Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37310.t1 | XP_013454685.1 | 93 | 570 | 29 | 1 | 1 | 570 | 1 | 559 | 2.80E-285 | 990.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37310.t1 | A0A072UH09 | 93.0 | 570 | 29 | 1 | 1 | 570 | 1 | 559 | 2.0e-285 | 990.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050427 | MS.gene37310 | 0.827979 | 1.16E-54 | -1.69E-46 |
MS.gene053492 | MS.gene37310 | 0.834917 | 2.27E-56 | -1.69E-46 |
MS.gene059935 | MS.gene37310 | 0.805855 | 1.09E-49 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37310.t1 | MTR_4g011300 | 95.088 | 570 | 17 | 1 | 1 | 570 | 1 | 559 | 0.0 | 1095 |
MS.gene37310.t1 | MTR_4g120740 | 25.500 | 600 | 367 | 13 | 10 | 567 | 10 | 571 | 2.63e-42 | 161 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene37310.t1 | AT1G15420 | 55.670 | 194 | 74 | 4 | 376 | 567 | 35 | 218 | 3.17e-58 | 196 |
MS.gene37310.t1 | AT1G15420 | 55.491 | 173 | 65 | 4 | 376 | 546 | 35 | 197 | 3.73e-50 | 172 |
MS.gene37310.t1 | AT5G11240 | 26.678 | 596 | 350 | 14 | 10 | 567 | 9 | 555 | 1.23e-45 | 170 |
Find 126 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCTTAAATATTAGTGATTT+AGG | 0.140856 | 4.4:+88103698 | MS.gene37310:CDS |
ATCCAGCTCTGTGTCATTCT+TGG | 0.154928 | 4.4:-88105052 | None:intergenic |
TCCCCAATTGTTTGCTCATT+TGG | 0.165741 | 4.4:-88104991 | None:intergenic |
TCATTCTAGGGGTGCAATTT+TGG | 0.170768 | 4.4:+88105880 | MS.gene37310:intron |
TTAGTATATCTGACCTTTCT+TGG | 0.181897 | 4.4:-88103783 | None:intergenic |
CACAACTGACAAGGTGGATT+TGG | 0.246483 | 4.4:+88104357 | MS.gene37310:CDS |
AAAGTAAACATCTTCAAGTT+TGG | 0.292180 | 4.4:+88103321 | MS.gene37310:CDS |
TCTTAAATATTAGTGATTTA+GGG | 0.295585 | 4.4:+88103699 | MS.gene37310:CDS |
ATGGAATTTGGATGCAATAA+AGG | 0.313012 | 4.4:-88103606 | None:intergenic |
ATGACACTTACCATATCATT+AGG | 0.325045 | 4.4:-88103163 | None:intergenic |
GTCTCAGCAGTTACGTCTTC+AGG | 0.326049 | 4.4:+88103452 | MS.gene37310:CDS |
ACTGACTAATCTCAATTTAC+TGG | 0.335974 | 4.4:+88105017 | MS.gene37310:CDS |
AACTTGCTCTTTGTCACTCT+TGG | 0.336193 | 4.4:-88105085 | None:intergenic |
TGGAGGTGTGACTTAAGTTT+AGG | 0.341028 | 4.4:+88103341 | MS.gene37310:CDS |
CTTACGGCTTTCACACCTAA+TGG | 0.350828 | 4.4:+88100856 | MS.gene37310:CDS |
GATGGTGAAGGGTAAGTTAA+AGG | 0.352630 | 4.4:+88100825 | None:intergenic |
GATCCAAATGAGCAAACAAT+TGG | 0.355713 | 4.4:+88104988 | MS.gene37310:CDS |
TGTATTGCATGCAGTTTCAC+TGG | 0.359064 | 4.4:+88101644 | MS.gene37310:CDS |
ATGCAGTTTCACTGGGATAA+AGG | 0.361884 | 4.4:+88101652 | MS.gene37310:CDS |
TCAGTTGTGGTTGGAAGATC+AGG | 0.364295 | 4.4:-88104343 | None:intergenic |
TATGAGTTTAATTCTGAAAC+AGG | 0.368224 | 4.4:+88102908 | MS.gene37310:CDS |
GGACAGCTTCTTTGTGTTGT+TGG | 0.373076 | 4.4:+88102869 | MS.gene37310:CDS |
AGATGACCGCACCCTTCTTC+TGG | 0.376441 | 4.4:+88105167 | MS.gene37310:CDS |
CGAGTTATAAGTTGGGAAAC+TGG | 0.378633 | 4.4:+88103121 | MS.gene37310:CDS |
CTTTGTGTTGTTGGACATGA+TGG | 0.379769 | 4.4:+88102878 | MS.gene37310:CDS |
TAAGAGAATTAAGTAGTTTG+AGG | 0.391173 | 4.4:-88105354 | None:intergenic |
TTATATCCATTATTGAATCT+AGG | 0.394282 | 4.4:+88105374 | MS.gene37310:CDS |
CCTACTAGTCATCCGATTCC+CGG | 0.395768 | 4.4:+88101996 | MS.gene37310:CDS |
ACCCTTGAGGCATGCTCCAT+TGG | 0.397420 | 4.4:+88103388 | MS.gene37310:CDS |
TCTGAAGTGCCCTAATGATA+TGG | 0.401133 | 4.4:+88103153 | MS.gene37310:CDS |
GCAGCTATTCTGTCTGCAAA+TGG | 0.415659 | 4.4:+88100886 | MS.gene37310:CDS |
ATCCAAATGAGCAAACAATT+GGG | 0.422843 | 4.4:+88104989 | MS.gene37310:CDS |
ACAACTGACAAGGTGGATTT+GGG | 0.423409 | 4.4:+88104358 | MS.gene37310:CDS |
TGCATCCAAATTCCATTCCA+TGG | 0.428872 | 4.4:+88103613 | MS.gene37310:CDS |
GTATTACCTAGATTCAATAA+TGG | 0.432211 | 4.4:-88105380 | None:intergenic |
TTGGAAGACAGATTTAAAAG+TGG | 0.432645 | 4.4:-88106533 | None:intergenic |
CTCGCTGTTGATGTTTCCAC+TGG | 0.439393 | 4.4:+88101960 | MS.gene37310:CDS |
ATGCAAGCTGTGTTGACTTA+TGG | 0.439684 | 4.4:+88103650 | MS.gene37310:CDS |
TTAGCTCTCGGAACGGAAGA+TGG | 0.440496 | 4.4:+88101930 | MS.gene37310:CDS |
CTAGACTACGAGTTATAAGT+TGG | 0.457270 | 4.4:+88103113 | MS.gene37310:CDS |
TCTTCACTGGCTTTCTCACA+TGG | 0.458648 | 4.4:+88102971 | MS.gene37310:CDS |
GGAGAATGTGGTATTAAATG+TGG | 0.458764 | 4.4:+88103721 | MS.gene37310:CDS |
ATAGCTGCATAGTCACCATT+AGG | 0.460078 | 4.4:-88100871 | None:intergenic |
TTTCCACTGGTGAGAGGAAG+TGG | 0.461504 | 4.4:+88101973 | MS.gene37310:CDS |
GGTGTGAAAGCCGTAAGAAC+AGG | 0.461677 | 4.4:-88100850 | None:intergenic |
GTTAAAGGAACCTGTTCTTA+CGG | 0.464735 | 4.4:+88100840 | MS.gene37310:CDS |
TGACAGAAATACCCGGGAAT+CGG | 0.480215 | 4.4:-88102008 | None:intergenic |
TGTCTAAGAAACTTGAGAGT+TGG | 0.481539 | 4.4:-88106552 | None:intergenic |
CTTCAGGTGGAACTTACATA+TGG | 0.486164 | 4.4:+88103468 | MS.gene37310:CDS |
TGACACTTACCATATCATTA+GGG | 0.487717 | 4.4:-88103162 | None:intergenic |
TTGGTTCTTGATTGCCACTC+CGG | 0.488851 | 4.4:+88103407 | MS.gene37310:CDS |
GCTCATTTGGATCATCATCA+AGG | 0.491997 | 4.4:-88104978 | None:intergenic |
ATTAAGTAGTTTGAGGACGT+TGG | 0.492657 | 4.4:-88105347 | None:intergenic |
ACTGAAAGCAGCAGTAGAAA+AGG | 0.494658 | 4.4:+88104282 | MS.gene37310:intron |
GTAAACATCTTCAAGTTTGG+AGG | 0.497984 | 4.4:+88103324 | MS.gene37310:CDS |
AGTAGTTTGAGGACGTTGGA+TGG | 0.498447 | 4.4:-88105343 | None:intergenic |
GATCAATGTGAGGTTGTTGA+TGG | 0.503198 | 4.4:+88104952 | MS.gene37310:intron |
GCATCCAAATTCCATTCCAT+GGG | 0.503938 | 4.4:+88103614 | MS.gene37310:CDS |
CATGACAGCCTTTCCAAGAA+AGG | 0.505596 | 4.4:+88103770 | MS.gene37310:CDS |
ATAGCGAAAGTTCAAAGAAA+AGG | 0.506147 | 4.4:+88103576 | MS.gene37310:CDS |
AGACAAAGTCGAAAGTGATA+AGG | 0.506707 | 4.4:+88103550 | MS.gene37310:CDS |
CAGCTATTCTGTCTGCAAAT+GGG | 0.511683 | 4.4:+88100887 | MS.gene37310:CDS |
AGAAGCTTACCCCGGTGTAA+AGG | 0.512950 | 4.4:-88106576 | None:intergenic |
TGAGAAAGCCAGTGAAGAGA+TGG | 0.517464 | 4.4:-88102966 | None:intergenic |
TGTACAAGCAATCCAGAAGA+AGG | 0.518949 | 4.4:-88105179 | None:intergenic |
AAGGCTGTCATGCTTCTGAA+TGG | 0.520204 | 4.4:-88103759 | None:intergenic |
GTTCCGAGAGCTAATAAGTA+AGG | 0.523266 | 4.4:-88101921 | None:intergenic |
CAAATCCACCTTGTCAGTTG+TGG | 0.523283 | 4.4:-88104356 | None:intergenic |
TCCACCTTGTCAGTTGTGGT+TGG | 0.526474 | 4.4:-88104352 | None:intergenic |
CCGGGAATCGGATGACTAGT+AGG | 0.527690 | 4.4:-88101996 | None:intergenic |
AAGTTGGGAAACTGGTAAAG+AGG | 0.528152 | 4.4:+88103129 | MS.gene37310:CDS |
TCATCATACAGTGGGATTTG+CGG | 0.532835 | 4.4:+88102827 | MS.gene37310:intron |
GGACCTTACTTATTAGCTCT+CGG | 0.532898 | 4.4:+88101918 | MS.gene37310:CDS |
CTTAAATATTAGTGATTTAG+GGG | 0.534808 | 4.4:+88103700 | MS.gene37310:CDS |
ATATCTGACCTTTCTTGGAA+AGG | 0.536348 | 4.4:-88103778 | None:intergenic |
CTACTAGTCATCCGATTCCC+GGG | 0.537747 | 4.4:+88101997 | MS.gene37310:CDS |
GCATGCCTCAAGGGTAGTGT+TGG | 0.546380 | 4.4:-88103380 | None:intergenic |
GTAGTTTGAGGACGTTGGAT+GGG | 0.548008 | 4.4:-88105342 | None:intergenic |
GTATTGCATGCAGTTTCACT+GGG | 0.549542 | 4.4:+88101645 | MS.gene37310:CDS |
AATTTGAATGCCTCTTCTGA+AGG | 0.551388 | 4.4:+88103494 | MS.gene37310:CDS |
GCAGAGTGGAAGCCATCAGA+TGG | 0.554222 | 4.4:+88101599 | MS.gene37310:CDS |
TAGTGATTTAGGGGAGAATG+TGG | 0.555475 | 4.4:+88103709 | MS.gene37310:CDS |
GAGAATGTGGTATTAAATGT+GGG | 0.555720 | 4.4:+88103722 | MS.gene37310:CDS |
AAGGTTAACTGAGATGGTGA+AGG | 0.556011 | 4.4:+88100813 | None:intergenic |
ATCCAAGAATGACACAGAGC+TGG | 0.556575 | 4.4:+88105050 | MS.gene37310:CDS |
TTCTTAGACATCCTTTACAC+CGG | 0.558696 | 4.4:+88106565 | MS.gene37310:CDS |
CTTGTACACGCAAGATGAGA+AGG | 0.561271 | 4.4:+88105194 | MS.gene37310:CDS |
ACCAATGGAGCATGCCTCAA+GGG | 0.561747 | 4.4:-88103389 | None:intergenic |
TAGACTACGAGTTATAAGTT+GGG | 0.563426 | 4.4:+88103114 | MS.gene37310:CDS |
GAGTGGCAATCAAGAACCAA+TGG | 0.567220 | 4.4:-88103404 | None:intergenic |
TGAAACAGGAGAGCTTCTAA+AGG | 0.570461 | 4.4:+88102922 | MS.gene37310:CDS |
TCTACACTATCTGCACTTGG+AGG | 0.572947 | 4.4:-88105117 | None:intergenic |
GTTCTTGATTGCCACTCCGG+TGG | 0.575186 | 4.4:+88103410 | MS.gene37310:CDS |
TTTGTGTTGTTGGACATGAT+GGG | 0.577817 | 4.4:+88102879 | MS.gene37310:CDS |
TGCAAGTGGAATAATGTCCC+AGG | 0.578119 | 4.4:+88105943 | MS.gene37310:CDS |
TAAATCATCTTCATTGCCAC+CGG | 0.579220 | 4.4:-88103426 | None:intergenic |
AACCAATGGAGCATGCCTCA+AGG | 0.585971 | 4.4:-88103390 | None:intergenic |
AGAAGTAGACATTTCAGCCA+TGG | 0.592596 | 4.4:-88105914 | None:intergenic |
ACATCTACACTATCTGCACT+TGG | 0.592728 | 4.4:-88105120 | None:intergenic |
CTACTTCTACAGCATGCAAG+TGG | 0.594965 | 4.4:+88105929 | MS.gene37310:CDS |
ATATCATGAACTCCATCTGA+TGG | 0.595193 | 4.4:-88101611 | None:intergenic |
TCTTAGACATCCTTTACACC+GGG | 0.601967 | 4.4:+88106566 | MS.gene37310:CDS |
CAGATTTGGAATACAAACAG+TGG | 0.605146 | 4.4:+88101566 | MS.gene37310:intron |
TGTTGTTGGACATGATGGGA+AGG | 0.606171 | 4.4:+88102883 | MS.gene37310:CDS |
TCTTCCAACCACAACTGACA+AGG | 0.614649 | 4.4:+88104348 | MS.gene37310:CDS |
AGGTTAACTGAGATGGTGAA+GGG | 0.617825 | 4.4:+88100814 | None:intergenic |
TCCAAATGAGCAAACAATTG+GGG | 0.618540 | 4.4:+88104990 | MS.gene37310:CDS |
TTACTTATTAGCTCTCGGAA+CGG | 0.621773 | 4.4:+88101923 | MS.gene37310:CDS |
GTGTACTTGACCTTCAGAAG+AGG | 0.628171 | 4.4:-88103504 | None:intergenic |
AGTTTAGGAACTGTGAGTGG+TGG | 0.629851 | 4.4:+88103356 | MS.gene37310:CDS |
TATTCTGTCTGCAAATGGGA+CGG | 0.630145 | 4.4:+88100891 | MS.gene37310:CDS |
TTGATGTTTCCACTGGTGAG+AGG | 0.633142 | 4.4:+88101967 | MS.gene37310:CDS |
GTGGAGATTTGTTAGCAGAG+TGG | 0.645375 | 4.4:+88101585 | MS.gene37310:CDS |
AGGCCACTTCCTCTCACCAG+TGG | 0.645921 | 4.4:-88101976 | None:intergenic |
TCCAACCACAACTGACAAGG+TGG | 0.646455 | 4.4:+88104351 | MS.gene37310:CDS |
AGCAATCCAGAAGAAGGGTG+CGG | 0.646504 | 4.4:-88105173 | None:intergenic |
GTACAAGCAATCCAGAAGAA+GGG | 0.650839 | 4.4:-88105178 | None:intergenic |
CATCTTCATTGCCACCGGAG+TGG | 0.651757 | 4.4:-88103421 | None:intergenic |
TCAGCAGTTACGTCTTCAGG+TGG | 0.656715 | 4.4:+88103455 | MS.gene37310:CDS |
CATCCAAATTCCATTCCATG+GGG | 0.678818 | 4.4:+88103615 | MS.gene37310:CDS |
ATATTTAAGACTGTAAACTG+TGG | 0.690852 | 4.4:-88103686 | None:intergenic |
TTAAGTTTAGGAACTGTGAG+TGG | 0.702462 | 4.4:+88103353 | MS.gene37310:CDS |
ATTTAATGTAGATCAATGTG+AGG | 0.722303 | 4.4:+88104942 | MS.gene37310:intron |
ATCCAAATTCCATTCCATGG+GGG | 0.733289 | 4.4:+88103616 | MS.gene37310:CDS |
GTGGTCCAACACTACCCTTG+AGG | 0.738669 | 4.4:+88103375 | MS.gene37310:CDS |
CTTAGACATCCTTTACACCG+GGG | 0.742537 | 4.4:+88106567 | MS.gene37310:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAACATTCAAAAAATAAAT+TGG | - | chr4.4:88104885-88104904 | None:intergenic | 10.0% |
!!! | ATTTTTTGAATGTTAATTAT+TGG | + | chr4.4:88104889-88104908 | MS.gene37310:intron | 10.0% |
!! | AAGAACAACAAATTATATAA+CGG | - | chr4.4:88102794-88102813 | None:intergenic | 15.0% |
!! | ATAAAACATGAAATTCTATT+TGG | + | chr4.4:88104154-88104173 | MS.gene37310:intron | 15.0% |
!! | ATGTATAAATAAGAGAAATA+AGG | + | chr4.4:88103975-88103994 | MS.gene37310:intron | 15.0% |
!! | CTATTAAGAATAAAAGAAAA+AGG | + | chr4.4:88104629-88104648 | MS.gene37310:intron | 15.0% |
!! | TCTTAAATATTAGTGATTTA+GGG | + | chr4.4:88103699-88103718 | MS.gene37310:CDS | 15.0% |
!! | TGAAATTAAAAATCTAGAAA+TGG | - | chr4.4:88105499-88105518 | None:intergenic | 15.0% |
!! | TGTATAAATAAGAGAAATAA+GGG | + | chr4.4:88103976-88103995 | MS.gene37310:intron | 15.0% |
!! | TTTATTAAATATACAATGCA+TGG | - | chr4.4:88102162-88102181 | None:intergenic | 15.0% |
!!! | AATCGATACATTTTTAAATA+TGG | - | chr4.4:88102688-88102707 | None:intergenic | 15.0% |
!!! | AATTTTTGTATACTTCATAT+TGG | + | chr4.4:88102614-88102633 | MS.gene37310:intron | 15.0% |
!!! | ATAATTATGATACTTGTTAA+AGG | - | chr4.4:88105776-88105795 | None:intergenic | 15.0% |
!!! | ATCGATACATTTTTAAATAT+GGG | - | chr4.4:88102687-88102706 | None:intergenic | 15.0% |
!!! | GTTATAAATCTACAATTTTT+GGG | + | chr4.4:88106218-88106237 | MS.gene37310:intron | 15.0% |
!!! | TAATATTTTAAATTGTTTGC+TGG | + | chr4.4:88104390-88104409 | MS.gene37310:intron | 15.0% |
!!! | TAATTATGATACTTGTTAAA+GGG | - | chr4.4:88105775-88105794 | None:intergenic | 15.0% |
!!! | TGTTATAAATCTACAATTTT+TGG | + | chr4.4:88106217-88106236 | MS.gene37310:intron | 15.0% |
!!! | TGTTTTTTTAATGCTTTAAA+AGG | + | chr4.4:88101828-88101847 | MS.gene37310:intron | 15.0% |
!! | AAAAGAAAAATTCATTGTGA+AGG | + | chr4.4:88104037-88104056 | MS.gene37310:intron | 20.0% |
!! | AAAAGAAAGAGAAAATAACT+TGG | - | chr4.4:88105803-88105822 | None:intergenic | 20.0% |
!! | AAAGAAAAATTCATTGTGAA+GGG | + | chr4.4:88104038-88104057 | MS.gene37310:intron | 20.0% |
!! | AGATATGAAATGCATATAAT+TGG | - | chr4.4:88106078-88106097 | None:intergenic | 20.0% |
!! | AGGATTATTAACAGAAAAAA+TGG | + | chr4.4:88105679-88105698 | MS.gene37310:intron | 20.0% |
!! | ATAATTGTTAACTCTTACTT+TGG | + | chr4.4:88101030-88101049 | MS.gene37310:intron | 20.0% |
!! | ATGTAACAAGATTAATTGTT+AGG | - | chr4.4:88103031-88103050 | None:intergenic | 20.0% |
!! | ATTCAAAAAATAAATTGGAG+TGG | - | chr4.4:88104880-88104899 | None:intergenic | 20.0% |
!! | CTTAAATATTAGTGATTTAG+GGG | + | chr4.4:88103700-88103719 | MS.gene37310:CDS | 20.0% |
!! | GCAAATATTAAATTTGTCAT+TGG | + | chr4.4:88102263-88102282 | MS.gene37310:intron | 20.0% |
!! | GCACAATAAATAGATAAAAA+AGG | - | chr4.4:88106492-88106511 | None:intergenic | 20.0% |
!! | GTCTTAAATATTAGTGATTT+AGG | + | chr4.4:88103698-88103717 | MS.gene37310:CDS | 20.0% |
!! | GTTAATTATAACCATTTGTT+TGG | - | chr4.4:88105752-88105771 | None:intergenic | 20.0% |
!! | TAACAATTAATCTTGTTACA+TGG | + | chr4.4:88103030-88103049 | MS.gene37310:intron | 20.0% |
!! | TGAAACTGGTAATAATATTA+AGG | - | chr4.4:88102712-88102731 | None:intergenic | 20.0% |
!! | TTATATCCATTATTGAATCT+AGG | + | chr4.4:88105374-88105393 | MS.gene37310:CDS | 20.0% |
!!! | AATAAGATTTTGTTGGATAT+TGG | + | chr4.4:88101478-88101497 | MS.gene37310:intron | 20.0% |
!!! | AATAGTTTTACTTTGTTCAA+TGG | - | chr4.4:88102104-88102123 | None:intergenic | 20.0% |
!!! | AATGTCACAATTTTTTTAGT+TGG | + | chr4.4:88104182-88104201 | MS.gene37310:intron | 20.0% |
!!! | AATTAAATATTTTGCATCAC+TGG | - | chr4.4:88103288-88103307 | None:intergenic | 20.0% |
!!! | AATTATGATACTTGTTAAAG+GGG | - | chr4.4:88105774-88105793 | None:intergenic | 20.0% |
!!! | AATTGGTAATTTAAAAGACA+TGG | - | chr4.4:88106061-88106080 | None:intergenic | 20.0% |
!!! | ATACATTTTTAAATATGGGA+TGG | - | chr4.4:88102683-88102702 | None:intergenic | 20.0% |
!!! | ATAGCTAAATATTTTTCATC+TGG | - | chr4.4:88103085-88103104 | None:intergenic | 20.0% |
!!! | ATATGTTCTTTTCAAAATTC+AGG | - | chr4.4:88104536-88104555 | None:intergenic | 20.0% |
!!! | ATGTCACAATTTTTTTAGTT+GGG | + | chr4.4:88104183-88104202 | MS.gene37310:intron | 20.0% |
!!! | ATTGGTAATTTAAAAGACAT+GGG | - | chr4.4:88106060-88106079 | None:intergenic | 20.0% |
!!! | ATTGGTTCACATTTTATATT+TGG | - | chr4.4:88102334-88102353 | None:intergenic | 20.0% |
!!! | TACATTTTTAAATATGGGAT+GGG | - | chr4.4:88102682-88102701 | None:intergenic | 20.0% |
!!! | TGCACTATTATTTTTTTGAA+TGG | + | chr4.4:88104829-88104848 | MS.gene37310:intron | 20.0% |
!!! | TTAGCTTTAATAAGACAATT+TGG | + | chr4.4:88104723-88104742 | MS.gene37310:intron | 20.0% |
!!! | TTATTTTCTCTTTCTTTTAC+AGG | + | chr4.4:88105805-88105824 | MS.gene37310:intron | 20.0% |
!!! | TTGTTGATATGTTCATTTTT+AGG | + | chr4.4:88103938-88103957 | MS.gene37310:intron | 20.0% |
!!! | TTTTCAAGGTTATTTTAGTT+CGG | - | chr4.4:88103529-88103548 | None:intergenic | 20.0% |
!!! | TTTTCGTTAAAAGACAAAAT+TGG | - | chr4.4:88101199-88101218 | None:intergenic | 20.0% |
!!! | TTTTCTGTTAATAATCCTAA+AGG | - | chr4.4:88105677-88105696 | None:intergenic | 20.0% |
! | AAACATTGCTTCATTTCATA+GGG | - | chr4.4:88102408-88102427 | None:intergenic | 25.0% |
! | AACAAGATTAATTGTTAGGA+TGG | - | chr4.4:88103027-88103046 | None:intergenic | 25.0% |
! | AACAGTAATCTCAATTTCAA+TGG | - | chr4.4:88104492-88104511 | None:intergenic | 25.0% |
! | AAGAAAAATTCATTGTGAAG+GGG | + | chr4.4:88104039-88104058 | MS.gene37310:intron | 25.0% |
! | AAGATAAATCAACATGCAAA+TGG | - | chr4.4:88104766-88104785 | None:intergenic | 25.0% |
! | AATTAGCGTAAAAAAGGTAA+GGG | + | chr4.4:88101897-88101916 | MS.gene37310:intron | 25.0% |
! | ACAGTAATCTCAATTTCAAT+GGG | - | chr4.4:88104491-88104510 | None:intergenic | 25.0% |
! | AGAAATAAGGGTAGAAAAAT+GGG | + | chr4.4:88103988-88104007 | MS.gene37310:intron | 25.0% |
! | ATGATATGATGAATATACCT+TGG | - | chr4.4:88101744-88101763 | None:intergenic | 25.0% |
! | ATTTAATGTAGATCAATGTG+AGG | + | chr4.4:88104942-88104961 | MS.gene37310:intron | 25.0% |
! | CAAAAAAATAATAGTGCAGA+TGG | - | chr4.4:88104827-88104846 | None:intergenic | 25.0% |
! | CAATGTTTAATAAAATGCAC+TGG | + | chr4.4:88102420-88102439 | MS.gene37310:intron | 25.0% |
! | GATTCAATTGTTCAACAAAT+TGG | + | chr4.4:88106369-88106388 | MS.gene37310:intron | 25.0% |
! | GCAAAGCATAAATACATTAA+TGG | - | chr4.4:88104560-88104579 | None:intergenic | 25.0% |
! | GTATTACCTAGATTCAATAA+TGG | - | chr4.4:88105383-88105402 | None:intergenic | 25.0% |
! | TAAACATTGCTTCATTTCAT+AGG | - | chr4.4:88102409-88102428 | None:intergenic | 25.0% |
! | TAAGAGAATTAAGTAGTTTG+AGG | - | chr4.4:88105357-88105376 | None:intergenic | 25.0% |
! | TAATTAGCGTAAAAAAGGTA+AGG | + | chr4.4:88101896-88101915 | MS.gene37310:intron | 25.0% |
! | TGATATGATGAATATACCTT+GGG | - | chr4.4:88101743-88101762 | None:intergenic | 25.0% |
! | TGTTGTAATTAGCGTAAAAA+AGG | + | chr4.4:88101891-88101910 | MS.gene37310:intron | 25.0% |
! | TTTCTTTCTTTCTCATTCTA+GGG | + | chr4.4:88105868-88105887 | MS.gene37310:intron | 25.0% |
!! | AAAGTAAACATCTTCAAGTT+TGG | + | chr4.4:88103321-88103340 | MS.gene37310:CDS | 25.0% |
!! | AAGTATACTACAAACTTTTG+AGG | - | chr4.4:88106406-88106425 | None:intergenic | 25.0% |
!! | ATAAGTGTCTTGTCTAATTT+TGG | + | chr4.4:88100991-88101010 | MS.gene37310:intron | 25.0% |
!! | ATATTTAAGACTGTAAACTG+TGG | - | chr4.4:88103689-88103708 | None:intergenic | 25.0% |
!! | TGTTGCAAATAAGATTTTGT+TGG | + | chr4.4:88101471-88101490 | MS.gene37310:intron | 25.0% |
!! | TTTCCATATAGTTTTTGCTA+AGG | + | chr4.4:88104668-88104687 | MS.gene37310:intron | 25.0% |
!! | TTTTCTTTCTTTCTCATTCT+AGG | + | chr4.4:88105867-88105886 | MS.gene37310:intron | 25.0% |
!!! | AAACTTTTAAAGAAGATTCC+TGG | - | chr4.4:88105964-88105983 | None:intergenic | 25.0% |
!!! | AACTTTTAAAGAAGATTCCT+GGG | - | chr4.4:88105963-88105982 | None:intergenic | 25.0% |
!!! | AATTATTGGTGAAGTATTGA+TGG | + | chr4.4:88104903-88104922 | MS.gene37310:intron | 25.0% |
!!! | ATCTACAATTTTTGGGTAAT+TGG | + | chr4.4:88106225-88106244 | MS.gene37310:intron | 25.0% |
!!! | ATGTTCATTTTTAGGATAGA+CGG | + | chr4.4:88103946-88103965 | MS.gene37310:intron | 25.0% |
!!! | CATCTTCTATTTTTCAGATT+TGG | + | chr4.4:88101552-88101571 | MS.gene37310:intron | 25.0% |
!!! | CTAAATTACTTTTGGATCTT+TGG | + | chr4.4:88103000-88103019 | MS.gene37310:intron | 25.0% |
!!! | GAATTTGTTGGTCAAAATTT+TGG | + | chr4.4:88105650-88105669 | MS.gene37310:intron | 25.0% |
!!! | TATGAGTTTAATTCTGAAAC+AGG | + | chr4.4:88102908-88102927 | MS.gene37310:CDS | 25.0% |
!!! | TGAAGTATTGATGGTATTTT+TGG | + | chr4.4:88104912-88104931 | MS.gene37310:intron | 25.0% |
!!! | TGACATCATTTTAGTTGAAT+AGG | - | chr4.4:88101380-88101399 | None:intergenic | 25.0% |
!!! | TTTACTTTTATGCCTTAACA+GGG | + | chr4.4:88103239-88103258 | MS.gene37310:intron | 25.0% |
!!! | TTTTACTTTTATGCCTTAAC+AGG | + | chr4.4:88103238-88103257 | MS.gene37310:intron | 25.0% |
AAAAAGATTTGTAGAGTGAC+GGG | - | chr4.4:88101342-88101361 | None:intergenic | 30.0% | |
AAAAGGCAAGAATTACTAGT+TGG | - | chr4.4:88106475-88106494 | None:intergenic | 30.0% | |
AAACTGCTTCCTTGAATTTA+CGG | + | chr4.4:88101290-88101309 | MS.gene37310:intron | 30.0% | |
AAAGCAGCATAATCAACATA+TGG | - | chr4.4:88102745-88102764 | None:intergenic | 30.0% | |
AAGTAAGTTAAATGCTCCAT+GGG | - | chr4.4:88105454-88105473 | None:intergenic | 30.0% | |
ACACCTTAGCAAAAACTATA+TGG | - | chr4.4:88104674-88104693 | None:intergenic | 30.0% | |
ACATTAGAAATACTGCACAT+TGG | + | chr4.4:88102576-88102595 | MS.gene37310:intron | 30.0% | |
ACTGACTAATCTCAATTTAC+TGG | + | chr4.4:88105017-88105036 | MS.gene37310:CDS | 30.0% | |
AGATATTTACCTCTTCAGAA+GGG | + | chr4.4:88101798-88101817 | MS.gene37310:intron | 30.0% | |
AGTTCATAATAACCTGCAAA+AGG | - | chr4.4:88105306-88105325 | None:intergenic | 30.0% | |
ATAAAATGTGAACCAATGTC+TGG | + | chr4.4:88102337-88102356 | MS.gene37310:intron | 30.0% | |
ATACAATGCATGGAGATTAA+AGG | - | chr4.4:88102152-88102171 | None:intergenic | 30.0% | |
ATAGCGAAAGTTCAAAGAAA+AGG | + | chr4.4:88103576-88103595 | MS.gene37310:CDS | 30.0% | |
ATATGATGAATATACCTTGG+GGG | - | chr4.4:88101741-88101760 | None:intergenic | 30.0% | |
ATCCAAATGAGCAAACAATT+GGG | + | chr4.4:88104989-88105008 | MS.gene37310:CDS | 30.0% | |
ATCCATATATCATCATACAG+TGG | + | chr4.4:88102818-88102837 | MS.gene37310:intron | 30.0% | |
ATGAAAATAGTGTGTTGCAA+TGG | - | chr4.4:88106312-88106331 | None:intergenic | 30.0% | |
ATGACACTTACCATATCATT+AGG | - | chr4.4:88103166-88103185 | None:intergenic | 30.0% | |
ATGGAATTTGGATGCAATAA+AGG | - | chr4.4:88103609-88103628 | None:intergenic | 30.0% | |
ATTCAAATGACAGAAATACC+CGG | - | chr4.4:88102018-88102037 | None:intergenic | 30.0% | |
ATTTCAGAACCGTAAATTCA+AGG | - | chr4.4:88101302-88101321 | None:intergenic | 30.0% | |
CTAAATGGAACCAAAAATGA+GGG | - | chr4.4:88103832-88103851 | None:intergenic | 30.0% | |
GAAAAAGATTTGTAGAGTGA+CGG | - | chr4.4:88101343-88101362 | None:intergenic | 30.0% | |
GAATAGGATCTCTACTTTAA+GGG | - | chr4.4:88104068-88104087 | None:intergenic | 30.0% | |
GACACTTATCCTAACATAAA+TGG | - | chr4.4:88100980-88100999 | None:intergenic | 30.0% | |
GAGAAATAAGGGTAGAAAAA+TGG | + | chr4.4:88103987-88104006 | MS.gene37310:intron | 30.0% | |
GAGAATGTGGTATTAAATGT+GGG | + | chr4.4:88103722-88103741 | MS.gene37310:CDS | 30.0% | |
GATATGATGAATATACCTTG+GGG | - | chr4.4:88101742-88101761 | None:intergenic | 30.0% | |
GGACTTTCATTTGCAAAAAA+AGG | + | chr4.4:88102848-88102867 | MS.gene37310:CDS | 30.0% | |
GTTCCATTTAGGTGATTATT+AGG | + | chr4.4:88103841-88103860 | MS.gene37310:intron | 30.0% | |
GTTGCTTAACAAATATTGCA+AGG | + | chr4.4:88101221-88101240 | MS.gene37310:intron | 30.0% | |
TAAAATGTGAACCAATGTCT+GGG | + | chr4.4:88102338-88102357 | MS.gene37310:intron | 30.0% | |
TAAACTTCTCGATAAACACT+TGG | - | chr4.4:88101267-88101286 | None:intergenic | 30.0% | |
TACAATGCATGGAGATTAAA+GGG | - | chr4.4:88102151-88102170 | None:intergenic | 30.0% | |
TAGACTACGAGTTATAAGTT+GGG | + | chr4.4:88103114-88103133 | MS.gene37310:CDS | 30.0% | |
TAGATATTTACCTCTTCAGA+AGG | + | chr4.4:88101797-88101816 | MS.gene37310:intron | 30.0% | |
TCACCTAATAATCACCTAAA+TGG | - | chr4.4:88103847-88103866 | None:intergenic | 30.0% | |
TCCATATATCATCATACAGT+GGG | + | chr4.4:88102819-88102838 | MS.gene37310:intron | 30.0% | |
TGAATAGGATCTCTACTTTA+AGG | - | chr4.4:88104069-88104088 | None:intergenic | 30.0% | |
TGACACTTACCATATCATTA+GGG | - | chr4.4:88103165-88103184 | None:intergenic | 30.0% | |
TTAATTGACCTTGGTTATCT+TGG | + | chr4.4:88102211-88102230 | MS.gene37310:intron | 30.0% | |
TTAGTATATCTGACCTTTCT+TGG | - | chr4.4:88103786-88103805 | None:intergenic | 30.0% | |
TTCTTTCTTTCTCATTCTAG+GGG | + | chr4.4:88105869-88105888 | MS.gene37310:intron | 30.0% | |
TTGGAAGACAGATTTAAAAG+TGG | - | chr4.4:88106536-88106555 | None:intergenic | 30.0% | |
TTGGTCTGAAAAAATCTCAT+GGG | + | chr4.4:88102303-88102322 | MS.gene37310:intron | 30.0% | |
TTTCATGAGCCATTTATGTT+AGG | + | chr4.4:88100968-88100987 | MS.gene37310:intron | 30.0% | |
! | AGACCAACTATAAGTCTTTT+GGG | - | chr4.4:88102290-88102309 | None:intergenic | 30.0% |
! | GGTGTGTACTAAATTACTTT+TGG | + | chr4.4:88102992-88103011 | MS.gene37310:intron | 30.0% |
! | GTAAGTGTCATTACTTATTG+TGG | + | chr4.4:88103175-88103194 | MS.gene37310:intron | 30.0% |
! | GTTAGGTTATCTTTGTGTTT+TGG | + | chr4.4:88104441-88104460 | MS.gene37310:intron | 30.0% |
! | TAAAGCTAATCATGAGTTGA+AGG | - | chr4.4:88104712-88104731 | None:intergenic | 30.0% |
! | TACAATGCTTTTCTTAAGCA+CGG | - | chr4.4:88106106-88106125 | None:intergenic | 30.0% |
! | TCATTCAAATGAGTGCTTTT+TGG | + | chr4.4:88102123-88102142 | MS.gene37310:intron | 30.0% |
! | TTTTCTTACACCCTCATTTT+TGG | + | chr4.4:88103819-88103838 | MS.gene37310:intron | 30.0% |
!! | AATTTTGACCAACAAATTCC+TGG | - | chr4.4:88105649-88105668 | None:intergenic | 30.0% |
!! | GAACTCACGATAGTTATTTT+AGG | + | chr4.4:88104593-88104612 | MS.gene37310:intron | 30.0% |
!! | GATTACTGTTTTATTGACAG+CGG | + | chr4.4:88104502-88104521 | MS.gene37310:intron | 30.0% |
!! | GTAAAAGTGTTAATTGACCT+TGG | + | chr4.4:88102202-88102221 | MS.gene37310:intron | 30.0% |
!!! | TGTTCATTTTTAGGATAGAC+GGG | + | chr4.4:88103947-88103966 | MS.gene37310:intron | 30.0% |
AAAAAAGTCCATCTCTTCAC+TGG | + | chr4.4:88102958-88102977 | MS.gene37310:CDS | 35.0% | |
AAATAAATTGGAGTGGAGTG+AGG | - | chr4.4:88104873-88104892 | None:intergenic | 35.0% | |
AAGTTTCTCCAAGATAACCA+AGG | - | chr4.4:88102222-88102241 | None:intergenic | 35.0% | |
AATTTGAATGCCTCTTCTGA+AGG | + | chr4.4:88103494-88103513 | MS.gene37310:CDS | 35.0% | |
ACCAAACATCAAATGCAGAA+AGG | - | chr4.4:88100942-88100961 | None:intergenic | 35.0% | |
AGACAAAGTCGAAAGTGATA+AGG | + | chr4.4:88103550-88103569 | MS.gene37310:CDS | 35.0% | |
AGATAAGTGATCGAGAAAGT+GGG | - | chr4.4:88105272-88105291 | None:intergenic | 35.0% | |
AGTCTATGTAATTGTGAACG+AGG | + | chr4.4:88102536-88102555 | MS.gene37310:intron | 35.0% | |
AGTGTATGAAACCGAAGAAA+GGG | - | chr4.4:88102503-88102522 | None:intergenic | 35.0% | |
ATAAACACAGTTCAGTACAC+AGG | - | chr4.4:88105232-88105251 | None:intergenic | 35.0% | |
ATACTTGACATGCTTGTGAA+AGG | + | chr4.4:88106420-88106439 | MS.gene37310:intron | 35.0% | |
ATAGGGTAGGGAAAATTCTT+AGG | - | chr4.4:88102391-88102410 | None:intergenic | 35.0% | |
ATATCATGAACTCCATCTGA+TGG | - | chr4.4:88101614-88101633 | None:intergenic | 35.0% | |
ATATCTGACCTTTCTTGGAA+AGG | - | chr4.4:88103781-88103800 | None:intergenic | 35.0% | |
ATGCAAATTGATCGTTGGAT+TGG | - | chr4.4:88101448-88101467 | None:intergenic | 35.0% | |
ATTAAGTAGTTTGAGGACGT+TGG | - | chr4.4:88105350-88105369 | None:intergenic | 35.0% | |
ATTGCTTCATTTCATAGGGT+AGG | - | chr4.4:88102404-88102423 | None:intergenic | 35.0% | |
ATTTATGCCAACCCTTTCTT+CGG | + | chr4.4:88102489-88102508 | MS.gene37310:intron | 35.0% | |
CAAACTTTCTCCATCATCTT+TGG | + | chr4.4:88104419-88104438 | MS.gene37310:intron | 35.0% | |
CAACAATGCAAATTGATCGT+TGG | - | chr4.4:88101453-88101472 | None:intergenic | 35.0% | |
CAAGTAAGTTAAATGCTCCA+TGG | - | chr4.4:88105455-88105474 | None:intergenic | 35.0% | |
CCAAACATCAAATGCAGAAA+GGG | - | chr4.4:88100941-88100960 | None:intergenic | 35.0% | |
CCTAAATGGAACCAAAAATG+AGG | - | chr4.4:88103833-88103852 | None:intergenic | 35.0% | |
CGATGTATATTTCCCTGTTA+AGG | - | chr4.4:88103254-88103273 | None:intergenic | 35.0% | |
CTAGACTACGAGTTATAAGT+TGG | + | chr4.4:88103113-88103132 | MS.gene37310:CDS | 35.0% | |
GAGCAAAAGACCAAGAAAAT+GGG | - | chr4.4:88104469-88104488 | None:intergenic | 35.0% | |
GATAACCTAACCAAAGATGA+TGG | - | chr4.4:88104432-88104451 | None:intergenic | 35.0% | |
GATCCAAATGAGCAAACAAT+TGG | + | chr4.4:88104988-88105007 | MS.gene37310:CDS | 35.0% | |
GATTACTCATCATACCAAAG+TGG | - | chr4.4:88104801-88104820 | None:intergenic | 35.0% | |
GCTTTCTCTACGAAAATCAA+TGG | - | chr4.4:88105592-88105611 | None:intergenic | 35.0% | |
GGAGAATGTGGTATTAAATG+TGG | + | chr4.4:88103721-88103740 | MS.gene37310:CDS | 35.0% | |
GTAAATTCAAGGAAGCAGTT+TGG | - | chr4.4:88101291-88101310 | None:intergenic | 35.0% | |
GTCTATGTAATTGTGAACGA+GGG | + | chr4.4:88102537-88102556 | MS.gene37310:intron | 35.0% | |
GTGAATGCATGATTGTGAAT+AGG | - | chr4.4:88104084-88104103 | None:intergenic | 35.0% | |
GTTAAAGGAACCTGTTCTTA+CGG | + | chr4.4:88100840-88100859 | MS.gene37310:CDS | 35.0% | |
TAAATCATCTTCATTGCCAC+CGG | - | chr4.4:88103429-88103448 | None:intergenic | 35.0% | |
TACTTTCTCCATTGTGTTGT+GGG | + | chr4.4:88101860-88101879 | MS.gene37310:intron | 35.0% | |
TAGGGAAAATTCTTAGGCAA+TGG | - | chr4.4:88102385-88102404 | None:intergenic | 35.0% | |
TCCAAATGAGCAAACAATTG+GGG | + | chr4.4:88104990-88105009 | MS.gene37310:CDS | 35.0% | |
TCCCACTGTATGATGATATA+TGG | - | chr4.4:88102823-88102842 | None:intergenic | 35.0% | |
TCTGAAAAAATCTCATGGGT+GGG | + | chr4.4:88102307-88102326 | MS.gene37310:intron | 35.0% | |
TGCTACAATACAGTATGACA+AGG | + | chr4.4:88106281-88106300 | MS.gene37310:intron | 35.0% | |
TGTCTAAGAAACTTGAGAGT+TGG | - | chr4.4:88106555-88106574 | None:intergenic | 35.0% | |
TTAAGTTTAGGAACTGTGAG+TGG | + | chr4.4:88103353-88103372 | MS.gene37310:CDS | 35.0% | |
TTACTTTCTCCATTGTGTTG+TGG | + | chr4.4:88101859-88101878 | MS.gene37310:intron | 35.0% | |
TTCAAATGACAGAAATACCC+GGG | - | chr4.4:88102017-88102036 | None:intergenic | 35.0% | |
TTCTTAGACATCCTTTACAC+CGG | + | chr4.4:88106565-88106584 | MS.gene37310:CDS | 35.0% | |
TTGAAAAACAACTCCCACTA+GGG | - | chr4.4:88103909-88103928 | None:intergenic | 35.0% | |
TTGCTTCATTTCATAGGGTA+GGG | - | chr4.4:88102403-88102422 | None:intergenic | 35.0% | |
TTTAGCAGCAACCAAACAAA+TGG | + | chr4.4:88105738-88105757 | MS.gene37310:intron | 35.0% | |
TTTCTCCATCATCTTTGGTT+AGG | + | chr4.4:88104424-88104443 | MS.gene37310:intron | 35.0% | |
! | AGTTTTCCATCTTGCTTGTA+AGG | + | chr4.4:88105526-88105545 | MS.gene37310:intron | 35.0% |
! | CAGACCAACTATAAGTCTTT+TGG | - | chr4.4:88102291-88102310 | None:intergenic | 35.0% |
! | CAGATTTGGAATACAAACAG+TGG | + | chr4.4:88101566-88101585 | MS.gene37310:intron | 35.0% |
! | CATGGAGCATTTAACTTACT+TGG | + | chr4.4:88105453-88105472 | MS.gene37310:intron | 35.0% |
! | GGGTAATTGGTAGTTATCTT+AGG | + | chr4.4:88106238-88106257 | MS.gene37310:intron | 35.0% |
! | GTAAACATCTTCAAGTTTGG+AGG | + | chr4.4:88103324-88103343 | MS.gene37310:CDS | 35.0% |
! | GTTGGTCTGAAAAAATCTCA+TGG | + | chr4.4:88102302-88102321 | MS.gene37310:intron | 35.0% |
! | GTTTTCCATCTTGCTTGTAA+GGG | + | chr4.4:88105527-88105546 | MS.gene37310:intron | 35.0% |
! | TTACTTATTAGCTCTCGGAA+CGG | + | chr4.4:88101923-88101942 | MS.gene37310:CDS | 35.0% |
! | TTCGACTTTGTCTGTTTTCA+AGG | - | chr4.4:88103543-88103562 | None:intergenic | 35.0% |
! | TTTGTGTTGTTGGACATGAT+GGG | + | chr4.4:88102879-88102898 | MS.gene37310:CDS | 35.0% |
!! | GGTCAAAATTTTGGTCCTTT+AGG | + | chr4.4:88105659-88105678 | MS.gene37310:intron | 35.0% |
!! | TGTTTTGGATCCCATTTTCT+TGG | + | chr4.4:88104456-88104475 | MS.gene37310:intron | 35.0% |
!!! | CCTCATTTTTGGTTCCATTT+AGG | + | chr4.4:88103830-88103849 | MS.gene37310:intron | 35.0% |
AAATGCAGAAAGGGAGATGA+AGG | - | chr4.4:88100932-88100951 | None:intergenic | 40.0% | |
AAGTTGGGAAACTGGTAAAG+AGG | + | chr4.4:88103129-88103148 | MS.gene37310:CDS | 40.0% | |
ACTGAAAGCAGCAGTAGAAA+AGG | + | chr4.4:88104282-88104301 | MS.gene37310:intron | 40.0% | |
AGAAGTAGACATTTCAGCCA+TGG | - | chr4.4:88105917-88105936 | None:intergenic | 40.0% | |
ATAGCTGCATAGTCACCATT+AGG | - | chr4.4:88100874-88100893 | None:intergenic | 40.0% | |
ATCCAAATTCCATTCCATGG+GGG | + | chr4.4:88103616-88103635 | MS.gene37310:CDS | 40.0% | |
ATGCAGTTTCACTGGGATAA+AGG | + | chr4.4:88101652-88101671 | MS.gene37310:CDS | 40.0% | |
CAGATAAGTGATCGAGAAAG+TGG | - | chr4.4:88105273-88105292 | None:intergenic | 40.0% | |
CAGCTATTCTGTCTGCAAAT+GGG | + | chr4.4:88100887-88100906 | MS.gene37310:CDS | 40.0% | |
CAGTGTATGAAACCGAAGAA+AGG | - | chr4.4:88102504-88102523 | None:intergenic | 40.0% | |
CATCCAAATTCCATTCCATG+GGG | + | chr4.4:88103615-88103634 | MS.gene37310:CDS | 40.0% | |
CCCTTTCTGCATTTGATGTT+TGG | + | chr4.4:88100938-88100957 | MS.gene37310:intron | 40.0% | |
CTTCAGGTGGAACTTACATA+TGG | + | chr4.4:88103468-88103487 | MS.gene37310:CDS | 40.0% | |
CTTTCTTCGGTTTCATACAC+TGG | + | chr4.4:88102502-88102521 | MS.gene37310:intron | 40.0% | |
GATCAATGTGAGGTTGTTGA+TGG | + | chr4.4:88104952-88104971 | MS.gene37310:intron | 40.0% | |
GCATCCAAATTCCATTCCAT+GGG | + | chr4.4:88103614-88103633 | MS.gene37310:CDS | 40.0% | |
GCTCATTTGGATCATCATCA+AGG | - | chr4.4:88104981-88105000 | None:intergenic | 40.0% | |
GGACCCAAAAGACTTATAGT+TGG | + | chr4.4:88102284-88102303 | MS.gene37310:intron | 40.0% | |
GGAGAAACTTGAGCATTCTT+TGG | + | chr4.4:88102232-88102251 | MS.gene37310:intron | 40.0% | |
GGAGCAAAAGACCAAGAAAA+TGG | - | chr4.4:88104470-88104489 | None:intergenic | 40.0% | |
GGCAAGAATTACTAGTTGGT+TGG | - | chr4.4:88106471-88106490 | None:intergenic | 40.0% | |
GTACAAGCAATCCAGAAGAA+GGG | - | chr4.4:88105181-88105200 | None:intergenic | 40.0% | |
GTATTGCATGCAGTTTCACT+GGG | + | chr4.4:88101645-88101664 | MS.gene37310:CDS | 40.0% | |
GTCTGAAAAAATCTCATGGG+TGG | + | chr4.4:88102306-88102325 | MS.gene37310:intron | 40.0% | |
GTTAACAGCCAGGAATTTGT+TGG | + | chr4.4:88105638-88105657 | MS.gene37310:intron | 40.0% | |
GTTCCGAGAGCTAATAAGTA+AGG | - | chr4.4:88101924-88101943 | None:intergenic | 40.0% | |
GTTGAAAAACAACTCCCACT+AGG | - | chr4.4:88103910-88103929 | None:intergenic | 40.0% | |
TAATTTCATCAAAGCCCCCA+AGG | + | chr4.4:88101724-88101743 | MS.gene37310:intron | 40.0% | |
TAGTGATTTAGGGGAGAATG+TGG | + | chr4.4:88103709-88103728 | MS.gene37310:CDS | 40.0% | |
TATGAAACCGAAGAAAGGGT+TGG | - | chr4.4:88102499-88102518 | None:intergenic | 40.0% | |
TATTCTGTCTGCAAATGGGA+CGG | + | chr4.4:88100891-88100910 | MS.gene37310:CDS | 40.0% | |
TCATCATACAGTGGGATTTG+CGG | + | chr4.4:88102827-88102846 | MS.gene37310:intron | 40.0% | |
TCCCCAATTGTTTGCTCATT+TGG | - | chr4.4:88104994-88105013 | None:intergenic | 40.0% | |
TCTTAGACATCCTTTACACC+GGG | + | chr4.4:88106566-88106585 | MS.gene37310:CDS | 40.0% | |
TGAAACAGGAGAGCTTCTAA+AGG | + | chr4.4:88102922-88102941 | MS.gene37310:CDS | 40.0% | |
TGCATCCAAATTCCATTCCA+TGG | + | chr4.4:88103613-88103632 | MS.gene37310:CDS | 40.0% | |
TGTACAAGCAATCCAGAAGA+AGG | - | chr4.4:88105182-88105201 | None:intergenic | 40.0% | |
TGTATTGCATGCAGTTTCAC+TGG | + | chr4.4:88101644-88101663 | MS.gene37310:CDS | 40.0% | |
TTCAAATGTGCGTACCACTT+TGG | + | chr4.4:88104784-88104803 | MS.gene37310:intron | 40.0% | |
TTCAAGTGAGTTCTGCATGA+TGG | + | chr4.4:88105996-88106015 | MS.gene37310:intron | 40.0% | |
! | AAATACTTTTCCTGCCCTAG+TGG | + | chr4.4:88103892-88103911 | MS.gene37310:intron | 40.0% |
! | AACTTGCTCTTTGTCACTCT+TGG | - | chr4.4:88105088-88105107 | None:intergenic | 40.0% |
! | AATACTTTTCCTGCCCTAGT+GGG | + | chr4.4:88103893-88103912 | MS.gene37310:intron | 40.0% |
! | ACAACTGACAAGGTGGATTT+GGG | + | chr4.4:88104358-88104377 | MS.gene37310:CDS | 40.0% |
! | CGAGTTATAAGTTGGGAAAC+TGG | + | chr4.4:88103121-88103140 | MS.gene37310:CDS | 40.0% |
! | CTTTGTGTTGTTGGACATGA+TGG | + | chr4.4:88102878-88102897 | MS.gene37310:CDS | 40.0% |
! | GGACCTTACTTATTAGCTCT+CGG | + | chr4.4:88101918-88101937 | MS.gene37310:CDS | 40.0% |
! | TCTGAAGTGCCCTAATGATA+TGG | + | chr4.4:88103153-88103172 | MS.gene37310:CDS | 40.0% |
! | TGGAGGTGTGACTTAAGTTT+AGG | + | chr4.4:88103341-88103360 | MS.gene37310:CDS | 40.0% |
!! | ATGCAAGCTGTGTTGACTTA+TGG | + | chr4.4:88103650-88103669 | MS.gene37310:CDS | 40.0% |
!! | TCATTCTAGGGGTGCAATTT+TGG | + | chr4.4:88105880-88105899 | MS.gene37310:intron | 40.0% |
!! | TCTTATTTCTGTCTGTCGCT+TGG | + | chr4.4:88104258-88104277 | MS.gene37310:intron | 40.0% |
AAGGCTGTCATGCTTCTGAA+TGG | - | chr4.4:88103762-88103781 | None:intergenic | 45.0% | |
AGTAGTTTGAGGACGTTGGA+TGG | - | chr4.4:88105346-88105365 | None:intergenic | 45.0% | |
AGTTTAGGAACTGTGAGTGG+TGG | + | chr4.4:88103356-88103375 | MS.gene37310:CDS | 45.0% | |
ATCCAAGAATGACACAGAGC+TGG | + | chr4.4:88105050-88105069 | MS.gene37310:CDS | 45.0% | |
ATGGACGTCACTTGTGAAAC+TGG | - | chr4.4:88102726-88102745 | None:intergenic | 45.0% | |
CAAATCCACCTTGTCAGTTG+TGG | - | chr4.4:88104359-88104378 | None:intergenic | 45.0% | |
CAAATTCCTGGCTGTTAACC+AGG | - | chr4.4:88105637-88105656 | None:intergenic | 45.0% | |
CATGACAGCCTTTCCAAGAA+AGG | + | chr4.4:88103770-88103789 | MS.gene37310:CDS | 45.0% | |
CTACTTCTACAGCATGCAAG+TGG | + | chr4.4:88105929-88105948 | MS.gene37310:CDS | 45.0% | |
CTGCATGAATACCCAGACAT+TGG | - | chr4.4:88102352-88102371 | None:intergenic | 45.0% | |
CTTACGGCTTTCACACCTAA+TGG | + | chr4.4:88100856-88100875 | MS.gene37310:CDS | 45.0% | |
CTTAGACATCCTTTACACCG+GGG | + | chr4.4:88106567-88106586 | MS.gene37310:CDS | 45.0% | |
CTTGTACACGCAAGATGAGA+AGG | + | chr4.4:88105194-88105213 | MS.gene37310:CDS | 45.0% | |
GAGTGGCAATCAAGAACCAA+TGG | - | chr4.4:88103407-88103426 | None:intergenic | 45.0% | |
GCAAAGAGATGATACTCTCC+TGG | + | chr4.4:88105616-88105635 | MS.gene37310:intron | 45.0% | |
GCAGCTATTCTGTCTGCAAA+TGG | + | chr4.4:88100886-88100905 | MS.gene37310:CDS | 45.0% | |
GGACAGCTTCTTTGTGTTGT+TGG | + | chr4.4:88102869-88102888 | MS.gene37310:CDS | 45.0% | |
GTAGTTTGAGGACGTTGGAT+GGG | - | chr4.4:88105345-88105364 | None:intergenic | 45.0% | |
GTGTACTTGACCTTCAGAAG+AGG | - | chr4.4:88103507-88103526 | None:intergenic | 45.0% | |
TAAAGCAGCCCACAACACAA+TGG | - | chr4.4:88101871-88101890 | None:intergenic | 45.0% | |
TCACTGGGATAAAGGTAGTG+TGG | + | chr4.4:88101660-88101679 | MS.gene37310:intron | 45.0% | |
TCAGTTGTGGTTGGAAGATC+AGG | - | chr4.4:88104346-88104365 | None:intergenic | 45.0% | |
TCCATCTTGCTTGTAAGGGA+GGG | + | chr4.4:88105531-88105550 | MS.gene37310:intron | 45.0% | |
TCTTCCAACCACAACTGACA+AGG | + | chr4.4:88104348-88104367 | MS.gene37310:CDS | 45.0% | |
TGACAGAAATACCCGGGAAT+CGG | - | chr4.4:88102011-88102030 | None:intergenic | 45.0% | |
TGAGAAAGCCAGTGAAGAGA+TGG | - | chr4.4:88102969-88102988 | None:intergenic | 45.0% | |
TGCAAGTGGAATAATGTCCC+AGG | + | chr4.4:88105943-88105962 | MS.gene37310:CDS | 45.0% | |
TGGCAGATGTCTTACATGAG+TGG | + | chr4.4:88105473-88105492 | MS.gene37310:intron | 45.0% | |
TTCCATCTTGCTTGTAAGGG+AGG | + | chr4.4:88105530-88105549 | MS.gene37310:intron | 45.0% | |
TTCCCCCATGGAATGGAATT+TGG | - | chr4.4:88103621-88103640 | None:intergenic | 45.0% | |
TTGATGTTTCCACTGGTGAG+AGG | + | chr4.4:88101967-88101986 | MS.gene37310:CDS | 45.0% | |
! | ATCCAGCTCTGTGTCATTCT+TGG | - | chr4.4:88105055-88105074 | None:intergenic | 45.0% |
! | CACAACTGACAAGGTGGATT+TGG | + | chr4.4:88104357-88104376 | MS.gene37310:CDS | 45.0% |
! | CATTGTTTGCCCTTCTGAAG+AGG | - | chr4.4:88101810-88101829 | None:intergenic | 45.0% |
! | TGTGATGCAACTCCTTTTGC+AGG | + | chr4.4:88105291-88105310 | MS.gene37310:intron | 45.0% |
! | TGTTGTTGGACATGATGGGA+AGG | + | chr4.4:88102883-88102902 | MS.gene37310:CDS | 45.0% |
! | TTGGTTCTTGATTGCCACTC+CGG | + | chr4.4:88103407-88103426 | MS.gene37310:CDS | 45.0% |
! | TTTTGGCATGTGCTCTTCCA+TGG | + | chr4.4:88105897-88105916 | MS.gene37310:CDS | 45.0% |
!! | GTGGAGATTTGTTAGCAGAG+TGG | + | chr4.4:88101585-88101604 | MS.gene37310:CDS | 45.0% |
!! | TCTTCACTGGCTTTCTCACA+TGG | + | chr4.4:88102971-88102990 | MS.gene37310:CDS | 45.0% |
AAAACAACTCCCACTAGGGC+AGG | - | chr4.4:88103905-88103924 | None:intergenic | 50.0% | |
AACCAATGGAGCATGCCTCA+AGG | - | chr4.4:88103393-88103412 | None:intergenic | 50.0% | |
ACCAATGGAGCATGCCTCAA+GGG | - | chr4.4:88103392-88103411 | None:intergenic | 50.0% | |
AGCAATCCAGAAGAAGGGTG+CGG | - | chr4.4:88105176-88105195 | None:intergenic | 50.0% | |
CATCTTGCTTGTAAGGGAGG+GGG | + | chr4.4:88105533-88105552 | MS.gene37310:intron | 50.0% | |
CCATCTTGCTTGTAAGGGAG+GGG | + | chr4.4:88105532-88105551 | MS.gene37310:intron | 50.0% | |
CCTACTAGTCATCCGATTCC+CGG | + | chr4.4:88101996-88102015 | MS.gene37310:CDS | 50.0% | |
CTACTAGTCATCCGATTCCC+GGG | + | chr4.4:88101997-88102016 | MS.gene37310:CDS | 50.0% | |
CTCGCTGTTGATGTTTCCAC+TGG | + | chr4.4:88101960-88101979 | MS.gene37310:CDS | 50.0% | |
GGTGTGAAAGCCGTAAGAAC+AGG | - | chr4.4:88100853-88100872 | None:intergenic | 50.0% | |
GTCTCAGCAGTTACGTCTTC+AGG | + | chr4.4:88103452-88103471 | MS.gene37310:CDS | 50.0% | |
TACTCTCCTGGTTAACAGCC+AGG | + | chr4.4:88105628-88105647 | MS.gene37310:intron | 50.0% | |
TATGCCAGACAGTGTTCCCA+TGG | + | chr4.4:88105435-88105454 | MS.gene37310:intron | 50.0% | |
TCAGCAGTTACGTCTTCAGG+TGG | + | chr4.4:88103455-88103474 | MS.gene37310:CDS | 50.0% | |
TCCAACCACAACTGACAAGG+TGG | + | chr4.4:88104351-88104370 | MS.gene37310:CDS | 50.0% | |
TCCACCTTGTCAGTTGTGGT+TGG | - | chr4.4:88104355-88104374 | None:intergenic | 50.0% | |
TTCCATTCCATGGGGGAAGA+CGG | + | chr4.4:88103623-88103642 | MS.gene37310:CDS | 50.0% | |
TTTCCACTGGTGAGAGGAAG+TGG | + | chr4.4:88101973-88101992 | MS.gene37310:CDS | 50.0% | |
! | TTAGCTCTCGGAACGGAAGA+TGG | + | chr4.4:88101930-88101949 | MS.gene37310:CDS | 50.0% |
ACCCTTGAGGCATGCTCCAT+TGG | + | chr4.4:88103388-88103407 | MS.gene37310:CDS | 55.0% | |
AGATGACCGCACCCTTCTTC+TGG | + | chr4.4:88105167-88105186 | MS.gene37310:CDS | 55.0% | |
CATCTTCATTGCCACCGGAG+TGG | - | chr4.4:88103424-88103443 | None:intergenic | 55.0% | |
CCCCTCCCTTACAAGCAAGA+TGG | - | chr4.4:88105535-88105554 | None:intergenic | 55.0% | |
CCGGGAATCGGATGACTAGT+AGG | - | chr4.4:88101999-88102018 | None:intergenic | 55.0% | |
CTTGTAAGGGAGGGGGAAAG+AGG | + | chr4.4:88105540-88105559 | MS.gene37310:intron | 55.0% | |
GAGTGGAGTGAGGAAGTCGA+GGG | - | chr4.4:88104863-88104882 | None:intergenic | 55.0% | |
GCAGAGTGGAAGCCATCAGA+TGG | + | chr4.4:88101599-88101618 | MS.gene37310:CDS | 55.0% | |
GCATGCCTCAAGGGTAGTGT+TGG | - | chr4.4:88103383-88103402 | None:intergenic | 55.0% | |
GTGGTCCAACACTACCCTTG+AGG | + | chr4.4:88103375-88103394 | MS.gene37310:CDS | 55.0% | |
GTTCTTGATTGCCACTCCGG+TGG | + | chr4.4:88103410-88103429 | MS.gene37310:CDS | 55.0% | |
TGCTCCATGGGAACACTGTC+TGG | - | chr4.4:88105442-88105461 | None:intergenic | 55.0% | |
AGGCCACTTCCTCTCACCAG+TGG | - | chr4.4:88101979-88101998 | None:intergenic | 60.0% | |
CATCTGTCCGTCTTCCCCCA+TGG | - | chr4.4:88103633-88103652 | None:intergenic | 60.0% | |
GGAGTGGAGTGAGGAAGTCG+AGG | - | chr4.4:88104864-88104883 | None:intergenic | 60.0% | |
GTCCGTCTTCCCCCATGGAA+TGG | - | chr4.4:88103628-88103647 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 88100826 | 88106588 | 88100826 | ID=MS.gene37310 |
chr4.4 | mRNA | 88100826 | 88106588 | 88100826 | ID=MS.gene37310.t1;Parent=MS.gene37310 |
chr4.4 | exon | 88100826 | 88100918 | 88100826 | ID=MS.gene37310.t1.exon1;Parent=MS.gene37310.t1 |
chr4.4 | CDS | 88100826 | 88100918 | 88100826 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
chr4.4 | exon | 88101569 | 88101673 | 88101569 | ID=MS.gene37310.t1.exon2;Parent=MS.gene37310.t1 |
chr4.4 | CDS | 88101569 | 88101673 | 88101569 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
chr4.4 | exon | 88101903 | 88102018 | 88101903 | ID=MS.gene37310.t1.exon3;Parent=MS.gene37310.t1 |
chr4.4 | CDS | 88101903 | 88102018 | 88101903 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
chr4.4 | exon | 88102838 | 88102992 | 88102838 | ID=MS.gene37310.t1.exon4;Parent=MS.gene37310.t1 |
chr4.4 | CDS | 88102838 | 88102992 | 88102838 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
chr4.4 | exon | 88103086 | 88103174 | 88103086 | ID=MS.gene37310.t1.exon5;Parent=MS.gene37310.t1 |
chr4.4 | CDS | 88103086 | 88103174 | 88103086 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
chr4.4 | exon | 88103260 | 88103791 | 88103260 | ID=MS.gene37310.t1.exon6;Parent=MS.gene37310.t1 |
chr4.4 | CDS | 88103260 | 88103791 | 88103260 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
chr4.4 | exon | 88104293 | 88104379 | 88104293 | ID=MS.gene37310.t1.exon7;Parent=MS.gene37310.t1 |
chr4.4 | CDS | 88104293 | 88104379 | 88104293 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
chr4.4 | exon | 88104953 | 88105215 | 88104953 | ID=MS.gene37310.t1.exon8;Parent=MS.gene37310.t1 |
chr4.4 | CDS | 88104953 | 88105215 | 88104953 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
chr4.4 | exon | 88105313 | 88105395 | 88105313 | ID=MS.gene37310.t1.exon9;Parent=MS.gene37310.t1 |
chr4.4 | CDS | 88105313 | 88105395 | 88105313 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
chr4.4 | exon | 88105889 | 88106000 | 88105889 | ID=MS.gene37310.t1.exon10;Parent=MS.gene37310.t1 |
chr4.4 | CDS | 88105889 | 88106000 | 88105889 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
chr4.4 | exon | 88106514 | 88106588 | 88106514 | ID=MS.gene37310.t1.exon11;Parent=MS.gene37310.t1 |
chr4.4 | CDS | 88106514 | 88106588 | 88106514 | ID=cds.MS.gene37310.t1;Parent=MS.gene37310.t1 |
Gene Sequence |
Protein sequence |