Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045422.t1 | RHN61912.1 | 95.3 | 766 | 31 | 1 | 1 | 766 | 1 | 761 | 0.00E+00 | 1466.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045422.t1 | B5WWZ8 | 78.5 | 757 | 153 | 7 | 10 | 765 | 1 | 748 | 0.0e+00 | 1191.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045422.t1 | A0A396I8H5 | 95.3 | 766 | 31 | 1 | 1 | 766 | 1 | 761 | 0.0e+00 | 1466.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72746 | MS.gene045422 | PPI |
| MS.gene72745 | MS.gene045422 | PPI |
| MS.gene82452 | MS.gene045422 | PPI |
| MS.gene86456 | MS.gene045422 | PPI |
| MS.gene83396 | MS.gene045422 | PPI |
| MS.gene056569 | MS.gene045422 | PPI |
| MS.gene067993 | MS.gene045422 | PPI |
| MS.gene82943 | MS.gene045422 | PPI |
| MS.gene82942 | MS.gene045422 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045422.t1 | MTR_4g080823 | 94.163 | 771 | 39 | 2 | 1 | 770 | 1 | 766 | 0.0 | 1448 |
| MS.gene045422.t1 | MTR_4g080890 | 89.182 | 758 | 76 | 2 | 10 | 766 | 1 | 753 | 0.0 | 1352 |
| MS.gene045422.t1 | MTR_0651s0010 | 90.578 | 658 | 56 | 2 | 10 | 666 | 1 | 653 | 0.0 | 1183 |
| MS.gene045422.t1 | MTR_7g097210 | 57.124 | 751 | 297 | 11 | 15 | 761 | 5 | 734 | 0.0 | 842 |
| MS.gene045422.t1 | MTR_1g075650 | 60.720 | 583 | 178 | 8 | 180 | 761 | 3 | 535 | 0.0 | 716 |
| MS.gene045422.t1 | MTR_7g097210 | 61.391 | 575 | 209 | 7 | 188 | 761 | 2 | 564 | 0.0 | 696 |
| MS.gene045422.t1 | MTR_5g025650 | 43.329 | 787 | 379 | 17 | 21 | 763 | 64 | 827 | 0.0 | 592 |
| MS.gene045422.t1 | MTR_8g072210 | 41.517 | 778 | 387 | 13 | 28 | 763 | 57 | 808 | 0.0 | 560 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene045422.t1 | AT3G23410 | 59.621 | 738 | 285 | 6 | 31 | 764 | 15 | 743 | 0.0 | 872 |
| MS.gene045422.t1 | AT4G28570 | 57.048 | 752 | 298 | 7 | 15 | 761 | 11 | 742 | 0.0 | 843 |
| MS.gene045422.t1 | AT4G28570 | 57.048 | 752 | 298 | 7 | 15 | 761 | 11 | 742 | 0.0 | 843 |
| MS.gene045422.t1 | AT3G23410 | 61.799 | 678 | 249 | 4 | 90 | 764 | 5 | 675 | 0.0 | 842 |
| MS.gene045422.t1 | AT1G03990 | 49.215 | 764 | 366 | 12 | 8 | 763 | 5 | 754 | 0.0 | 737 |
| MS.gene045422.t1 | AT4G19380 | 42.393 | 769 | 387 | 16 | 22 | 763 | 27 | 766 | 0.0 | 552 |
| MS.gene045422.t1 | AT4G19380 | 42.762 | 753 | 377 | 15 | 36 | 763 | 1 | 724 | 0.0 | 548 |
Find 148 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCCTTGTTTCTCTCCTTT+TGG | 0.180580 | 4.2:+28797771 | None:intergenic |
| TCTTGTTTGAAAATAATTAT+AGG | 0.260541 | 4.2:-28797677 | MS.gene045422:CDS |
| CAACTTCTCAAGCTTGTCTT+TGG | 0.271024 | 4.2:-28798731 | MS.gene045422:CDS |
| TGATTCCCTGGTGAATTTCT+TGG | 0.279412 | 4.2:+28797822 | None:intergenic |
| GTGATTAAATGTGCTGTTCT+TGG | 0.295870 | 4.2:+28796816 | None:intergenic |
| ATGGACCAACAATATGAAAA+TGG | 0.302883 | 4.2:-28798131 | MS.gene045422:CDS |
| CTTGAGAAGTTGTGGATAAA+TGG | 0.306281 | 4.2:+28798742 | None:intergenic |
| AAACCACTAGAGATCATTAA+TGG | 0.311728 | 4.2:+28797525 | None:intergenic |
| TATTGTGGTTCATGTGGTTA+TGG | 0.314221 | 4.2:-28797798 | MS.gene045422:CDS |
| TATTGATAAGGGTGATTCTA+TGG | 0.316225 | 4.2:-28798828 | MS.gene045422:CDS |
| TAAGCGAATGCGAGTCTAAA+AGG | 0.353718 | 4.2:+28798658 | None:intergenic |
| TTCTAGTGATGAATAATCTT+CGG | 0.371885 | 4.2:+28798163 | None:intergenic |
| TCAATATATCCATGGGAATC+AGG | 0.373653 | 4.2:-28796870 | MS.gene045422:CDS |
| CATTGTCACCAGGTGAGAAT+TGG | 0.377821 | 4.2:-28796551 | MS.gene045422:CDS |
| TGGCTTATATCAACAAGGTT+GGG | 0.380283 | 4.2:-28798808 | MS.gene045422:CDS |
| GTATACTTCTGCTCATCAAA+TGG | 0.389845 | 4.2:-28796523 | MS.gene045422:CDS |
| TATACTTCTGCTCATCAAAT+GGG | 0.393187 | 4.2:-28796522 | MS.gene045422:CDS |
| TGCTCTGTCTTAGTAAGAAA+TGG | 0.394689 | 4.2:-28798765 | MS.gene045422:CDS |
| GACTCTACTGTTTAAAGTCT+TGG | 0.401679 | 4.2:+28797611 | None:intergenic |
| TCTCTAGAACAATCACTTTG+TGG | 0.413037 | 4.2:+28798204 | None:intergenic |
| CAAAATCAAGTACTAAGAAA+AGG | 0.418237 | 4.2:-28797879 | MS.gene045422:CDS |
| CAGAAGCAGTAATATTGATA+AGG | 0.422013 | 4.2:-28798840 | MS.gene045422:CDS |
| TCTAGTGATGAATAATCTTC+GGG | 0.422485 | 4.2:+28798164 | None:intergenic |
| GATGCAGTAGTTGTTGGTTC+TGG | 0.425266 | 4.2:-28798269 | MS.gene045422:CDS |
| CACAAAATGTGTTGAAAGAA+TGG | 0.430850 | 4.2:-28798010 | MS.gene045422:CDS |
| TTGGGGACTTTGTTGATTTG+TGG | 0.432818 | 4.2:-28798790 | MS.gene045422:CDS |
| TGTGGTTATGGTTGTCCAAA+AGG | 0.434505 | 4.2:-28797786 | MS.gene045422:CDS |
| GTAGTTGTTGGTTCTGGCTG+TGG | 0.438334 | 4.2:-28798263 | MS.gene045422:CDS |
| AGAAAAGGGTGCCAAAATCT+TGG | 0.440950 | 4.2:-28797864 | MS.gene045422:CDS |
| CTTGTAGATGCTGTTGAAAA+AGG | 0.445193 | 4.2:-28797735 | MS.gene045422:CDS |
| GAAGGTGCTGTTGATGAAAA+TGG | 0.445503 | 4.2:-28796471 | MS.gene045422:CDS |
| GTTGACTGAATAGTGATCAT+AGG | 0.452880 | 4.2:+28796378 | None:intergenic |
| AAAGGTGCTGTGATCATAAC+AGG | 0.453948 | 4.2:-28797717 | MS.gene045422:CDS |
| GTGGTGGTTCAGCTGTTAAT+TGG | 0.455365 | 4.2:-28798052 | MS.gene045422:CDS |
| GCATCATCCATTGGCAATGA+AGG | 0.456373 | 4.2:+28800144 | None:intergenic |
| ACCTGCAGAAATTGTCACTT+TGG | 0.458514 | 4.2:+28797566 | None:intergenic |
| CAGAAATGTTGAAGAAAGAC+TGG | 0.461374 | 4.2:+28800073 | None:intergenic |
| ACTCACGTATATACCTCGTC+AGG | 0.463841 | 4.2:+28800033 | None:intergenic |
| TAATGAGAACACTAGCGAAC+AGG | 0.464546 | 4.2:-28796616 | MS.gene045422:CDS |
| TATCCGATGGCTTTCCATGC+CGG | 0.465397 | 4.2:+28798464 | None:intergenic |
| TCATATTGTTGGTCCATTGA+AGG | 0.466560 | 4.2:+28798137 | None:intergenic |
| AAAGTGATTGTTCTAGAGAA+AGG | 0.469246 | 4.2:-28798200 | MS.gene045422:CDS |
| GTATATACCTCGTCAGGGAT+TGG | 0.472564 | 4.2:+28800039 | None:intergenic |
| ATGGCTTATATCAACAAGGT+TGG | 0.474407 | 4.2:-28798809 | MS.gene045422:CDS |
| ATAATTGAGACACCATTACT+TGG | 0.476662 | 4.2:-28796909 | MS.gene045422:CDS |
| TGCAGAGGGCTCTCAAGCTT+AGG | 0.477034 | 4.2:-28798690 | MS.gene045422:CDS |
| TCAAATGGGGAGTTGTAGAA+TGG | 0.477133 | 4.2:-28796508 | MS.gene045422:CDS |
| GCTTCTGTCCTTTCAAATGC+AGG | 0.481266 | 4.2:-28798227 | MS.gene045422:CDS |
| GTTGGTTCTGGCTGTGGAGG+AGG | 0.482681 | 4.2:-28798257 | MS.gene045422:CDS |
| AAAGAAATGTTTGGGAGTGT+TGG | 0.485423 | 4.2:-28797634 | MS.gene045422:CDS |
| AAATGTGATGCAGTAGTTGT+TGG | 0.485936 | 4.2:-28798275 | MS.gene045422:CDS |
| GGTGACAATGCTCCTTCCAT+TGG | 0.486201 | 4.2:+28796564 | None:intergenic |
| AGAAGCAGTAATATTGATAA+GGG | 0.492373 | 4.2:-28798839 | MS.gene045422:CDS |
| AAAATCAAGTACTAAGAAAA+GGG | 0.492431 | 4.2:-28797878 | MS.gene045422:CDS |
| CTTTGTGGCCTGCATTTGAA+AGG | 0.494540 | 4.2:+28798219 | None:intergenic |
| TGATGAAAATGGTGAGAGTT+GGG | 0.496388 | 4.2:-28796460 | MS.gene045422:CDS |
| CTTAGAGTATCTATCTGCTA+TGG | 0.499902 | 4.2:-28797955 | MS.gene045422:CDS |
| CATATGCATCAATATATCCA+TGG | 0.500085 | 4.2:-28796878 | MS.gene045422:CDS |
| GAAGATTATTCATCACTAGA+AGG | 0.507111 | 4.2:-28798161 | MS.gene045422:CDS |
| TGTGTTGCCTTCATTGCCAA+TGG | 0.507516 | 4.2:-28800151 | MS.gene045422:CDS |
| GCTGGTTCAACAGTAGGTGG+TGG | 0.508719 | 4.2:-28798068 | MS.gene045422:CDS |
| TTAATGATGAGGATACTTTG+TGG | 0.510276 | 4.2:+28796961 | None:intergenic |
| GCAGCAGGAGCTGTTGAAGT+AGG | 0.511117 | 4.2:-28796672 | MS.gene045422:CDS |
| TATCCCCATGTCATTAGTAC+AGG | 0.513550 | 4.2:+28797465 | None:intergenic |
| ATCACTAGAAGGTCCTTCAA+TGG | 0.515670 | 4.2:-28798150 | MS.gene045422:CDS |
| AGTGTGCTTCCAACTGCTGT+TGG | 0.516894 | 4.2:-28796408 | MS.gene045422:CDS |
| CACAATGAAGCTACAAATTG+AGG | 0.519287 | 4.2:-28797589 | MS.gene045422:CDS |
| GGATTAACACCAACAGCAGT+TGG | 0.519690 | 4.2:+28796399 | None:intergenic |
| TTTCTAAGAGCATCATCCAT+TGG | 0.520961 | 4.2:+28800135 | None:intergenic |
| GAAACTGTGTGTGAGAGAAT+TGG | 0.522367 | 4.2:-28797933 | MS.gene045422:CDS |
| TTGAGTCAAGTGTGACATTG+AGG | 0.526976 | 4.2:+28798318 | None:intergenic |
| ATGGAAAGCCATCGGATATG+AGG | 0.528852 | 4.2:-28798459 | MS.gene045422:CDS |
| AAAGTGACAATTTCTGCAGG+TGG | 0.529305 | 4.2:-28797564 | MS.gene045422:CDS |
| AGAAGAAAACAAAGAGGCAT+AGG | 0.530309 | 4.2:+28798626 | None:intergenic |
| GGCTTATATCAACAAGGTTG+GGG | 0.532309 | 4.2:-28798807 | MS.gene045422:CDS |
| AACGAAAATTGTACACAAGA+AGG | 0.534959 | 4.2:-28797906 | MS.gene045422:CDS |
| AAGACAAGCTTGAGAAGTTG+TGG | 0.536089 | 4.2:+28798734 | None:intergenic |
| TATCACAGGTAAAATCTATG+AGG | 0.536553 | 4.2:-28797003 | MS.gene045422:intron |
| CACAACACAGAAAGAAAGAT+GGG | 0.536560 | 4.2:-28800276 | MS.gene045422:CDS |
| CTGAGAATTCTAATAGCAGC+AGG | 0.537001 | 4.2:-28796687 | MS.gene045422:CDS |
| ATACTCTAAGCTTTCAAAGA+GGG | 0.538565 | 4.2:+28797968 | None:intergenic |
| TATAGATAGTGTTTATCCAA+TGG | 0.540962 | 4.2:-28796580 | MS.gene045422:CDS |
| GCCAAAGTGACAATTTCTGC+AGG | 0.549592 | 4.2:-28797567 | MS.gene045422:CDS |
| TTGATGAAAATGGTGAGAGT+TGG | 0.551525 | 4.2:-28796461 | MS.gene045422:CDS |
| AAGAGAAAAGATTGTGCAGA+GGG | 0.551533 | 4.2:-28798704 | MS.gene045422:CDS |
| TTTGTCATCCATTGTTGAGT+GGG | 0.551643 | 4.2:-28800248 | MS.gene045422:CDS |
| CAAATGGGGAGTTGTAGAAT+GGG | 0.552016 | 4.2:-28796507 | MS.gene045422:CDS |
| TGAATGATCATTTAATGATG+AGG | 0.555682 | 4.2:+28796950 | None:intergenic |
| GAACCACAATAATGATTCCC+TGG | 0.558303 | 4.2:+28797810 | None:intergenic |
| TTTGCTGGTTCAACAGTAGG+TGG | 0.559029 | 4.2:-28798071 | MS.gene045422:CDS |
| TATATTGATGCATATGATGA+TGG | 0.559413 | 4.2:+28796885 | None:intergenic |
| AATCATTATTGTGGTTCATG+TGG | 0.563673 | 4.2:-28797804 | MS.gene045422:CDS |
| TCCATCCTGTACTAATGACA+TGG | 0.567525 | 4.2:-28797470 | MS.gene045422:CDS |
| TCACAACACAGAAAGAAAGA+TGG | 0.567714 | 4.2:-28800277 | MS.gene045422:CDS |
| GGTGAGAGTTGGGAAGCTGA+AGG | 0.571561 | 4.2:-28796450 | MS.gene045422:CDS |
| AAGTGACAATTTCTGCAGGT+GGG | 0.574604 | 4.2:-28797563 | MS.gene045422:CDS |
| TCTCTCACCCCACTCAACAA+TGG | 0.575157 | 4.2:+28800240 | None:intergenic |
| AAGTCAAGTCCTGATTCCCA+TGG | 0.575765 | 4.2:+28796861 | None:intergenic |
| AGTGACAATTTCTGCAGGTG+GGG | 0.576018 | 4.2:-28797562 | MS.gene045422:CDS |
| ATAATAAGAGACAAAGCAAG+TGG | 0.576779 | 4.2:-28796792 | MS.gene045422:CDS |
| TACTCTAAGCTTTCAAAGAG+GGG | 0.577026 | 4.2:+28797969 | None:intergenic |
| GATAGAGAGAATATGAGAGC+TGG | 0.578200 | 4.2:-28796723 | MS.gene045422:CDS |
| ATTGTTGAGTGGGGTGAGAG+AGG | 0.578457 | 4.2:-28800238 | MS.gene045422:CDS |
| CCCATGTCATTAGTACAGGA+TGG | 0.579090 | 4.2:+28797469 | None:intergenic |
| GTTGTTGGTTCTGGCTGTGG+AGG | 0.580402 | 4.2:-28798260 | MS.gene045422:CDS |
| TAGAATGGGAGTGAATGAAA+AGG | 0.583569 | 4.2:-28796493 | MS.gene045422:CDS |
| TCACCAGGGAATCATTATTG+TGG | 0.584122 | 4.2:-28797813 | MS.gene045422:CDS |
| GTTTGTCATCCATTGTTGAG+TGG | 0.586629 | 4.2:-28800249 | MS.gene045422:CDS |
| ATATGCATCAATATATCCAT+GGG | 0.588719 | 4.2:-28796877 | MS.gene045422:CDS |
| AACAAGGGACTCAAGTTACA+TGG | 0.588903 | 4.2:-28797758 | MS.gene045422:CDS |
| GATAGTGTTTATCCAATGGA+AGG | 0.590334 | 4.2:-28796576 | MS.gene045422:CDS |
| AGTTGTGTCATGTTCATGCA+TGG | 0.599087 | 4.2:+28798367 | None:intergenic |
| TACAAATTCCAATTCTCACC+TGG | 0.600068 | 4.2:+28796543 | None:intergenic |
| TTGTCATCCATTGTTGAGTG+GGG | 0.601389 | 4.2:-28800247 | MS.gene045422:CDS |
| ATGGAAGGAGCATTGTCACC+AGG | 0.601599 | 4.2:-28796561 | MS.gene045422:CDS |
| CAACAATCTCTATCTAACAA+AGG | 0.604364 | 4.2:-28798341 | MS.gene045422:CDS |
| GATACTCTAAGCTTTCAAAG+AGG | 0.612780 | 4.2:+28797967 | None:intergenic |
| GTAGGAACACACAGAAGTGA+TGG | 0.615648 | 4.2:-28796654 | MS.gene045422:CDS |
| ATCACAGGTAAAATCTATGA+GGG | 0.616658 | 4.2:-28797002 | MS.gene045422:intron |
| TTCTATGGCTTATATCAACA+AGG | 0.617366 | 4.2:-28798813 | MS.gene045422:CDS |
| CCATCCTGTACTAATGACAT+GGG | 0.618479 | 4.2:-28797469 | MS.gene045422:CDS |
| TGTCCAAAAGGAGAGAAACA+AGG | 0.624436 | 4.2:-28797774 | MS.gene045422:CDS |
| TGTTGATACCTCATATCCGA+TGG | 0.624751 | 4.2:+28798451 | None:intergenic |
| AAAATGGTGATAATCCGGCA+TGG | 0.627391 | 4.2:-28798478 | MS.gene045422:CDS |
| GCTGAGATGTTAGTGAAGAG+TGG | 0.628102 | 4.2:-28798868 | MS.gene045422:CDS |
| AATCCGGCATGGAAAGCCAT+CGG | 0.629555 | 4.2:-28798467 | MS.gene045422:CDS |
| CCACCATTAATGATCTCTAG+TGG | 0.630098 | 4.2:-28797528 | MS.gene045422:CDS |
| GTGAGAGTTGGGAAGCTGAA+GGG | 0.632909 | 4.2:-28796449 | MS.gene045422:CDS |
| GAATCAAAATCAGATCTCAA+AGG | 0.635229 | 4.2:-28797435 | MS.gene045422:intron |
| TATGATGATGGTCCAAGTAA+TGG | 0.637944 | 4.2:+28796897 | None:intergenic |
| CTCACGTATATACCTCGTCA+GGG | 0.638165 | 4.2:+28800034 | None:intergenic |
| ATGGGAGTGAATGAAAAGGA+AGG | 0.638461 | 4.2:-28796489 | MS.gene045422:CDS |
| CCCAAGAGAAGAAAACAAAG+AGG | 0.641068 | 4.2:+28798620 | None:intergenic |
| ATGAGAGCTGGTTTACAACA+AGG | 0.645336 | 4.2:-28796711 | MS.gene045422:CDS |
| GACCAACAATATGAAAATGG+AGG | 0.646970 | 4.2:-28798128 | MS.gene045422:CDS |
| GTCACTAACAAGCATATGTG+AGG | 0.652709 | 4.2:-28800175 | MS.gene045422:CDS |
| GTCCAAAAGGAGAGAAACAA+GGG | 0.659274 | 4.2:-28797773 | MS.gene045422:CDS |
| TATGTGCCAAGAAATTCACC+AGG | 0.661064 | 4.2:-28797828 | MS.gene045422:CDS |
| ATACTTCTGCTCATCAAATG+GGG | 0.665706 | 4.2:-28796521 | MS.gene045422:CDS |
| AAAGAGAAAAGATTGTGCAG+AGG | 0.669869 | 4.2:-28798705 | MS.gene045422:CDS |
| GAGGATAGCAAATACAAACA+TGG | 0.673701 | 4.2:-28800219 | MS.gene045422:CDS |
| TATGTATCCAATCCCTGACG+AGG | 0.674932 | 4.2:-28800046 | MS.gene045422:intron |
| ACAGGTAAAATCTATGAGGG+AGG | 0.676529 | 4.2:-28796999 | MS.gene045422:intron |
| CCACTAGAGATCATTAATGG+TGG | 0.685061 | 4.2:+28797528 | None:intergenic |
| TGATTATGATGAATCAAGCA+AGG | 0.685314 | 4.2:-28800100 | MS.gene045422:CDS |
| ATGCGAGTCTAAAAGGAGTG+AGG | 0.691376 | 4.2:+28798665 | None:intergenic |
| CATCCTGTACTAATGACATG+GGG | 0.691532 | 4.2:-28797468 | MS.gene045422:CDS |
| ATGTGCCAAGAAATTCACCA+GGG | 0.759136 | 4.2:-28797827 | MS.gene045422:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTAAAATAACAACAT+CGG | - | chr4.2:28797092-28797111 | MS.gene045422:intron | 10.0% |
| !!! | ACTTCTTATAAATTTATTTT+AGG | + | chr4.2:28797327-28797346 | None:intergenic | 10.0% |
| !!! | CTTCTTATAAATTTATTTTA+GGG | + | chr4.2:28797326-28797345 | None:intergenic | 10.0% |
| !! | ACTCTTTATAAAATTATGTA+AGG | + | chr4.2:28797538-28797557 | None:intergenic | 15.0% |
| !! | ATAATGTAAAGATCTAATAT+GGG | - | chr4.2:28797391-28797410 | MS.gene045422:intron | 15.0% |
| !!! | AATAGTTGACAAATTTTAAT+TGG | - | chr4.2:28796837-28796856 | MS.gene045422:CDS | 15.0% |
| !!! | ATGAAAAATTTTAGAGTAAA+GGG | + | chr4.2:28797280-28797299 | None:intergenic | 15.0% |
| !!! | GTTTTTTTTAACCATATTAT+TGG | - | chr4.2:28799219-28799238 | MS.gene045422:intron | 15.0% |
| !!! | TATGAAAAATTTTAGAGTAA+AGG | + | chr4.2:28797281-28797300 | None:intergenic | 15.0% |
| !!! | TCTTGTTTGAAAATAATTAT+AGG | - | chr4.2:28798919-28798938 | MS.gene045422:intron | 15.0% |
| !! | AAAATCAAGTACTAAGAAAA+GGG | - | chr4.2:28798718-28798737 | MS.gene045422:CDS | 20.0% |
| !! | AAATTGAACTTTAAACTTTC+AGG | + | chr4.2:28797164-28797183 | None:intergenic | 20.0% |
| !! | AGAAAGAAAAAGAAATGTTT+GGG | - | chr4.2:28798954-28798973 | MS.gene045422:intron | 20.0% |
| !! | ATATAAGTTTGTAAGATAAG+AGG | + | chr4.2:28797565-28797584 | None:intergenic | 20.0% |
| !! | CAAATAAGATATATTAGATG+AGG | + | chr4.2:28797633-28797652 | None:intergenic | 20.0% |
| !! | CAATTAAAATTGAACAGTTA+TGG | - | chr4.2:28797034-28797053 | MS.gene045422:intron | 20.0% |
| !! | CATAATGTAAAGATCTAATA+TGG | - | chr4.2:28797390-28797409 | MS.gene045422:intron | 20.0% |
| !! | GGTTTAAAGAATAAAAACAT+TGG | - | chr4.2:28799089-28799108 | MS.gene045422:intron | 20.0% |
| !! | TAAAGAATAAAAACATTGGT+AGG | - | chr4.2:28799093-28799112 | MS.gene045422:intron | 20.0% |
| !! | TAACGTTAAATCATATTAGT+CGG | + | chr4.2:28796993-28797012 | None:intergenic | 20.0% |
| !!! | AATTTTTGTTAGAGTTTAGT+TGG | - | chr4.2:28799197-28799216 | MS.gene045422:intron | 20.0% |
| !!! | ATTTTGTAGGTTGATAAAAA+TGG | - | chr4.2:28798102-28798121 | MS.gene045422:CDS | 20.0% |
| ! | AGAAGCAGTAATATTGATAA+GGG | - | chr4.2:28797757-28797776 | MS.gene045422:CDS | 25.0% |
| ! | ATATGCATCAATATATCCAT+GGG | - | chr4.2:28799719-28799738 | MS.gene045422:intron | 25.0% |
| ! | ATCTTAACTAGTTACATGTT+TGG | - | chr4.2:28799435-28799454 | MS.gene045422:intron | 25.0% |
| ! | ATTCAAAATGTTTGGTATAG+TGG | - | chr4.2:28797119-28797138 | MS.gene045422:intron | 25.0% |
| ! | CAAAATCAAGTACTAAGAAA+AGG | - | chr4.2:28798717-28798736 | MS.gene045422:CDS | 25.0% |
| ! | CAGAAAGAAAAAGAAATGTT+TGG | - | chr4.2:28798953-28798972 | MS.gene045422:intron | 25.0% |
| ! | CATAGGAAAAATAATAAGCT+TGG | + | chr4.2:28799549-28799568 | None:intergenic | 25.0% |
| ! | TATAGATAGTGTTTATCCAA+TGG | - | chr4.2:28800016-28800035 | MS.gene045422:intron | 25.0% |
| ! | TATATTGATGCATATGATGA+TGG | + | chr4.2:28799714-28799733 | None:intergenic | 25.0% |
| ! | TCGGAAAAATTCAAAATGTT+TGG | - | chr4.2:28797111-28797130 | MS.gene045422:intron | 25.0% |
| ! | TGAATGATCATTTAATGATG+AGG | + | chr4.2:28799649-28799668 | None:intergenic | 25.0% |
| ! | TGATAAAAATGGTGATAATC+CGG | - | chr4.2:28798113-28798132 | MS.gene045422:CDS | 25.0% |
| ! | TGGTGTGTAATATAAAAAGT+TGG | + | chr4.2:28797442-28797461 | None:intergenic | 25.0% |
| ! | TTCTAGTGATGAATAATCTT+CGG | + | chr4.2:28798436-28798455 | None:intergenic | 25.0% |
| !! | AATAGGATTGTAGATTTTCT+TGG | - | chr4.2:28800257-28800276 | MS.gene045422:CDS | 25.0% |
| !! | ATTGTAGATTTTCTTGGAAA+GGG | - | chr4.2:28800263-28800282 | MS.gene045422:CDS | 25.0% |
| !! | CAAACATTTCTTTTTCTTTC+TGG | + | chr4.2:28798955-28798974 | None:intergenic | 25.0% |
| !! | CTGCATTTTGTATTTCAAAT+AGG | - | chr4.2:28800240-28800259 | MS.gene045422:CDS | 25.0% |
| !! | CTTTTCTTAGTACTTGATTT+TGG | + | chr4.2:28798719-28798738 | None:intergenic | 25.0% |
| !! | TCATCTATTTGATTTATCAC+AGG | - | chr4.2:28799579-28799598 | MS.gene045422:intron | 25.0% |
| !! | TTAAGAAAGTGACATTTTGT+AGG | - | chr4.2:28798089-28798108 | MS.gene045422:CDS | 25.0% |
| !! | TTCTATAATTCCCTTTTCAA+GGG | + | chr4.2:28798208-28798227 | None:intergenic | 25.0% |
| !! | TTGCATTTAGGAATTTCTTT+TGG | + | chr4.2:28796646-28796665 | None:intergenic | 25.0% |
| !! | TTTCTATAATTCCCTTTTCA+AGG | + | chr4.2:28798209-28798228 | None:intergenic | 25.0% |
| !!! | TCAAGAATAGTTATTTTTGC+TGG | - | chr4.2:28798510-28798529 | MS.gene045422:intron | 25.0% |
| !!! | TTTCTTTTTCTTTCTGGTAT+TGG | + | chr4.2:28798949-28798968 | None:intergenic | 25.0% |
| AAACCACTAGAGATCATTAA+TGG | + | chr4.2:28799074-28799093 | None:intergenic | 30.0% | |
| AACGAAAATTGTACACAAGA+AGG | - | chr4.2:28798690-28798709 | MS.gene045422:CDS | 30.0% | |
| AATCATTATTGTGGTTCATG+TGG | - | chr4.2:28798792-28798811 | MS.gene045422:CDS | 30.0% | |
| ATAACTTGGCACCAATAATA+TGG | + | chr4.2:28799233-28799252 | None:intergenic | 30.0% | |
| ATAATAAGAGACAAAGCAAG+TGG | - | chr4.2:28799804-28799823 | MS.gene045422:intron | 30.0% | |
| ATAATTGAGACACCATTACT+TGG | - | chr4.2:28799687-28799706 | MS.gene045422:intron | 30.0% | |
| ATACTCTAAGCTTTCAAAGA+GGG | + | chr4.2:28798631-28798650 | None:intergenic | 30.0% | |
| ATCACAGGTAAAATCTATGA+GGG | - | chr4.2:28799594-28799613 | MS.gene045422:intron | 30.0% | |
| ATGGACCAACAATATGAAAA+TGG | - | chr4.2:28798465-28798484 | MS.gene045422:CDS | 30.0% | |
| ATTATTGTGAGTGTACGAAA+TGG | + | chr4.2:28798035-28798054 | None:intergenic | 30.0% | |
| ATTTGAACACATGCAAACTA+TGG | - | chr4.2:28797603-28797622 | MS.gene045422:CDS | 30.0% | |
| CAACAATCTCTATCTAACAA+AGG | - | chr4.2:28798255-28798274 | MS.gene045422:CDS | 30.0% | |
| CAACTTTATATTTGTACGAG+TGG | + | chr4.2:28799383-28799402 | None:intergenic | 30.0% | |
| CACAAAATGTGTTGAAAGAA+TGG | - | chr4.2:28798586-28798605 | MS.gene045422:intron | 30.0% | |
| CACTCGTACAAATATAAAGT+TGG | - | chr4.2:28799381-28799400 | MS.gene045422:intron | 30.0% | |
| CAGAAGCAGTAATATTGATA+AGG | - | chr4.2:28797756-28797775 | MS.gene045422:CDS | 30.0% | |
| CATATGCATCAATATATCCA+TGG | - | chr4.2:28799718-28799737 | MS.gene045422:intron | 30.0% | |
| CCTGTCCAAAATTGTTAATT+TGG | + | chr4.2:28797467-28797486 | None:intergenic | 30.0% | |
| GAAGATTATTCATCACTAGA+AGG | - | chr4.2:28798435-28798454 | MS.gene045422:CDS | 30.0% | |
| GAATCAAAATCAGATCTCAA+AGG | - | chr4.2:28799161-28799180 | MS.gene045422:intron | 30.0% | |
| GTTCAACATAGAAATAGTGT+TGG | - | chr4.2:28797506-28797525 | MS.gene045422:CDS | 30.0% | |
| TAGATGAAAATACAGCTCAT+AGG | + | chr4.2:28799566-28799585 | None:intergenic | 30.0% | |
| TATACTTCTGCTCATCAAAT+GGG | - | chr4.2:28800074-28800093 | MS.gene045422:CDS | 30.0% | |
| TATCACAGGTAAAATCTATG+AGG | - | chr4.2:28799593-28799612 | MS.gene045422:intron | 30.0% | |
| TATTGATAAGGGTGATTCTA+TGG | - | chr4.2:28797768-28797787 | MS.gene045422:CDS | 30.0% | |
| TCTAGTGATGAATAATCTTC+GGG | + | chr4.2:28798435-28798454 | None:intergenic | 30.0% | |
| TGATTATGATGAATCAAGCA+AGG | - | chr4.2:28796496-28796515 | MS.gene045422:CDS | 30.0% | |
| TTAATGATGAGGATACTTTG+TGG | + | chr4.2:28799638-28799657 | None:intergenic | 30.0% | |
| TTCTATGGCTTATATCAACA+AGG | - | chr4.2:28797783-28797802 | MS.gene045422:CDS | 30.0% | |
| TTTGAACACATGCAAACTAT+GGG | - | chr4.2:28797604-28797623 | MS.gene045422:CDS | 30.0% | |
| TTTGTGTTTGTTTGATATCG+CGG | + | chr4.2:28799515-28799534 | None:intergenic | 30.0% | |
| ! | AATTAACAATTTTGGACAGG+AGG | - | chr4.2:28797467-28797486 | MS.gene045422:CDS | 30.0% |
| ! | ACCTGACTAGTAACTTTTAT+TGG | - | chr4.2:28799287-28799306 | MS.gene045422:intron | 30.0% |
| ! | ATACAAACATGGATTTTCTG+TGG | - | chr4.2:28796388-28796407 | MS.gene045422:CDS | 30.0% |
| ! | ATTAACAATTTTGGACAGGA+GGG | - | chr4.2:28797468-28797487 | MS.gene045422:CDS | 30.0% |
| ! | CAACTTTTAAGCCAAGATTT+TGG | + | chr4.2:28798746-28798765 | None:intergenic | 30.0% |
| ! | CAATTTCTGCTTGTGTTTTT+AGG | - | chr4.2:28797178-28797197 | MS.gene045422:intron | 30.0% |
| ! | CATTCTTTCAACACATTTTG+TGG | + | chr4.2:28798588-28798607 | None:intergenic | 30.0% |
| ! | CCAAAATTGTTAATTTGGCT+TGG | + | chr4.2:28797462-28797481 | None:intergenic | 30.0% |
| ! | CCAAATTAACAATTTTGGAC+AGG | - | chr4.2:28797464-28797483 | MS.gene045422:CDS | 30.0% |
| ! | CCAAGCCAAATTAACAATTT+TGG | - | chr4.2:28797459-28797478 | MS.gene045422:CDS | 30.0% |
| ! | CCTGACTAGTAACTTTTATT+GGG | - | chr4.2:28799288-28799307 | MS.gene045422:intron | 30.0% |
| ! | CCTTGCAAGTCAATTTTATA+TGG | - | chr4.2:28797357-28797376 | MS.gene045422:intron | 30.0% |
| ! | CTGACTAGTAACTTTTATTG+GGG | - | chr4.2:28799289-28799308 | MS.gene045422:intron | 30.0% |
| ! | GATTGTAGATTTTCTTGGAA+AGG | - | chr4.2:28800262-28800281 | MS.gene045422:CDS | 30.0% |
| ! | TACCTCCATTTTCATATTGT+TGG | + | chr4.2:28798473-28798492 | None:intergenic | 30.0% |
| !! | AAAATTGACTTGCAAGGTAA+GGG | + | chr4.2:28797354-28797373 | None:intergenic | 30.0% |
| !! | AAAGTGATTGTTCTAGAGAA+AGG | - | chr4.2:28798396-28798415 | MS.gene045422:CDS | 30.0% |
| !! | CACTATTTCTATGTTGAACT+TGG | + | chr4.2:28797505-28797524 | None:intergenic | 30.0% |
| !! | CCATATAAAATTGACTTGCA+AGG | + | chr4.2:28797360-28797379 | None:intergenic | 30.0% |
| !! | TAAAATTGACTTGCAAGGTA+AGG | + | chr4.2:28797355-28797374 | None:intergenic | 30.0% |
| !! | TCTATAATTCCCTTTTCAAG+GGG | + | chr4.2:28798207-28798226 | None:intergenic | 30.0% |
| !!! | CCAAGTTATCACTGATTTTT+CGG | - | chr4.2:28799244-28799263 | MS.gene045422:intron | 30.0% |
| !!! | TGAGATCTGATTTTGATTCT+GGG | + | chr4.2:28799160-28799179 | None:intergenic | 30.0% |
| !!! | TTGAGATCTGATTTTGATTC+TGG | + | chr4.2:28799161-28799180 | None:intergenic | 30.0% |
| AAAAAGAGACCCCTTGAAAA+GGG | - | chr4.2:28798195-28798214 | MS.gene045422:CDS | 35.0% | |
| AAAGAGAAAAGATTGTGCAG+AGG | - | chr4.2:28797891-28797910 | MS.gene045422:CDS | 35.0% | |
| AAATGTGATGCAGTAGTTGT+TGG | - | chr4.2:28798321-28798340 | MS.gene045422:CDS | 35.0% | |
| AACTTTAAACTTTCAGGCTC+TGG | + | chr4.2:28797158-28797177 | None:intergenic | 35.0% | |
| AAGAGAAAAGATTGTGCAGA+GGG | - | chr4.2:28797892-28797911 | MS.gene045422:CDS | 35.0% | |
| AAGTGGACAAGTAAAAACTG+AGG | - | chr4.2:28799821-28799840 | MS.gene045422:intron | 35.0% | |
| AGTGGACAAGTAAAAACTGA+GGG | - | chr4.2:28799822-28799841 | MS.gene045422:intron | 35.0% | |
| ATACTTCTGCTCATCAAATG+GGG | - | chr4.2:28800075-28800094 | MS.gene045422:CDS | 35.0% | |
| ATCTTGTCTGTCTTAGACTA+GGG | - | chr4.2:28797248-28797267 | MS.gene045422:intron | 35.0% | |
| ATGGCTTATATCAACAAGGT+TGG | - | chr4.2:28797787-28797806 | MS.gene045422:CDS | 35.0% | |
| CACAACACAGAAAGAAAGAT+GGG | - | chr4.2:28796320-28796339 | MS.gene045422:CDS | 35.0% | |
| CACAATGAAGCTACAAATTG+AGG | - | chr4.2:28799007-28799026 | MS.gene045422:intron | 35.0% | |
| CAGAAATGTTGAAGAAAGAC+TGG | + | chr4.2:28796526-28796545 | None:intergenic | 35.0% | |
| CCCAATAAAAGTTACTAGTC+AGG | + | chr4.2:28799291-28799310 | None:intergenic | 35.0% | |
| CCGAAAAATCAGTGATAACT+TGG | + | chr4.2:28799247-28799266 | None:intergenic | 35.0% | |
| CTAGTTACATGTTTGGTACA+CGG | - | chr4.2:28799442-28799461 | MS.gene045422:intron | 35.0% | |
| CTTGAGAAGTTGTGGATAAA+TGG | + | chr4.2:28797857-28797876 | None:intergenic | 35.0% | |
| CTTGTAGATGCTGTTGAAAA+AGG | - | chr4.2:28798861-28798880 | MS.gene045422:CDS | 35.0% | |
| GACCAACAATATGAAAATGG+AGG | - | chr4.2:28798468-28798487 | MS.gene045422:CDS | 35.0% | |
| GAGGATAGCAAATACAAACA+TGG | - | chr4.2:28796377-28796396 | MS.gene045422:CDS | 35.0% | |
| GATACTCTAAGCTTTCAAAG+AGG | + | chr4.2:28798632-28798651 | None:intergenic | 35.0% | |
| GATAGTGTTTATCCAATGGA+AGG | - | chr4.2:28800020-28800039 | MS.gene045422:intron | 35.0% | |
| GTATACTTCTGCTCATCAAA+TGG | - | chr4.2:28800073-28800092 | MS.gene045422:CDS | 35.0% | |
| GTTGACTGAATAGTGATCAT+AGG | + | chr4.2:28800221-28800240 | None:intergenic | 35.0% | |
| TACAAATTCCAATTCTCACC+TGG | + | chr4.2:28800056-28800075 | None:intergenic | 35.0% | |
| TACTCTAAGCTTTCAAAGAG+GGG | + | chr4.2:28798630-28798649 | None:intergenic | 35.0% | |
| TAGAATGGGAGTGAATGAAA+AGG | - | chr4.2:28800103-28800122 | MS.gene045422:CDS | 35.0% | |
| TATCTTGTCTGTCTTAGACT+AGG | - | chr4.2:28797247-28797266 | MS.gene045422:intron | 35.0% | |
| TATTGTGGTTCATGTGGTTA+TGG | - | chr4.2:28798798-28798817 | MS.gene045422:CDS | 35.0% | |
| TCAATATATCCATGGGAATC+AGG | - | chr4.2:28799726-28799745 | MS.gene045422:intron | 35.0% | |
| TCACAACACAGAAAGAAAGA+TGG | - | chr4.2:28796319-28796338 | MS.gene045422:CDS | 35.0% | |
| TCATATTGTTGGTCCATTGA+AGG | + | chr4.2:28798462-28798481 | None:intergenic | 35.0% | |
| TCTAAATGTTCAATGCCAAC+AGG | - | chr4.2:28797703-28797722 | MS.gene045422:CDS | 35.0% | |
| TGATGAAAATGGTGAGAGTT+GGG | - | chr4.2:28800136-28800155 | MS.gene045422:CDS | 35.0% | |
| TGCTCTGTCTTAGTAAGAAA+TGG | - | chr4.2:28797831-28797850 | MS.gene045422:CDS | 35.0% | |
| TGGCTTATATCAACAAGGTT+GGG | - | chr4.2:28797788-28797807 | MS.gene045422:CDS | 35.0% | |
| TTGATGAAAATGGTGAGAGT+TGG | - | chr4.2:28800135-28800154 | MS.gene045422:CDS | 35.0% | |
| TTTGTCATCCATTGTTGAGT+GGG | - | chr4.2:28796348-28796367 | MS.gene045422:CDS | 35.0% | |
| ! | AAAGAAATGTTTGGGAGTGT+TGG | - | chr4.2:28798962-28798981 | MS.gene045422:intron | 35.0% |
| ! | AGAAGAAAACAAAGAGGCAT+AGG | + | chr4.2:28797973-28797992 | None:intergenic | 35.0% |
| ! | CATTTTCCTATTAGTCGAGT+TGG | + | chr4.2:28796778-28796797 | None:intergenic | 35.0% |
| ! | CTTAGAGTATCTATCTGCTA+TGG | - | chr4.2:28798641-28798660 | MS.gene045422:CDS | 35.0% |
| ! | GACTCTACTGTTTAAAGTCT+TGG | + | chr4.2:28798988-28799007 | None:intergenic | 35.0% |
| ! | GTGATTAAATGTGCTGTTCT+TGG | + | chr4.2:28799783-28799802 | None:intergenic | 35.0% |
| ! | TTAACAATTTTGGACAGGAG+GGG | - | chr4.2:28797469-28797488 | MS.gene045422:CDS | 35.0% |
| !! | CTGCATCACATTTGATTTTG+AGG | + | chr4.2:28798314-28798333 | None:intergenic | 35.0% |
| !! | TATGATGATGGTCCAAGTAA+TGG | + | chr4.2:28799702-28799721 | None:intergenic | 35.0% |
| !! | TCTCTAGAACAATCACTTTG+TGG | + | chr4.2:28798395-28798414 | None:intergenic | 35.0% |
| !! | TTTCTAAGAGCATCATCCAT+TGG | + | chr4.2:28796464-28796483 | None:intergenic | 35.0% |
| !!! | ATTTTTGCTGGTTCAACAGT+AGG | - | chr4.2:28798522-28798541 | MS.gene045422:intron | 35.0% |
| !!! | CCTCTTTGTTTTCTTCTCTT+GGG | - | chr4.2:28797976-28797995 | MS.gene045422:CDS | 35.0% |
| !!! | TGCTTGTGTTTTTAGGAAAG+AGG | - | chr4.2:28797185-28797204 | MS.gene045422:intron | 35.0% |
| AAAAAGTTGGCGACCCTAAA+CGG | + | chr4.2:28797429-28797448 | None:intergenic | 40.0% | |
| AAAATGGTGATAATCCGGCA+TGG | - | chr4.2:28798118-28798137 | MS.gene045422:CDS | 40.0% | |
| AAAGTGACAATTTCTGCAGG+TGG | - | chr4.2:28799032-28799051 | MS.gene045422:intron | 40.0% | |
| AACAAGGGACTCAAGTTACA+TGG | - | chr4.2:28798838-28798857 | MS.gene045422:CDS | 40.0% | |
| AAGACAAGCTTGAGAAGTTG+TGG | + | chr4.2:28797865-28797884 | None:intergenic | 40.0% | |
| AAGTGACAATTTCTGCAGGT+GGG | - | chr4.2:28799033-28799052 | MS.gene045422:intron | 40.0% | |
| ACAGGTAAAATCTATGAGGG+AGG | - | chr4.2:28799597-28799616 | MS.gene045422:intron | 40.0% | |
| AGTTGTGTCATGTTCATGCA+TGG | + | chr4.2:28798232-28798251 | None:intergenic | 40.0% | |
| ATCACTAGAAGGTCCTTCAA+TGG | - | chr4.2:28798446-28798465 | MS.gene045422:CDS | 40.0% | |
| ATGGGAGTGAATGAAAAGGA+AGG | - | chr4.2:28800107-28800126 | MS.gene045422:CDS | 40.0% | |
| ATGTGCCAAGAAATTCACCA+GGG | - | chr4.2:28798769-28798788 | MS.gene045422:CDS | 40.0% | |
| ATGTTTGGTACACGGTGTAT+TGG | - | chr4.2:28799450-28799469 | MS.gene045422:intron | 40.0% | |
| ATTGGAGTGATATTCGAGTG+AGG | - | chr4.2:28799468-28799487 | MS.gene045422:intron | 40.0% | |
| CAAAAAGAGACCCCTTGAAA+AGG | - | chr4.2:28798194-28798213 | MS.gene045422:CDS | 40.0% | |
| CAAATGGGGAGTTGTAGAAT+GGG | - | chr4.2:28800089-28800108 | MS.gene045422:CDS | 40.0% | |
| CAACTTCTCAAGCTTGTCTT+TGG | - | chr4.2:28797865-28797884 | MS.gene045422:CDS | 40.0% | |
| CATCCTGTACTAATGACATG+GGG | - | chr4.2:28799128-28799147 | MS.gene045422:intron | 40.0% | |
| CCACCATTAATGATCTCTAG+TGG | - | chr4.2:28799068-28799087 | MS.gene045422:intron | 40.0% | |
| CCACTAGAGATCATTAATGG+TGG | + | chr4.2:28799071-28799090 | None:intergenic | 40.0% | |
| CCATCCTGTACTAATGACAT+GGG | - | chr4.2:28799127-28799146 | MS.gene045422:intron | 40.0% | |
| CCCAAGAGAAGAAAACAAAG+AGG | + | chr4.2:28797979-28797998 | None:intergenic | 40.0% | |
| CGTAGCAGTTTCTTGCATTT+AGG | + | chr4.2:28796658-28796677 | None:intergenic | 40.0% | |
| CTATTTGCCACAATTCAAGG+AGG | + | chr4.2:28796899-28796918 | None:intergenic | 40.0% | |
| CTGAGAATTCTAATAGCAGC+AGG | - | chr4.2:28799909-28799928 | MS.gene045422:intron | 40.0% | |
| GAAACTGTGTGTGAGAGAAT+TGG | - | chr4.2:28798663-28798682 | MS.gene045422:CDS | 40.0% | |
| GAACCACAATAATGATTCCC+TGG | + | chr4.2:28798789-28798808 | None:intergenic | 40.0% | |
| GATAGAGAGAATATGAGAGC+TGG | - | chr4.2:28799873-28799892 | MS.gene045422:intron | 40.0% | |
| GATTAGAGTCGATCCGTTTA+GGG | - | chr4.2:28797413-28797432 | MS.gene045422:intron | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | + | chr4.2:28796902-28796921 | None:intergenic | 40.0% | |
| GGCTTATATCAACAAGGTTG+GGG | - | chr4.2:28797789-28797808 | MS.gene045422:CDS | 40.0% | |
| GTCACTAACAAGCATATGTG+AGG | - | chr4.2:28796421-28796440 | MS.gene045422:CDS | 40.0% | |
| GTCCAAAAGGAGAGAAACAA+GGG | - | chr4.2:28798823-28798842 | MS.gene045422:CDS | 40.0% | |
| GTTTGATATCGCGGTGAATT+TGG | + | chr4.2:28799506-28799525 | None:intergenic | 40.0% | |
| GTTTGTCATCCATTGTTGAG+TGG | - | chr4.2:28796347-28796366 | MS.gene045422:CDS | 40.0% | |
| TAAGCGAATGCGAGTCTAAA+AGG | + | chr4.2:28797941-28797960 | None:intergenic | 40.0% | |
| TAATGAGAACACTAGCGAAC+AGG | - | chr4.2:28799980-28799999 | MS.gene045422:intron | 40.0% | |
| TATCCCCATGTCATTAGTAC+AGG | + | chr4.2:28799134-28799153 | None:intergenic | 40.0% | |
| TATGTGCCAAGAAATTCACC+AGG | - | chr4.2:28798768-28798787 | MS.gene045422:CDS | 40.0% | |
| TCAAATGGGGAGTTGTAGAA+TGG | - | chr4.2:28800088-28800107 | MS.gene045422:CDS | 40.0% | |
| TCACCAGGGAATCATTATTG+TGG | - | chr4.2:28798783-28798802 | MS.gene045422:CDS | 40.0% | |
| TCCATCCTGTACTAATGACA+TGG | - | chr4.2:28799126-28799145 | MS.gene045422:intron | 40.0% | |
| TGATTCCCTGGTGAATTTCT+TGG | + | chr4.2:28798777-28798796 | None:intergenic | 40.0% | |
| TGTACGAGTGGAAATGAACT+TGG | + | chr4.2:28799371-28799390 | None:intergenic | 40.0% | |
| TGTCCAAAAGGAGAGAAACA+AGG | - | chr4.2:28798822-28798841 | MS.gene045422:CDS | 40.0% | |
| TGTGGCTGAAAAATAGGAAG+TGG | + | chr4.2:28796876-28796895 | None:intergenic | 40.0% | |
| TGTGGTTATGGTTGTCCAAA+AGG | - | chr4.2:28798810-28798829 | MS.gene045422:CDS | 40.0% | |
| TGTTGATACCTCATATCCGA+TGG | + | chr4.2:28798148-28798167 | None:intergenic | 40.0% | |
| TTGAGTCAAGTGTGACATTG+AGG | + | chr4.2:28798281-28798300 | None:intergenic | 40.0% | |
| TTGGAGTGATATTCGAGTGA+GGG | - | chr4.2:28799469-28799488 | MS.gene045422:intron | 40.0% | |
| TTGTCATCCATTGTTGAGTG+GGG | - | chr4.2:28796349-28796368 | MS.gene045422:CDS | 40.0% | |
| ! | ACCTGCAGAAATTGTCACTT+TGG | + | chr4.2:28799033-28799052 | None:intergenic | 40.0% |
| ! | ATGAGAGCTGGTTTACAACA+AGG | - | chr4.2:28799885-28799904 | MS.gene045422:intron | 40.0% |
| !! | AAAGGTGCTGTGATCATAAC+AGG | - | chr4.2:28798879-28798898 | MS.gene045422:intron | 40.0% |
| !! | AGAAAAGGGTGCCAAAATCT+TGG | - | chr4.2:28798732-28798751 | MS.gene045422:CDS | 40.0% |
| !! | CTTTTCAAGGGGTCTCTTTT+TGG | + | chr4.2:28798196-28798215 | None:intergenic | 40.0% |
| !! | GAAGGTGCTGTTGATGAAAA+TGG | - | chr4.2:28800125-28800144 | MS.gene045422:CDS | 40.0% |
| !! | TTGGGGACTTTGTTGATTTG+TGG | - | chr4.2:28797806-28797825 | MS.gene045422:CDS | 40.0% |
| !!! | GCCTCTTTGTTTTCTTCTCT+TGG | - | chr4.2:28797975-28797994 | MS.gene045422:CDS | 40.0% |
| AAACTGCTACGATGTGCAAG+TGG | - | chr4.2:28796667-28796686 | MS.gene045422:CDS | 45.0% | |
| AACTGCTACGATGTGCAAGT+GGG | - | chr4.2:28796668-28796687 | MS.gene045422:CDS | 45.0% | |
| AAGTCAAGTCCTGATTCCCA+TGG | + | chr4.2:28799738-28799757 | None:intergenic | 45.0% | |
| ACCCACAATTAGGTTCCATG+TGG | - | chr4.2:28796695-28796714 | MS.gene045422:CDS | 45.0% | |
| ACTCACGTATATACCTCGTC+AGG | + | chr4.2:28796566-28796585 | None:intergenic | 45.0% | |
| AGCCACATGGAACCTAATTG+TGG | + | chr4.2:28796700-28796719 | None:intergenic | 45.0% | |
| AGTGACAATTTCTGCAGGTG+GGG | - | chr4.2:28799034-28799053 | MS.gene045422:intron | 45.0% | |
| ATGCGAGTCTAAAAGGAGTG+AGG | + | chr4.2:28797934-28797953 | None:intergenic | 45.0% | |
| ATGGAAAGCCATCGGATATG+AGG | - | chr4.2:28798137-28798156 | MS.gene045422:CDS | 45.0% | |
| CATTGTCACCAGGTGAGAAT+TGG | - | chr4.2:28800045-28800064 | MS.gene045422:intron | 45.0% | |
| CCCATGTCATTAGTACAGGA+TGG | + | chr4.2:28799130-28799149 | None:intergenic | 45.0% | |
| CTAACATCTCAGCAACCTGT+TGG | + | chr4.2:28797721-28797740 | None:intergenic | 45.0% | |
| CTCACGTATATACCTCGTCA+GGG | + | chr4.2:28796565-28796584 | None:intergenic | 45.0% | |
| CTTTGTGGCCTGCATTTGAA+AGG | + | chr4.2:28798380-28798399 | None:intergenic | 45.0% | |
| GCATCATCCATTGGCAATGA+AGG | + | chr4.2:28796455-28796474 | None:intergenic | 45.0% | |
| GCCAAAGTGACAATTTCTGC+AGG | - | chr4.2:28799029-28799048 | MS.gene045422:intron | 45.0% | |
| GCCACATGGAACCTAATTGT+GGG | + | chr4.2:28796699-28796718 | None:intergenic | 45.0% | |
| GCTGAGATGTTAGTGAAGAG+TGG | - | chr4.2:28797728-28797747 | MS.gene045422:CDS | 45.0% | |
| GCTTCTGTCCTTTCAAATGC+AGG | - | chr4.2:28798369-28798388 | MS.gene045422:CDS | 45.0% | |
| GGATTAACACCAACAGCAGT+TGG | + | chr4.2:28800200-28800219 | None:intergenic | 45.0% | |
| GGATTAGAGTCGATCCGTTT+AGG | - | chr4.2:28797412-28797431 | MS.gene045422:intron | 45.0% | |
| GGCAAATAGTGCGTTGTGAT+TGG | - | chr4.2:28796910-28796929 | MS.gene045422:CDS | 45.0% | |
| GTAGGAACACACAGAAGTGA+TGG | - | chr4.2:28799942-28799961 | MS.gene045422:intron | 45.0% | |
| GTATATACCTCGTCAGGGAT+TGG | + | chr4.2:28796560-28796579 | None:intergenic | 45.0% | |
| GTGGTGGTTCAGCTGTTAAT+TGG | - | chr4.2:28798544-28798563 | MS.gene045422:intron | 45.0% | |
| TACGCACCAACTCGACTAAT+AGG | - | chr4.2:28796769-28796788 | MS.gene045422:CDS | 45.0% | |
| TATGTATCCAATCCCTGACG+AGG | - | chr4.2:28796550-28796569 | MS.gene045422:CDS | 45.0% | |
| TGGAGTGATATTCGAGTGAG+GGG | - | chr4.2:28799470-28799489 | MS.gene045422:intron | 45.0% | |
| TGTGTTGCCTTCATTGCCAA+TGG | - | chr4.2:28796445-28796464 | MS.gene045422:CDS | 45.0% | |
| ! | AGGAGGTGTGGCTGAAAAAT+AGG | + | chr4.2:28796882-28796901 | None:intergenic | 45.0% |
| ! | AGTTTGAGACTTGCGAATGG+TGG | + | chr4.2:28799328-28799347 | None:intergenic | 45.0% |
| ! | TCGAGTTTGAGACTTGCGAA+TGG | + | chr4.2:28799331-28799350 | None:intergenic | 45.0% |
| !! | GATGCAGTAGTTGTTGGTTC+TGG | - | chr4.2:28798327-28798346 | MS.gene045422:CDS | 45.0% |
| !! | GTCCCTTGTTTCTCTCCTTT+TGG | + | chr4.2:28798828-28798847 | None:intergenic | 45.0% |
| !! | TTTGCTGGTTCAACAGTAGG+TGG | - | chr4.2:28798525-28798544 | MS.gene045422:intron | 45.0% |
| !!! | GGGTCTCTTTTTGGTGTCAT+TGG | + | chr4.2:28798187-28798206 | None:intergenic | 45.0% |
| !!! | TTTAATTTTTATAATCATAT+TGG | + | chr4.2:28797082-28797101 | None:intergenic | 5.0% |
| AATCCGGCATGGAAAGCCAT+CGG | - | chr4.2:28798129-28798148 | MS.gene045422:CDS | 50.0% | |
| AGCCACACCTCCTTGAATTG+TGG | - | chr4.2:28796889-28796908 | MS.gene045422:CDS | 50.0% | |
| AGTGTGCTTCCAACTGCTGT+TGG | - | chr4.2:28800188-28800207 | MS.gene045422:CDS | 50.0% | |
| ATGTGGCTGCGTTGTGCATT+CGG | - | chr4.2:28796712-28796731 | MS.gene045422:CDS | 50.0% | |
| ATTGTTGAGTGGGGTGAGAG+AGG | - | chr4.2:28796358-28796377 | MS.gene045422:CDS | 50.0% | |
| GAGACTTGCGAATGGTGGTT+GGG | + | chr4.2:28799323-28799342 | None:intergenic | 50.0% | |
| GGTGACAATGCTCCTTCCAT+TGG | + | chr4.2:28800035-28800054 | None:intergenic | 50.0% | |
| GTGAGAGTTGGGAAGCTGAA+GGG | - | chr4.2:28800147-28800166 | MS.gene045422:CDS | 50.0% | |
| TATCCGATGGCTTTCCATGC+CGG | + | chr4.2:28798135-28798154 | None:intergenic | 50.0% | |
| TCTCTCACCCCACTCAACAA+TGG | + | chr4.2:28796359-28796378 | None:intergenic | 50.0% | |
| TGAGACTTGCGAATGGTGGT+TGG | + | chr4.2:28799324-28799343 | None:intergenic | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | + | chr4.2:28796894-28796913 | None:intergenic | 50.0% | |
| ! | CGTTGTGCATTCGGTGAAGT+TGG | - | chr4.2:28796721-28796740 | MS.gene045422:CDS | 50.0% |
| !! | ATGGAAGGAGCATTGTCACC+AGG | - | chr4.2:28800035-28800054 | MS.gene045422:intron | 50.0% |
| !! | GTAGTTGTTGGTTCTGGCTG+TGG | - | chr4.2:28798333-28798352 | MS.gene045422:CDS | 50.0% |
| ACTTGCGAATGGTGGTTGGG+AGG | + | chr4.2:28799320-28799339 | None:intergenic | 55.0% | |
| AGTGGGTGGGACCCACAATT+AGG | - | chr4.2:28796685-28796704 | MS.gene045422:CDS | 55.0% | |
| CGAAATGGCACGTTGCAGCA+AGG | + | chr4.2:28798020-28798039 | None:intergenic | 55.0% | |
| CTTGCGAATGGTGGTTGGGA+GGG | + | chr4.2:28799319-28799338 | None:intergenic | 55.0% | |
| GAATGCACAACGCAGCCACA+TGG | + | chr4.2:28796713-28796732 | None:intergenic | 55.0% | |
| GCAGCAGGAGCTGTTGAAGT+AGG | - | chr4.2:28799924-28799943 | MS.gene045422:intron | 55.0% | |
| GCTACGATGTGCAAGTGGGT+GGG | - | chr4.2:28796672-28796691 | MS.gene045422:CDS | 55.0% | |
| GGTGAGAGTTGGGAAGCTGA+AGG | - | chr4.2:28800146-28800165 | MS.gene045422:CDS | 55.0% | |
| TGCAGAGGGCTCTCAAGCTT+AGG | - | chr4.2:28797906-28797925 | MS.gene045422:CDS | 55.0% | |
| TGCTACGATGTGCAAGTGGG+TGG | - | chr4.2:28796671-28796690 | MS.gene045422:CDS | 55.0% | |
| ! | GCTGGTTCAACAGTAGGTGG+TGG | - | chr4.2:28798528-28798547 | MS.gene045422:intron | 55.0% |
| !! | GTTGTTGGTTCTGGCTGTGG+AGG | - | chr4.2:28798336-28798355 | MS.gene045422:CDS | 55.0% |
| !! | GTTGGTTCTGGCTGTGGAGG+AGG | - | chr4.2:28798339-28798358 | MS.gene045422:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 28796311 | 28800307 | 28796311 | ID=MS.gene045422 |
| chr4.2 | mRNA | 28796311 | 28800307 | 28796311 | ID=MS.gene045422.t1;Parent=MS.gene045422 |
| chr4.2 | exon | 28800047 | 28800307 | 28800047 | ID=MS.gene045422.t1.exon1;Parent=MS.gene045422.t1 |
| chr4.2 | CDS | 28800047 | 28800307 | 28800047 | ID=cds.MS.gene045422.t1;Parent=MS.gene045422.t1 |
| chr4.2 | exon | 28798621 | 28798893 | 28798621 | ID=MS.gene045422.t1.exon2;Parent=MS.gene045422.t1 |
| chr4.2 | CDS | 28798621 | 28798893 | 28798621 | ID=cds.MS.gene045422.t1;Parent=MS.gene045422.t1 |
| chr4.2 | exon | 28797436 | 28798507 | 28797436 | ID=MS.gene045422.t1.exon3;Parent=MS.gene045422.t1 |
| chr4.2 | CDS | 28797436 | 28798507 | 28797436 | ID=cds.MS.gene045422.t1;Parent=MS.gene045422.t1 |
| chr4.2 | exon | 28796311 | 28797017 | 28796311 | ID=MS.gene045422.t1.exon4;Parent=MS.gene045422.t1 |
| chr4.2 | CDS | 28796311 | 28797017 | 28796311 | ID=cds.MS.gene045422.t1;Parent=MS.gene045422.t1 |
| Gene Sequence |
| Protein sequence |
