACATCTTCAAGTTTGG+AGG | + | chr4.4:88171186-88171205 | MS.gene034046:CDS | 35.0% |
| ! | GTTTTCCATCTTGCTTGTAA+GGG | + | chr4.4:88173410-88173429 | MS.gene034046:intron | 35.0% |
| ! | TTACTTATTAGCTCTCGGAA+CGG | + | chr4.4:88169749-88169768 | MS.gene034046:CDS | 35.0% |
| ! | TTCGACTTTGTCTGTTTTCA+GGG | - | chr4.4:88171410-88171429 | None:intergenic | 35.0% |
| ! | TTTATGCCAACCCTTTTCTT+CGG | + | chr4.4:88170336-88170355 | MS.gene034046:intron | 35.0% |
| ! | TTTCGACTTTGTCTGTTTTC+AGG | - | chr4.4:88171411-88171430 | None:intergenic | 35.0% |
| ! | TTTGTGTTGTTGGACATGAT+GGG | + | chr4.4:88170735-88170754 | MS.gene034046:CDS | 35.0% |
| !! | GGTCAAAATTTTGGTCCTTT+AGG | + | chr4.4:88173542-88173561 | MS.gene034046:intron | 35.0% |
| !! | TGTTTTGGATCCCATTTTCT+TGG | + | chr4.4:88172339-88172358 | MS.gene034046:intron | 35.0% |
| !!! | TTCTTACACCCCTCATTTTT+TGG | + | chr4.4:88171696-88171715 | MS.gene034046:intron | 35.0% |
| AAAAAGTCCCATCTCTTCAC+TGG | + | chr4.4:88170817-88170836 | MS.gene034046:CDS | 40.0% | |
| AAGTTGGGAAACTGGTAAAG+AGG | + | chr4.4:88170986-88171005 | MS.gene034046:CDS | 40.0% | |
| ACAGAAAATACCCGGGAAAT+CGG | - | chr4.4:88169837-88169856 | None:intergenic | 40.0% | |
| ACATCTACACTATCTGCACT+TGG | - | chr4.4:88173006-88173025 | None:intergenic | 40.0% | |
| ACTGAAAGCAGCAGTAGAAA+AGG | + | chr4.4:88172165-88172184 | MS.gene034046:intron | 40.0% | |
| AGAAGTAGACATTTCAGCCA+TGG | - | chr4.4:88173801-88173820 | None:intergenic | 40.0% | |
| ATCCAAATTCCATTCCATGG+GGG | + | chr4.4:88171484-88171503 | MS.gene034046:intron | 40.0% | |
| CAAATGGACAGAAAATACCC+GGG | - | chr4.4:88169844-88169863 | None:intergenic | 40.0% | |
| CAGATAAGTGATCGAGAAAG+TGG | - | chr4.4:88173156-88173175 | None:intergenic | 40.0% | |
| CATCCAAATTCCATTCCATG+GGG | + | chr4.4:88171483-88171502 | MS.gene034046:intron | 40.0% | |
| CATGACAGCCTTTCAAGAAA+AGG | + | chr4.4:88171642-88171661 | MS.gene034046:intron | 40.0% | |
| CCTGAAAAAATTCTCATGGG+TGG | + | chr4.4:88170144-88170163 | MS.gene034046:intron | 40.0% | |
| GATCAATGTGAGGTTGTTGA+TGG | + | chr4.4:88172835-88172854 | MS.gene034046:intron | 40.0% | |
| GCATCCAAATTCCATTCCAT+GGG | + | chr4.4:88171482-88171501 | MS.gene034046:intron | 40.0% | |
| GCCAATTATCTATGTGGACA+CGG | + | chr4.4:88174593-88174612 | MS.gene034046:CDS | 40.0% | |
| GCTCATTTGGATCATCATCA+AGG | - | chr4.4:88172864-88172883 | None:intergenic | 40.0% | |
| GCTTTCATTTCATAGGGGTA+GGG | - | chr4.4:88170243-88170262 | None:intergenic | 40.0% | |
| GGAGAAACTTGAGCATTCTT+TGG | + | chr4.4:88170066-88170085 | MS.gene034046:intron | 40.0% | |
| GGAGCAAAAGACCAAGAAAA+TGG | - | chr4.4:88172353-88172372 | None:intergenic | 40.0% | |
| GGCAAGAATTACTAGTTGGT+TGG | - | chr4.4:88174355-88174374 | None:intergenic | 40.0% | |
| GGGACACTTACCATATCATT+AGG | - | chr4.4:88171023-88171042 | None:intergenic | 40.0% | |
| GTACAAGCAATCCAGAAGAA+GGG | - | chr4.4:88173064-88173083 | None:intergenic | 40.0% | |
| GTGCTTGGTTTCTGTTGAAT+AGG | + | chr4.4:88174536-88174555 | MS.gene034046:intron | 40.0% | |
| GTTAACAGCCAGGAATTTGT+TGG | + | chr4.4:88173521-88173540 | MS.gene034046:intron | 40.0% | |
| GTTCCGAGAGCTAATAAGTA+AGG | - | chr4.4:88169750-88169769 | None:intergenic | 40.0% | |
| TAGGGGTAGGGAAAATTCTT+AGG | - | chr4.4:88170231-88170250 | None:intergenic | 40.0% | |
| TAGTGATTTAGGGGAGAATG+TGG | + | chr4.4:88171580-88171599 | MS.gene034046:intron | 40.0% | |
| TATGCAACAAAGCCAGTGTA+TGG | - | chr4.4:88170366-88170385 | None:intergenic | 40.0% | |
| TCATCATACAGTGGGATTTG+CGG | + | chr4.4:88170683-88170702 | MS.gene034046:intron | 40.0% | |
| TCCCCAATTGTTTGCTCATT+TGG | - | chr4.4:88172877-88172896 | None:intergenic | 40.0% | |
| TCCGTGTCCACATAGATAAT+TGG | - | chr4.4:88174597-88174616 | None:intergenic | 40.0% | |
| TCTTAGACATCCTTTACACC+GGG | + | chr4.4:88174450-88174469 | MS.gene034046:CDS | 40.0% | |
| TGAAACAGGAGAGCTTCTAA+AGG | + | chr4.4:88170779-88170798 | MS.gene034046:CDS | 40.0% | |
| TGAAGGTAGTGATGGTATGA+TGG | + | chr4.4:88174713-88174732 | MS.gene034046:CDS | 40.0% | |
| TGCATCCAAATTCCATTCCA+TGG | + | chr4.4:88171481-88171500 | MS.gene034046:intron | 40.0% | |
| TGCTTTCATTTCATAGGGGT+AGG | - | chr4.4:88170244-88170263 | None:intergenic | 40.0% | |
| TGTACAAGCAATCCAGAAGA+AGG | - | chr4.4:88173065-88173084 | None:intergenic | 40.0% | |
| TTCAAATGTGCGTACCACTT+TGG | + | chr4.4:88172667-88172686 | MS.gene034046:intron | 40.0% | |
| TTCAAGTGAGTTCTGCATGA+TGG | + | chr4.4:88173880-88173899 | MS.gene034046:intron | 40.0% | |
| ! | AAATACTTTTCCTGCCCTAG+TGG | + | chr4.4:88171772-88171791 | MS.gene034046:intron | 40.0% |
| ! | AACTTGCTCTTTGTCACTCT+TGG | - | chr4.4:88172971-88172990 | None:intergenic | 40.0% |
| ! | AATACTTTTCCTGCCCTAGT+GGG | + | chr4.4:88171773-88171792 | MS.gene034046:intron | 40.0% |
| ! | ACAACTGACAAGGTGGATTT+GGG | + | chr4.4:88172241-88172260 | MS.gene034046:CDS | 40.0% |
| ! | CGAGTTATAAGTTGGGAAAC+TGG | + | chr4.4:88170978-88170997 | MS.gene034046:CDS | 40.0% |
| ! | CTTTGTGTTGTTGGACATGA+TGG | + | chr4.4:88170734-88170753 | MS.gene034046:CDS | 40.0% |
| ! | GGACCTTACTTATTAGCTCT+CGG | + | chr4.4:88169744-88169763 | MS.gene034046:CDS | 40.0% |
| ! | TCTGAAGTGCCCTAATGATA+TGG | + | chr4.4:88171010-88171029 | MS.gene034046:CDS | 40.0% |
| ! | TGATAGTGAAAGAGAATCCG+AGG | + | chr4.4:88174617-88174636 | MS.gene034046:CDS | 40.0% |
| ! | TTCTTCGGTTTTCCATACAC+TGG | + | chr4.4:88170351-88170370 | MS.gene034046:intron | 40.0% |
| !! | TCATTCTAGGGGTGCAATTT+TGG | + | chr4.4:88173764-88173783 | MS.gene034046:intron | 40.0% |
| !! | TCTTATTTCTGTCTGTCGCT+TGG | + | chr4.4:88172141-88172160 | MS.gene034046:intron | 40.0% |
| !!! | CCACCCATGAGAATTTTTTC+AGG | - | chr4.4:88170147-88170166 | None:intergenic | 40.0% |
| AAGGCTGTCATGCTTCTGAA+TGG | - | chr4.4:88171634-88171653 | None:intergenic | 45.0% | |
| AGTAGTTTGAGGACGTTGGA+TGG | - | chr4.4:88173229-88173248 | None:intergenic | 45.0% | |
| AGTGACGTTGAAGGTAGTGA+TGG | + | chr4.4:88174705-88174724 | MS.gene034046:CDS | 45.0% | |
| AGTTTAGGAACTGTGAGTGG+TGG | + | chr4.4:88171219-88171238 | MS.gene034046:intron | 45.0% | |
| ATCCAAGAATGACACAGAGC+TGG | + | chr4.4:88172933-88172952 | MS.gene034046:CDS | 45.0% | |
| CAAATCCACCTTGTCAGTTG+TGG | - | chr4.4:88172242-88172261 | None:intergenic | 45.0% | |
| CAAATTCCTGGCTGTTAACC+AGG | - | chr4.4:88173520-88173539 | None:intergenic | 45.0% | |
| CGACTTGTGTTTATGGTGCT+TGG | + | chr4.4:88174521-88174540 | MS.gene034046:intron | 45.0% | |
| CTACTAGTCATCCGATTTCC+CGG | + | chr4.4:88169823-88169842 | MS.gene034046:intron | 45.0% | |
| CTACTTCTACAGCATGCAAG+TGG | + | chr4.4:88173813-88173832 | MS.gene034046:CDS | 45.0% | |
| CTGCATGAATACCCAGACAT+TGG | - | chr4.4:88170192-88170211 | None:intergenic | 45.0% | |
| CTTAGACATCCTTTACACCG+GGG | + | chr4.4:88174451-88174470 | MS.gene034046:CDS | 45.0% | |
| CTTGTACACGCAAGATGAGA+AGG | + | chr4.4:88173077-88173096 | MS.gene034046:CDS | 45.0% | |
| GAGAAAGCCAGTGAAGAGAT+GGG | - | chr4.4:88170827-88170846 | None:intergenic | 45.0% | |
| GAGTGGCAATCAAGAACCAA+TGG | - | chr4.4:88171273-88171292 | None:intergenic | 45.0% | |
| GCAAAGAGATGATACTCTCC+TGG | + | chr4.4:88173499-88173518 | MS.gene034046:intron | 45.0% | |
| GCTATCTTTGTCAGTGTCCA+TGG | - | chr4.4:88174646-88174665 | None:intergenic | 45.0% | |
| GGAAAACCGAAGAAAAGGGT+TGG | - | chr4.4:88170345-88170364 | None:intergenic | 45.0% | |
| GGACAGCTTCTTTGTGTTGT+TGG | + | chr4.4:88170725-88170744 | MS.gene034046:CDS | 45.0% | |
| GTAGTTTGAGGACGTTGGAT+GGG | - | chr4.4:88173228-88173247 | None:intergenic | 45.0% | |
| GTGTACTTGACCTTCAGAAG+AGG | - | chr4.4:88171374-88171393 | None:intergenic | 45.0% | |
| TACTAGTCATCCGATTTCCC+GGG | + | chr4.4:88169824-88169843 | MS.gene034046:intron | 45.0% | |
| TCAGTTGTGGTTGGAAGATC+AGG | - | chr4.4:88172229-88172248 | None:intergenic | 45.0% | |
| TCCATCTTGCTTGTAAGGGA+GGG | + | chr4.4:88173414-88173433 | MS.gene034046:intron | 45.0% | |
| TCTACACTATCTGCACTTGG+AGG | - | chr4.4:88173003-88173022 | None:intergenic | 45.0% | |
| TCTTCCAACCACAACTGACA+AGG | + | chr4.4:88172231-88172250 | MS.gene034046:CDS | 45.0% | |
| TGAGAAAGCCAGTGAAGAGA+TGG | - | chr4.4:88170828-88170847 | None:intergenic | 45.0% | |
| TGCAAGTGGAATAATGTCCC+AGG | + | chr4.4:88173827-88173846 | MS.gene034046:CDS | 45.0% | |
| TGGACGTCACTTGTGAAAAC+TGG | - | chr4.4:88170581-88170600 | None:intergenic | 45.0% | |
| TGGCAGATGTCTTACATGAG+TGG | + | chr4.4:88173356-88173375 | MS.gene034046:intron | 45.0% | |
| TGTTGAATAGGTGCTTGACG+AGG | + | chr4.4:88174548-88174567 | MS.gene034046:intron | 45.0% | |
| TTCCATCTTGCTTGTAAGGG+AGG | + | chr4.4:88173413-88173432 | MS.gene034046:intron | 45.0% | |
| TTCCCCCATGGAATGGAATT+TGG | - | chr4.4:88171489-88171508 | None:intergenic | 45.0% | |
| TTGATGTTTCCACTGGTGAG+AGG | + | chr4.4:88169793-88169812 | MS.gene034046:CDS | 45.0% | |
| ! | ATCCAGCTCTGTGTCATTCT+TGG | - | chr4.4:88172938-88172957 | None:intergenic | 45.0% |
| ! | CACAACTGACAAGGTGGATT+TGG | + | chr4.4:88172240-88172259 | MS.gene034046:CDS | 45.0% |
| ! | CATCTTCAAGTTTGGAGGTG+TGG | + | chr4.4:88171191-88171210 | MS.gene034046:CDS | 45.0% |
| ! | GGAGGTGTGGACTTAAGTTT+AGG | + | chr4.4:88171204-88171223 | MS.gene034046:CDS | 45.0% |
| ! | TGTGATGCAACTCCTTTTGC+AGG | + | chr4.4:88173174-88173193 | MS.gene034046:intron | 45.0% |
| ! | TGTTGTTGGACATGATGGGA+AGG | + | chr4.4:88170739-88170758 | MS.gene034046:CDS | 45.0% |
| ! | TTGGTTCTTGATTGCCACTC+CGG | + | chr4.4:88171273-88171292 | MS.gene034046:intron | 45.0% |
| ! | TTTTGGCATGTGCTCTTCCA+TGG | + | chr4.4:88173781-88173800 | MS.gene034046:CDS | 45.0% |
| !! | GGCAAAGCTGTGTTGACTTA+TGG | + | chr4.4:88171519-88171538 | MS.gene034046:intron | 45.0% |
| !! | TCTTCACTGGCTTTCTCACA+TGG | + | chr4.4:88170830-88170849 | MS.gene034046:CDS | 45.0% |
| AACAAACTTCCCACTAGGGC+AGG | - | chr4.4:88171785-88171804 | None:intergenic | 50.0% | |
| AAGAGAATCCGAGGATGCCA+TGG | + | chr4.4:88174626-88174645 | MS.gene034046:CDS | 50.0% | |
| AGAAGCTTACCCCGGTGTAA+AGG | - | chr4.4:88174463-88174482 | None:intergenic | 50.0% | |
| AGCAATCCAGAAGAAGGGTG+CGG | - | chr4.4:88173059-88173078 | None:intergenic | 50.0% | |
| ATTCCATTCCATGGGGGAAG+CGG | + | chr4.4:88171490-88171509 | MS.gene034046:intron | 50.0% | |
| CAGCAGAAAGAAGCTTACCC+CGG | - | chr4.4:88174471-88174490 | None:intergenic | 50.0% | |
| CATCTTGCTTGTAAGGGAGG+GGG | + | chr4.4:88173416-88173435 | MS.gene034046:intron | 50.0% | |
| CCATCTTGCTTGTAAGGGAG+GGG | + | chr4.4:88173415-88173434 | MS.gene034046:intron | 50.0% | |
| CGGGAAATCGGATGACTAGT+AGG | - | chr4.4:88169825-88169844 | None:intergenic | 50.0% | |
| CTCGCTGTTGATGTTTCCAC+TGG | + | chr4.4:88169786-88169805 | MS.gene034046:CDS | 50.0% | |
| GGTCCAAACACTACCCTTGA+GGG | + | chr4.4:88171240-88171259 | MS.gene034046:intron | 50.0% | |
| GTCTCAGCAGTTACGTCTTC+AGG | + | chr4.4:88171318-88171337 | MS.gene034046:intron | 50.0% | |
| TACTCTCCTGGTTAACAGCC+AGG | + | chr4.4:88173511-88173530 | MS.gene034046:intron | 50.0% | |
| TATGCCAGACAGTGTTCCCA+TGG | + | chr4.4:88173318-88173337 | MS.gene034046:intron | 50.0% | |
| TCAGCAGTTACGTCTTCAGG+TGG | + | chr4.4:88171321-88171340 | MS.gene034046:intron | 50.0% | |
| TCCAACCACAACTGACAAGG+TGG | + | chr4.4:88172234-88172253 | MS.gene034046:CDS | 50.0% | |
| TCCACCTTGTCAGTTGTGGT+TGG | - | chr4.4:88172238-88172257 | None:intergenic | 50.0% | |
| TGAATAGGTGCTTGACGAGG+AGG | + | chr4.4:88174551-88174570 | MS.gene034046:intron | 50.0% | |
| TGGTCCAAACACTACCCTTG+AGG | + | chr4.4:88171239-88171258 | MS.gene034046:intron | 50.0% | |
| TTGCCCTCAAGGGTAGTGTT+TGG | - | chr4.4:88171246-88171265 | None:intergenic | 50.0% | |
| TTTCCACTGGTGAGAGGAAG+TGG | + | chr4.4:88169799-88169818 | MS.gene034046:CDS | 50.0% | |
| ! | TTAGCTCTCGGAACGGAAGA+TGG | + | chr4.4:88169756-88169775 | MS.gene034046:CDS | 50.0% |
| !! | CAATGGAGCATTGCCCTCAA+GGG | - | chr4.4:88171256-88171275 | None:intergenic | 50.0% |
| AGATGACCGCACCCTTCTTC+TGG | + | chr4.4:88173050-88173069 | MS.gene034046:CDS | 55.0% | |
| CATCTTCATTGCCACCGGAG+TGG | - | chr4.4:88171290-88171309 | None:intergenic | 55.0% | |
| CCCCTCCCTTACAAGCAAGA+TGG | - | chr4.4:88173418-88173437 | None:intergenic | 55.0% | |
| CCTTGAGGGCAATGCTCCAT+TGG | + | chr4.4:88171254-88171273 | MS.gene034046:intron | 55.0% | |
| CTTGTAAGGGAGGGGGAAAG+AGG | + | chr4.4:88173423-88173442 | MS.gene034046:intron | 55.0% | |
| GAGTGGAGTGAGGAAGTCGA+GGG | - | chr4.4:88172746-88172765 | None:intergenic | 55.0% | |
| GTCAGTGTCCATGGCATCCT+CGG | - | chr4.4:88174637-88174656 | None:intergenic | 55.0% | |
| GTTCTTGATTGCCACTCCGG+TGG | + | chr4.4:88171276-88171295 | MS.gene034046:intron | 55.0% | |
| TGCTCCATGGGAACACTGTC+TGG | - | chr4.4:88173325-88173344 | None:intergenic | 55.0% | |
| !! | CCAATGGAGCATTGCCCTCA+AGG | - | chr4.4:88171257-88171276 | None:intergenic | 55.0% |
| AGGCCACTTCCTCTCACCAG+TGG | - | chr4.4:88169805-88169824 | None:intergenic | 60.0% | |
| GGAGTGGAGTGAGGAAGTCG+AGG | - | chr4.4:88172747-88172766 | None:intergenic | 60.0% | |
| TGTCCGCTTCCCCCATGGAA+TGG | - | chr4.4:88171496-88171515 | None:intergenic | 60.0% | |
| CCATCTGTCCGCTTCCCCCA+TGG | - | chr4.4:88171501-88171520 | None:intergenic | 65.0% | |
| CCATGGGGGAAGCGGACAGA+TGG | + | chr4.4:88171498-88171517 | MS.gene034046:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 88169729 | 88174743 | 88169729 | ID=MS.gene034046 |
| chr4.4 | mRNA | 88169729 | 88174743 | 88169729 | ID=MS.gene034046.t1;Parent=MS.gene034046 |
| chr4.4 | exon | 88169729 | 88169828 | 88169729 | ID=MS.gene034046.t1.exon1;Parent=MS.gene034046.t1 |
| chr4.4 | CDS | 88169729 | 88169828 | 88169729 | ID=cds.MS.gene034046.t1;Parent=MS.gene034046.t1 |
| chr4.4 | exon | 88170694 | 88170855 | 88170694 | ID=MS.gene034046.t1.exon2;Parent=MS.gene034046.t1 |
| chr4.4 | CDS | 88170694 | 88170855 | 88170694 | ID=cds.MS.gene034046.t1;Parent=MS.gene034046.t1 |
| chr4.4 | exon | 88170943 | 88171031 | 88170943 | ID=MS.gene034046.t1.exon3;Parent=MS.gene034046.t1 |
| chr4.4 | CDS | 88170943 | 88171031 | 88170943 | ID=cds.MS.gene034046.t1;Parent=MS.gene034046.t1 |
| chr4.4 | exon | 88171119 | 88171230 | 88171119 | ID=MS.gene034046.t1.exon4;Parent=MS.gene034046.t1 |
| chr4.4 | CDS | 88171119 | 88171230 | 88171119 | ID=cds.MS.gene034046.t1;Parent=MS.gene034046.t1 |
| chr4.4 | exon | 88172176 | 88172262 | 88172176 | ID=MS.gene034046.t1.exon5;Parent=MS.gene034046.t1 |
| chr4.4 | CDS | 88172176 | 88172262 | 88172176 | ID=cds.MS.gene034046.t1;Parent=MS.gene034046.t1 |
| chr4.4 | exon | 88172836 | 88173098 | 88172836 | ID=MS.gene034046.t1.exon6;Parent=MS.gene034046.t1 |
| chr4.4 | CDS | 88172836 | 88173098 | 88172836 | ID=cds.MS.gene034046.t1;Parent=MS.gene034046.t1 |
| chr4.4 | exon | 88173196 | 88173278 | 88173196 | ID=MS.gene034046.t1.exon7;Parent=MS.gene034046.t1 |
| chr4.4 | CDS | 88173196 | 88173278 | 88173196 | ID=cds.MS.gene034046.t1;Parent=MS.gene034046.t1 |
| chr4.4 | exon | 88173773 | 88173884 | 88173773 | ID=MS.gene034046.t1.exon8;Parent=MS.gene034046.t1 |
| chr4.4 | CDS | 88173773 | 88173884 | 88173773 | ID=cds.MS.gene034046.t1;Parent=MS.gene034046.t1 |
| chr4.4 | exon | 88174398 | 88174472 | 88174398 | ID=MS.gene034046.t1.exon9;Parent=MS.gene034046.t1 |
| chr4.4 | CDS | 88174398 | 88174472 | 88174398 | ID=cds.MS.gene034046.t1;Parent=MS.gene034046.t1 |
| chr4.4 | exon | 88174558 | 88174743 | 88174558 | ID=MS.gene034046.t1.exon10;Parent=MS.gene034046.t1 |
| chr4.4 | CDS | 88174558 | 88174743 | 88174558 | ID=cds.MS.gene034046.t1;Parent=MS.gene034046.t1 |
| Gene Sequence |
| Protein sequence |
