Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050912.t1 | XP_003626220.1 | 98.4 | 124 | 2 | 0 | 1 | 124 | 1 | 124 | 6.70E-59 | 236.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050912.t1 | Q9M9W1 | 88.7 | 124 | 14 | 0 | 1 | 124 | 1 | 124 | 3.5e-56 | 218.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050912.t1 | G7KXJ9 | 98.4 | 124 | 2 | 0 | 1 | 124 | 1 | 124 | 4.8e-59 | 236.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050134 | MS.gene050912 | 0.858688 | 6.94E-63 | -1.69E-46 |
| MS.gene050791 | MS.gene050912 | 0.884873 | 1.32E-71 | -1.69E-46 |
| MS.gene050912 | MS.gene051984 | 0.818219 | 2.20E-52 | -1.69E-46 |
| MS.gene050912 | MS.gene053224 | 0.851296 | 9.74E-61 | -1.69E-46 |
| MS.gene050912 | MS.gene057272 | 0.873755 | 1.15E-67 | -1.69E-46 |
| MS.gene050912 | MS.gene057641 | 0.849301 | 3.53E-60 | -1.69E-46 |
| MS.gene050912 | MS.gene057643 | 0.849456 | 3.20E-60 | -1.69E-46 |
| MS.gene050912 | MS.gene06581 | 0.863434 | 2.50E-64 | -1.69E-46 |
| MS.gene050912 | MS.gene06583 | 0.868306 | 7.20E-66 | -1.69E-46 |
| MS.gene050912 | MS.gene065917 | 0.836368 | 9.75E-57 | -1.69E-46 |
| MS.gene050912 | MS.gene06617 | 0.815798 | 7.68E-52 | -1.69E-46 |
| MS.gene050912 | MS.gene067331 | 0.801484 | 8.81E-49 | -1.69E-46 |
| MS.gene050912 | MS.gene06803 | 0.851852 | 6.78E-61 | -1.69E-46 |
| MS.gene050912 | MS.gene06833 | 0.815661 | 8.25E-52 | -1.69E-46 |
| MS.gene050912 | MS.gene07018 | 0.829872 | 4.04E-55 | -1.69E-46 |
| MS.gene050912 | MS.gene070946 | 0.835623 | 1.51E-56 | -1.69E-46 |
| MS.gene050912 | MS.gene072093 | 0.803369 | 3.60E-49 | -1.69E-46 |
| MS.gene050912 | MS.gene072503 | 0.970308 | 2.03E-131 | -1.69E-46 |
| MS.gene050912 | MS.gene072589 | 0.868438 | 6.53E-66 | -1.69E-46 |
| MS.gene050912 | MS.gene072591 | 0.875237 | 3.61E-68 | -1.69E-46 |
| MS.gene050912 | MS.gene08521 | 0.834636 | 2.67E-56 | -1.69E-46 |
| MS.gene050912 | MS.gene08869 | 0.800152 | 1.65E-48 | -1.69E-46 |
| MS.gene050912 | MS.gene08870 | 0.827598 | 1.43E-54 | -1.69E-46 |
| MS.gene050912 | MS.gene08871 | 0.834308 | 3.23E-56 | -1.69E-46 |
| MS.gene050912 | MS.gene09761 | 0.833773 | 4.40E-56 | -1.69E-46 |
| MS.gene050912 | MS.gene09779 | 0.828368 | 9.34E-55 | -1.69E-46 |
| MS.gene050912 | MS.gene20153 | 0.872996 | 2.07E-67 | -1.69E-46 |
| MS.gene050912 | MS.gene22507 | 0.836686 | 8.09E-57 | -1.69E-46 |
| MS.gene050912 | MS.gene22784 | 0.876566 | 1.26E-68 | -1.69E-46 |
| MS.gene050912 | MS.gene23031 | 0.818544 | 1.85E-52 | -1.69E-46 |
| MS.gene050912 | MS.gene23303 | 0.848157 | 7.33E-60 | -1.69E-46 |
| MS.gene050912 | MS.gene24639 | 0.843789 | 1.13E-58 | -1.69E-46 |
| MS.gene050912 | MS.gene25903 | 0.825534 | 4.45E-54 | -1.69E-46 |
| MS.gene050912 | MS.gene26343 | 0.831604 | 1.52E-55 | -1.69E-46 |
| MS.gene050912 | MS.gene26707 | 0.827292 | 1.70E-54 | -1.69E-46 |
| MS.gene050912 | MS.gene28147 | 0.834432 | 3.01E-56 | -1.69E-46 |
| MS.gene050912 | MS.gene31991 | 0.831552 | 1.57E-55 | -1.69E-46 |
| MS.gene050912 | MS.gene34372 | 0.836083 | 1.15E-56 | -1.69E-46 |
| MS.gene050912 | MS.gene34957 | 0.82081 | 5.63E-53 | -1.69E-46 |
| MS.gene050912 | MS.gene37037 | 0.823974 | 1.04E-53 | -1.69E-46 |
| MS.gene050912 | MS.gene39902 | 0.806103 | 9.68E-50 | -1.69E-46 |
| MS.gene050912 | MS.gene40831 | 0.805366 | 1.38E-49 | -1.69E-46 |
| MS.gene050912 | MS.gene43070 | 0.806672 | 7.34E-50 | -1.69E-46 |
| MS.gene050912 | MS.gene43071 | 0.821543 | 3.82E-53 | -1.69E-46 |
| MS.gene050912 | MS.gene46387 | 0.856767 | 2.58E-62 | -1.69E-46 |
| MS.gene050912 | MS.gene50640 | 0.824901 | 6.28E-54 | -1.69E-46 |
| MS.gene050912 | MS.gene50756 | 0.843333 | 1.49E-58 | -1.69E-46 |
| MS.gene050912 | MS.gene50758 | 0.871217 | 8.09E-67 | -1.69E-46 |
| MS.gene050912 | MS.gene51534 | 0.856404 | 3.29E-62 | -1.69E-46 |
| MS.gene050912 | MS.gene55890 | 0.875237 | 3.61E-68 | -1.69E-46 |
| MS.gene050912 | MS.gene59609 | 0.852908 | 3.39E-61 | -1.69E-46 |
| MS.gene050912 | MS.gene59873 | 0.811613 | 6.41E-51 | -1.69E-46 |
| MS.gene050912 | MS.gene62791 | 0.817314 | 3.52E-52 | -1.69E-46 |
| MS.gene050912 | MS.gene68740 | 0.802955 | 4.39E-49 | -1.69E-46 |
| MS.gene050912 | MS.gene70316 | 0.832494 | 9.16E-56 | -1.69E-46 |
| MS.gene050912 | MS.gene70579 | 0.823108 | 1.65E-53 | -1.69E-46 |
| MS.gene050912 | MS.gene72382 | 0.886227 | 4.11E-72 | -1.69E-46 |
| MS.gene050912 | MS.gene73000 | 0.840433 | 8.72E-58 | -1.69E-46 |
| MS.gene050912 | MS.gene76031 | 0.830329 | 3.12E-55 | -1.69E-46 |
| MS.gene050912 | MS.gene79721 | 0.857438 | 1.63E-62 | -1.69E-46 |
| MS.gene050912 | MS.gene81099 | 0.80401 | 2.65E-49 | -1.69E-46 |
| MS.gene050912 | MS.gene82038 | 0.859721 | 3.40E-63 | -1.69E-46 |
| MS.gene050912 | MS.gene82545 | 0.868308 | 7.19E-66 | -1.69E-46 |
| MS.gene050912 | MS.gene92142 | 0.806473 | 8.09E-50 | -1.69E-46 |
| MS.gene050912 | MS.gene95803 | 0.829224 | 5.80E-55 | -1.69E-46 |
| MS.gene050912 | MS.gene96225 | 0.841028 | 6.09E-58 | -1.69E-46 |
| MS.gene050912 | MS.gene98171 | 0.853586 | 2.17E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93059 | MS.gene050912 | PPI |
| MS.gene050912 | MS.gene41772 | PPI |
| MS.gene050912 | MS.gene008793 | PPI |
| MS.gene97981 | MS.gene050912 | PPI |
| MS.gene050912 | MS.gene033714 | PPI |
| MS.gene050912 | MS.gene000897 | PPI |
| MS.gene056487 | MS.gene050912 | PPI |
| MS.gene067853 | MS.gene050912 | PPI |
| MS.gene042462 | MS.gene050912 | PPI |
| MS.gene050912 | MS.gene008794 | PPI |
| MS.gene050912 | MS.gene08169 | PPI |
| MS.gene050912 | MS.gene93058 | PPI |
| MS.gene23123 | MS.gene050912 | PPI |
| MS.gene033712 | MS.gene050912 | PPI |
| MS.gene050912 | MS.gene072503 | PPI |
| MS.gene050912 | MS.gene73391 | PPI |
| MS.gene056488 | MS.gene050912 | PPI |
| MS.gene050912 | MS.gene065392 | PPI |
| MS.gene050912 | MS.gene024279 | PPI |
| MS.gene050912 | MS.gene97980 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050912.t1 | MTR_7g112770 | 98.387 | 124 | 2 | 0 | 1 | 124 | 1 | 124 | 5.42e-87 | 249 |
| MS.gene050912.t1 | MTR_1g088450 | 94.915 | 118 | 6 | 0 | 7 | 124 | 2 | 119 | 8.92e-69 | 202 |
| MS.gene050912.t1 | MTR_1g083430 | 90.400 | 125 | 11 | 1 | 1 | 124 | 1 | 125 | 3.21e-68 | 201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050912.t1 | AT3G05560 | 88.710 | 124 | 14 | 0 | 1 | 124 | 1 | 124 | 3.08e-68 | 201 |
| MS.gene050912.t1 | AT3G05560 | 88.710 | 124 | 14 | 0 | 1 | 124 | 1 | 124 | 3.08e-68 | 201 |
| MS.gene050912.t1 | AT3G05560 | 88.710 | 124 | 14 | 0 | 1 | 124 | 1 | 124 | 3.08e-68 | 201 |
| MS.gene050912.t1 | AT5G27770 | 87.611 | 113 | 14 | 0 | 1 | 113 | 1 | 113 | 9.50e-53 | 162 |
| MS.gene050912.t1 | AT1G02830 | 71.818 | 110 | 31 | 0 | 6 | 115 | 8 | 117 | 1.06e-44 | 142 |
Find 26 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCACCCTTCTTCTTTCCCT+TGG | 0.344547 | 7.1:-3369228 | None:intergenic |
| TCCATGATCTTGTCTTCCAC+TGG | 0.448631 | 7.1:-3369275 | None:intergenic |
| GGTGGAAAAGCTGGTGCTCT+TGG | 0.478615 | 7.1:+3369341 | MS.gene050912:CDS |
| ATCAAGGTCGGTGGAAAAGC+TGG | 0.491281 | 7.1:+3369332 | MS.gene050912:CDS |
| ATGAGTCGTGGTAACGCAGC+TGG | 0.519123 | 7.1:+3369203 | MS.gene050912:CDS |
| CACTGGCTTAGCACAGTCAA+TGG | 0.524581 | 7.1:-3369258 | None:intergenic |
| CATTGCTGAGAACGAGGGAG+AGG | 0.527747 | 7.1:+3370625 | MS.gene050912:CDS |
| TGGTGCCAAGGGAAAGAAGA+AGG | 0.529349 | 7.1:+3369223 | MS.gene050912:CDS |
| CTTGCTCTTCTCACGGGTAA+CGG | 0.534877 | 7.1:-3369375 | None:intergenic |
| TGGTAACGCAGCTGGTGCCA+AGG | 0.535573 | 7.1:+3369211 | MS.gene050912:CDS |
| GTTTCTTCAAGAGCGAATCA+AGG | 0.539769 | 7.1:+3369316 | MS.gene050912:CDS |
| ATAGAAGTATCTATGAGCTC+AGG | 0.546088 | 7.1:+3370594 | MS.gene050912:CDS |
| AGTGATCTTGCTCTTCTCAC+GGG | 0.552636 | 7.1:-3369381 | None:intergenic |
| CAGTGATCTTGCTCTTCTCA+CGG | 0.553223 | 7.1:-3369382 | None:intergenic |
| GCCAGTGGAAGACAAGATCA+TGG | 0.553292 | 7.1:+3369274 | MS.gene050912:CDS |
| CTTCTCACGGGTAACGGTGA+CGG | 0.568235 | 7.1:-3369369 | None:intergenic |
| AGAAACACAATGTAAGAGAC+TGG | 0.568481 | 7.1:+3370546 | MS.gene050912:CDS |
| GGTAACGCAGCTGGTGCCAA+GGG | 0.575575 | 7.1:+3369212 | MS.gene050912:CDS |
| CTTCAACATTGCTGAGAACG+AGG | 0.581013 | 7.1:+3370619 | MS.gene050912:CDS |
| CTTGGAAAAGTTACTGTCAG+AGG | 0.604590 | 7.1:-3369408 | None:intergenic |
| CTTAGCACAGTCAATGGTGA+AGG | 0.610280 | 7.1:-3369252 | None:intergenic |
| CTTCAAGAGCGAATCAAGGT+CGG | 0.612896 | 7.1:+3369320 | MS.gene050912:CDS |
| CATTGACTGTGCTAAGCCAG+TGG | 0.621872 | 7.1:+3369259 | MS.gene050912:CDS |
| CAAGAGCGAATCAAGGTCGG+TGG | 0.643278 | 7.1:+3369323 | MS.gene050912:CDS |
| GGTGCCAAGGGAAAGAAGAA+GGG | 0.657143 | 7.1:+3369224 | MS.gene050912:CDS |
| TTCAACATTGCTGAGAACGA+GGG | 0.691023 | 7.1:+3370620 | MS.gene050912:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAGATAAATGATAGTTAT+GGG | - | chr7.1:3370168-3370187 | None:intergenic | 15.0% |
| !!! | GCTTTGATTTAATATTTTAT+TGG | + | chr7.1:3369487-3369506 | MS.gene050912:intron | 15.0% |
| !! | AAAGATAAATGATAGAGTAA+TGG | - | chr7.1:3370113-3370132 | None:intergenic | 20.0% |
| !! | AAGATAAATGATAGAGTAAT+GGG | - | chr7.1:3370112-3370131 | None:intergenic | 20.0% |
| !! | ACATCTAATTAATAGCTTAT+TGG | + | chr7.1:3369843-3369862 | MS.gene050912:intron | 20.0% |
| !! | ATACTATATTCTGTAGATAT+AGG | - | chr7.1:3370293-3370312 | None:intergenic | 20.0% |
| !! | ATATCTACAGAATATAGTAT+TGG | + | chr7.1:3370293-3370312 | MS.gene050912:intron | 20.0% |
| !! | GTAAAGATAAATGATAGTTA+TGG | - | chr7.1:3370169-3370188 | None:intergenic | 20.0% |
| !! | TATCTACAGAATATAGTATT+GGG | + | chr7.1:3370294-3370313 | MS.gene050912:intron | 20.0% |
| !!! | TAATAAGTGTTCTTTAAGAT+AGG | + | chr7.1:3369766-3369785 | MS.gene050912:intron | 20.0% |
| ! | AAGTAGTCTCACAAAATTTA+TGG | + | chr7.1:3370051-3370070 | MS.gene050912:intron | 25.0% |
| ! | AATTAGATGTTTATCCAAAC+AGG | - | chr7.1:3369833-3369852 | None:intergenic | 25.0% |
| ! | ATAACTTAGTGCTTATACAA+CGG | + | chr7.1:3369797-3369816 | MS.gene050912:intron | 25.0% |
| ! | ATTCAGTGAAGATAAGTTAT+TGG | + | chr7.1:3369534-3369553 | MS.gene050912:intron | 25.0% |
| !! | ATAAGTTTTGCGAAACTATT+TGG | + | chr7.1:3369682-3369701 | MS.gene050912:intron | 25.0% |
| !! | TAAGTTTTGCGAAACTATTT+GGG | + | chr7.1:3369683-3369702 | MS.gene050912:intron | 25.0% |
| !! | TTGCTTGGTTGATTTATTTA+TGG | + | chr7.1:3369574-3369593 | MS.gene050912:intron | 25.0% |
| !!! | AAGATAGTTGATAGTCATTT+TGG | + | chr7.1:3369608-3369627 | MS.gene050912:intron | 25.0% |
| !!! | TCATTTTGGTTTCAATTTGT+TGG | + | chr7.1:3369622-3369641 | MS.gene050912:intron | 25.0% |
| AAGTTATTGGCATGAAATCA+TGG | + | chr7.1:3369547-3369566 | MS.gene050912:intron | 30.0% | |
| AGACCTTATGTTATTAGTTG+CGG | - | chr7.1:3370467-3370486 | None:intergenic | 30.0% | |
| AGTACGATAACAACAGTATA+AGG | + | chr7.1:3370382-3370401 | MS.gene050912:intron | 30.0% | |
| AGTTATGGGACTGTTAAAAT+TGG | - | chr7.1:3370154-3370173 | None:intergenic | 30.0% | |
| CAGTATAAGGTCTACTTAAT+TGG | + | chr7.1:3370395-3370414 | MS.gene050912:intron | 30.0% | |
| GTAAATGAATTATTACCGCT+TGG | - | chr7.1:3369429-3369448 | None:intergenic | 30.0% | |
| TAGTCTCACAAAATTTATGG+CGG | + | chr7.1:3370054-3370073 | MS.gene050912:intron | 30.0% | |
| TCAGCAAACTAATTCATTGA+AGG | + | chr7.1:3370320-3370339 | MS.gene050912:intron | 30.0% | |
| TTTCCGCAACTAATAACATA+AGG | + | chr7.1:3370461-3370480 | MS.gene050912:intron | 30.0% | |
| !! | GTGTTCTTTAAGATAGGTTA+TGG | + | chr7.1:3369772-3369791 | MS.gene050912:intron | 30.0% |
| !! | TTTCAATTTGTTGGTCTGTT+TGG | + | chr7.1:3369631-3369650 | MS.gene050912:intron | 30.0% |
| !!! | AGCTGATATTTTGCTGTTTT+TGG | + | chr7.1:3370423-3370442 | MS.gene050912:intron | 30.0% |
| !!! | GCTGATATTTTGCTGTTTTT+GGG | + | chr7.1:3370424-3370443 | MS.gene050912:intron | 30.0% |
| AACTTACGAACAAGAGCTTA+TGG | + | chr7.1:3369708-3369727 | MS.gene050912:intron | 35.0% | |
| AGAAACACAATGTAAGAGAC+TGG | + | chr7.1:3370546-3370565 | MS.gene050912:CDS | 35.0% | |
| GCTGTCTGAATAAGCTATAT+TGG | + | chr7.1:3369971-3369990 | MS.gene050912:intron | 35.0% | |
| GCTTATTTGAGCTTGTCTAT+GGG | + | chr7.1:3369658-3369677 | MS.gene050912:intron | 35.0% | |
| TGAAATCATGGTTCATTGCT+TGG | + | chr7.1:3369559-3369578 | MS.gene050912:intron | 35.0% | |
| TGCTTATACAACGGCAATAT+AGG | + | chr7.1:3369806-3369825 | MS.gene050912:intron | 35.0% | |
| ! | AGTAATGGGACTGTTAAGAT+TGG | - | chr7.1:3370098-3370117 | None:intergenic | 35.0% |
| ! | ATTTGTTGGTCTGTTTGGAT+TGG | + | chr7.1:3369636-3369655 | MS.gene050912:intron | 35.0% |
| ! | CAAATCATTGTTTGCTACTC+TGG | + | chr7.1:3369448-3369467 | MS.gene050912:intron | 35.0% |
| !! | ATAGAAGTATCTATGAGCTC+AGG | + | chr7.1:3370594-3370613 | MS.gene050912:CDS | 35.0% |
| ATAAGCTGTCTATCCCAACA+CGG | + | chr7.1:3370267-3370286 | MS.gene050912:intron | 40.0% | |
| CTTGGAAAAGTTACTGTCAG+AGG | - | chr7.1:3369411-3369430 | None:intergenic | 40.0% | |
| GGCTTATTTGAGCTTGTCTA+TGG | + | chr7.1:3369657-3369676 | MS.gene050912:intron | 40.0% | |
| GTTTCTTCAAGAGCGAATCA+AGG | + | chr7.1:3369316-3369335 | MS.gene050912:CDS | 40.0% | |
| TTCAACATTGCTGAGAACGA+GGG | + | chr7.1:3370620-3370639 | MS.gene050912:CDS | 40.0% | |
| ! | CTGACAGTAACTTTTCCAAG+CGG | + | chr7.1:3369411-3369430 | MS.gene050912:CDS | 40.0% |
| ACGGCAATATAGGTCCTGTT+TGG | + | chr7.1:3369816-3369835 | MS.gene050912:intron | 45.0% | |
| AGTGATCTTGCTCTTCTCAC+GGG | - | chr7.1:3369384-3369403 | None:intergenic | 45.0% | |
| CAGTGATCTTGCTCTTCTCA+CGG | - | chr7.1:3369385-3369404 | None:intergenic | 45.0% | |
| CTGTAGATATAGGCCGTGTT+GGG | - | chr7.1:3370283-3370302 | None:intergenic | 45.0% | |
| CTTAGCACAGTCAATGGTGA+AGG | - | chr7.1:3369255-3369274 | None:intergenic | 45.0% | |
| CTTCAACATTGCTGAGAACG+AGG | + | chr7.1:3370619-3370638 | MS.gene050912:CDS | 45.0% | |
| CTTCAAGAGCGAATCAAGGT+CGG | + | chr7.1:3369320-3369339 | MS.gene050912:CDS | 45.0% | |
| TCCATGATCTTGTCTTCCAC+TGG | - | chr7.1:3369278-3369297 | None:intergenic | 45.0% | |
| TCTGTAGATATAGGCCGTGT+TGG | - | chr7.1:3370284-3370303 | None:intergenic | 45.0% | |
| ATCAAGGTCGGTGGAAAAGC+TGG | + | chr7.1:3369332-3369351 | MS.gene050912:CDS | 50.0% | |
| CTTGCTCTTCTCACGGGTAA+CGG | - | chr7.1:3369378-3369397 | None:intergenic | 50.0% | |
| GCCAGTGGAAGACAAGATCA+TGG | + | chr7.1:3369274-3369293 | MS.gene050912:CDS | 50.0% | |
| GGTGCCAAGGGAAAGAAGAA+GGG | + | chr7.1:3369224-3369243 | MS.gene050912:CDS | 50.0% | |
| TGCACCCTTCTTCTTTCCCT+TGG | - | chr7.1:3369231-3369250 | None:intergenic | 50.0% | |
| ! | CATTGACTGTGCTAAGCCAG+TGG | + | chr7.1:3369259-3369278 | MS.gene050912:CDS | 50.0% |
| ! | TGGTGCCAAGGGAAAGAAGA+AGG | + | chr7.1:3369223-3369242 | MS.gene050912:CDS | 50.0% |
| !! | CACTGGCTTAGCACAGTCAA+TGG | - | chr7.1:3369261-3369280 | None:intergenic | 50.0% |
| CAAGAGCGAATCAAGGTCGG+TGG | + | chr7.1:3369323-3369342 | MS.gene050912:CDS | 55.0% | |
| CATTGCTGAGAACGAGGGAG+AGG | + | chr7.1:3370625-3370644 | MS.gene050912:CDS | 55.0% | |
| GGTGGAAAAGCTGGTGCTCT+TGG | + | chr7.1:3369341-3369360 | MS.gene050912:CDS | 55.0% | |
| ! | ATGAGTCGTGGTAACGCAGC+TGG | + | chr7.1:3369203-3369222 | MS.gene050912:CDS | 55.0% |
| ! | CTTCTCACGGGTAACGGTGA+CGG | - | chr7.1:3369372-3369391 | None:intergenic | 55.0% |
| ! | GGTAACGCAGCTGGTGCCAA+GGG | + | chr7.1:3369212-3369231 | MS.gene050912:CDS | 60.0% |
| ! | TGGTAACGCAGCTGGTGCCA+AGG | + | chr7.1:3369211-3369230 | MS.gene050912:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 3369203 | 3370658 | 3369203 | ID=MS.gene050912 |
| chr7.1 | mRNA | 3369203 | 3370658 | 3369203 | ID=MS.gene050912.t1;Parent=MS.gene050912 |
| chr7.1 | exon | 3369203 | 3369432 | 3369203 | ID=MS.gene050912.t1.exon1;Parent=MS.gene050912.t1 |
| chr7.1 | CDS | 3369203 | 3369432 | 3369203 | ID=cds.MS.gene050912.t1;Parent=MS.gene050912.t1 |
| chr7.1 | exon | 3370514 | 3370658 | 3370514 | ID=MS.gene050912.t1.exon2;Parent=MS.gene050912.t1 |
| chr7.1 | CDS | 3370514 | 3370658 | 3370514 | ID=cds.MS.gene050912.t1;Parent=MS.gene050912.t1 |
| Gene Sequence |
| Protein sequence |
