Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37310.t1 | XP_013454685.1 | 93 | 570 | 29 | 1 | 1 | 570 | 1 | 559 | 2.80E-285 | 990.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37310.t1 | A0A072UH09 | 93.0 | 570 | 29 | 1 | 1 | 570 | 1 | 559 | 2.0e-285 | 990.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050427 | MS.gene37310 | 0.827979 | 1.16E-54 | -1.69E-46 |
| MS.gene053492 | MS.gene37310 | 0.834917 | 2.27E-56 | -1.69E-46 |
| MS.gene059935 | MS.gene37310 | 0.805855 | 1.09E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37310.t1 | MTR_4g011300 | 95.088 | 570 | 17 | 1 | 1 | 570 | 1 | 559 | 0.0 | 1095 |
| MS.gene37310.t1 | MTR_4g120740 | 25.500 | 600 | 367 | 13 | 10 | 567 | 10 | 571 | 2.63e-42 | 161 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37310.t1 | AT1G15420 | 55.670 | 194 | 74 | 4 | 376 | 567 | 35 | 218 | 3.17e-58 | 196 |
| MS.gene37310.t1 | AT1G15420 | 55.491 | 173 | 65 | 4 | 376 | 546 | 35 | 197 | 3.73e-50 | 172 |
| MS.gene37310.t1 | AT5G11240 | 26.678 | 596 | 350 | 14 | 10 | 567 | 9 | 555 | 1.23e-45 | 170 |
Find 126 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTTAAATATTAGTGATTT+AGG | 0.140856 | 4.4:+88103698 | MS.gene37310:CDS |
| ATCCAGCTCTGTGTCATTCT+TGG | 0.154928 | 4.4:-88105052 | None:intergenic |
| TCCCCAATTGTTTGCTCATT+TGG | 0.165741 | 4.4:-88104991 | None:intergenic |
| TCATTCTAGGGGTGCAATTT+TGG | 0.170768 | 4.4:+88105880 | MS.gene37310:intron |
| TTAGTATATCTGACCTTTCT+TGG | 0.181897 | 4.4:-88103783 | None:intergenic |
| CACAACTGACAAGGTGGATT+TGG | 0.246483 | 4.4:+88104357 | MS.gene37310:CDS |
| AAAGTAAACATCTTCAAGTT+TGG | 0.292180 | 4.4:+88103321 | MS.gene37310:CDS |
| TCTTAAATATTAGTGATTTA+GGG | 0.295585 | 4.4:+88103699 | MS.gene37310:CDS |
| ATGGAATTTGGATGCAATAA+AGG | 0.313012 | 4.4:-88103606 | None:intergenic |
| ATGACACTTACCATATCATT+AGG | 0.325045 | 4.4:-88103163 | None:intergenic |
| GTCTCAGCAGTTACGTCTTC+AGG | 0.326049 | 4.4:+88103452 | MS.gene37310:CDS |
| ACTGACTAATCTCAATTTAC+TGG | 0.335974 | 4.4:+88105017 | MS.gene37310:CDS |
| AACTTGCTCTTTGTCACTCT+TGG | 0.336193 | 4.4:-88105085 | None:intergenic |
| TGGAGGTGTGACTTAAGTTT+AGG | 0.341028 | 4.4:+88103341 | MS.gene37310:CDS |
| CTTACGGCTTTCACACCTAA+TGG | 0.350828 | 4.4:+88100856 | MS.gene37310:CDS |
| GATGGTGAAGGGTAAGTTAA+AGG | 0.352630 | 4.4:+88100825 | None:intergenic |
| GATCCAAATGAGCAAACAAT+TGG | 0.355713 | 4.4:+88104988 | MS.gene37310:CDS |
| TGTATTGCATGCAGTTTCAC+TGG | 0.359064 | 4.4:+88101644 | MS.gene37310:CDS |
| ATGCAGTTTCACTGGGATAA+AGG | 0.361884 | 4.4:+88101652 | MS.gene37310:CDS |
| TCAGTTGTGGTTGGAAGATC+AGG | 0.364295 | 4.4:-88104343 | None:intergenic |
| TATGAGTTTAATTCTGAAAC+AGG | 0.368224 | 4.4:+88102908 | MS.gene37310:CDS |
| GGACAGCTTCTTTGTGTTGT+TGG | 0.373076 | 4.4:+88102869 | MS.gene37310:CDS |
| AGATGACCGCACCCTTCTTC+TGG | 0.376441 | 4.4:+88105167 | MS.gene37310:CDS |
| CGAGTTATAAGTTGGGAAAC+TGG | 0.378633 | 4.4:+88103121 | MS.gene37310:CDS |
| CTTTGTGTTGTTGGACATGA+TGG | 0.379769 | 4.4:+88102878 | MS.gene37310:CDS |
| TAAGAGAATTAAGTAGTTTG+AGG | 0.391173 | 4.4:-88105354 | None:intergenic |
| TTATATCCATTATTGAATCT+AGG | 0.394282 | 4.4:+88105374 | MS.gene37310:CDS |
| CCTACTAGTCATCCGATTCC+CGG | 0.395768 | 4.4:+88101996 | MS.gene37310:CDS |
| ACCCTTGAGGCATGCTCCAT+TGG | 0.397420 | 4.4:+88103388 | MS.gene37310:CDS |
| TCTGAAGTGCCCTAATGATA+TGG | 0.401133 | 4.4:+88103153 | MS.gene37310:CDS |
| GCAGCTATTCTGTCTGCAAA+TGG | 0.415659 | 4.4:+88100886 | MS.gene37310:CDS |
| ATCCAAATGAGCAAACAATT+GGG | 0.422843 | 4.4:+88104989 | MS.gene37310:CDS |
| ACAACTGACAAGGTGGATTT+GGG | 0.423409 | 4.4:+88104358 | MS.gene37310:CDS |
| TGCATCCAAATTCCATTCCA+TGG | 0.428872 | 4.4:+88103613 | MS.gene37310:CDS |
| GTATTACCTAGATTCAATAA+TGG | 0.432211 | 4.4:-88105380 | None:intergenic |
| TTGGAAGACAGATTTAAAAG+TGG | 0.432645 | 4.4:-88106533 | None:intergenic |
| CTCGCTGTTGATGTTTCCAC+TGG | 0.439393 | 4.4:+88101960 | MS.gene37310:CDS |
| ATGCAAGCTGTGTTGACTTA+TGG | 0.439684 | 4.4:+88103650 | MS.gene37310:CDS |
| TTAGCTCTCGGAACGGAAGA+TGG | 0.440496 | 4.4:+88101930 | MS.gene37310:CDS |
| CTAGACTACGAGTTATAAGT+TGG | 0.457270 | 4.4:+88103113 | MS.gene37310:CDS |
| TCTTCACTGGCTTTCTCACA+TGG | 0.458648 | 4.4:+88102971 | MS.gene37310:CDS |
| GGAGAATGTGGTATTAAATG+TGG | 0.458764 | 4.4:+88103721 | MS.gene37310:CDS |
| ATAGCTGCATAGTCACCATT+AGG | 0.460078 | 4.4:-88100871 | None:intergenic |
| TTTCCACTGGTGAGAGGAAG+TGG | 0.461504 | 4.4:+88101973 | MS.gene37310:CDS |
| GGTGTGAAAGCCGTAAGAAC+AGG | 0.461677 | 4.4:-88100850 | None:intergenic |
| GTTAAAGGAACCTGTTCTTA+CGG | 0.464735 | 4.4:+88100840 | MS.gene37310:CDS |
| TGACAGAAATACCCGGGAAT+CGG | 0.480215 | 4.4:-88102008 | None:intergenic |
| TGTCTAAGAAACTTGAGAGT+TGG | 0.481539 | 4.4:-88106552 | None:intergenic |
| CTTCAGGTGGAACTTACATA+TGG | 0.486164 | 4.4:+88103468 | MS.gene37310:CDS |
| TGACACTTACCATATCATTA+GGG | 0.487717 | 4.4:-88103162 | None:intergenic |
| TTGGTTCTTGATTGCCACTC+CGG | 0.488851 | 4.4:+88103407 | MS.gene37310:CDS |
| GCTCATTTGGATCATCATCA+AGG | 0.491997 | 4.4:-88104978 | None:intergenic |
| ATTAAGTAGTTTGAGGACGT+TGG | 0.492657 | 4.4:-88105347 | None:intergenic |
| ACTGAAAGCAGCAGTAGAAA+AGG | 0.494658 | 4.4:+88104282 | MS.gene37310:intron |
| GTAAACATCTTCAAGTTTGG+AGG | 0.497984 | 4.4:+88103324 | MS.gene37310:CDS |
| AGTAGTTTGAGGACGTTGGA+TGG | 0.498447 | 4.4:-88105343 | None:intergenic |
| GATCAATGTGAGGTTGTTGA+TGG | 0.503198 | 4.4:+88104952 | MS.gene37310:intron |
| GCATCCAAATTCCATTCCAT+GGG | 0.503938 | 4.4:+88103614 | MS.gene37310:CDS |
| CATGACAGCCTTTCCAAGAA+AGG | 0.505596 | 4.4:+88103770 | MS.gene37310:CDS |
| ATAGCGAAAGTTCAAAGAAA+AGG | 0.506147 | 4.4:+88103576 | MS.gene37310:CDS |
| AGACAAAGTCGAAAGTGATA+AGG | 0.506707 | 4.4:+88103550 | MS.gene37310:CDS |
| CAGCTATTCTGTCTGCAAAT+GGG | 0.511683 | 4.4:+88100887 | MS.gene37310:CDS |
| AGAAGCTTACCCCGGTGTAA+AGG | 0.512950 | 4.4:-88106576 | None:intergenic |
| TGAGAAAGCCAGTGAAGAGA+TGG | 0.517464 | 4.4:-88102966 | None:intergenic |
| TGTACAAGCAATCCAGAAGA+AGG | 0.518949 | 4.4:-88105179 | None:intergenic |
| AAGGCTGTCATGCTTCTGAA+TGG | 0.520204 | 4.4:-88103759 | None:intergenic |
| GTTCCGAGAGCTAATAAGTA+AGG | 0.523266 | 4.4:-88101921 | None:intergenic |
| CAAATCCACCTTGTCAGTTG+TGG | 0.523283 | 4.4:-88104356 | None:intergenic |
| TCCACCTTGTCAGTTGTGGT+TGG | 0.526474 | 4.4:-88104352 | None:intergenic |
| CCGGGAATCGGATGACTAGT+AGG | 0.527690 | 4.4:-88101996 | None:intergenic |
| AAGTTGGGAAACTGGTAAAG+AGG | 0.528152 | 4.4:+88103129 | MS.gene37310:CDS |
| TCATCATACAGTGGGATTTG+CGG | 0.532835 | 4.4:+88102827 | MS.gene37310:intron |
| GGACCTTACTTATTAGCTCT+CGG | 0.532898 | 4.4:+88101918 | MS.gene37310:CDS |
| CTTAAATATTAGTGATTTAG+GGG | 0.534808 | 4.4:+88103700 | MS.gene37310:CDS |
| ATATCTGACCTTTCTTGGAA+AGG | 0.536348 | 4.4:-88103778 | None:intergenic |
| CTACTAGTCATCCGATTCCC+GGG | 0.537747 | 4.4:+88101997 | MS.gene37310:CDS |
| GCATGCCTCAAGGGTAGTGT+TGG | 0.546380 | 4.4:-88103380 | None:intergenic |
| GTAGTTTGAGGACGTTGGAT+GGG | 0.548008 | 4.4:-88105342 | None:intergenic |
| GTATTGCATGCAGTTTCACT+GGG | 0.549542 | 4.4:+88101645 | MS.gene37310:CDS |
| AATTTGAATGCCTCTTCTGA+AGG | 0.551388 | 4.4:+88103494 | MS.gene37310:CDS |
| GCAGAGTGGAAGCCATCAGA+TGG | 0.554222 | 4.4:+88101599 | MS.gene37310:CDS |
| TAGTGATTTAGGGGAGAATG+TGG | 0.555475 | 4.4:+88103709 | MS.gene37310:CDS |
| GAGAATGTGGTATTAAATGT+GGG | 0.555720 | 4.4:+88103722 | MS.gene37310:CDS |
| AAGGTTAACTGAGATGGTGA+AGG | 0.556011 | 4.4:+88100813 | None:intergenic |
| ATCCAAGAATGACACAGAGC+TGG | 0.556575 | 4.4:+88105050 | MS.gene37310:CDS |
| TTCTTAGACATCCTTTACAC+CGG | 0.558696 | 4.4:+88106565 | MS.gene37310:CDS |
| CTTGTACACGCAAGATGAGA+AGG | 0.561271 | 4.4:+88105194 | MS.gene37310:CDS |
| ACCAATGGAGCATGCCTCAA+GGG | 0.561747 | 4.4:-88103389 | None:intergenic |
| TAGACTACGAGTTATAAGTT+GGG | 0.563426 | 4.4:+88103114 | MS.gene37310:CDS |
| GAGTGGCAATCAAGAACCAA+TGG | 0.567220 | 4.4:-88103404 | None:intergenic |
| TGAAACAGGAGAGCTTCTAA+AGG | 0.570461 | 4.4:+88102922 | MS.gene37310:CDS |
| TCTACACTATCTGCACTTGG+AGG | 0.572947 | 4.4:-88105117 | None:intergenic |
| GTTCTTGATTGCCACTCCGG+TGG | 0.575186 | 4.4:+88103410 | MS.gene37310:CDS |
| TTTGTGTTGTTGGACATGAT+GGG | 0.577817 | 4.4:+88102879 | MS.gene37310:CDS |
| TGCAAGTGGAATAATGTCCC+AGG | 0.578119 | 4.4:+88105943 | MS.gene37310:CDS |
| TAAATCATCTTCATTGCCAC+CGG | 0.579220 | 4.4:-88103426 | None:intergenic |
| AACCAATGGAGCATGCCTCA+AGG | 0.585971 | 4.4:-88103390 | None:intergenic |
| AGAAGTAGACATTTCAGCCA+TGG | 0.592596 | 4.4:-88105914 | None:intergenic |
| ACATCTACACTATCTGCACT+TGG | 0.592728 | 4.4:-88105120 | None:intergenic |
| CTACTTCTACAGCATGCAAG+TGG | 0.594965 | 4.4:+88105929 | MS.gene37310:CDS |
| ATATCATGAACTCCATCTGA+TGG | 0.595193 | 4.4:-88101611 | None:intergenic |
| TCTTAGACATCCTTTACACC+GGG | 0.601967 | 4.4:+88106566 | MS.gene37310:CDS |
| CAGATTTGGAATACAAACAG+TGG | 0.605146 | 4.4:+88101566 | MS.gene37310:intron |
| TGTTGTTGGACATGATGGGA+AGG | 0.606171 | 4.4:+88102883 | MS.gene37310:CDS |
| TCTTCCAACCACAACTGACA+AGG | 0.614649 | 4.4:+88104348 | MS.gene37310:CDS |
| AGGTTAACTGAGATGGTGAA+GGG | 0.617825 | 4.4:+88100814 | None:intergenic |
| TCCAAATGAGCAAACAATTG+GGG | 0.618540 | 4.4:+88104990 | MS.gene37310:CDS |
| TTACTTATTAGCTCTCGGAA+CGG | 0.621773 | 4.4:+88101923 | MS.gene37310:CDS |
| GTGTACTTGACCTTCAGAAG+AGG | 0.628171 | 4.4:-88103504 | None:intergenic |
| AGTTTAGGAACTGTGAGTGG+TGG | 0.629851 | 4.4:+88103356 | MS.gene37310:CDS |
| TATTCTGTCTGCAAATGGGA+CGG | 0.630145 | 4.4:+88100891 | MS.gene37310:CDS |
| TTGATGTTTCCACTGGTGAG+AGG | 0.633142 | 4.4:+88101967 | MS.gene37310:CDS |
| GTGGAGATTTGTTAGCAGAG+TGG | 0.645375 | 4.4:+88101585 | MS.gene37310:CDS |
| AGGCCACTTCCTCTCACCAG+TGG | 0.645921 | 4.4:-88101976 | None:intergenic |
| TCCAACCACAACTGACAAGG+TGG | 0.646455 | 4.4:+88104351 | MS.gene37310:CDS |
| AGCAATCCAGAAGAAGGGTG+CGG | 0.646504 | 4.4:-88105173 | None:intergenic |
| GTACAAGCAATCCAGAAGAA+GGG | 0.650839 | 4.4:-88105178 | None:intergenic |
| CATCTTCATTGCCACCGGAG+TGG | 0.651757 | 4.4:-88103421 | None:intergenic |
| TCAGCAGTTACGTCTTCAGG+TGG | 0.656715 | 4.4:+88103455 | MS.gene37310:CDS |
| CATCCAAATTCCATTCCATG+GGG | 0.678818 | 4.4:+88103615 | MS.gene37310:CDS |
| ATATTTAAGACTGTAAACTG+TGG | 0.690852 | 4.4:-88103686 | None:intergenic |
| TTAAGTTTAGGAACTGTGAG+TGG | 0.702462 | 4.4:+88103353 | MS.gene37310:CDS |
| ATTTAATGTAGATCAATGTG+AGG | 0.722303 | 4.4:+88104942 | MS.gene37310:intron |
| ATCCAAATTCCATTCCATGG+GGG | 0.733289 | 4.4:+88103616 | MS.gene37310:CDS |
| GTGGTCCAACACTACCCTTG+AGG | 0.738669 | 4.4:+88103375 | MS.gene37310:CDS |
| CTTAGACATCCTTTACACCG+GGG | 0.742537 | 4.4:+88106567 | MS.gene37310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAACATTCAAAAAATAAAT+TGG | - | chr4.4:88104885-88104904 | None:intergenic | 10.0% |
| !!! | ATTTTTTGAATGTTAATTAT+TGG | + | chr4.4:88104889-88104908 | MS.gene37310:intron | 10.0% |
| !! | AAGAACAACAAATTATATAA+CGG | - | chr4.4:88102794-88102813 | None:intergenic | 15.0% |
| !! | ATAAAACATGAAATTCTATT+TGG | + | chr4.4:88104154-88104173 | MS.gene37310:intron | 15.0% |
| !! | ATGTATAAATAAGAGAAATA+AGG | + | chr4.4:88103975-88103994 | MS.gene37310:intron | 15.0% |
| !! | CTATTAAGAATAAAAGAAAA+AGG | + | chr4.4:88104629-88104648 | MS.gene37310:intron | 15.0% |
| !! | TCTTAAATATTAGTGATTTA+GGG | + | chr4.4:88103699-88103718 | MS.gene37310:CDS | 15.0% |
| !! | TGAAATTAAAAATCTAGAAA+TGG | - | chr4.4:88105499-88105518 | None:intergenic | 15.0% |
| !! | TGTATAAATAAGAGAAATAA+GGG | + | chr4.4:88103976-88103995 | MS.gene37310:intron | 15.0% |
| !! | TTTATTAAATATACAATGCA+TGG | - | chr4.4:88102162-88102181 | None:intergenic | 15.0% |
| !!! | AATCGATACATTTTTAAATA+TGG | - | chr4.4:88102688-88102707 | None:intergenic | 15.0% |
| !!! | AATTTTTGTATACTTCATAT+TGG | + | chr4.4:88102614-88102633 | MS.gene37310:intron | 15.0% |
| !!! | ATAATTATGATACTTGTTAA+AGG | - | chr4.4:88105776-88105795 | None:intergenic | 15.0% |
| !!! | ATCGATACATTTTTAAATAT+GGG | - | chr4.4:88102687-88102706 | None:intergenic | 15.0% |
| !!! | GTTATAAATCTACAATTTTT+GGG | + | chr4.4:88106218-88106237 | MS.gene37310:intron | 15.0% |
| !!! | TAATATTTTAAATTGTTTGC+TGG | + | chr4.4:88104390-88104409 | MS.gene37310:intron | 15.0% |
| !!! | TAATTATGATACTTGTTAAA+GGG | - | chr4.4:88105775-88105794 | None:intergenic | 15.0% |
| !!! | TGTTATAAATCTACAATTTT+TGG | + | chr4.4:88106217-88106236 | MS.gene37310:intron | 15.0% |
| !!! | TGTTTTTTTAATGCTTTAAA+AGG | + | chr4.4:88101828-88101847 | MS.gene37310:intron | 15.0% |
| !! | AAAAGAAAAATTCATTGTGA+AGG | + | chr4.4:88104037-88104056 | MS.gene37310:intron | 20.0% |
| !! | AAAAGAAAGAGAAAATAACT+TGG | - | chr4.4:88105803-88105822 | None:intergenic | 20.0% |
| !! | AAAGAAAAATTCATTGTGAA+GGG | + | chr4.4:88104038-88104057 | MS.gene37310:intron | 20.0% |
| !! | AGATATGAAATGCATATAAT+TGG | - | chr4.4:88106078-88106097 | None:intergenic | 20.0% |
| !! | AGGATTATTAACAGAAAAAA+TGG | + | chr4.4:88105679-88105698 | MS.gene37310:intron | 20.0% |
| !! | ATAATTGTTAACTCTTACTT+TGG | + | chr4.4:88101030-88101049 | MS.gene37310:intron | 20.0% |
| !! | ATGTAACAAGATTAATTGTT+AGG | - | chr4.4:88103031-88103050 | None:intergenic | 20.0% |
| !! | ATTCAAAAAATAAATTGGAG+TGG | - | chr4.4:88104880-88104899 | None:intergenic | 20.0% |
| !! | CTTAAATATTAGTGATTTAG+GGG | + | chr4.4:88103700-88103719 | MS.gene37310:CDS | 20.0% |
| !! | GCAAATATTAAATTTGTCAT+TGG | + | chr4.4:88102263-88102282 | MS.gene37310:intron | 20.0% |
| !! | GCACAATAAATAGATAAAAA+AGG | - | chr4.4:88106492-88106511 | None:intergenic | 20.0% |
| !! | GTCTTAAATATTAGTGATTT+AGG | + | chr4.4:88103698-88103717 | MS.gene37310:CDS | 20.0% |
| !! | GTTAATTATAACCATTTGTT+TGG | - | chr4.4:88105752-88105771 | None:intergenic | 20.0% |
| !! | TAACAATTAATCTTGTTACA+TGG | + | chr4.4:88103030-88103049 | MS.gene37310:intron | 20.0% |
| !! | TGAAACTGGTAATAATATTA+AGG | - | chr4.4:88102712-88102731 | None:intergenic | 20.0% |
| !! | TTATATCCATTATTGAATCT+AGG | + | chr4.4:88105374-88105393 | MS.gene37310:CDS | 20.0% |
| !!! | AATAAGATTTTGTTGGATAT+TGG | + | chr4.4:88101478-88101497 | MS.gene37310:intron | 20.0% |
| !!! | AATAGTTTTACTTTGTTCAA+TGG | - | chr4.4:88102104-88102123 | None:intergenic | 20.0% |
| !!! | AATGTCACAATTTTTTTAGT+TGG | + | chr4.4:88104182-88104201 | MS.gene37310:intron | 20.0% |
| !!! | AATTAAATATTTTGCATCAC+TGG | - | chr4.4:88103288-88103307 | None:intergenic | 20.0% |
| !!! | AATTATGATACTTGTTAAAG+GGG | - | chr4.4:88105774-88105793 | None:intergenic | 20.0% |
| !!! | AATTGGTAATTTAAAAGACA+TGG | - | chr4.4:88106061-88106080 | None:intergenic | 20.0% |
| !!! | ATACATTTTTAAATATGGGA+TGG | - | chr4.4:88102683-88102702 | None:intergenic | 20.0% |
| !!! | ATAGCTAAATATTTTTCATC+TGG | - | chr4.4:88103085-88103104 | None:intergenic | 20.0% |
| !!! | ATATGTTCTTTTCAAAATTC+AGG | - | chr4.4:88104536-88104555 | None:intergenic | 20.0% |
| !!! | ATGTCACAATTTTTTTAGTT+GGG | + | chr4.4:88104183-88104202 | MS.gene37310:intron | 20.0% |
| !!! | ATTGGTAATTTAAAAGACAT+GGG | - | chr4.4:88106060-88106079 | None:intergenic | 20.0% |
| !!! | ATTGGTTCACATTTTATATT+TGG | - | chr4.4:88102334-88102353 | None:intergenic | 20.0% |
| !!! | TACATTTTTAAATATGGGAT+GGG | - | chr4.4:88102682-88102701 | None:intergenic | 20.0% |
| !!! | TGCACTATTATTTTTTTGAA+TGG | + | chr4.4:88104829-88104848 | MS.gene37310:intron | 20.0% |
| !!! | TTAGCTTTAATAAGACAATT+TGG | + | chr4.4:88104723-88104742 | MS.gene37310:intron | 20.0% |
| !!! | TTATTTTCTCTTTCTTTTAC+AGG | + | chr4.4:88105805-88105824 | MS.gene37310:intron | 20.0% |
| !!! | TTGTTGATATGTTCATTTTT+AGG | + | chr4.4:88103938-88103957 | MS.gene37310:intron | 20.0% |
| !!! | TTTTCAAGGTTATTTTAGTT+CGG | - | chr4.4:88103529-88103548 | None:intergenic | 20.0% |
| !!! | TTTTCGTTAAAAGACAAAAT+TGG | - | chr4.4:88101199-88101218 | None:intergenic | 20.0% |
| !!! | TTTTCTGTTAATAATCCTAA+AGG | - | chr4.4:88105677-88105696 | None:intergenic | 20.0% |
| ! | AAACATTGCTTCATTTCATA+GGG | - | chr4.4:88102408-88102427 | None:intergenic | 25.0% |
| ! | AACAAGATTAATTGTTAGGA+TGG | - | chr4.4:88103027-88103046 | None:intergenic | 25.0% |
| ! | AACAGTAATCTCAATTTCAA+TGG | - | chr4.4:88104492-88104511 | None:intergenic | 25.0% |
| ! | AAGAAAAATTCATTGTGAAG+GGG | + | chr4.4:88104039-88104058 | MS.gene37310:intron | 25.0% |
| ! | AAGATAAATCAACATGCAAA+TGG | - | chr4.4:88104766-88104785 | None:intergenic | 25.0% |
| ! | AATTAGCGTAAAAAAGGTAA+GGG | + | chr4.4:88101897-88101916 | MS.gene37310:intron | 25.0% |
| ! | ACAGTAATCTCAATTTCAAT+GGG | - | chr4.4:88104491-88104510 | None:intergenic | 25.0% |
| ! | AGAAATAAGGGTAGAAAAAT+GGG | + | chr4.4:88103988-88104007 | MS.gene37310:intron | 25.0% |
| ! | ATGATATGATGAATATACCT+TGG | - | chr4.4:88101744-88101763 | None:intergenic | 25.0% |
| ! | ATTTAATGTAGATCAATGTG+AGG | + | chr4.4:88104942-88104961 | MS.gene37310:intron | 25.0% |
| ! | CAAAAAAATAATAGTGCAGA+TGG | - | chr4.4:88104827-88104846 | None:intergenic | 25.0% |
| ! | CAATGTTTAATAAAATGCAC+TGG | + | chr4.4:88102420-88102439 | MS.gene37310:intron | 25.0% |
| ! | GATTCAATTGTTCAACAAAT+TGG | + | chr4.4:88106369-88106388 | MS.gene37310:intron | 25.0% |
| ! | GCAAAGCATAAATACATTAA+TGG | - | chr4.4:88104560-88104579 | None:intergenic | 25.0% |
| ! | GTATTACCTAGATTCAATAA+TGG | - | chr4.4:88105383-88105402 | None:intergenic | 25.0% |
| ! | TAAACATTGCTTCATTTCAT+AGG | - | chr4.4:88102409-88102428 | None:intergenic | 25.0% |
| ! | TAAGAGAATTAAGTAGTTTG+AGG | - | chr4.4:88105357-88105376 | None:intergenic | 25.0% |
| ! | TAATTAGCGTAAAAAAGGTA+AGG | + | chr4.4:88101896-88101915 | MS.gene37310:intron | 25.0% |
| ! | TGATATGATGAATATACCTT+GGG | - | chr4.4:88101743-88101762 | None:intergenic | 25.0% |
| ! | TGTTGTAATTAGCGTAAAAA+AGG | + | chr4.4:88101891-88101910 | MS.gene37310:intron | 25.0% |
| ! | TTTCTTTCTTTCTCATTCTA+GGG | + | chr4.4:88105868-88105887 | MS.gene37310:intron | 25.0% |
| !! | AAAGTAAACATCTTCAAGTT+TGG | + | chr4.4:88103321-88103340 | MS.gene37310:CDS | 25.0% |
| !! | AAGTATACTACAAACTTTTG+AGG | - | chr4.4:88106406-88106425 | None:intergenic | 25.0% |
| !! | ATAAGTGTCTTGTCTAATTT+TGG | + | chr4.4:88100991-88101010 | MS.gene37310:intron | 25.0% |
| !! | ATATTTAAGACTGTAAACTG+TGG | - | chr4.4:88103689-88103708 | None:intergenic | 25.0% |
| !! | TGTTGCAAATAAGATTTTGT+TGG | + | chr4.4:88101471-88101490 | MS.gene37310:intron | 25.0% |
| !! | TTTCCATATAGTTTTTGCTA+AGG | + | chr4.4:88104668-88104687 | MS.gene37310:intron | 25.0% |
| !! | TTTTCTTTCTTTCTCATTCT+AGG | + | chr4.4:88105867-88105886 | MS.gene37310:intron | 25.0% |
| !!! | AAACTTTTAAAGAAGATTCC+TGG | - | chr4.4:88105964-88105983 | None:intergenic | 25.0% |
| !!! | AACTTTTAAAGAAGATTCCT+GGG | - | chr4.4:88105963-88105982 | None:intergenic | 25.0% |
| !!! | AATTATTGGTGAAGTATTGA+TGG | + | chr4.4:88104903-88104922 | MS.gene37310:intron | 25.0% |
| !!! | ATCTACAATTTTTGGGTAAT+TGG | + | chr4.4:88106225-88106244 | MS.gene37310:intron | 25.0% |
| !!! | ATGTTCATTTTTAGGATAGA+CGG | + | chr4.4:88103946-88103965 | MS.gene37310:intron | 25.0% |
| !!! | CATCTTCTATTTTTCAGATT+TGG | + | chr4.4:88101552-88101571 | MS.gene37310:intron | 25.0% |
| !!! | CTAAATTACTTTTGGATCTT+TGG | + | chr4.4:88103000-88103019 | MS.gene37310:intron | 25.0% |
| !!! | GAATTTGTTGGTCAAAATTT+TGG | + | chr4.4:88105650-88105669 | MS.gene37310:intron | 25.0% |
| !!! | TATGAGTTTAATTCTGAAAC+AGG | + | chr4.4:88102908-88102927 | MS.gene37310:CDS | 25.0% |
| !!! | TGAAGTATTGATGGTATTTT+TGG | + | chr4.4:88104912-88104931 | MS.gene37310:intron | 25.0% |
| !!! | TGACATCATTTTAGTTGAAT+AGG | - | chr4.4:88101380-88101399 | None:intergenic | 25.0% |
| !!! | TTTACTTTTATGCCTTAACA+GGG | + | chr4.4:88103239-88103258 | MS.gene37310:intron | 25.0% |
| !!! | TTTTACTTTTATGCCTTAAC+AGG | + | chr4.4:88103238-88103257 | MS.gene37310:intron | 25.0% |
| AAAAAGATTTGTAGAGTGAC+GGG | - | chr4.4:88101342-88101361 | None:intergenic | 30.0% | |
| AAAAGGCAAGAATTACTAGT+TGG | - | chr4.4:88106475-88106494 | None:intergenic | 30.0% | |
| AAACTGCTTCCTTGAATTTA+CGG | + | chr4.4:88101290-88101309 | MS.gene37310:intron | 30.0% | |
| AAAGCAGCATAATCAACATA+TGG | - | chr4.4:88102745-88102764 | None:intergenic | 30.0% | |
| AAGTAAGTTAAATGCTCCAT+GGG | - | chr4.4:88105454-88105473 | None:intergenic | 30.0% | |
| ACACCTTAGCAAAAACTATA+TGG | - | chr4.4:88104674-88104693 | None:intergenic | 30.0% | |
| ACATTAGAAATACTGCACAT+TGG | + | chr4.4:88102576-88102595 | MS.gene37310:intron | 30.0% | |
| ACTGACTAATCTCAATTTAC+TGG | + | chr4.4:88105017-88105036 | MS.gene37310:CDS | 30.0% | |
| AGATATTTACCTCTTCAGAA+GGG | + | chr4.4:88101798-88101817 | MS.gene37310:intron | 30.0% | |
| AGTTCATAATAACCTGCAAA+AGG | - | chr4.4:88105306-88105325 | None:intergenic | 30.0% | |
| ATAAAATGTGAACCAATGTC+TGG | + | chr4.4:88102337-88102356 | MS.gene37310:intron | 30.0% | |
| ATACAATGCATGGAGATTAA+AGG | - | chr4.4:88102152-88102171 | None:intergenic | 30.0% | |
| ATAGCGAAAGTTCAAAGAAA+AGG | + | chr4.4:88103576-88103595 | MS.gene37310:CDS | 30.0% | |
| ATATGATGAATATACCTTGG+GGG | - | chr4.4:88101741-88101760 | None:intergenic | 30.0% | |
| ATCCAAATGAGCAAACAATT+GGG | + | chr4.4:88104989-88105008 | MS.gene37310:CDS | 30.0% | |
| ATCCATATATCATCATACAG+TGG | + | chr4.4:88102818-88102837 | MS.gene37310:intron | 30.0% | |
| ATGAAAATAGTGTGTTGCAA+TGG | - | chr4.4:88106312-88106331 | None:intergenic | 30.0% | |
| ATGACACTTACCATATCATT+AGG | - | chr4.4:88103166-88103185 | None:intergenic | 30.0% | |
| ATGGAATTTGGATGCAATAA+AGG | - | chr4.4:88103609-88103628 | None:intergenic | 30.0% | |
| ATTCAAATGACAGAAATACC+CGG | - | chr4.4:88102018-88102037 | None:intergenic | 30.0% | |
| ATTTCAGAACCGTAAATTCA+AGG | - | chr4.4:88101302-88101321 | None:intergenic | 30.0% | |
| CTAAATGGAACCAAAAATGA+GGG | - | chr4.4:88103832-88103851 | None:intergenic | 30.0% | |
| GAAAAAGATTTGTAGAGTGA+CGG | - | chr4.4:88101343-88101362 | None:intergenic | 30.0% | |
| GAATAGGATCTCTACTTTAA+GGG | - | chr4.4:88104068-88104087 | None:intergenic | 30.0% | |
| GACACTTATCCTAACATAAA+TGG | - | chr4.4:88100980-88100999 | None:intergenic | 30.0% | |
| GAGAAATAAGGGTAGAAAAA+TGG | + | chr4.4:88103987-88104006 | MS.gene37310:intron | 30.0% | |
| GAGAATGTGGTATTAAATGT+GGG | + | chr4.4:88103722-88103741 | MS.gene37310:CDS | 30.0% | |
| GATATGATGAATATACCTTG+GGG | - | chr4.4:88101742-88101761 | None:intergenic | 30.0% | |
| GGACTTTCATTTGCAAAAAA+AGG | + | chr4.4:88102848-88102867 | MS.gene37310:CDS | 30.0% | |
| GTTCCATTTAGGTGATTATT+AGG | + | chr4.4:88103841-88103860 | MS.gene37310:intron | 30.0% | |
| GTTGCTTAACAAATATTGCA+AGG | + | chr4.4:88101221-88101240 | MS.gene37310:intron | 30.0% | |
| TAAAATGTGAACCAATGTCT+GGG | + | chr4.4:88102338-88102357 | MS.gene37310:intron | 30.0% | |
| TAAACTTCTCGATAAACACT+TGG | - | chr4.4:88101267-88101286 | None:intergenic | 30.0% | |
| TACAATGCATGGAGATTAAA+GGG | - | chr4.4:88102151-88102170 | None:intergenic | 30.0% | |
| TAGACTACGAGTTATAAGTT+GGG | + | chr4.4:88103114-88103133 | MS.gene37310:CDS | 30.0% | |
| TAGATATTTACCTCTTCAGA+AGG | + | chr4.4:88101797-88101816 | MS.gene37310:intron | 30.0% | |
| TCACCTAATAATCACCTAAA+TGG | - | chr4.4:88103847-88103866 | None:intergenic | 30.0% | |
| TCCATATATCATCATACAGT+GGG | + | chr4.4:88102819-88102838 | MS.gene37310:intron | 30.0% | |
| TGAATAGGATCTCTACTTTA+AGG | - | chr4.4:88104069-88104088 | None:intergenic | 30.0% | |
| TGACACTTACCATATCATTA+GGG | - | chr4.4:88103165-88103184 | None:intergenic | 30.0% | |
| TTAATTGACCTTGGTTATCT+TGG | + | chr4.4:88102211-88102230 | MS.gene37310:intron | 30.0% | |
| TTAGTATATCTGACCTTTCT+TGG | - | chr4.4:88103786-88103805 | None:intergenic | 30.0% | |
| TTCTTTCTTTCTCATTCTAG+GGG | + | chr4.4:88105869-88105888 | MS.gene37310:intron | 30.0% | |
| TTGGAAGACAGATTTAAAAG+TGG | - | chr4.4:88106536-88106555 | None:intergenic | 30.0% | |
| TTGGTCTGAAAAAATCTCAT+GGG | + | chr4.4:88102303-88102322 | MS.gene37310:intron | 30.0% | |
| TTTCATGAGCCATTTATGTT+AGG | + | chr4.4:88100968-88100987 | MS.gene37310:intron | 30.0% | |
| ! | AGACCAACTATAAGTCTTTT+GGG | - | chr4.4:88102290-88102309 | None:intergenic | 30.0% |
| ! | GGTGTGTACTAAATTACTTT+TGG | + | chr4.4:88102992-88103011 | MS.gene37310:intron | 30.0% |
| ! | GTAAGTGTCATTACTTATTG+TGG | + | chr4.4:88103175-88103194 | MS.gene37310:intron | 30.0% |
| ! | GTTAGGTTATCTTTGTGTTT+TGG | + | chr4.4:88104441-88104460 | MS.gene37310:intron | 30.0% |
| ! | TAAAGCTAATCATGAGTTGA+AGG | - | chr4.4:88104712-88104731 | None:intergenic | 30.0% |
| ! | TACAATGCTTTTCTTAAGCA+CGG | - | chr4.4:88106106-88106125 | None:intergenic | 30.0% |
| ! | TCATTCAAATGAGTGCTTTT+TGG | + | chr4.4:88102123-88102142 | MS.gene37310:intron | 30.0% |
| ! | TTTTCTTACACCCTCATTTT+TGG | + | chr4.4:88103819-88103838 | MS.gene37310:intron | 30.0% |
| !! | AATTTTGACCAACAAATTCC+TGG | - | chr4.4:88105649-88105668 | None:intergenic | 30.0% |
| !! | GAACTCACGATAGTTATTTT+AGG | + | chr4.4:88104593-88104612 | MS.gene37310:intron | 30.0% |
| !! | GATTACTGTTTTATTGACAG+CGG | + | chr4.4:88104502-88104521 | MS.gene37310:intron | 30.0% |
| !! | GTAAAAGTGTTAATTGACCT+TGG | + | chr4.4:88102202-88102221 | MS.gene37310:intron | 30.0% |
| !!! | TGTTCATTTTTAGGATAGAC+GGG | + | chr4.4:88103947-88103966 | MS.gene37310:intron | 30.0% |
| AAAAAAGTCCATCTCTTCAC+TGG | + | chr4.4:88102958-88102977 | MS.gene37310:CDS | 35.0% | |
| AAATAAATTGGAGTGGAGTG+AGG | - | chr4.4:88104873-88104892 | None:intergenic | 35.0% | |
| AAGTTTCTCCAAGATAACCA+AGG | - | chr4.4:88102222-88102241 | None:intergenic | 35.0% | |
| AATTTGAATGCCTCTTCTGA+AGG | + | chr4.4:88103494-88103513 | MS.gene37310:CDS | 35.0% | |
| ACCAAACATCAAATGCAGAA+AGG | - | chr4.4:88100942-88100961 | None:intergenic | 35.0% | |
| AGACAAAGTCGAAAGTGATA+AGG | + | chr4.4:88103550-88103569 | MS.gene37310:CDS | 35.0% | |
| AGATAAGTGATCGAGAAAGT+GGG | - | chr4.4:88105272-88105291 | None:intergenic | 35.0% | |
| AGTCTATGTAATTGTGAACG+AGG | + | chr4.4:88102536-88102555 | MS.gene37310:intron | 35.0% | |
| AGTGTATGAAACCGAAGAAA+GGG | - | chr4.4:88102503-88102522 | None:intergenic | 35.0% | |
| ATAAACACAGTTCAGTACAC+AGG | - | chr4.4:88105232-88105251 | None:intergenic | 35.0% | |
| ATACTTGACATGCTTGTGAA+AGG | + | chr4.4:88106420-88106439 | MS.gene37310:intron | 35.0% | |
| ATAGGGTAGGGAAAATTCTT+AGG | - | chr4.4:88102391-88102410 | None:intergenic | 35.0% | |
| ATATCATGAACTCCATCTGA+TGG | - | chr4.4:88101614-88101633 | None:intergenic | 35.0% | |
| ATATCTGACCTTTCTTGGAA+AGG | - | chr4.4:88103781-88103800 | None:intergenic | 35.0% | |
| ATGCAAATTGATCGTTGGAT+TGG | - | chr4.4:88101448-88101467 | None:intergenic | 35.0% | |
| ATTAAGTAGTTTGAGGACGT+TGG | - | chr4.4:88105350-88105369 | None:intergenic | 35.0% | |
| ATTGCTTCATTTCATAGGGT+AGG | - | chr4.4:88102404-88102423 | None:intergenic | 35.0% | |
| ATTTATGCCAACCCTTTCTT+CGG | + | chr4.4:88102489-88102508 | MS.gene37310:intron | 35.0% | |
| CAAACTTTCTCCATCATCTT+TGG | + | chr4.4:88104419-88104438 | MS.gene37310:intron | 35.0% | |
| CAACAATGCAAATTGATCGT+TGG | - | chr4.4:88101453-88101472 | None:intergenic | 35.0% | |
| CAAGTAAGTTAAATGCTCCA+TGG | - | chr4.4:88105455-88105474 | None:intergenic | 35.0% | |
| CCAAACATCAAATGCAGAAA+GGG | - | chr4.4:88100941-88100960 | None:intergenic | 35.0% | |
| CCTAAATGGAACCAAAAATG+AGG | - | chr4.4:88103833-88103852 | None:intergenic | 35.0% | |
| CGATGTATATTTCCCTGTTA+AGG | - | chr4.4:88103254-88103273 | None:intergenic | 35.0% | |
| CTAGACTACGAGTTATAAGT+TGG | + | chr4.4:88103113-88103132 | MS.gene37310:CDS | 35.0% | |
| GAGCAAAAGACCAAGAAAAT+GGG | - | chr4.4:88104469-88104488 | None:intergenic | 35.0% | |
| GATAACCTAACCAAAGATGA+TGG | - | chr4.4:88104432-88104451 | None:intergenic | 35.0% | |
| GATCCAAATGAGCAAACAAT+TGG | + | chr4.4:88104988-88105007 | MS.gene37310:CDS | 35.0% | |
| GATTACTCATCATACCAAAG+TGG | - | chr4.4:88104801-88104820 | None:intergenic | 35.0% | |
| GCTTTCTCTACGAAAATCAA+TGG | - | chr4.4:88105592-88105611 | None:intergenic | 35.0% | |
| GGAGAATGTGGTATTAAATG+TGG | + | chr4.4:88103721-88103740 | MS.gene37310:CDS | 35.0% | |
| GTAAATTCAAGGAAGCAGTT+TGG | - | chr4.4:88101291-88101310 | None:intergenic | 35.0% | |
| GTCTATGTAATTGTGAACGA+GGG | + | chr4.4:88102537-88102556 | MS.gene37310:intron | 35.0% | |
| GTGAATGCATGATTGTGAAT+AGG | - | chr4.4:88104084-88104103 | None:intergenic | 35.0% | |
| GTTAAAGGAACCTGTTCTTA+CGG | + | chr4.4:88100840-88100859 | MS.gene37310:CDS | 35.0% | |
| TAAATCATCTTCATTGCCAC+CGG | - | chr4.4:88103429-88103448 | None:intergenic | 35.0% | |
| TACTTTCTCCATTGTGTTGT+GGG | + | chr4.4:88101860-88101879 | MS.gene37310:intron | 35.0% | |
| TAGGGAAAATTCTTAGGCAA+TGG | - | chr4.4:88102385-88102404 | None:intergenic | 35.0% | |
| TCCAAATGAGCAAACAATTG+GGG | + | chr4.4:88104990-88105009 | MS.gene37310:CDS | 35.0% | |
| TCCCACTGTATGATGATATA+TGG | - | chr4.4:88102823-88102842 | None:intergenic | 35.0% | |
| TCTGAAAAAATCTCATGGGT+GGG | + | chr4.4:88102307-88102326 | MS.gene37310:intron | 35.0% | |
| TGCTACAATACAGTATGACA+AGG | + | chr4.4:88106281-88106300 | MS.gene37310:intron | 35.0% | |
| TGTCTAAGAAACTTGAGAGT+TGG | - | chr4.4:88106555-88106574 | None:intergenic | 35.0% | |
| TTAAGTTTAGGAACTGTGAG+TGG | + | chr4.4:88103353-88103372 | MS.gene37310:CDS | 35.0% | |
| TTACTTTCTCCATTGTGTTG+TGG | + | chr4.4:88101859-88101878 | MS.gene37310:intron | 35.0% | |
| TTCAAATGACAGAAATACCC+GGG | - | chr4.4:88102017-88102036 | None:intergenic | 35.0% | |
| TTCTTAGACATCCTTTACAC+CGG | + | chr4.4:88106565-88106584 | MS.gene37310:CDS | 35.0% | |
| TTGAAAAACAACTCCCACTA+GGG | - | chr4.4:88103909-88103928 | None:intergenic | 35.0% | |
| TTGCTTCATTTCATAGGGTA+GGG | - | chr4.4:88102403-88102422 | None:intergenic | 35.0% | |
| TTTAGCAGCAACCAAACAAA+TGG | + | chr4.4:88105738-88105757 | MS.gene37310:intron | 35.0% | |
| TTTCTCCATCATCTTTGGTT+AGG | + | chr4.4:88104424-88104443 | MS.gene37310:intron | 35.0% | |
| ! | AGTTTTCCATCTTGCTTGTA+AGG | + | chr4.4:88105526-88105545 | MS.gene37310:intron | 35.0% |
| ! | CAGACCAACTATAAGTCTTT+TGG | - | chr4.4:88102291-88102310 | None:intergenic | 35.0% |
| ! | CAGATTTGGAATACAAACAG+TGG | + | chr4.4:88101566-88101585 | MS.gene37310:intron | 35.0% |
| ! | CATGGAGCATTTAACTTACT+TGG | + | chr4.4:88105453-88105472 | MS.gene37310:intron | 35.0% |
| ! | GGGTAATTGGTAGTTATCTT+AGG | + | chr4.4:88106238-88106257 | MS.gene37310:intron | 35.0% |
| ! | GTAAACATCTTCAAGTTTGG+AGG | + | chr4.4:88103324-88103343 | MS.gene37310:CDS | 35.0% |
| ! | GTTGGTCTGAAAAAATCTCA+TGG | + | chr4.4:88102302-88102321 | MS.gene37310:intron | 35.0% |
| ! | GTTTTCCATCTTGCTTGTAA+GGG | + | chr4.4:88105527-88105546 | MS.gene37310:intron | 35.0% |
| ! | TTACTTATTAGCTCTCGGAA+CGG | + | chr4.4:88101923-88101942 | MS.gene37310:CDS | 35.0% |
| ! | TTCGACTTTGTCTGTTTTCA+AGG | - | chr4.4:88103543-88103562 | None:intergenic | 35.0% |
| ! | TTTGTGTTGTTGGACATGAT+GGG | + | chr4.4:88102879-88102898 | MS.gene37310:CDS | 35.0% |
| !! | GGTCAAAATTTTGGTCCTTT+AGG | + | chr4.4:88105659-88105678 | MS.gene37310:intron | 35.0% |
| !! | TGTTTTGGATCCCATTTTCT+TGG | + | chr4.4:88104456-88104475 | MS.gene37310:intron | 35.0% |
| !!! | CCTCATTTTTGGTTCCATTT+AGG | + | chr4.4:88103830-88103849 | MS.gene37310:intron | 35.0% |
| AAATGCAGAAAGGGAGATGA+AGG | - | chr4.4:88100932-88100951 | None:intergenic | 40.0% | |
| AAGTTGGGAAACTGGTAAAG+AGG | + | chr4.4:88103129-88103148 | MS.gene37310:CDS | 40.0% | |
| ACTGAAAGCAGCAGTAGAAA+AGG | + | chr4.4:88104282-88104301 | MS.gene37310:intron | 40.0% | |
| AGAAGTAGACATTTCAGCCA+TGG | - | chr4.4:88105917-88105936 | None:intergenic | 40.0% | |
| ATAGCTGCATAGTCACCATT+AGG | - | chr4.4:88100874-88100893 | None:intergenic | 40.0% | |
| ATCCAAATTCCATTCCATGG+GGG | + | chr4.4:88103616-88103635 | MS.gene37310:CDS | 40.0% | |
| ATGCAGTTTCACTGGGATAA+AGG | + | chr4.4:88101652-88101671 | MS.gene37310:CDS | 40.0% | |
| CAGATAAGTGATCGAGAAAG+TGG | - | chr4.4:88105273-88105292 | None:intergenic | 40.0% | |
| CAGCTATTCTGTCTGCAAAT+GGG | + | chr4.4:88100887-88100906 | MS.gene37310:CDS | 40.0% | |
| CAGTGTATGAAACCGAAGAA+AGG | - | chr4.4:88102504-88102523 | None:intergenic | 40.0% | |
| CATCCAAATTCCATTCCATG+GGG | + | chr4.4:88103615-88103634 | MS.gene37310:CDS | 40.0% | |
| CCCTTTCTGCATTTGATGTT+TGG | + | chr4.4:88100938-88100957 | MS.gene37310:intron | 40.0% | |
| CTTCAGGTGGAACTTACATA+TGG | + | chr4.4:88103468-88103487 | MS.gene37310:CDS | 40.0% | |
| CTTTCTTCGGTTTCATACAC+TGG | + | chr4.4:88102502-88102521 | MS.gene37310:intron | 40.0% | |
| GATCAATGTGAGGTTGTTGA+TGG | + | chr4.4:88104952-88104971 | MS.gene37310:intron | 40.0% | |
| GCATCCAAATTCCATTCCAT+GGG | + | chr4.4:88103614-88103633 | MS.gene37310:CDS | 40.0% | |
| GCTCATTTGGATCATCATCA+AGG | - | chr4.4:88104981-88105000 | None:intergenic | 40.0% | |
| GGACCCAAAAGACTTATAGT+TGG | + | chr4.4:88102284-88102303 | MS.gene37310:intron | 40.0% | |
| GGAGAAACTTGAGCATTCTT+TGG | + | chr4.4:88102232-88102251 | MS.gene37310:intron | 40.0% | |
| GGAGCAAAAGACCAAGAAAA+TGG | - | chr4.4:88104470-88104489 | None:intergenic | 40.0% | |
| GGCAAGAATTACTAGTTGGT+TGG | - | chr4.4:88106471-88106490 | None:intergenic | 40.0% | |
| GTACAAGCAATCCAGAAGAA+GGG | - | chr4.4:88105181-88105200 | None:intergenic | 40.0% | |
| GTATTGCATGCAGTTTCACT+GGG | + | chr4.4:88101645-88101664 | MS.gene37310:CDS | 40.0% | |
| GTCTGAAAAAATCTCATGGG+TGG | + | chr4.4:88102306-88102325 | MS.gene37310:intron | 40.0% | |
| GTTAACAGCCAGGAATTTGT+TGG | + | chr4.4:88105638-88105657 | MS.gene37310:intron | 40.0% | |
| GTTCCGAGAGCTAATAAGTA+AGG | - | chr4.4:88101924-88101943 | None:intergenic | 40.0% | |
| GTTGAAAAACAACTCCCACT+AGG | - | chr4.4:88103910-88103929 | None:intergenic | 40.0% | |
| TAATTTCATCAAAGCCCCCA+AGG | + | chr4.4:88101724-88101743 | MS.gene37310:intron | 40.0% | |
| TAGTGATTTAGGGGAGAATG+TGG | + | chr4.4:88103709-88103728 | MS.gene37310:CDS | 40.0% | |
| TATGAAACCGAAGAAAGGGT+TGG | - | chr4.4:88102499-88102518 | None:intergenic | 40.0% | |
| TATTCTGTCTGCAAATGGGA+CGG | + | chr4.4:88100891-88100910 | MS.gene37310:CDS | 40.0% | |
| TCATCATACAGTGGGATTTG+CGG | + | chr4.4:88102827-88102846 | MS.gene37310:intron | 40.0% | |
| TCCCCAATTGTTTGCTCATT+TGG | - | chr4.4:88104994-88105013 | None:intergenic | 40.0% | |
| TCTTAGACATCCTTTACACC+GGG | + | chr4.4:88106566-88106585 | MS.gene37310:CDS | 40.0% | |
| TGAAACAGGAGAGCTTCTAA+AGG | + | chr4.4:88102922-88102941 | MS.gene37310:CDS | 40.0% | |
| TGCATCCAAATTCCATTCCA+TGG | + | chr4.4:88103613-88103632 | MS.gene37310:CDS | 40.0% | |
| TGTACAAGCAATCCAGAAGA+AGG | - | chr4.4:88105182-88105201 | None:intergenic | 40.0% | |
| TGTATTGCATGCAGTTTCAC+TGG | + | chr4.4:88101644-88101663 | MS.gene37310:CDS | 40.0% | |
| TTCAAATGTGCGTACCACTT+TGG | + | chr4.4:88104784-88104803 | MS.gene37310:intron | 40.0% | |
| TTCAAGTGAGTTCTGCATGA+TGG | + | chr4.4:88105996-88106015 | MS.gene37310:intron | 40.0% | |
| ! | AAATACTTTTCCTGCCCTAG+TGG | + | chr4.4:88103892-88103911 | MS.gene37310:intron | 40.0% |
| ! | AACTTGCTCTTTGTCACTCT+TGG | - | chr4.4:88105088-88105107 | None:intergenic | 40.0% |
| ! | AATACTTTTCCTGCCCTAGT+GGG | + | chr4.4:88103893-88103912 | MS.gene37310:intron | 40.0% |
| ! | ACAACTGACAAGGTGGATTT+GGG | + | chr4.4:88104358-88104377 | MS.gene37310:CDS | 40.0% |
| ! | CGAGTTATAAGTTGGGAAAC+TGG | + | chr4.4:88103121-88103140 | MS.gene37310:CDS | 40.0% |
| ! | CTTTGTGTTGTTGGACATGA+TGG | + | chr4.4:88102878-88102897 | MS.gene37310:CDS | 40.0% |
| ! | GGACCTTACTTATTAGCTCT+CGG | + | chr4.4:88101918-88101937 | MS.gene37310:CDS | 40.0% |
| ! | TCTGAAGTGCCCTAATGATA+TGG | + | chr4.4:88103153-88103172 | MS.gene37310:CDS | 40.0% |
| ! | TGGAGGTGTGACTTAAGTTT+AGG | + | chr4.4:88103341-88103360 | MS.gene37310:CDS | 40.0% |
| !! | ATGCAAGCTGTGTTGACTTA+TGG | + | chr4.4:88103650-88103669 | MS.gene37310:CDS | 40.0% |
| !! | TCATTCTAGGGGTGCAATTT+TGG | + | chr4.4:88105880-88105899 | MS.gene37310:intron | 40.0% |
| !! | TCTTATTTCTGTCTGTCGCT+TGG | + | chr4.4:88104258-88104277 | MS.gene37310:intron | 40.0% |
| AAGGCTGTCATGCTTCTGAA+TGG | - | chr4.4:88103762-88103781 | None:intergenic | 45.0% | |
| AGTAGTTTGAGGACGTTGGA+TGG | - | chr4.4:88105346-88105365 | None:intergenic | 45.0% | |
| AGTTTAGGAACTGTGAGTGG+TGG | + | chr4.4:88103356-88103375 | MS.gene37310:CDS | 45.0% | |
| ATCCAAGAATGACACAGAGC+TGG | + | chr4.4:88105050-88105069 | MS.gene37310:CDS | 45.0% | |
| ATGGACGTCACTTGTGAAAC+TGG | - | chr4.4:88102726-88102745 | None:intergenic | 45.0% | |
| CAAATCCACCTTGTCAGTTG+TGG | - | chr4.4:88104359-88104378 | None:intergenic | 45.0% | |
| CAAATTCCTGGCTGTTAACC+AGG | - | chr4.4:88105637-88105656 | None:intergenic | 45.0% | |
| CATGACAGCCTTTCCAAGAA+AGG | + | chr4.4:88103770-88103789 | MS.gene37310:CDS | 45.0% | |
| CTACTTCTACAGCATGCAAG+TGG | + | chr4.4:88105929-88105948 | MS.gene37310:CDS | 45.0% | |
| CTGCATGAATACCCAGACAT+TGG | - | chr4.4:88102352-88102371 | None:intergenic | 45.0% | |
| CTTACGGCTTTCACACCTAA+TGG | + | chr4.4:88100856-88100875 | MS.gene37310:CDS | 45.0% | |
| CTTAGACATCCTTTACACCG+GGG | + | chr4.4:88106567-88106586 | MS.gene37310:CDS | 45.0% | |
| CTTGTACACGCAAGATGAGA+AGG | + | chr4.4:88105194-88105213 | MS.gene37310:CDS | 45.0% | |
| GAGTGGCAATCAAGAACCAA+TGG | - | chr4.4:88103407-88103426 | None:intergenic | 45.0% | |
| GCAAAGAGATGATACTCTCC+TGG | + | chr4.4:88105616-88105635 | MS.gene37310:intron | 45.0% | |
| GCAGCTATTCTGTCTGCAAA+TGG | + | chr4.4:88100886-88100905 | MS.gene37310:CDS | 45.0% | |
| GGACAGCTTCTTTGTGTTGT+TGG | + | chr4.4:88102869-88102888 | MS.gene37310:CDS | 45.0% | |
| GTAGTTTGAGGACGTTGGAT+GGG | - | chr4.4:88105345-88105364 | None:intergenic | 45.0% | |
| GTGTACTTGACCTTCAGAAG+AGG | - | chr4.4:88103507-88103526 | None:intergenic | 45.0% | |
| TAAAGCAGCCCACAACACAA+TGG | - | chr4.4:88101871-88101890 | None:intergenic | 45.0% | |
| TCACTGGGATAAAGGTAGTG+TGG | + | chr4.4:88101660-88101679 | MS.gene37310:intron | 45.0% | |
| TCAGTTGTGGTTGGAAGATC+AGG | - | chr4.4:88104346-88104365 | None:intergenic | 45.0% | |
| TCCATCTTGCTTGTAAGGGA+GGG | + | chr4.4:88105531-88105550 | MS.gene37310:intron | 45.0% | |
| TCTTCCAACCACAACTGACA+AGG | + | chr4.4:88104348-88104367 | MS.gene37310:CDS | 45.0% | |
| TGACAGAAATACCCGGGAAT+CGG | - | chr4.4:88102011-88102030 | None:intergenic | 45.0% | |
| TGAGAAAGCCAGTGAAGAGA+TGG | - | chr4.4:88102969-88102988 | None:intergenic | 45.0% | |
| TGCAAGTGGAATAATGTCCC+AGG | + | chr4.4:88105943-88105962 | MS.gene37310:CDS | 45.0% | |
| TGGCAGATGTCTTACATGAG+TGG | + | chr4.4:88105473-88105492 | MS.gene37310:intron | 45.0% | |
| TTCCATCTTGCTTGTAAGGG+AGG | + | chr4.4:88105530-88105549 | MS.gene37310:intron | 45.0% | |
| TTCCCCCATGGAATGGAATT+TGG | - | chr4.4:88103621-88103640 | None:intergenic | 45.0% | |
| TTGATGTTTCCACTGGTGAG+AGG | + | chr4.4:88101967-88101986 | MS.gene37310:CDS | 45.0% | |
| ! | ATCCAGCTCTGTGTCATTCT+TGG | - | chr4.4:88105055-88105074 | None:intergenic | 45.0% |
| ! | CACAACTGACAAGGTGGATT+TGG | + | chr4.4:88104357-88104376 | MS.gene37310:CDS | 45.0% |
| ! | CATTGTTTGCCCTTCTGAAG+AGG | - | chr4.4:88101810-88101829 | None:intergenic | 45.0% |
| ! | TGTGATGCAACTCCTTTTGC+AGG | + | chr4.4:88105291-88105310 | MS.gene37310:intron | 45.0% |
| ! | TGTTGTTGGACATGATGGGA+AGG | + | chr4.4:88102883-88102902 | MS.gene37310:CDS | 45.0% |
| ! | TTGGTTCTTGATTGCCACTC+CGG | + | chr4.4:88103407-88103426 | MS.gene37310:CDS | 45.0% |
| ! | TTTTGGCATGTGCTCTTCCA+TGG | + | chr4.4:88105897-88105916 | MS.gene37310:CDS | 45.0% |
| !! | GTGGAGATTTGTTAGCAGAG+TGG | + | chr4.4:88101585-88101604 | MS.gene37310:CDS | 45.0% |
| !! | TCTTCACTGGCTTTCTCACA+TGG | + | chr4.4:88102971-88102990 | MS.gene37310:CDS | 45.0% |
| AAAACAACTCCCACTAGGGC+AGG | - | chr4.4:88103905-88103924 | None:intergenic | 50.0% | |
| AACCAATGGAGCATGCCTCA+AGG | - | chr4.4:88103393-88103412 | None:intergenic | 50.0% | |
| ACCAATGGAGCATGCCTCAA+GGG | - | chr4.4:88103392-88103411 | None:intergenic | 50.0% | |
| AGCAATCCAGAAGAAGGGTG+CGG | - | chr4.4:88105176-88105195 | None:intergenic | 50.0% | |
| CATCTTGCTTGTAAGGGAGG+GGG | + | chr4.4:88105533-88105552 | MS.gene37310:intron | 50.0% | |
| CCATCTTGCTTGTAAGGGAG+GGG | + | chr4.4:88105532-88105551 | MS.gene37310:intron | 50.0% | |
| CCTACTAGTCATCCGATTCC+CGG | + | chr4.4:88101996-88102015 | MS.gene37310:CDS | 50.0% | |
| CTACTAGTCATCCGATTCCC+GGG | + | chr4.4:88101997-88102016 | MS.gene37310:CDS | 50.0% | |
| CTCGCTGTTGATGTTTCCAC+TGG | + | chr4.4:88101960-88101979 | MS.gene37310:CDS | 50.0% | |
| GGTGTGAAAGCCGTAAGAAC+AGG | - | chr4.4:88100853-88100872 | None:intergenic | 50.0% | |
| GTCTCAGCAGTTACGTCTTC+AGG | + | chr4.4:88103452-88103471 | MS.gene37310:CDS | 50.0% | |
| TACTCTCCTGGTTAACAGCC+AGG | + | chr4.4:88105628-88105647 | MS.gene37310:intron | 50.0% | |
| TATGCCAGACAGTGTTCCCA+TGG | + | chr4.4:88105435-88105454 | MS.gene37310:intron | 50.0% | |
| TCAGCAGTTACGTCTTCAGG+TGG | + | chr4.4:88103455-88103474 | MS.gene37310:CDS | 50.0% | |
| TCCAACCACAACTGACAAGG+TGG | + | chr4.4:88104351-88104370 | MS.gene37310:CDS | 50.0% | |
| TCCACCTTGTCAGTTGTGGT+TGG | - | chr4.4:88104355-88104374 | None:intergenic | 50.0% | |
| TTCCATTCCATGGGGGAAGA+CGG | + | chr4.4:88103623-88103642 | MS.gene37310:CDS | 50.0% | |
| TTTCCACTGGTGAGAGGAAG+TGG | + | chr4.4:88101973-88101992 | MS.gene37310:CDS | 50.0% | |
| ! | TTAGCTCTCGGAACGGAAGA+TGG | + | chr4.4:88101930-88101949 | MS.gene37310:CDS | 50.0% |
| ACCCTTGAGGCATGCTCCAT+TGG | + | chr4.4:88103388-88103407 | MS.gene37310:CDS | 55.0% | |
| AGATGACCGCACCCTTCTTC+TGG | + | chr4.4:88105167-88105186 | MS.gene37310:CDS | 55.0% | |
| CATCTTCATTGCCACCGGAG+TGG | - | chr4.4:88103424-88103443 | None:intergenic | 55.0% | |
| CCCCTCCCTTACAAGCAAGA+TGG | - | chr4.4:88105535-88105554 | None:intergenic | 55.0% | |
| CCGGGAATCGGATGACTAGT+AGG | - | chr4.4:88101999-88102018 | None:intergenic | 55.0% | |
| CTTGTAAGGGAGGGGGAAAG+AGG | + | chr4.4:88105540-88105559 | MS.gene37310:intron | 55.0% | |
| GAGTGGAGTGAGGAAGTCGA+GGG | - | chr4.4:88104863-88104882 | None:intergenic | 55.0% | |
| GCAGAGTGGAAGCCATCAGA+TGG | + | chr4.4:88101599-88101618 | MS.gene37310:CDS | 55.0% | |
| GCATGCCTCAAGGGTAGTGT+TGG | - | chr4.4:88103383-88103402 | None:intergenic | 55.0% | |
| GTGGTCCAACACTACCCTTG+AGG | + | chr4.4:88103375-88103394 | MS.gene37310:CDS | 55.0% | |
| GTTCTTGATTGCCACTCCGG+TGG | + | chr4.4:88103410-88103429 | MS.gene37310:CDS | 55.0% | |
| TGCTCCATGGGAACACTGTC+TGG | - | chr4.4:88105442-88105461 | None:intergenic | 55.0% | |
| AGGCCACTTCCTCTCACCAG+TGG | - | chr4.4:88101979-88101998 | None:intergenic | 60.0% | |
| CATCTGTCCGTCTTCCCCCA+TGG | - | chr4.4:88103633-88103652 | None:intergenic | 60.0% | |
| GGAGTGGAGTGAGGAAGTCG+AGG | - | chr4.4:88104864-88104883 | None:intergenic | 60.0% | |
| GTCCGTCTTCCCCCATGGAA+TGG | - | chr4.4:88103628-88103647 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 88100826 | 88106588 | 88100826 | ID=MS.gene37310 |
| chr4.4 | mRNA | 88100826 | 88106588 | 88100826 | ID=MS.gene37310.t1;Parent=MS.gene37310 |
| chr4.4 | exon | 88100826 | 88100918 | 88100826 | ID=MS.gene37310.t1.exon1;Parent=MS.gene37310.t1 |
| chr4.4 | CDS | 88100826 | 88100918 | 88100826 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
| chr4.4 | exon | 88101569 | 88101673 | 88101569 | ID=MS.gene37310.t1.exon2;Parent=MS.gene37310.t1 |
| chr4.4 | CDS | 88101569 | 88101673 | 88101569 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
| chr4.4 | exon | 88101903 | 88102018 | 88101903 | ID=MS.gene37310.t1.exon3;Parent=MS.gene37310.t1 |
| chr4.4 | CDS | 88101903 | 88102018 | 88101903 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
| chr4.4 | exon | 88102838 | 88102992 | 88102838 | ID=MS.gene37310.t1.exon4;Parent=MS.gene37310.t1 |
| chr4.4 | CDS | 88102838 | 88102992 | 88102838 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
| chr4.4 | exon | 88103086 | 88103174 | 88103086 | ID=MS.gene37310.t1.exon5;Parent=MS.gene37310.t1 |
| chr4.4 | CDS | 88103086 | 88103174 | 88103086 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
| chr4.4 | exon | 88103260 | 88103791 | 88103260 | ID=MS.gene37310.t1.exon6;Parent=MS.gene37310.t1 |
| chr4.4 | CDS | 88103260 | 88103791 | 88103260 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
| chr4.4 | exon | 88104293 | 88104379 | 88104293 | ID=MS.gene37310.t1.exon7;Parent=MS.gene37310.t1 |
| chr4.4 | CDS | 88104293 | 88104379 | 88104293 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
| chr4.4 | exon | 88104953 | 88105215 | 88104953 | ID=MS.gene37310.t1.exon8;Parent=MS.gene37310.t1 |
| chr4.4 | CDS | 88104953 | 88105215 | 88104953 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
| chr4.4 | exon | 88105313 | 88105395 | 88105313 | ID=MS.gene37310.t1.exon9;Parent=MS.gene37310.t1 |
| chr4.4 | CDS | 88105313 | 88105395 | 88105313 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
| chr4.4 | exon | 88105889 | 88106000 | 88105889 | ID=MS.gene37310.t1.exon10;Parent=MS.gene37310.t1 |
| chr4.4 | CDS | 88105889 | 88106000 | 88105889 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
| chr4.4 | exon | 88106514 | 88106588 | 88106514 | ID=MS.gene37310.t1.exon11;Parent=MS.gene37310.t1 |
| chr4.4 | CDS | 88106514 | 88106588 | 88106514 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
| Gene Sequence |
| Protein sequence |