AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene046411

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene046411.t1 MTR_5g032140 98.192 719 13 0 1 719 1 719 0.0 1444
MS.gene046411.t1 MTR_5g032140 98.159 706 13 0 14 719 1 706 0.0 1417
MS.gene046411.t1 MTR_2g064840 42.553 517 276 8 200 704 495 1002 5.56e-119 381
MS.gene046411.t1 MTR_5g029870 81.159 138 23 1 327 464 4 138 5.05e-67 218
MS.gene046411.t1 MTR_1g099000 27.013 559 306 21 200 683 749 1280 6.27e-30 127
MS.gene046411.t1 MTR_1g098970 27.646 463 236 18 200 588 235 672 6.68e-29 124
MS.gene046411.t1 MTR_1g052535 28.800 250 145 10 191 410 70 316 5.80e-13 72.4
MS.gene046411.t1 MTR_1g052535 28.800 250 145 10 191 410 70 316 1.64e-12 71.2
MS.gene046411.t1 MTR_3g097250 28.333 240 140 7 193 408 70 301 1.77e-12 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene046411.t1 AT4G11160 64.016 742 232 12 7 719 6 741 0.0 897
MS.gene046411.t1 AT4G11160 63.539 746 238 13 1 719 5 743 0.0 894
MS.gene046411.t1 AT4G11160 65.302 513 152 8 38 527 42 551 0.0 637
MS.gene046411.t1 AT1G17220 42.442 516 278 6 200 704 500 1007 1.56e-113 367
MS.gene046411.t1 AT1G76810 26.620 571 312 19 190 683 695 1235 1.99e-28 122
MS.gene046411.t1 AT1G21160 27.655 452 250 17 200 588 496 933 1.54e-26 116
MS.gene046411.t1 AT1G76720 30.451 266 136 7 193 410 654 918 1.79e-21 100
MS.gene046411.t1 AT1G76720 30.451 266 136 7 193 410 621 885 1.94e-21 100
MS.gene046411.t1 AT2G27700 25.108 462 249 16 200 588 35 472 4.18e-20 94.7
MS.gene046411.t1 AT2G27700 25.486 463 247 17 200 588 35 473 5.61e-20 94.4
MS.gene046411.t1 AT5G39900 34.270 178 86 5 205 359 70 239 3.83e-14 76.6
MS.gene046411.t1 AT5G13650 31.646 237 127 10 204 410 86 317 1.46e-13 74.7
MS.gene046411.t1 AT5G13650 31.646 237 127 10 204 410 85 316 1.47e-13 74.7
MS.gene046411.t1 AT5G08650 26.172 256 151 6 182 410 62 306 6.58e-13 72.4
MS.gene046411.t1 AT5G08650 26.378 254 149 6 182 408 62 304 7.51e-13 72.4

Find 197 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCTCCGACTTAATAAATT+TGG 0.122459 5.1:+22336071 None:intergenic
CTCACATACTTCTCCCTCTT+TGG 0.129249 5.1:+22339197 None:intergenic
CCGTGTGATTTACCACTTAT+TGG 0.197956 5.1:-22336445 MS.gene046411:CDS
GGCCTTCTCTATTATCAAAT+TGG 0.252959 5.1:+22336413 None:intergenic
TCACATACTTCTCCCTCTTT+GGG 0.255567 5.1:+22339198 None:intergenic
ACCTGAGTCTCGGGTGTACC+TGG 0.267664 5.1:+22336390 None:intergenic
GGAGATGGGTGGGGATATTC+AGG 0.275437 5.1:-22337844 MS.gene046411:CDS
ACTGCCATTTCAACCCTCTT+TGG 0.276071 5.1:+22337360 None:intergenic
GGGACACAGCTTCAAGTGTT+TGG 0.288016 5.1:+22337979 None:intergenic
GTTGAACTGGCAAAGCGTTC+TGG 0.303622 5.1:-22339062 MS.gene046411:CDS
GGACACAGCTTCAAGTGTTT+GGG 0.304917 5.1:+22337980 None:intergenic
TCAATCTCCACAGGCATTGC+TGG 0.315953 5.1:+22337546 None:intergenic
CAGCAACCATGAGGCTTCTA+AGG 0.317970 5.1:-22336257 MS.gene046411:CDS
CTCTCCGACTTAATAAATTT+GGG 0.320360 5.1:+22336072 None:intergenic
GAAATGGCAGTAATTGTAAA+AGG 0.326721 5.1:-22337348 MS.gene046411:CDS
TTCAGAGGGCTTGCTGTTAG+AGG 0.337080 5.1:-22337865 MS.gene046411:CDS
TCCACGTCGGATTGAGAAAT+AGG 0.351892 5.1:+22336832 None:intergenic
AATTGTAAAAGGAGATGTTC+AGG 0.356652 5.1:-22337337 MS.gene046411:CDS
AGTGAAAGGGAGCAAATCTA+AGG 0.362028 5.1:-22336334 MS.gene046411:CDS
AGAGGAAGCTTTACTCCTTC+AGG 0.368367 5.1:-22337778 MS.gene046411:CDS
GATCTTAAAGCACGATTTGA+TGG 0.369791 5.1:-22337744 MS.gene046411:CDS
TTATTGACTGCAACTACAAC+TGG 0.378111 5.1:+22337936 None:intergenic
AATTTGAAGAGGACAGGCTT+AGG 0.382248 5.1:-22337431 MS.gene046411:CDS
TCAGTATCATCTGAAGTAGT+TGG 0.393486 5.1:+22337390 None:intergenic
GACCTTGTTCGTCTCTTAAG+AGG 0.400893 5.1:-22336212 MS.gene046411:CDS
TATGAACTTTACCAGAGCTT+TGG 0.407075 5.1:-22340000 MS.gene046411:CDS
TTGCCCAGCCACCTGAGTCT+CGG 0.408386 5.1:+22336380 None:intergenic
TGCCCAGCCACCTGAGTCTC+GGG 0.408821 5.1:+22336381 None:intergenic
ACTCCTTCAGGCTGATATGA+TGG 0.413624 5.1:-22337766 MS.gene046411:CDS
GCTGCTTGGGTAAGAGATAT+AGG 0.413831 5.1:+22336757 None:intergenic
AGTAATGCCACCAGCTTCCT+TGG 0.417665 5.1:+22338160 None:intergenic
TGCTGCACCTCTTGCTCGCA+TGG 0.419039 5.1:+22338052 None:intergenic
TAGGTGTGGCTGGTTATAGT+AGG 0.420067 5.1:-22339771 MS.gene046411:CDS
TCAGCATCTAGGTGCCTTTG+TGG 0.425469 5.1:-22338138 MS.gene046411:CDS
GGGCTTGCTGTTAGAGGAGA+TGG 0.426121 5.1:-22337859 MS.gene046411:CDS
CAAGATATTCTCACAACTGT+TGG 0.433729 5.1:-22339020 MS.gene046411:CDS
ATTTGAAGAGGACAGGCTTA+GGG 0.435192 5.1:-22337430 MS.gene046411:CDS
GCTTGCGGTGCATGCATAGT+TGG 0.436862 5.1:-22336799 MS.gene046411:CDS
CCTGAGTCTCGGGTGTACCT+GGG 0.437418 5.1:+22336391 None:intergenic
AGGCATGACCCTTGTTGAAC+TGG 0.440050 5.1:-22339075 MS.gene046411:CDS
TTTGTGGTGGGCATGTCATC+AGG 0.441533 5.1:-22338122 MS.gene046411:CDS
TGTGGACAGCATGTGGTTGT+AGG 0.444121 5.1:-22337633 MS.gene046411:CDS
GGGACATGTGGAGCGTCAAC+AGG 0.446013 5.1:+22339152 None:intergenic
TGCTGTTAGAGGAGATGGGT+GGG 0.449295 5.1:-22337854 MS.gene046411:CDS
ACACCCGAGACTCAGGTGGC+TGG 0.449642 5.1:-22336384 MS.gene046411:CDS
AGAGTTTGAGCCTCTCAGTA+TGG 0.451008 5.1:-22338982 MS.gene046411:CDS
AGTGCTTAGAACAAGTAGTT+AGG 0.451043 5.1:-22336098 MS.gene046411:CDS
TGACCCATCACTGTTACAAC+TGG 0.451970 5.1:+22338239 None:intergenic
CTGAATATCTTTGAAGTGAA+AGG 0.453512 5.1:-22336348 MS.gene046411:CDS
TTTGCTGAAGCTTGGAAAGA+AGG 0.454649 5.1:-22340186 MS.gene046411:intron
ACTAGCACGAGTTGCTGCTT+GGG 0.456407 5.1:+22336744 None:intergenic
CGGGCTAGAATGCTTAGTTC+TGG 0.456720 5.1:-22337465 MS.gene046411:CDS
GTGGAGATTGAAGGGCTTCG+AGG 0.458149 5.1:-22337534 MS.gene046411:CDS
CACTCATGCATAGGTGTGGC+TGG 0.459850 5.1:-22339781 MS.gene046411:CDS
TACTAGCACGAGTTGCTGCT+TGG 0.463126 5.1:+22336743 None:intergenic
AAAAGAAATTTGAAGAGGAC+AGG 0.464360 5.1:-22337437 MS.gene046411:CDS
TCCATGCTAGCTCACAAGTC+TGG 0.464520 5.1:-22339253 MS.gene046411:CDS
AGGGAGAAGTATGTGAGAAA+AGG 0.466796 5.1:-22339191 MS.gene046411:CDS
GTCTCTTAAGAGGGAGAAGC+AGG 0.467286 5.1:-22336202 MS.gene046411:CDS
GCTGGTTGCAAAGTTGTTGA+AGG 0.470555 5.1:-22336294 MS.gene046411:CDS
CACATACTTCTCCCTCTTTG+GGG 0.473207 5.1:+22339199 None:intergenic
GGTTCCAAAGAGGGTTGAAA+TGG 0.481754 5.1:-22337364 MS.gene046411:CDS
ACCAGACTTGTGAGCTAGCA+TGG 0.483849 5.1:+22339252 None:intergenic
TCATTTCTGTTGCAGGAAGT+TGG 0.487950 5.1:-22338317 MS.gene046411:intron
CACCCGAGACTCAGGTGGCT+GGG 0.489836 5.1:-22336383 MS.gene046411:CDS
CAGTATCATCTGAAGTAGTT+GGG 0.490528 5.1:+22337391 None:intergenic
CTTCGAGGGCTGCCAATGGC+CGG 0.490970 5.1:-22337519 MS.gene046411:CDS
ATGGCGGCTTTGCTGAAGCT+TGG 0.492064 5.1:-22340194 MS.gene046411:CDS
AAGTTGGCGTCAATGTTAAG+AGG 0.492222 5.1:-22338301 MS.gene046411:CDS
TATTTCTGAGCTTGCTGCAA+TGG 0.496708 5.1:-22338958 MS.gene046411:intron
TTGGTTGCAGTGACTTTACA+AGG 0.501046 5.1:+22339131 None:intergenic
GCATCTAGGTGCCTTTGTGG+TGG 0.501908 5.1:-22338135 MS.gene046411:CDS
CCCAGGTACACCCGAGACTC+AGG 0.503358 5.1:-22336391 MS.gene046411:CDS
AATGTTGTCCATGTTGGCGT+GGG 0.504531 5.1:-22336856 MS.gene046411:CDS
TGATGCTGCAGCCAAAGCTC+TGG 0.507742 5.1:+22339989 None:intergenic
ATGCACCGCAAGCCTGTGCT+AGG 0.507826 5.1:+22336809 None:intergenic
TGTTGTTCATTCTGAGGAGC+GGG 0.508874 5.1:-22337484 MS.gene046411:CDS
TGACAAAGGACGGGGTCCAT+TGG 0.510063 5.1:-22337688 MS.gene046411:CDS
ATCACATTTCTCGACACTCC+TGG 0.512405 5.1:-22338092 MS.gene046411:CDS
TGAATATCTTTGAAGTGAAA+GGG 0.513439 5.1:-22336347 MS.gene046411:CDS
TCAGTGGCAGCCAAGGAAGC+TGG 0.515550 5.1:-22338170 MS.gene046411:CDS
GACAACTTTGAATAGTCCTC+AGG 0.516512 5.1:-22337286 MS.gene046411:intron
CATCTAGGTGCCTTTGTGGT+GGG 0.518300 5.1:-22338134 MS.gene046411:CDS
TCTGTGAATGTTGTCCATGT+TGG 0.519196 5.1:-22336862 MS.gene046411:CDS
GCAATGCCTGTGGAGATTGA+AGG 0.520519 5.1:-22337543 MS.gene046411:CDS
TTGCTGTTAGAGGAGATGGG+TGG 0.521268 5.1:-22337855 MS.gene046411:CDS
AGCAACTCGTGCTAGTATCA+AGG 0.524569 5.1:-22336737 MS.gene046411:intron
AAAACGATAGAAATATTTGA+AGG 0.527056 5.1:-22339095 MS.gene046411:CDS
GCACTAAATGCAGCGTGACC+AGG 0.528840 5.1:+22338074 None:intergenic
AGGGCTATTAAAGATGCAGC+AGG 0.529509 5.1:-22337591 MS.gene046411:CDS
TGGAGATTGAAGGGCTTCGA+GGG 0.531700 5.1:-22337533 MS.gene046411:CDS
CGAAGCCCTTCAATCTCCAC+AGG 0.532610 5.1:+22337537 None:intergenic
GCATCATGTAGGCATGTGGT+AGG 0.533926 5.1:-22339972 MS.gene046411:CDS
TAAGAGGGAGAAGCAGGATG+TGG 0.534191 5.1:-22336196 MS.gene046411:CDS
GCATCAGCAAGATGCATGGC+TGG 0.536350 5.1:-22339909 MS.gene046411:intron
GAAGCCCAAATTTATTAAGT+CGG 0.536909 5.1:-22336076 MS.gene046411:CDS
ACCACTCCTTAGAAGCCTCA+TGG 0.539540 5.1:+22336251 None:intergenic
TCCTCCAGTTGTAACAGTGA+TGG 0.540721 5.1:-22338243 MS.gene046411:CDS
TGGCCACGTCTTCCAATAAG+TGG 0.540900 5.1:+22336433 None:intergenic
GCTTCTAAGGAGTGGTGAAA+TGG 0.543450 5.1:-22336244 MS.gene046411:CDS
AGCAAGACTTGACAAAGGAC+GGG 0.546869 5.1:-22337697 MS.gene046411:CDS
TGCCACTGACGTTTGACGCA+AGG 0.548783 5.1:+22338184 None:intergenic
AGGGCTTCGAGGGCTGCCAA+TGG 0.550201 5.1:-22337523 MS.gene046411:CDS
AGGTGTGGCTGGTTATAGTA+GGG 0.550500 5.1:-22339770 MS.gene046411:CDS
TTTAGTGCCATGCGAGCAAG+AGG 0.552994 5.1:-22338059 MS.gene046411:CDS
AAGCAAGACTTGACAAAGGA+CGG 0.557705 5.1:-22337698 MS.gene046411:CDS
TCAAACGTCAGTGGCAGCCA+AGG 0.557842 5.1:-22338177 MS.gene046411:CDS
GGACTAAAGAATGTGGAATA+CGG 0.557860 5.1:-22339747 MS.gene046411:intron
AAAACTGCAGCTTGCTTCAG+AGG 0.558541 5.1:-22337880 MS.gene046411:CDS
GGTGGCATTACTCAGCATCT+AGG 0.559213 5.1:-22338149 MS.gene046411:CDS
TGTGGTTGTAGGCTCGCAGT+GGG 0.559390 5.1:-22337622 MS.gene046411:CDS
GTGGAGCGTCAACAGGAGGC+TGG 0.559395 5.1:+22339159 None:intergenic
ATGACATCGTCACCGGCCAT+TGG 0.561870 5.1:+22337507 None:intergenic
GGACCTGATGTGAAAATAGC+TGG 0.562195 5.1:-22336312 MS.gene046411:CDS
ACCTTGTTCGTCTCTTAAGA+GGG 0.563673 5.1:-22336211 MS.gene046411:CDS
TGTCATTGTTGTTCATTCTG+AGG 0.565978 5.1:-22337490 MS.gene046411:CDS
CAATGCCTGTGGAGATTGAA+GGG 0.566706 5.1:-22337542 MS.gene046411:CDS
AAGGCAGGAACTCTAGTTTG+TGG 0.566743 5.1:-22337651 MS.gene046411:CDS
TCAACCACATATGCTTGAGC+AGG 0.566940 5.1:+22337720 None:intergenic
ATTGTAAAAGGAGATGTTCA+GGG 0.570554 5.1:-22337336 MS.gene046411:CDS
CCTCCAGTTGTAACAGTGAT+GGG 0.572114 5.1:-22338242 MS.gene046411:CDS
GATGTGGATTCTGTGAAGAA+AGG 0.574209 5.1:-22336180 MS.gene046411:CDS
GCTGTTAGAGGAGATGGGTG+GGG 0.576180 5.1:-22337853 MS.gene046411:CDS
AACAACAATGACATCGTCAC+CGG 0.576261 5.1:+22337500 None:intergenic
CTAGTTGTTGCTGCAGATGA+CGG 0.576535 5.1:-22338011 MS.gene046411:CDS
TTGATAATAGAGAAGGCCCC+AGG 0.576931 5.1:-22336408 MS.gene046411:CDS
TACTGAGGAGGTTCCAAAGA+GGG 0.576993 5.1:-22337373 MS.gene046411:CDS
AAGAGGTTACATTCAACTGA+AGG 0.577737 5.1:-22338284 MS.gene046411:CDS
CTTTGGCTGCAGCATCATGT+AGG 0.578766 5.1:-22339983 MS.gene046411:CDS
ATCCGACGTGGACCTAGCAC+AGG 0.580355 5.1:-22336821 MS.gene046411:CDS
GAATGTTGTCCATGTTGGCG+TGG 0.582983 5.1:-22336857 MS.gene046411:CDS
ACATACTTCTCCCTCTTTGG+GGG 0.583980 5.1:+22339200 None:intergenic
GGCTTGCTGTTAGAGGAGAT+GGG 0.584783 5.1:-22337858 MS.gene046411:CDS
TCAAGAAGTGATGCAGCGTA+TGG 0.585039 5.1:-22339230 MS.gene046411:CDS
TGGTCCTGCTCAAGCATATG+TGG 0.587486 5.1:-22337724 MS.gene046411:CDS
AGTGGTGAAATGGTGTTTGA+AGG 0.587901 5.1:-22336234 MS.gene046411:CDS
GGCCAATTTGATAATAGAGA+AGG 0.588540 5.1:-22336415 MS.gene046411:CDS
AACGCTTTGCCAGTTCAACA+AGG 0.589366 5.1:+22339066 None:intergenic
ATGTGGTTGTAGGCTCGCAG+TGG 0.591331 5.1:-22337623 MS.gene046411:CDS
AAACTGCAGCTTGCTTCAGA+GGG 0.591601 5.1:-22337879 MS.gene046411:CDS
CTGAGTCTCGGGTGTACCTG+GGG 0.593935 5.1:+22336392 None:intergenic
GTGACTACTATAGTGAAGGC+AGG 0.594123 5.1:-22337666 MS.gene046411:CDS
AAATTTATTAAGTCGGAGAG+TGG 0.594592 5.1:-22336069 MS.gene046411:CDS
TTGTTGTTCATTCTGAGGAG+CGG 0.596000 5.1:-22337485 MS.gene046411:CDS
GAAGGAGTAAAGCTTCCTCT+AGG 0.596889 5.1:+22337781 None:intergenic
AAATAGGCCCCACGCCAACA+TGG 0.597607 5.1:+22336848 None:intergenic
TTGACGCAAGGCATCAAGAA+GGG 0.602671 5.1:+22338196 None:intergenic
CCCATCACTGTTACAACTGG+AGG 0.604246 5.1:+22338242 None:intergenic
TTACCACTTATTGGAAGACG+TGG 0.608331 5.1:-22336436 MS.gene046411:CDS
GATCCATCATATCAGCCTGA+AGG 0.609133 5.1:+22337763 None:intergenic
CCAATAAGTGGTAAATCACA+CGG 0.614579 5.1:+22336445 None:intergenic
GTCAATAAATGTGATAAACC+AGG 0.615284 5.1:-22337921 MS.gene046411:CDS
TTTGAAGAGGACAGGCTTAG+GGG 0.616568 5.1:-22337429 MS.gene046411:CDS
TTCACTATAGTAGTCACCAA+TGG 0.618438 5.1:+22337672 None:intergenic
TTTGACGCAAGGCATCAAGA+AGG 0.619099 5.1:+22338195 None:intergenic
ACTGTTACAACTGGAGGACG+TGG 0.619466 5.1:+22338248 None:intergenic
CTAGAATGCTTAGTTCTGGT+AGG 0.622551 5.1:-22337461 MS.gene046411:CDS
TTCATCAATCACTCATGCAT+AGG 0.627549 5.1:-22339790 MS.gene046411:CDS
ATTGGTGACTACTATAGTGA+AGG 0.629654 5.1:-22337670 MS.gene046411:CDS
GTGATGGGTCATGTTGATCA+CGG 0.630061 5.1:-22338227 MS.gene046411:CDS
GTGAAAGGGAGCAAATCTAA+GGG 0.630238 5.1:-22336333 MS.gene046411:CDS
ACCATGAGGCTTCTAAGGAG+TGG 0.630459 5.1:-22336252 MS.gene046411:CDS
GACACAGCTTCAAGTGTTTG+GGG 0.635718 5.1:+22337981 None:intergenic
GTGACTTTACAAGGGACATG+TGG 0.635985 5.1:+22339140 None:intergenic
CATCATGTAGGCATGTGGTA+GGG 0.636284 5.1:-22339971 MS.gene046411:CDS
GTGGCAGCCAAGGAAGCTGG+TGG 0.636567 5.1:-22338167 MS.gene046411:CDS
AGCAACTCCAGCAATGCCTG+TGG 0.638181 5.1:-22337553 MS.gene046411:CDS
TGCCTTGCGTCAAACGTCAG+TGG 0.640297 5.1:-22338186 MS.gene046411:CDS
TCTAGTTTGTGGACAGCATG+TGG 0.640880 5.1:-22337640 MS.gene046411:CDS
CAATCACTCATGCATAGGTG+TGG 0.642295 5.1:-22339785 MS.gene046411:CDS
GCCTATTTCTCAATCCGACG+TGG 0.644268 5.1:-22336833 MS.gene046411:CDS
GTGAAGAAAGGAAATGAGTG+TGG 0.647644 5.1:-22336168 MS.gene046411:CDS
ACGCTTTGCCAGTTCAACAA+GGG 0.649253 5.1:+22339067 None:intergenic
TACTTCAGATGATACTGAGG+AGG 0.649683 5.1:-22337385 MS.gene046411:CDS
GTGTGGCTGGTTATAGTAGG+GGG 0.652719 5.1:-22339768 MS.gene046411:CDS
ACATGTGGAGCGTCAACAGG+AGG 0.655846 5.1:+22339155 None:intergenic
AACTACTTCAGATGATACTG+AGG 0.662017 5.1:-22337388 MS.gene046411:CDS
TGATGACATGCCCACCACAA+AGG 0.668029 5.1:+22338124 None:intergenic
GCAAGACTTGACAAAGGACG+GGG 0.668444 5.1:-22337696 MS.gene046411:CDS
TCCCTCTTAAGAGACGAACA+AGG 0.676356 5.1:+22336210 None:intergenic
AGGTACACCCGAGACTCAGG+TGG 0.677615 5.1:-22336388 MS.gene046411:CDS
GTGGACCTAGCACAGGCTTG+CGG 0.681130 5.1:-22336814 MS.gene046411:CDS
GGTGTGGCTGGTTATAGTAG+GGG 0.682056 5.1:-22339769 MS.gene046411:CDS
GACTGGACTGGATAACCTAG+AGG 0.686970 5.1:-22337796 MS.gene046411:CDS
TGAACAGGACAGCAACCATG+AGG 0.689237 5.1:-22336266 MS.gene046411:CDS
TGGTTGCAGTGACTTTACAA+GGG 0.689581 5.1:+22339132 None:intergenic
TTATGCATCAGCAAGATGCA+TGG 0.690151 5.1:-22339913 MS.gene046411:CDS
GCTTGGGTAAGAGATATAGG+TGG 0.690336 5.1:+22336760 None:intergenic
TGCAGCATCATGTAGGCATG+TGG 0.692322 5.1:-22339976 MS.gene046411:CDS
AGCCTGTGCTAGGTCCACGT+CGG 0.697377 5.1:+22336819 None:intergenic
ATGTTGTCCATGTTGGCGTG+GGG 0.699834 5.1:-22336855 MS.gene046411:CDS
GGGCTATTAAAGATGCAGCA+GGG 0.703729 5.1:-22337590 MS.gene046411:CDS
TCAGAAATATCCATACTGAG+AGG 0.707747 5.1:+22338972 None:intergenic
GTTGAAGCAAGACTTGACAA+AGG 0.724961 5.1:-22337702 MS.gene046411:CDS
ATACTGAGGAGGTTCCAAAG+AGG 0.728916 5.1:-22337374 MS.gene046411:CDS
CTATTAAAGATGCAGCAGGG+AGG 0.743526 5.1:-22337587 MS.gene046411:CDS
GTGGTTGTAGGCTCGCAGTG+GGG 0.772193 5.1:-22337621 MS.gene046411:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGGCAAAAAAAAAAAAAAA+AGG + chr5.1:22337774-22337793 None:intergenic 15.0%
!! TGGTTATTATAACTATAATA+TGG - chr5.1:22338985-22339004 MS.gene046411:CDS 15.0%
!! TTTATTTATATCTCAACATT+TGG + chr5.1:22339268-22339287 None:intergenic 15.0%
!!! ATTTAGTCTTTAAAATTGTA+AGG + chr5.1:22339687-22339706 None:intergenic 15.0%
!!! TACAATTTTAAAGACTAAAT+TGG - chr5.1:22339687-22339706 MS.gene046411:intron 15.0%
!!! TTTACACAATTTAAAATGAA+AGG + chr5.1:22336110-22336129 None:intergenic 15.0%
!! AAAACGATAGAAATATTTGA+AGG - chr5.1:22337146-22337165 MS.gene046411:intron 20.0%
!! ACAAAACAGTACATAAATTA+CGG + chr5.1:22336695-22336714 None:intergenic 20.0%
!! ACAAGTAAATATAAAACAGT+AGG - chr5.1:22339116-22339135 MS.gene046411:CDS 20.0%
!! AGCTATATACACTTTATTAT+AGG + chr5.1:22336171-22336190 None:intergenic 20.0%
!! GCTAATAATACTGTAATAAA+TGG - chr5.1:22336783-22336802 MS.gene046411:CDS 20.0%
!!! AATATTTCTATCGTTTTATC+AGG + chr5.1:22337143-22337162 None:intergenic 20.0%
!!! GACTGAAAATTTTCAAATTT+AGG + chr5.1:22339624-22339643 None:intergenic 20.0%
!!! TAATTAGTTTTGTTTTACGT+TGG - chr5.1:22336957-22336976 MS.gene046411:intron 20.0%
!!! TTTTTTTTTTGCCTTATTTC+TGG - chr5.1:22337779-22337798 MS.gene046411:CDS 20.0%
! AATAAGTAATCGATAGTACT+AGG - chr5.1:22337666-22337685 MS.gene046411:CDS 25.0%
! AATATGCATAGGAAAGTAAA+AGG - chr5.1:22337641-22337660 MS.gene046411:CDS 25.0%
! AATTGTTAGCATTACAGTTT+AGG - chr5.1:22336553-22336572 MS.gene046411:intron 25.0%
! ACAACAGATAGTGTATTAAT+CGG - chr5.1:22339076-22339095 MS.gene046411:CDS 25.0%
! ACAGAAAAAAAAAGGGAAAA+AGG + chr5.1:22339209-22339228 None:intergenic 25.0%
! AGATATGCATAAAATTACAG+AGG - chr5.1:22336648-22336667 MS.gene046411:intron 25.0%
! AGTGACATTAGTTGAAAATT+TGG - chr5.1:22336886-22336905 MS.gene046411:intron 25.0%
! ATATGCATAGGAAAGTAAAA+GGG - chr5.1:22337642-22337661 MS.gene046411:CDS 25.0%
! ATGCATCAACAGAAAAAAAA+AGG + chr5.1:22339217-22339236 None:intergenic 25.0%
! ATTGCAGCATTATTATACTT+GGG - chr5.1:22337738-22337757 MS.gene046411:CDS 25.0%
! ATTTCAATTTGATATCCGTT+TGG - chr5.1:22339749-22339768 MS.gene046411:CDS 25.0%
! CATTCTGTAATTTCATTGTT+AGG - chr5.1:22339354-22339373 MS.gene046411:intron 25.0%
! CTAACAATGAAATTACAGAA+TGG + chr5.1:22339356-22339375 None:intergenic 25.0%
! CTGCATTCAGATAATAAAAA+GGG + chr5.1:22336213-22336232 None:intergenic 25.0%
! GATATGCATAAAATTACAGA+GGG - chr5.1:22336649-22336668 MS.gene046411:intron 25.0%
! GATGTTAAATCAGTGAATAT+AGG - chr5.1:22337328-22337347 MS.gene046411:CDS 25.0%
! TAGGAAAAAGAAATTTGAAG+AGG - chr5.1:22338799-22338818 MS.gene046411:intron 25.0%
! TCATGTAGTTCAAAACAAAA+AGG + chr5.1:22337852-22337871 None:intergenic 25.0%
! TCTGCATTCAGATAATAAAA+AGG + chr5.1:22336214-22336233 None:intergenic 25.0%
! TGCATCAACAGAAAAAAAAA+GGG + chr5.1:22339216-22339235 None:intergenic 25.0%
!!! AATGTTTTGATGGAAATCAA+TGG - chr5.1:22337540-22337559 MS.gene046411:CDS 25.0%
!!! CTTTTCCTTAAATTGATAGT+TGG - chr5.1:22337576-22337595 MS.gene046411:CDS 25.0%
!!! GAACTACATGATGATTTTTT+AGG - chr5.1:22337861-22337880 MS.gene046411:CDS 25.0%
!!! TGAATATCTTTGAAGTGAAA+GGG - chr5.1:22339894-22339913 MS.gene046411:intron 25.0%
!!! TTTTTAGTTGCTTGAGATAA+AGG - chr5.1:22337509-22337528 MS.gene046411:CDS 25.0%
AAAAGAAATTTGAAGAGGAC+AGG - chr5.1:22338804-22338823 MS.gene046411:intron 30.0%
AAAGGCTAACAAACAAGTAT+TGG + chr5.1:22337376-22337395 None:intergenic 30.0%
AAATTTATTAAGTCGGAGAG+TGG - chr5.1:22340172-22340191 MS.gene046411:intron 30.0%
AACATCATCTATGACTAAGA+AGG + chr5.1:22337314-22337333 None:intergenic 30.0%
AATACACTATCTGTTGTTGA+CGG + chr5.1:22339073-22339092 None:intergenic 30.0%
AATTGTAAAAGGAGATGTTC+AGG - chr5.1:22338904-22338923 MS.gene046411:intron 30.0%
AATTTGATATCCGTTTGGTT+TGG - chr5.1:22339754-22339773 MS.gene046411:CDS 30.0%
ACTCTCCGACTTAATAAATT+TGG + chr5.1:22340173-22340192 None:intergenic 30.0%
AGTATACAATAAACAAGTGC+TGG + chr5.1:22336393-22336412 None:intergenic 30.0%
AGTTGACGTCTTATAATCTT+AGG + chr5.1:22339568-22339587 None:intergenic 30.0%
ATATCTCAACATTTGGACAA+AGG + chr5.1:22339261-22339280 None:intergenic 30.0%
ATTACAGTTTAGGTGGTTTA+AGG - chr5.1:22336563-22336582 MS.gene046411:intron 30.0%
ATTGTAAAAGGAGATGTTCA+GGG - chr5.1:22338905-22338924 MS.gene046411:intron 30.0%
CAATGCCAACTATCAATTTA+AGG + chr5.1:22337584-22337603 None:intergenic 30.0%
CATTGCAGCATTATTATACT+TGG - chr5.1:22337737-22337756 MS.gene046411:CDS 30.0%
CTCTCCGACTTAATAAATTT+GGG + chr5.1:22340172-22340191 None:intergenic 30.0%
GAAAACAAATATCCACAAAC+AGG + chr5.1:22337889-22337908 None:intergenic 30.0%
GAAATGGCAGTAATTGTAAA+AGG - chr5.1:22338893-22338912 MS.gene046411:intron 30.0%
GAAGCCCAAATTTATTAAGT+CGG - chr5.1:22340165-22340184 MS.gene046411:intron 30.0%
GGTACTTATAAGTAAAAAGC+TGG - chr5.1:22336907-22336926 MS.gene046411:intron 30.0%
GTATAATAATGCTGCAATGA+TGG + chr5.1:22337736-22337755 None:intergenic 30.0%
GTCAATAAATGTGATAAACC+AGG - chr5.1:22338320-22338339 MS.gene046411:intron 30.0%
GTTGACGTCTTATAATCTTA+GGG + chr5.1:22339567-22339586 None:intergenic 30.0%
TAAGATCACATTAATCAGCA+TGG - chr5.1:22339169-22339188 MS.gene046411:CDS 30.0%
TGTAGTTCAAAACAAAAAGG+AGG + chr5.1:22337849-22337868 None:intergenic 30.0%
! AACAAGCTGTCATTTACAAA+TGG + chr5.1:22337401-22337420 None:intergenic 30.0%
! AACTGTTGTGATTTTCAGAT+TGG - chr5.1:22340109-22340128 MS.gene046411:intron 30.0%
! AATTTGTTCATTTCTGTTGC+AGG - chr5.1:22337917-22337936 MS.gene046411:CDS 30.0%
! ACAAGCTGTCATTTACAAAT+GGG + chr5.1:22337400-22337419 None:intergenic 30.0%
! CAATTTAAAATGAAAGGAGC+TGG + chr5.1:22336104-22336123 None:intergenic 30.0%
! CGTTTTATCAGGATTAGATT+TGG + chr5.1:22337132-22337151 None:intergenic 30.0%
! CTTAAATTGATAGTTGGCAT+TGG - chr5.1:22337582-22337601 MS.gene046411:CDS 30.0%
! TGTCATTTACAAATGGGAAA+AGG + chr5.1:22337394-22337413 None:intergenic 30.0%
! TTTGTAAATGACAGCTTGTT+AGG - chr5.1:22337401-22337420 MS.gene046411:CDS 30.0%
!! AATCGCACAAATTTTAGCAT+TGG + chr5.1:22336850-22336869 None:intergenic 30.0%
!! AGTTGATAGGTATACTACAT+CGG - chr5.1:22336716-22336735 MS.gene046411:intron 30.0%
!! CTGAATATCTTTGAAGTGAA+AGG - chr5.1:22339893-22339912 MS.gene046411:intron 30.0%
!! TACATTAGCTGATTTTGCAT+GGG + chr5.1:22338285-22338304 None:intergenic 30.0%
!! TTGTAAATGACAGCTTGTTA+GGG - chr5.1:22337402-22337421 MS.gene046411:CDS 30.0%
!!! ATTTTTTAGGTTCCTGTTTG+TGG - chr5.1:22337874-22337893 MS.gene046411:CDS 30.0%
!!! TGAATTTTTCAAGCATCTCT+CGG - chr5.1:22336809-22336828 MS.gene046411:CDS 30.0%
AAAATTTGTGCGATTGCACA+TGG - chr5.1:22336855-22336874 MS.gene046411:CDS 35.0%
AACTACTTCAGATGATACTG+AGG - chr5.1:22338853-22338872 MS.gene046411:intron 35.0%
AAGAGGTTACATTCAACTGA+AGG - chr5.1:22337957-22337976 MS.gene046411:CDS 35.0%
AATACTCCTGATTGGTAGAT+TGG - chr5.1:22336743-22336762 MS.gene046411:CDS 35.0%
AGTGCTTAGAACAAGTAGTT+AGG - chr5.1:22340143-22340162 MS.gene046411:intron 35.0%
AGTTCAAAACAAAAAGGAGG+AGG + chr5.1:22337846-22337865 None:intergenic 35.0%
ATAAAATTACAGAGGGATGG+GGG - chr5.1:22336656-22336675 MS.gene046411:intron 35.0%
ATACTCCTGATTGGTAGATT+GGG - chr5.1:22336744-22336763 MS.gene046411:CDS 35.0%
ATATTGTGCCTTACGACAAA+TGG + chr5.1:22337626-22337645 None:intergenic 35.0%
ATCAGTGATTACTCAGGAAA+AGG + chr5.1:22339539-22339558 None:intergenic 35.0%
CAAGATATTCTCACAACTGT+TGG - chr5.1:22337221-22337240 MS.gene046411:intron 35.0%
CATAAAATTACAGAGGGATG+GGG - chr5.1:22336655-22336674 MS.gene046411:intron 35.0%
CCAATAAGTGGTAAATCACA+CGG + chr5.1:22339799-22339818 None:intergenic 35.0%
GACTAAATCAGTGATTACTC+AGG + chr5.1:22339545-22339564 None:intergenic 35.0%
GAGAGATGCTTGAAAAATTC+AGG + chr5.1:22336810-22336829 None:intergenic 35.0%
GAGTCAATGATCCAGAAATA+AGG + chr5.1:22337793-22337812 None:intergenic 35.0%
GATCTTAAAGCACGATTTGA+TGG - chr5.1:22338497-22338516 MS.gene046411:intron 35.0%
GCATAAAATTACAGAGGGAT+GGG - chr5.1:22336654-22336673 MS.gene046411:intron 35.0%
GGACTAAAGAATGTGGAATA+CGG - chr5.1:22336494-22336513 MS.gene046411:intron 35.0%
GGCCTTCTCTATTATCAAAT+TGG + chr5.1:22339831-22339850 None:intergenic 35.0%
GTTCAAAACAAAAAGGAGGA+GGG + chr5.1:22337845-22337864 None:intergenic 35.0%
TAATAACCATCACATACCTG+AGG + chr5.1:22338974-22338993 None:intergenic 35.0%
TATGAACTTTACCAGAGCTT+TGG - chr5.1:22336241-22336260 MS.gene046411:CDS 35.0%
TATTGTGCCTTACGACAAAT+GGG + chr5.1:22337625-22337644 None:intergenic 35.0%
TCAGAAATATCCATACTGAG+AGG + chr5.1:22337272-22337291 None:intergenic 35.0%
TGATTGATGAAATCTGCATC+AGG + chr5.1:22336442-22336461 None:intergenic 35.0%
TGCATAAAATTACAGAGGGA+TGG - chr5.1:22336653-22336672 MS.gene046411:intron 35.0%
TGTTAGCATTACAGTTTAGG+TGG - chr5.1:22336556-22336575 MS.gene046411:intron 35.0%
TTAAGGATGACAGCATCATT+TGG - chr5.1:22336580-22336599 MS.gene046411:intron 35.0%
TTCAAAACAAAAAGGAGGAG+GGG + chr5.1:22337844-22337863 None:intergenic 35.0%
TTCACTATAGTAGTCACCAA+TGG + chr5.1:22338572-22338591 None:intergenic 35.0%
TTCATCAATCACTCATGCAT+AGG - chr5.1:22336451-22336470 MS.gene046411:CDS 35.0%
! ATTGGTGACTACTATAGTGA+AGG - chr5.1:22338571-22338590 MS.gene046411:intron 35.0%
! CAGTATCATCTGAAGTAGTT+GGG + chr5.1:22338853-22338872 None:intergenic 35.0%
! GGCCAATTTGATAATAGAGA+AGG - chr5.1:22339826-22339845 MS.gene046411:intron 35.0%
! TCAGTATCATCTGAAGTAGT+TGG + chr5.1:22338854-22338873 None:intergenic 35.0%
! TGTCATTGTTGTTCATTCTG+AGG - chr5.1:22338751-22338770 MS.gene046411:intron 35.0%
! TTATTGACTGCAACTACAAC+TGG + chr5.1:22338308-22338327 None:intergenic 35.0%
!! GTACATTAGCTGATTTTGCA+TGG + chr5.1:22338286-22338305 None:intergenic 35.0%
!! TTGTTGAAGGTTTTGTGAAC+AGG - chr5.1:22339960-22339979 MS.gene046411:CDS 35.0%
!!! AGCTGCAGTTTTACTTTTTC+AGG + chr5.1:22338353-22338372 None:intergenic 35.0%
!!! GTACTGTTTTGTGAGTTGAT+AGG - chr5.1:22336703-22336722 MS.gene046411:intron 35.0%
!!! TAGTTTTGTTTTACGTTGGC+AGG - chr5.1:22336961-22336980 MS.gene046411:intron 35.0%
AAATAAAACCCCCTGCAACA+TGG + chr5.1:22336146-22336165 None:intergenic 40.0%
AACAACAATGACATCGTCAC+CGG + chr5.1:22338744-22338763 None:intergenic 40.0%
AAGCAAGACTTGACAAAGGA+CGG - chr5.1:22338543-22338562 MS.gene046411:intron 40.0%
AAGTTGGCGTCAATGTTAAG+AGG - chr5.1:22337940-22337959 MS.gene046411:CDS 40.0%
AATAGTCCTCAGGTATGTGA+TGG - chr5.1:22338965-22338984 MS.gene046411:CDS 40.0%
AATTTGAAGAGGACAGGCTT+AGG - chr5.1:22338810-22338829 MS.gene046411:intron 40.0%
ACAATTATCCATGTTGCAGG+GGG - chr5.1:22336135-22336154 MS.gene046411:CDS 40.0%
ACCACAATTATCCATGTTGC+AGG - chr5.1:22336132-22336151 MS.gene046411:CDS 40.0%
ACCTACCAAACCAAACCAAA+CGG + chr5.1:22339767-22339786 None:intergenic 40.0%
AGTGAAAGGGAGCAAATCTA+AGG - chr5.1:22339907-22339926 MS.gene046411:intron 40.0%
AGTGGTGAAATGGTGTTTGA+AGG - chr5.1:22340007-22340026 MS.gene046411:CDS 40.0%
ATTGTGCCTTACGACAAATG+GGG + chr5.1:22337624-22337643 None:intergenic 40.0%
ATTTGAAGAGGACAGGCTTA+GGG - chr5.1:22338811-22338830 MS.gene046411:intron 40.0%
CACAATTATCCATGTTGCAG+GGG - chr5.1:22336134-22336153 MS.gene046411:CDS 40.0%
CCACAATTATCCATGTTGCA+GGG - chr5.1:22336133-22336152 MS.gene046411:CDS 40.0%
CCGTGTGATTTACCACTTAT+TGG - chr5.1:22339796-22339815 MS.gene046411:intron 40.0%
GACAACTTTGAATAGTCCTC+AGG - chr5.1:22338955-22338974 MS.gene046411:intron 40.0%
GATGTGGATTCTGTGAAGAA+AGG - chr5.1:22340061-22340080 MS.gene046411:intron 40.0%
GTGAAAGGGAGCAAATCTAA+GGG - chr5.1:22339908-22339927 MS.gene046411:intron 40.0%
GTGAAGAAAGGAAATGAGTG+TGG - chr5.1:22340073-22340092 MS.gene046411:intron 40.0%
GTTGAAGCAAGACTTGACAA+AGG - chr5.1:22338539-22338558 MS.gene046411:intron 40.0%
TACTTCAGATGATACTGAGG+AGG - chr5.1:22338856-22338875 MS.gene046411:intron 40.0%
TCAAAACAAAAAGGAGGAGG+GGG + chr5.1:22337843-22337862 None:intergenic 40.0%
TCACATACTTCTCCCTCTTT+GGG + chr5.1:22337046-22337065 None:intergenic 40.0%
TCATTTCTGTTGCAGGAAGT+TGG - chr5.1:22337924-22337943 MS.gene046411:CDS 40.0%
TCGGTGATAATACTCCTGAT+TGG - chr5.1:22336735-22336754 MS.gene046411:intron 40.0%
TCGTAAGGCACAATATGCAT+AGG - chr5.1:22337630-22337649 MS.gene046411:CDS 40.0%
TCTGTGAATGTTGTCCATGT+TGG - chr5.1:22339379-22339398 MS.gene046411:intron 40.0%
TGGTTGCAGTGACTTTACAA+GGG + chr5.1:22337112-22337131 None:intergenic 40.0%
TTACCACTTATTGGAAGACG+TGG - chr5.1:22339805-22339824 MS.gene046411:intron 40.0%
TTATGCATCAGCAAGATGCA+TGG - chr5.1:22336328-22336347 MS.gene046411:CDS 40.0%
TTGGTTGCAGTGACTTTACA+AGG + chr5.1:22337113-22337132 None:intergenic 40.0%
TTGTCTCATTCTGCTTCACT+TGG - chr5.1:22337454-22337473 MS.gene046411:CDS 40.0%
TTTGCTGAAGCTTGGAAAGA+AGG - chr5.1:22336055-22336074 MS.gene046411:CDS 40.0%
! AGGGAGAAGTATGTGAGAAA+AGG - chr5.1:22337050-22337069 MS.gene046411:intron 40.0%
! TTGTTGTTCATTCTGAGGAG+CGG - chr5.1:22338756-22338775 MS.gene046411:intron 40.0%
!! CAACCAGCTATTTTCACATC+AGG + chr5.1:22339935-22339954 None:intergenic 40.0%
!! CTAGAATGCTTAGTTCTGGT+AGG - chr5.1:22338780-22338799 MS.gene046411:intron 40.0%
!! GATATCCGTTTGGTTTGGTT+TGG - chr5.1:22339759-22339778 MS.gene046411:CDS 40.0%
!! TATTTCTGAGCTTGCTGCAA+TGG - chr5.1:22337283-22337302 MS.gene046411:intron 40.0%
!!! ACTTTTTCAGGATTTGCACC+TGG + chr5.1:22338341-22338360 None:intergenic 40.0%
AAAACAAAAAGGAGGAGGGG+GGG + chr5.1:22337841-22337860 None:intergenic 45.0%
AACCTACCTACCAAGACTCT+AGG + chr5.1:22337692-22337711 None:intergenic 45.0%
AACGCTTTGCCAGTTCAACA+AGG + chr5.1:22337178-22337197 None:intergenic 45.0%
AATGTTGTCCATGTTGGCGT+GGG - chr5.1:22339385-22339404 MS.gene046411:intron 45.0%
ACAAAGAACAAGGACGTGGA+AGG - chr5.1:22339047-22339066 MS.gene046411:CDS 45.0%
ACATACTTCTCCCTCTTTGG+GGG + chr5.1:22337044-22337063 None:intergenic 45.0%
ACGCTTTGCCAGTTCAACAA+GGG + chr5.1:22337177-22337196 None:intergenic 45.0%
ACTCCTTCAGGCTGATATGA+TGG - chr5.1:22338475-22338494 MS.gene046411:intron 45.0%
AGAGGAAGCTTTACTCCTTC+AGG - chr5.1:22338463-22338482 MS.gene046411:intron 45.0%
AGAGTCTTGGTAGGTAGGTT+TGG - chr5.1:22337692-22337711 MS.gene046411:CDS 45.0%
AGAGTTTGAGCCTCTCAGTA+TGG - chr5.1:22337259-22337278 MS.gene046411:intron 45.0%
AGCAACTCGTGCTAGTATCA+AGG - chr5.1:22339504-22339523 MS.gene046411:intron 45.0%
AGCAAGACTTGACAAAGGAC+GGG - chr5.1:22338544-22338563 MS.gene046411:intron 45.0%
AGCATCATTTGGCCTATGCA+TGG - chr5.1:22336591-22336610 MS.gene046411:intron 45.0%
AGGGCTATTAAAGATGCAGC+AGG - chr5.1:22338650-22338669 MS.gene046411:intron 45.0%
AGTAGGGGGACTAAAGAATG+TGG - chr5.1:22336487-22336506 MS.gene046411:intron 45.0%
ATACTGAGGAGGTTCCAAAG+AGG - chr5.1:22338867-22338886 MS.gene046411:intron 45.0%
ATCACATTTCTCGACACTCC+TGG - chr5.1:22338149-22338168 MS.gene046411:CDS 45.0%
ATGGTTTGAATCCCCCAAAG+AGG - chr5.1:22337030-22337049 MS.gene046411:intron 45.0%
CAAAACAAAAAGGAGGAGGG+GGG + chr5.1:22337842-22337861 None:intergenic 45.0%
CAATCACTCATGCATAGGTG+TGG - chr5.1:22336456-22336475 MS.gene046411:CDS 45.0%
CAATGCCTGTGGAGATTGAA+GGG - chr5.1:22338699-22338718 MS.gene046411:intron 45.0%
CACATACTTCTCCCTCTTTG+GGG + chr5.1:22337045-22337064 None:intergenic 45.0%
CATCATGTAGGCATGTGGTA+GGG - chr5.1:22336270-22336289 MS.gene046411:CDS 45.0%
CCCTGCAACATGGATAATTG+TGG + chr5.1:22336136-22336155 None:intergenic 45.0%
CCTCCAGTTGTAACAGTGAT+GGG - chr5.1:22337999-22338018 MS.gene046411:CDS 45.0%
CCTGATTGGTAGATTGGGTT+GGG - chr5.1:22336749-22336768 MS.gene046411:CDS 45.0%
CTAGTTGTTGCTGCAGATGA+CGG - chr5.1:22338230-22338249 MS.gene046411:CDS 45.0%
CTATTAAAGATGCAGCAGGG+AGG - chr5.1:22338654-22338673 MS.gene046411:intron 45.0%
CTCACATACTTCTCCCTCTT+TGG + chr5.1:22337047-22337066 None:intergenic 45.0%
CTCGCAGTGGGGAAAAATAA+GGG - chr5.1:22338631-22338650 MS.gene046411:intron 45.0%
CTGCTTCACTTGGAGCATAT+AGG - chr5.1:22337464-22337483 MS.gene046411:CDS 45.0%
GAAGGAGTAAAGCTTCCTCT+AGG + chr5.1:22338463-22338482 None:intergenic 45.0%
GACACAGCTTCAAGTGTTTG+GGG + chr5.1:22338263-22338282 None:intergenic 45.0%
GAGTCTTGGTAGGTAGGTTT+GGG - chr5.1:22337693-22337712 MS.gene046411:CDS 45.0%
GATCCATCATATCAGCCTGA+AGG + chr5.1:22338481-22338500 None:intergenic 45.0%
GCTGCTTGGGTAAGAGATAT+AGG + chr5.1:22339487-22339506 None:intergenic 45.0%
GCTGGTTGCAAAGTTGTTGA+AGG - chr5.1:22339947-22339966 MS.gene046411:CDS 45.0%
GCTTGGGTAAGAGATATAGG+TGG + chr5.1:22339484-22339503 None:intergenic 45.0%
GGACACAGCTTCAAGTGTTT+GGG + chr5.1:22338264-22338283 None:intergenic 45.0%
GGACCTGATGTGAAAATAGC+TGG - chr5.1:22339929-22339948 MS.gene046411:CDS 45.0%
GGGCTATTAAAGATGCAGCA+GGG - chr5.1:22338651-22338670 MS.gene046411:intron 45.0%
GGTTCCAAAGAGGGTTGAAA+TGG - chr5.1:22338877-22338896 MS.gene046411:intron 45.0%
GTGACTACTATAGTGAAGGC+AGG - chr5.1:22338575-22338594 MS.gene046411:intron 45.0%
GTGACTTTACAAGGGACATG+TGG + chr5.1:22337104-22337123 None:intergenic 45.0%
GTTTCCGCGCTTAAAAAGAC+TGG - chr5.1:22338428-22338447 MS.gene046411:intron 45.0%
TACTGAGGAGGTTCCAAAGA+GGG - chr5.1:22338868-22338887 MS.gene046411:intron 45.0%
TAGTACTAGGCCTAGAGTCT+TGG - chr5.1:22337679-22337698 MS.gene046411:CDS 45.0%
TCAACCACATATGCTTGAGC+AGG + chr5.1:22338524-22338543 None:intergenic 45.0%
TCAAGAAGTGATGCAGCGTA+TGG - chr5.1:22337011-22337030 MS.gene046411:intron 45.0%
TCCACGTCGGATTGAGAAAT+AGG + chr5.1:22339412-22339431 None:intergenic 45.0%
TCCTCCAGTTGTAACAGTGA+TGG - chr5.1:22337998-22338017 MS.gene046411:CDS 45.0%
TCCTGATTGGTAGATTGGGT+TGG - chr5.1:22336748-22336767 MS.gene046411:CDS 45.0%
TGACCCATCACTGTTACAAC+TGG + chr5.1:22338005-22338024 None:intergenic 45.0%
TGGTTTGAATCCCCCAAAGA+GGG - chr5.1:22337031-22337050 MS.gene046411:intron 45.0%
TTTGAAGAGGACAGGCTTAG+GGG - chr5.1:22338812-22338831 MS.gene046411:intron 45.0%
! AAAACTGCAGCTTGCTTCAG+AGG - chr5.1:22338361-22338380 MS.gene046411:intron 45.0%
! AAACTGCAGCTTGCTTCAGA+GGG - chr5.1:22338362-22338381 MS.gene046411:intron 45.0%
! AAGGCAGGAACTCTAGTTTG+TGG - chr5.1:22338590-22338609 MS.gene046411:intron 45.0%
! ACTGCCATTTCAACCCTCTT+TGG + chr5.1:22338884-22338903 None:intergenic 45.0%
! AGGTGTGGCTGGTTATAGTA+GGG - chr5.1:22336471-22336490 MS.gene046411:intron 45.0%
! GCTTCTAAGGAGTGGTGAAA+TGG - chr5.1:22339997-22340016 MS.gene046411:CDS 45.0%
! TAGGTGTGGCTGGTTATAGT+AGG - chr5.1:22336470-22336489 MS.gene046411:intron 45.0%
! TCTAGTTTGTGGACAGCATG+TGG - chr5.1:22338601-22338620 MS.gene046411:intron 45.0%
! TGTTGTTCATTCTGAGGAGC+GGG - chr5.1:22338757-22338776 MS.gene046411:intron 45.0%
! TTGACGCAAGGCATCAAGAA+GGG + chr5.1:22338048-22338067 None:intergenic 45.0%
! TTGATAATAGAGAAGGCCCC+AGG - chr5.1:22339833-22339852 MS.gene046411:intron 45.0%
! TTTGACGCAAGGCATCAAGA+AGG + chr5.1:22338049-22338068 None:intergenic 45.0%
!! CAGTCCAGTCTTTTTAAGCG+CGG + chr5.1:22338435-22338454 None:intergenic 45.0%
!! GGCTGCTAGCAATGTTTTGA+TGG - chr5.1:22337530-22337549 MS.gene046411:CDS 45.0%
!! GTGATGGGTCATGTTGATCA+CGG - chr5.1:22338014-22338033 MS.gene046411:CDS 45.0%
!! TCCGTTTGGTTTGGTTTGGT+AGG - chr5.1:22339763-22339782 MS.gene046411:CDS 45.0%
!!! TATTTTTATTAATAAAATTC+AGG - chr5.1:22339648-22339667 MS.gene046411:intron 5.0%
ACCACTCCTTAGAAGCCTCA+TGG + chr5.1:22339993-22340012 None:intergenic 50.0%
ACCAGACTTGTGAGCTAGCA+TGG + chr5.1:22336992-22337011 None:intergenic 50.0%
ACTAGGCCTAGAGTCTTGGT+AGG - chr5.1:22337683-22337702 MS.gene046411:CDS 50.0%
ACTGTTACAACTGGAGGACG+TGG + chr5.1:22337996-22338015 None:intergenic 50.0%
AGGCATGACCCTTGTTGAAC+TGG - chr5.1:22337166-22337185 MS.gene046411:intron 50.0%
AGTAATGCCACCAGCTTCCT+TGG + chr5.1:22338084-22338103 None:intergenic 50.0%
ATGTTGTCCATGTTGGCGTG+GGG - chr5.1:22339386-22339405 MS.gene046411:intron 50.0%
CACGTCCTTGTTCTTTGTGC+GGG + chr5.1:22339045-22339064 None:intergenic 50.0%
CAGCAACCATGAGGCTTCTA+AGG - chr5.1:22339984-22340003 MS.gene046411:CDS 50.0%
CATCTAGGTGCCTTTGTGGT+GGG - chr5.1:22338107-22338126 MS.gene046411:CDS 50.0%
CCACGTCCTTGTTCTTTGTG+CGG + chr5.1:22339046-22339065 None:intergenic 50.0%
CCCAACCCAATCTACCAATC+AGG + chr5.1:22336752-22336771 None:intergenic 50.0%
CCCATCACTGTTACAACTGG+AGG + chr5.1:22338002-22338021 None:intergenic 50.0%
CGCGCTTAAAAAGACTGGAC+TGG - chr5.1:22338433-22338452 MS.gene046411:intron 50.0%
CTTTGGCTGCAGCATCATGT+AGG - chr5.1:22336258-22336277 MS.gene046411:CDS 50.0%
GAATGTTGTCCATGTTGGCG+TGG - chr5.1:22339384-22339403 MS.gene046411:intron 50.0%
GCAAGACTTGACAAAGGACG+GGG - chr5.1:22338545-22338564 MS.gene046411:intron 50.0%
GCAATGCCTGTGGAGATTGA+AGG - chr5.1:22338698-22338717 MS.gene046411:intron 50.0%
GCATCATGTAGGCATGTGGT+AGG - chr5.1:22336269-22336288 MS.gene046411:CDS 50.0%
GCATCTCCCCATTTGTCGTA+AGG - chr5.1:22337615-22337634 MS.gene046411:CDS 50.0%
GCTCGCAGTGGGGAAAAATA+AGG - chr5.1:22338630-22338649 MS.gene046411:intron 50.0%
GGGACACAGCTTCAAGTGTT+TGG + chr5.1:22338265-22338284 None:intergenic 50.0%
GGTGGCATTACTCAGCATCT+AGG - chr5.1:22338092-22338111 MS.gene046411:CDS 50.0%
TACTAGCACGAGTTGCTGCT+TGG + chr5.1:22339501-22339520 None:intergenic 50.0%
TAGCCCTACTCACCATGCAT+AGG + chr5.1:22336606-22336625 None:intergenic 50.0%
TATGCATGGTGAGTAGGGCT+AGG - chr5.1:22336605-22336624 MS.gene046411:intron 50.0%
TCAGCATCTAGGTGCCTTTG+TGG - chr5.1:22338103-22338122 MS.gene046411:CDS 50.0%
TCCATGCTAGCTCACAAGTC+TGG - chr5.1:22336988-22337007 MS.gene046411:intron 50.0%
TGAACAGGACAGCAACCATG+AGG - chr5.1:22339975-22339994 MS.gene046411:CDS 50.0%
TGATGACATGCCCACCACAA+AGG + chr5.1:22338120-22338139 None:intergenic 50.0%
TGCAGCATCATGTAGGCATG+TGG - chr5.1:22336265-22336284 MS.gene046411:CDS 50.0%
TGCTGTTAGAGGAGATGGGT+GGG - chr5.1:22338387-22338406 MS.gene046411:intron 50.0%
TGGAGATTGAAGGGCTTCGA+GGG - chr5.1:22338708-22338727 MS.gene046411:intron 50.0%
TGGCCACGTCTTCCAATAAG+TGG + chr5.1:22339811-22339830 None:intergenic 50.0%
TGGCCTATGCATGGTGAGTA+GGG - chr5.1:22336600-22336619 MS.gene046411:intron 50.0%
TGGTCCTGCTCAAGCATATG+TGG - chr5.1:22338517-22338536 MS.gene046411:intron 50.0%
TGTGGACAGCATGTGGTTGT+AGG - chr5.1:22338608-22338627 MS.gene046411:intron 50.0%
TTGGCCTATGCATGGTGAGT+AGG - chr5.1:22336599-22336618 MS.gene046411:intron 50.0%
TTTAGTGCCATGCGAGCAAG+AGG - chr5.1:22338182-22338201 MS.gene046411:CDS 50.0%
! ACCATGAGGCTTCTAAGGAG+TGG - chr5.1:22339989-22340008 MS.gene046411:CDS 50.0%
! ACTAGCACGAGTTGCTGCTT+GGG + chr5.1:22339500-22339519 None:intergenic 50.0%
! CGGGCTAGAATGCTTAGTTC+TGG - chr5.1:22338776-22338795 MS.gene046411:intron 50.0%
! GACTGGACTGGATAACCTAG+AGG - chr5.1:22338445-22338464 MS.gene046411:intron 50.0%
! GCCTATTTCTCAATCCGACG+TGG - chr5.1:22339408-22339427 MS.gene046411:intron 50.0%
! GGTGTGGCTGGTTATAGTAG+GGG - chr5.1:22336472-22336491 MS.gene046411:intron 50.0%
! GTGTGGCTGGTTATAGTAGG+GGG - chr5.1:22336473-22336492 MS.gene046411:intron 50.0%
! GTTGAACTGGCAAAGCGTTC+TGG - chr5.1:22337179-22337198 MS.gene046411:intron 50.0%
! TCAATCTCCACAGGCATTGC+TGG + chr5.1:22338698-22338717 None:intergenic 50.0%
! TTGCTGTTAGAGGAGATGGG+TGG - chr5.1:22338386-22338405 MS.gene046411:intron 50.0%
!! GGCTTGCTGTTAGAGGAGAT+GGG - chr5.1:22338383-22338402 MS.gene046411:intron 50.0%
!! TTCAGAGGGCTTGCTGTTAG+AGG - chr5.1:22338376-22338395 MS.gene046411:intron 50.0%
!! TTTGTGGTGGGCATGTCATC+AGG - chr5.1:22338119-22338138 MS.gene046411:CDS 50.0%
AAATAGGCCCCACGCCAACA+TGG + chr5.1:22339396-22339415 None:intergenic 55.0%
AGCAACTCCAGCAATGCCTG+TGG - chr5.1:22338688-22338707 MS.gene046411:intron 55.0%
ATGACATCGTCACCGGCCAT+TGG + chr5.1:22338737-22338756 None:intergenic 55.0%
ATGGCGGCTTTGCTGAAGCT+TGG - chr5.1:22336047-22336066 MS.gene046411:CDS 55.0%
ATGTGGTTGTAGGCTCGCAG+TGG - chr5.1:22338618-22338637 MS.gene046411:intron 55.0%
CACTCATGCATAGGTGTGGC+TGG - chr5.1:22336460-22336479 MS.gene046411:intron 55.0%
CCGCACAAAGAACAAGGACG+TGG - chr5.1:22339043-22339062 MS.gene046411:CDS 55.0%
CGAAGCCCTTCAATCTCCAC+AGG + chr5.1:22338707-22338726 None:intergenic 55.0%
GCACTAAATGCAGCGTGACC+AGG + chr5.1:22338170-22338189 None:intergenic 55.0%
GCATCAGCAAGATGCATGGC+TGG - chr5.1:22336332-22336351 MS.gene046411:CDS 55.0%
GCATCTAGGTGCCTTTGTGG+TGG - chr5.1:22338106-22338125 MS.gene046411:CDS 55.0%
GCTGTTAGAGGAGATGGGTG+GGG - chr5.1:22338388-22338407 MS.gene046411:intron 55.0%
GCTTGCGGTGCATGCATAGT+TGG - chr5.1:22339442-22339461 MS.gene046411:intron 55.0%
GGAGATGGGTGGGGATATTC+AGG - chr5.1:22338397-22338416 MS.gene046411:intron 55.0%
GGCCTAGAGTCTTGGTAGGT+AGG - chr5.1:22337687-22337706 MS.gene046411:CDS 55.0%
GTGGAGATTGAAGGGCTTCG+AGG - chr5.1:22338707-22338726 MS.gene046411:intron 55.0%
TCAAACGTCAGTGGCAGCCA+AGG - chr5.1:22338064-22338083 MS.gene046411:CDS 55.0%
TGACAAAGGACGGGGTCCAT+TGG - chr5.1:22338553-22338572 MS.gene046411:intron 55.0%
TGATGCTGCAGCCAAAGCTC+TGG + chr5.1:22336255-22336274 None:intergenic 55.0%
TGCCACTGACGTTTGACGCA+AGG + chr5.1:22338060-22338079 None:intergenic 55.0%
TGCCTTGCGTCAAACGTCAG+TGG - chr5.1:22338055-22338074 MS.gene046411:CDS 55.0%
TGTGGTTGTAGGCTCGCAGT+GGG - chr5.1:22338619-22338638 MS.gene046411:intron 55.0%
! ACATGTGGAGCGTCAACAGG+AGG + chr5.1:22337089-22337108 None:intergenic 55.0%
!! GGGCTTGCTGTTAGAGGAGA+TGG - chr5.1:22338382-22338401 MS.gene046411:intron 55.0%
!!! GGGATGGGGGCACTTTTAAG+AGG - chr5.1:22336669-22336688 MS.gene046411:intron 55.0%
ACCTGAGTCTCGGGTGTACC+TGG + chr5.1:22339854-22339873 None:intergenic 60.0%
AGCCTGTGCTAGGTCCACGT+CGG + chr5.1:22339425-22339444 None:intergenic 60.0%
AGGAGGGGGGGATTAGAGAG+TGG + chr5.1:22337829-22337848 None:intergenic 60.0%
AGGGGGGGATTAGAGAGTGG+CGG + chr5.1:22337826-22337845 None:intergenic 60.0%
AGGTACACCCGAGACTCAGG+TGG - chr5.1:22339853-22339872 MS.gene046411:intron 60.0%
ATCCGACGTGGACCTAGCAC+AGG - chr5.1:22339420-22339439 MS.gene046411:intron 60.0%
ATGCACCGCAAGCCTGTGCT+AGG + chr5.1:22339435-22339454 None:intergenic 60.0%
CCTGAGTCTCGGGTGTACCT+GGG + chr5.1:22339853-22339872 None:intergenic 60.0%
CTGAGTCTCGGGTGTACCTG+GGG + chr5.1:22339852-22339871 None:intergenic 60.0%
GCTCGCCCGCACAAAGAACA+AGG - chr5.1:22339037-22339056 MS.gene046411:CDS 60.0%
GTGGACCTAGCACAGGCTTG+CGG - chr5.1:22339427-22339446 MS.gene046411:intron 60.0%
GTGGTTGTAGGCTCGCAGTG+GGG - chr5.1:22338620-22338639 MS.gene046411:intron 60.0%
TCAGTGGCAGCCAAGGAAGC+TGG - chr5.1:22338071-22338090 MS.gene046411:CDS 60.0%
TGCTGCACCTCTTGCTCGCA+TGG + chr5.1:22338192-22338211 None:intergenic 60.0%
TTGCCCAGCCACCTGAGTCT+CGG + chr5.1:22339864-22339883 None:intergenic 60.0%
! GGGACATGTGGAGCGTCAAC+AGG + chr5.1:22337092-22337111 None:intergenic 60.0%
ACACCCGAGACTCAGGTGGC+TGG - chr5.1:22339857-22339876 MS.gene046411:intron 65.0%
AGGGCTTCGAGGGCTGCCAA+TGG - chr5.1:22338718-22338737 MS.gene046411:intron 65.0%
CACCCGAGACTCAGGTGGCT+GGG - chr5.1:22339858-22339877 MS.gene046411:intron 65.0%
CCCAGGTACACCCGAGACTC+AGG - chr5.1:22339850-22339869 MS.gene046411:intron 65.0%
CTTCGAGGGCTGCCAATGGC+CGG - chr5.1:22338722-22338741 MS.gene046411:intron 65.0%
GTGGCAGCCAAGGAAGCTGG+TGG - chr5.1:22338074-22338093 MS.gene046411:CDS 65.0%
TGCCCAGCCACCTGAGTCTC+GGG + chr5.1:22339863-22339882 None:intergenic 65.0%
! GTGGAGCGTCAACAGGAGGC+TGG + chr5.1:22337085-22337104 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 22336047 22340216 22336047 ID=MS.gene046411
chr5.1 mRNA 22336047 22340216 22336047 ID=MS.gene046411.t1;Parent=MS.gene046411
chr5.1 exon 22340187 22340216 22340187 ID=MS.gene046411.t1.exon1;Parent=MS.gene046411.t1
chr5.1 CDS 22340187 22340216 22340187 ID=cds.MS.gene046411.t1;Parent=MS.gene046411.t1
chr5.1 exon 22339910 22340030 22339910 ID=MS.gene046411.t1.exon2;Parent=MS.gene046411.t1
chr5.1 CDS 22339910 22340030 22339910 ID=cds.MS.gene046411.t1;Parent=MS.gene046411.t1
chr5.1 exon 22339748 22339814 22339748 ID=MS.gene046411.t1.exon3;Parent=MS.gene046411.t1
chr5.1 CDS 22339748 22339814 22339748 ID=cds.MS.gene046411.t1;Parent=MS.gene046411.t1
chr5.1 exon 22338959 22339280 22338959 ID=MS.gene046411.t1.exon4;Parent=MS.gene046411.t1
chr5.1 CDS 22338959 22339280 22338959 ID=cds.MS.gene046411.t1;Parent=MS.gene046411.t1
chr5.1 exon 22337287 22338324 22337287 ID=MS.gene046411.t1.exon5;Parent=MS.gene046411.t1
chr5.1 CDS 22337287 22338324 22337287 ID=cds.MS.gene046411.t1;Parent=MS.gene046411.t1
chr5.1 exon 22336738 22336887 22336738 ID=MS.gene046411.t1.exon6;Parent=MS.gene046411.t1
chr5.1 CDS 22336738 22336887 22336738 ID=cds.MS.gene046411.t1;Parent=MS.gene046411.t1
chr5.1 exon 22336047 22336478 22336047 ID=MS.gene046411.t1.exon7;Parent=MS.gene046411.t1
chr5.1 CDS 22336047 22336478 22336047 ID=cds.MS.gene046411.t1;Parent=MS.gene046411.t1
Gene Sequence

>MS.gene046411

ATGGCGGCTTTGCTGAAGCTTGGAAAGAAGGTAAGTTGACTTTTATAATAAGCACCAGCTCCTTTCATTTTAAATTGTGTAAAATACCACAATTATCCATGTTGCAGGGGGTTTTATTTTTCCTATAATAAAGTGTATATAGCTCATTAAGTTTCTGATAATACCCTTTTTATTATCTGAATGCAGAGAATATATATGAACTTTACCAGAGCTTTGGCTGCAGCATCATGTAGGCATGTGGTAGGGTCAAGTTTTGCATCTATATTTGCTTCACAATCTGTTTATGCATCAGCAAGATGCATGGCTGGTAATTGACGTCATTTATGCTTATAGTGTTTCATTTCCAGCACTTGTTTATTGTATACTATTATACTTACACGTACTTCACATTACCTGATGCAGATTTCATCAATCACTCATGCATAGGTGTGGCTGGTTATAGTAGGGGGACTAAAGAATGTGGAATACGGTGAGATAGTACTCAAATTTCAAGTTTTAAAATGAACAATTGTTAGCATTACAGTTTAGGTGGTTTAAGGATGACAGCATCATTTGGCCTATGCATGGTGAGTAGGGCTAGGAGAAGTTAGTTTACTTTTAAAGATATGCATAAAATTACAGAGGGATGGGGGCACTTTTAAGAGGCCGTAATTTATGTACTGTTTTGTGAGTTGATAGGTATACTACATCGGTGATAATACTCCTGATTGGTAGATTGGGTTGGGTTTTTTTACATGCTAATAATACTGTAATAAATGGTCCTGAATTTTTCAAGCATCTCTCGGCTGTAGACGAAAATGCCAATGCTAAAATTTGTGCGATTGCACATGGAAGAAAGAAGTGACATTAGTTGAAAATTTGGTACTTATAAGTAAAAAGCTGGACAATTGTAAAAACGAAAAGCTAGATGTAATTAGTTTTGTTTTACGTTGGCAGGTGCTTCCATGCTAGCTCACAAGTCTGGTCAAGAAGTGATGCAGCGTATGGTTTGAATCCCCCAAAGAGGGAGAAGTATGTGAGAAAAGGCAGTAGAAACCAGCCTCCTGTTGACGCTCCACATGTCCCTTGTAAAGTCACTGCAACCAAATCTAATCCTGATAAAACGATAGAAATATTTGAAGGCATGACCCTTGTTGAACTGGCAAAGCGTTCTGGAAAAGCAGTATCTTCTTTGCAAGATATTCTCACAACTGTTGGTGAAAAAATTCAATCAGAGTTTGAGCCTCTCAGTATGGATATTTCTGAGCTTGCTGCAATGGTATATCCTTCTTAGTCATAGATGATGTTAAATCAGTGAATATAGGAAATCAGTATCGTCTTTTGATTCCAATACTTGTTTGTTAGCCTTTTCCCATTTGTAAATGACAGCTTGTTAGGGAAAAAAATATTTTGCTCATACTCTACTCATTGTCTCATTCTGCTTCACTTGGAGCATATAGGATTCAAAGTTATCTTTAATAATTTTTTAGTTGCTTGAGATAAAGGCTGCTAGCAATGTTTTGATGGAAATCAATGGAGTTTGAGATATACTTTTCCTTAAATTGATAGTTGGCATTGGTAGATTTTGTGCATCTCCCCATTTGTCGTAAGGCACAATATGCATAGGAAAGTAAAAGGGAAATAAGTAATCGATAGTACTAGGCCTAGAGTCTTGGTAGGTAGGTTTGGGAAATATTTAGTTTCGATCCATCATTGCAGCATTATTATACTTGGGTATTCTTACACCTTTTTTTTTTTTTTTTGCCTTATTTCTGGATCATTGACTCACAAGTGTCTCCGCCACTCTCTAATCCCCCCCTCCTCCTTTTTGTTTTGAACTACATGATGATTTTTTAGGTTCCTGTTTGTGGATATTTGTTTTCTTTCACTTAATTTGTTCATTTCTGTTGCAGGAAGTTGGCGTCAATGTTAAGAGGTTACATTCAACTGAAGGTAAAGAAGTTTTACCACGTCCTCCAGTTGTAACAGTGATGGGTCATGTTGATCACGGAAAAACTTCCCTTCTTGATGCCTTGCGTCAAACGTCAGTGGCAGCCAAGGAAGCTGGTGGCATTACTCAGCATCTAGGTGCCTTTGTGGTGGGCATGTCATCAGGAGCATCAATCACATTTCTCGACACTCCTGGTCACGCTGCATTTAGTGCCATGCGAGCAAGAGGTGCAGCAGTCACAGATATAGTAGTTCTAGTTGTTGCTGCAGATGACGGTGTAATGCCCCAAACACTTGAAGCTGTGTCCCATGCAAAATCAGCTAATGTACCAGTTGTAGTTGCAGTCAATAAATGTGATAAACCAGGTGCAAATCCTGAAAAAGTAAAACTGCAGCTTGCTTCAGAGGGCTTGCTGTTAGAGGAGATGGGTGGGGATATTCAGGTTGTTGAAGTTTCCGCGCTTAAAAAGACTGGACTGGATAACCTAGAGGAAGCTTTACTCCTTCAGGCTGATATGATGGATCTTAAAGCACGATTTGATGGTCCTGCTCAAGCATATGTGGTTGAAGCAAGACTTGACAAAGGACGGGGTCCATTGGTGACTACTATAGTGAAGGCAGGAACTCTAGTTTGTGGACAGCATGTGGTTGTAGGCTCGCAGTGGGGAAAAATAAGGGCTATTAAAGATGCAGCAGGGAGGTTAACTCAACGAGCAACTCCAGCAATGCCTGTGGAGATTGAAGGGCTTCGAGGGCTGCCAATGGCCGGTGACGATGTCATTGTTGTTCATTCTGAGGAGCGGGCTAGAATGCTTAGTTCTGGTAGGAAAAAGAAATTTGAAGAGGACAGGCTTAGGGGTAAGATAGTGCATGTCCCAACTACTTCAGATGATACTGAGGAGGTTCCAAAGAGGGTTGAAATGGCAGTAATTGTAAAAGGAGATGTTCAGGGAACTGTTCAAGCTGTTACAGATGCATTGACAACTTTGAATAGTCCTCAGGTATGTGATGGTTATTATAACTATAATATGGTAAACTTTTCTTTTTGCATACACGCACATGCTCGCCCGCACAAAGAACAAGGACGTGGAAGGCCGTCAACAACAGATAGTGTATTAATCGGAAATTATTACATCAGTTACAAGTAAATATAAAACAGTAGGTTTTAAACATAAGTGTTTGTGATATTTAACTAAGATCACATTAATCAGCATGGATGTATGAGCTTAACCTTTTTCCCTTTTTTTTTCTGTTGATGCATGTTTGATCAAGTTATTATTAGCCTTTGTCCAAATGTTGAGATATAAATAAAAATTCTGATAAGTTTAGTGTTGTTTTATTAATATTTTATTTGCTATTTGTTGCTATATAAAATAACCATTCTGTAATTTCATTGTTAGGTTTCTGTGAATGTTGTCCATGTTGGCGTGGGGCCTATTTCTCAATCCGACGTGGACCTAGCACAGGCTTGCGGTGCATGCATAGTTGGATTCAATGTCAAGAGTCCACCTATATCTCTTACCCAAGCAGCAACTCGTGCTAGTATCAAGGTATTTTAAGCCTTTTCCTGAGTAATCACTGATTTAGTCCCTAAGATTATAAGACGTCAACTTAATCTCTGAAATTAGTGAAGTTTCAAAATATTCCTAAATTTGAAAATTTTCAGTCACATTATTTTTATTAATAAAATTCAGGTGCTGAGTTGACGCCTTACAATTTTAAAGACTAAATTGGTGATTTACTCATTTAGCTATTTAGTGATTGAAATTTTTTATTTCAATTTGATATCCGTTTGGTTTGGTTTGGTAGGTAATTATGCACCGTGTGATTTACCACTTATTGGAAGACGTGGCCAATTTGATAATAGAGAAGGCCCCAGGTACACCCGAGACTCAGGTGGCTGGGCAAGCAGAAGTGCTGAATATCTTTGAAGTGAAAGGGAGCAAATCTAAGGGACCTGATGTGAAAATAGCTGGTTGCAAAGTTGTTGAAGGTTTTGTGAACAGGACAGCAACCATGAGGCTTCTAAGGAGTGGTGAAATGGTGTTTGAAGGACCTTGTTCGTCTCTTAAGAGGGAGAAGCAGGATGTGGATTCTGTGAAGAAAGGAAATGAGTGTGGACTAGTAATCAGTAACTGTTGTGATTTTCAGATTGGAGATGTTATACAGTGCTTAGAACAAGTAGTTAGGAAGCCCAAATTTATTAAGTCGGAGAGTGGTGCTGTTCGAATAGAGTGCTGA
Protein sequence

>MS.gene046411.t1

MAALLKLGKKRIYMNFTRALAAASCRHVVGSSFASIFASQSVYASARCMADFINHSCIGVAGYSRGTKECGIRCFHASSQVWSRSDAAYGLNPPKREKYVRKGSRNQPPVDAPHVPCKVTATKSNPDKTIEIFEGMTLVELAKRSGKAVSSLQDILTTVGEKIQSEFEPLSMDISELAAMEVGVNVKRLHSTEGKEVLPRPPVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVGMSSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAVSHAKSANVPVVVAVNKCDKPGANPEKVKLQLASEGLLLEEMGGDIQVVEVSALKKTGLDNLEEALLLQADMMDLKARFDGPAQAYVVEARLDKGRGPLVTTIVKAGTLVCGQHVVVGSQWGKIRAIKDAAGRLTQRATPAMPVEIEGLRGLPMAGDDVIVVHSEERARMLSSGRKKKFEEDRLRGKIVHVPTTSDDTEEVPKRVEMAVIVKGDVQGTVQAVTDALTTLNSPQVSVNVVHVGVGPISQSDVDLAQACGACIVGFNVKSPPISLTQAATRASIKVIMHRVIYHLLEDVANLIIEKAPGTPETQVAGQAEVLNIFEVKGSKSKGPDVKIAGCKVVEGFVNRTATMRLLRSGEMVFEGPCSSLKREKQDVDSVKKGNECGLVISNCCDFQIGDVIQCLEQVVRKPKFIKSESGAVRIEC