Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04727.t1 | XP_003630746.1 | 99.4 | 517 | 3 | 0 | 1 | 517 | 1 | 517 | 2.60E-290 | 1007.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04727.t1 | Q8GW61 | 69.3 | 501 | 154 | 0 | 1 | 501 | 1 | 501 | 5.4e-204 | 711.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04727.t1 | G7L854 | 99.4 | 517 | 3 | 0 | 1 | 517 | 1 | 517 | 1.9e-290 | 1007.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene04727 | MS.gene92308 | PPI |
MS.gene04727 | MS.gene064542 | PPI |
MS.gene055771 | MS.gene04727 | PPI |
MS.gene035805 | MS.gene04727 | PPI |
MS.gene04727 | MS.gene73119 | PPI |
MS.gene04727 | MS.gene024888 | PPI |
MS.gene04727 | MS.gene031671 | PPI |
MS.gene04727 | MS.gene006634 | PPI |
MS.gene31419 | MS.gene04727 | PPI |
MS.gene000139 | MS.gene04727 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04727.t1 | MTR_8g102860 | 99.420 | 517 | 3 | 0 | 1 | 517 | 1 | 517 | 0.0 | 1043 |
MS.gene04727.t1 | MTR_8g102860 | 99.355 | 465 | 3 | 0 | 53 | 517 | 1 | 465 | 0.0 | 937 |
MS.gene04727.t1 | MTR_6g087040 | 75.930 | 511 | 120 | 1 | 1 | 511 | 1 | 508 | 0.0 | 804 |
MS.gene04727.t1 | MTR_6g088375 | 75.930 | 511 | 120 | 1 | 1 | 511 | 1 | 508 | 0.0 | 804 |
MS.gene04727.t1 | MTR_0204s0020 | 58.788 | 495 | 200 | 3 | 6 | 499 | 1 | 492 | 0.0 | 602 |
MS.gene04727.t1 | MTR_7g091690 | 58.777 | 507 | 204 | 4 | 1 | 505 | 1 | 504 | 0.0 | 593 |
MS.gene04727.t1 | MTR_0204s0020 | 58.384 | 495 | 199 | 4 | 6 | 499 | 1 | 489 | 0.0 | 593 |
MS.gene04727.t1 | MTR_5g094760 | 57.791 | 507 | 209 | 4 | 1 | 505 | 1 | 504 | 0.0 | 590 |
MS.gene04727.t1 | MTR_0204s0040 | 55.200 | 500 | 217 | 4 | 3 | 501 | 9 | 502 | 0.0 | 572 |
MS.gene04727.t1 | MTR_4g116770 | 55.090 | 501 | 218 | 4 | 2 | 501 | 204 | 698 | 0.0 | 570 |
MS.gene04727.t1 | MTR_4g116790 | 54.762 | 504 | 222 | 4 | 3 | 505 | 6 | 504 | 0.0 | 559 |
MS.gene04727.t1 | MTR_5g006070 | 53.785 | 502 | 223 | 7 | 18 | 514 | 14 | 511 | 0.0 | 546 |
MS.gene04727.t1 | MTR_1g104780 | 52.224 | 517 | 238 | 6 | 1 | 513 | 1 | 512 | 0.0 | 523 |
MS.gene04727.t1 | MTR_1g038630 | 53.280 | 503 | 227 | 5 | 18 | 517 | 15 | 512 | 0.0 | 523 |
MS.gene04727.t1 | MTR_5g082540 | 51.984 | 504 | 234 | 5 | 1 | 501 | 1 | 499 | 1.02e-177 | 509 |
MS.gene04727.t1 | MTR_3g008160 | 51.503 | 499 | 236 | 4 | 18 | 514 | 15 | 509 | 2.49e-177 | 509 |
MS.gene04727.t1 | MTR_5g006070 | 53.747 | 467 | 207 | 7 | 53 | 514 | 1 | 463 | 1.49e-176 | 505 |
MS.gene04727.t1 | MTR_1g104770 | 49.900 | 501 | 243 | 6 | 1 | 497 | 1 | 497 | 2.46e-175 | 503 |
MS.gene04727.t1 | MTR_5g041550 | 50.193 | 518 | 244 | 7 | 1 | 509 | 1 | 513 | 1.55e-173 | 499 |
MS.gene04727.t1 | MTR_3g093010 | 51.556 | 514 | 237 | 7 | 1 | 508 | 1 | 508 | 3.22e-173 | 498 |
MS.gene04727.t1 | MTR_0009s0370 | 51.181 | 508 | 235 | 7 | 10 | 511 | 9 | 509 | 2.21e-172 | 496 |
MS.gene04727.t1 | MTR_1g104750 | 49.600 | 500 | 245 | 5 | 1 | 497 | 1 | 496 | 5.20e-172 | 495 |
MS.gene04727.t1 | MTR_3g008170 | 49.593 | 492 | 243 | 5 | 21 | 509 | 18 | 507 | 6.06e-168 | 485 |
MS.gene04727.t1 | MTR_1g038600 | 50.797 | 502 | 223 | 6 | 18 | 517 | 15 | 494 | 2.67e-167 | 483 |
MS.gene04727.t1 | MTR_4g091370 | 51.600 | 500 | 236 | 4 | 18 | 513 | 15 | 512 | 3.19e-167 | 483 |
MS.gene04727.t1 | MTR_3g023480 | 49.203 | 502 | 249 | 4 | 15 | 511 | 10 | 510 | 4.53e-165 | 478 |
MS.gene04727.t1 | MTR_3g008160 | 51.293 | 464 | 220 | 4 | 53 | 514 | 1 | 460 | 1.70e-162 | 469 |
MS.gene04727.t1 | MTR_4g090600 | 50.772 | 518 | 244 | 5 | 1 | 511 | 1 | 514 | 4.79e-158 | 460 |
MS.gene04727.t1 | MTR_3g074390 | 46.694 | 484 | 251 | 6 | 21 | 500 | 23 | 503 | 6.94e-156 | 454 |
MS.gene04727.t1 | MTR_3g074270 | 47.012 | 502 | 239 | 7 | 1 | 500 | 1 | 477 | 1.30e-154 | 450 |
MS.gene04727.t1 | MTR_3g007910 | 45.930 | 516 | 235 | 7 | 1 | 510 | 1 | 478 | 4.43e-153 | 446 |
MS.gene04727.t1 | MTR_3g074410 | 45.205 | 511 | 269 | 10 | 1 | 506 | 1 | 505 | 3.40e-151 | 442 |
MS.gene04727.t1 | MTR_3g093060 | 48.107 | 449 | 226 | 4 | 53 | 495 | 1 | 448 | 1.93e-143 | 421 |
MS.gene04727.t1 | MTR_4g116790 | 53.699 | 365 | 163 | 4 | 3 | 366 | 6 | 365 | 3.41e-139 | 407 |
MS.gene04727.t1 | MTR_3g074380 | 49.138 | 348 | 172 | 5 | 21 | 366 | 21 | 365 | 3.58e-111 | 335 |
MS.gene04727.t1 | MTR_3g074320 | 41.745 | 321 | 181 | 5 | 191 | 507 | 20 | 338 | 1.32e-89 | 278 |
MS.gene04727.t1 | MTR_3g074340 | 41.433 | 321 | 182 | 5 | 191 | 507 | 20 | 338 | 9.77e-89 | 276 |
MS.gene04727.t1 | MTR_3g074370 | 41.121 | 321 | 183 | 5 | 191 | 507 | 20 | 338 | 1.13e-87 | 273 |
MS.gene04727.t1 | MTR_3g074400 | 37.168 | 452 | 225 | 14 | 53 | 480 | 1 | 417 | 1.65e-78 | 252 |
MS.gene04727.t1 | MTR_4g072030 | 30.000 | 510 | 305 | 13 | 6 | 493 | 12 | 491 | 1.15e-54 | 192 |
MS.gene04727.t1 | MTR_7g005910 | 28.687 | 495 | 317 | 13 | 11 | 497 | 21 | 487 | 2.85e-53 | 188 |
MS.gene04727.t1 | MTR_8g103500 | 28.216 | 482 | 310 | 10 | 21 | 489 | 13 | 471 | 2.91e-52 | 185 |
MS.gene04727.t1 | MTR_1g116650 | 30.435 | 506 | 309 | 13 | 11 | 511 | 66 | 533 | 3.27e-52 | 186 |
MS.gene04727.t1 | MTR_3g084110 | 28.627 | 510 | 322 | 14 | 10 | 507 | 7 | 486 | 2.48e-51 | 182 |
MS.gene04727.t1 | MTR_4g069500 | 27.096 | 513 | 323 | 13 | 26 | 516 | 29 | 512 | 4.50e-50 | 179 |
MS.gene04727.t1 | MTR_8g077890 | 29.860 | 499 | 305 | 13 | 26 | 501 | 18 | 494 | 5.58e-50 | 179 |
MS.gene04727.t1 | MTR_6g088450 | 28.947 | 456 | 281 | 11 | 39 | 478 | 71 | 499 | 7.16e-50 | 179 |
MS.gene04727.t1 | MTR_2g013310 | 29.218 | 486 | 302 | 14 | 19 | 491 | 46 | 502 | 3.29e-49 | 177 |
MS.gene04727.t1 | MTR_2g013310 | 31.218 | 394 | 249 | 10 | 111 | 491 | 45 | 429 | 4.55e-49 | 175 |
MS.gene04727.t1 | MTR_7g446340 | 27.165 | 508 | 325 | 12 | 19 | 511 | 47 | 524 | 8.12e-49 | 176 |
MS.gene04727.t1 | MTR_6g007340 | 27.165 | 508 | 325 | 12 | 19 | 511 | 47 | 524 | 8.12e-49 | 176 |
MS.gene04727.t1 | MTR_4g069500 | 29.371 | 429 | 269 | 10 | 111 | 516 | 45 | 462 | 1.72e-48 | 174 |
MS.gene04727.t1 | MTR_6g018790 | 31.441 | 458 | 280 | 11 | 32 | 485 | 111 | 538 | 2.38e-48 | 176 |
MS.gene04727.t1 | MTR_3g116240 | 27.801 | 482 | 305 | 9 | 26 | 485 | 27 | 487 | 9.81e-48 | 173 |
MS.gene04727.t1 | MTR_4g077740 | 30.556 | 468 | 285 | 11 | 34 | 485 | 53 | 496 | 1.92e-47 | 172 |
MS.gene04727.t1 | MTR_5g075300 | 29.424 | 486 | 300 | 11 | 26 | 489 | 18 | 482 | 2.11e-47 | 172 |
MS.gene04727.t1 | MTR_7g082270 | 30.853 | 457 | 284 | 10 | 32 | 485 | 71 | 498 | 2.91e-47 | 172 |
MS.gene04727.t1 | MTR_1g116660 | 27.606 | 518 | 332 | 14 | 11 | 507 | 13 | 508 | 1.15e-45 | 167 |
MS.gene04727.t1 | MTR_5g077580 | 26.538 | 569 | 288 | 16 | 18 | 492 | 21 | 553 | 2.97e-45 | 167 |
MS.gene04727.t1 | MTR_2g048720 | 32.845 | 341 | 205 | 7 | 18 | 355 | 21 | 340 | 6.63e-45 | 166 |
MS.gene04727.t1 | MTR_7g082270 | 31.658 | 398 | 243 | 8 | 32 | 428 | 71 | 440 | 7.01e-45 | 164 |
MS.gene04727.t1 | MTR_2g049020 | 30.319 | 376 | 229 | 9 | 18 | 384 | 21 | 372 | 4.26e-43 | 161 |
MS.gene04727.t1 | MTR_6g087910 | 30.556 | 396 | 254 | 8 | 96 | 485 | 102 | 482 | 8.84e-40 | 150 |
MS.gene04727.t1 | MTR_5g020270 | 29.457 | 387 | 254 | 8 | 111 | 490 | 15 | 389 | 1.37e-39 | 148 |
MS.gene04727.t1 | MTR_2g026160 | 29.521 | 376 | 228 | 7 | 23 | 384 | 24 | 376 | 2.93e-39 | 150 |
MS.gene04727.t1 | MTR_5g020270 | 28.883 | 412 | 274 | 8 | 86 | 490 | 90 | 489 | 3.43e-39 | 149 |
MS.gene04727.t1 | MTR_1g022315 | 27.532 | 385 | 265 | 7 | 111 | 490 | 15 | 390 | 3.99e-39 | 147 |
MS.gene04727.t1 | MTR_4g013205 | 27.983 | 461 | 293 | 9 | 31 | 485 | 41 | 468 | 4.18e-39 | 149 |
MS.gene04727.t1 | MTR_1g022315 | 27.317 | 410 | 284 | 7 | 86 | 490 | 89 | 489 | 5.85e-39 | 148 |
MS.gene04727.t1 | MTR_5g096000 | 44.920 | 187 | 80 | 3 | 1 | 187 | 1 | 164 | 3.01e-38 | 142 |
MS.gene04727.t1 | MTR_5g096000 | 48.507 | 134 | 69 | 0 | 377 | 510 | 176 | 309 | 1.12e-32 | 127 |
MS.gene04727.t1 | MTR_8g077300 | 27.465 | 426 | 289 | 9 | 69 | 485 | 59 | 473 | 4.03e-38 | 146 |
MS.gene04727.t1 | MTR_7g113970 | 27.494 | 411 | 280 | 8 | 86 | 492 | 102 | 498 | 4.39e-38 | 146 |
MS.gene04727.t1 | MTR_5g019870 | 28.176 | 433 | 283 | 9 | 81 | 489 | 51 | 479 | 1.08e-37 | 145 |
MS.gene04727.t1 | MTR_3g080240 | 29.471 | 397 | 259 | 13 | 96 | 485 | 145 | 527 | 1.31e-37 | 145 |
MS.gene04727.t1 | MTR_8g077310 | 27.833 | 406 | 276 | 9 | 86 | 485 | 87 | 481 | 1.78e-37 | 144 |
MS.gene04727.t1 | MTR_8g077310 | 28.346 | 381 | 256 | 9 | 111 | 485 | 15 | 384 | 2.83e-37 | 142 |
MS.gene04727.t1 | MTR_7g113960 | 28.010 | 407 | 267 | 10 | 86 | 485 | 67 | 454 | 5.47e-37 | 143 |
MS.gene04727.t1 | MTR_3g074330 | 46.914 | 162 | 75 | 3 | 1 | 155 | 1 | 158 | 8.04e-37 | 134 |
MS.gene04727.t1 | MTR_3g074360 | 46.914 | 162 | 75 | 3 | 1 | 155 | 1 | 158 | 8.04e-37 | 134 |
MS.gene04727.t1 | MTR_7g094450 | 28.288 | 403 | 273 | 7 | 86 | 485 | 80 | 469 | 1.32e-36 | 141 |
MS.gene04727.t1 | MTR_3g074310 | 46.296 | 162 | 76 | 3 | 1 | 155 | 1 | 158 | 4.39e-36 | 132 |
MS.gene04727.t1 | MTR_1g038620 | 40.881 | 159 | 76 | 1 | 206 | 364 | 50 | 190 | 3.19e-34 | 128 |
MS.gene04727.t1 | MTR_5g020270 | 26.988 | 415 | 257 | 8 | 86 | 490 | 90 | 468 | 6.33e-33 | 131 |
MS.gene04727.t1 | MTR_7g094110 | 26.483 | 472 | 307 | 12 | 18 | 485 | 36 | 471 | 5.56e-32 | 128 |
MS.gene04727.t1 | MTR_0064s0040 | 42.857 | 147 | 71 | 2 | 18 | 164 | 16 | 149 | 1.99e-31 | 119 |
MS.gene04727.t1 | MTR_2g020710 | 28.431 | 408 | 267 | 10 | 86 | 485 | 89 | 479 | 8.63e-31 | 125 |
MS.gene04727.t1 | MTR_2g020710 | 28.501 | 407 | 266 | 10 | 87 | 485 | 1 | 390 | 1.14e-30 | 123 |
MS.gene04727.t1 | MTR_4g069500 | 27.711 | 332 | 207 | 9 | 207 | 516 | 3 | 323 | 2.33e-30 | 121 |
MS.gene04727.t1 | MTR_2g026140 | 28.177 | 362 | 211 | 9 | 36 | 383 | 34 | 360 | 4.79e-30 | 124 |
MS.gene04727.t1 | MTR_4g118610 | 28.325 | 406 | 270 | 12 | 86 | 485 | 92 | 482 | 3.33e-29 | 120 |
MS.gene04727.t1 | MTR_8g077310 | 27.304 | 293 | 200 | 6 | 86 | 375 | 87 | 369 | 1.20e-27 | 115 |
MS.gene04727.t1 | MTR_4g064820 | 30.000 | 340 | 204 | 8 | 34 | 355 | 104 | 427 | 1.56e-26 | 113 |
MS.gene04727.t1 | MTR_7g113960 | 29.818 | 275 | 175 | 6 | 86 | 355 | 67 | 328 | 3.25e-26 | 110 |
MS.gene04727.t1 | MTR_7g113970 | 29.304 | 273 | 179 | 6 | 86 | 355 | 102 | 363 | 4.71e-26 | 110 |
MS.gene04727.t1 | MTR_7g094110 | 26.119 | 402 | 263 | 7 | 86 | 485 | 82 | 451 | 5.38e-25 | 108 |
MS.gene04727.t1 | MTR_5g044910 | 30.508 | 177 | 122 | 1 | 87 | 262 | 47 | 223 | 5.52e-22 | 100 |
MS.gene04727.t1 | MTR_5g044910 | 30.328 | 244 | 147 | 10 | 261 | 489 | 472 | 707 | 6.83e-11 | 65.5 |
MS.gene04727.t1 | MTR_5g024740 | 28.936 | 235 | 146 | 4 | 30 | 262 | 8 | 223 | 5.90e-22 | 100 |
MS.gene04727.t1 | MTR_2g020710 | 28.319 | 339 | 218 | 10 | 86 | 416 | 89 | 410 | 9.72e-22 | 98.2 |
MS.gene04727.t1 | MTR_2g020710 | 28.402 | 338 | 217 | 10 | 86 | 415 | 89 | 409 | 1.12e-21 | 97.8 |
MS.gene04727.t1 | MTR_2g020710 | 31.022 | 274 | 166 | 9 | 86 | 351 | 89 | 347 | 7.97e-21 | 94.7 |
MS.gene04727.t1 | MTR_3g116060 | 31.902 | 163 | 110 | 1 | 96 | 257 | 54 | 216 | 2.24e-20 | 95.1 |
MS.gene04727.t1 | MTR_3g116060 | 28.085 | 235 | 149 | 7 | 269 | 490 | 491 | 718 | 5.01e-12 | 68.9 |
MS.gene04727.t1 | MTR_8g073100 | 26.027 | 219 | 154 | 2 | 71 | 281 | 31 | 249 | 5.59e-20 | 94.0 |
MS.gene04727.t1 | MTR_8g073100 | 29.437 | 231 | 144 | 7 | 271 | 489 | 482 | 705 | 1.13e-12 | 70.9 |
MS.gene04727.t1 | MTR_1g114280 | 34.177 | 158 | 83 | 3 | 350 | 505 | 21 | 159 | 2.12e-19 | 85.9 |
MS.gene04727.t1 | MTR_4g118610 | 28.402 | 338 | 219 | 12 | 86 | 416 | 92 | 413 | 1.63e-18 | 88.2 |
MS.gene04727.t1 | MTR_3g118530 | 29.787 | 188 | 131 | 1 | 71 | 257 | 31 | 218 | 4.64e-17 | 85.1 |
MS.gene04727.t1 | MTR_3g118530 | 32.515 | 163 | 109 | 1 | 96 | 257 | 56 | 218 | 1.05e-16 | 83.6 |
MS.gene04727.t1 | MTR_6g006260 | 34.921 | 126 | 75 | 4 | 237 | 355 | 27 | 152 | 2.85e-11 | 63.9 |
MS.gene04727.t1 | MTR_6g006260 | 33.884 | 121 | 74 | 3 | 241 | 355 | 33 | 153 | 5.84e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene04727.t1 | AT1G77210 | 69.261 | 501 | 154 | 0 | 1 | 501 | 1 | 501 | 0.0 | 737 |
MS.gene04727.t1 | AT1G77210 | 69.261 | 501 | 154 | 0 | 1 | 501 | 1 | 501 | 0.0 | 737 |
MS.gene04727.t1 | AT4G02050 | 57.505 | 513 | 213 | 4 | 1 | 511 | 1 | 510 | 0.0 | 598 |
MS.gene04727.t1 | AT4G02050 | 57.505 | 513 | 213 | 4 | 1 | 511 | 1 | 510 | 0.0 | 598 |
MS.gene04727.t1 | AT5G26340 | 53.155 | 523 | 230 | 7 | 1 | 512 | 1 | 519 | 0.0 | 551 |
MS.gene04727.t1 | AT3G19940 | 51.767 | 481 | 229 | 2 | 23 | 501 | 22 | 501 | 0.0 | 525 |
MS.gene04727.t1 | AT1G50310 | 50.610 | 492 | 239 | 3 | 23 | 511 | 22 | 512 | 0.0 | 520 |
MS.gene04727.t1 | AT1G77210 | 68.946 | 351 | 108 | 1 | 155 | 505 | 6 | 355 | 3.83e-179 | 507 |
MS.gene04727.t1 | AT3G19930 | 51.163 | 516 | 238 | 7 | 4 | 510 | 3 | 513 | 5.62e-177 | 508 |
MS.gene04727.t1 | AT3G19930 | 51.163 | 516 | 238 | 7 | 4 | 510 | 3 | 513 | 5.62e-177 | 508 |
MS.gene04727.t1 | AT5G23270 | 52.000 | 500 | 231 | 7 | 1 | 495 | 1 | 496 | 4.91e-176 | 506 |
MS.gene04727.t1 | AT1G11260 | 48.846 | 520 | 255 | 6 | 1 | 513 | 1 | 516 | 2.11e-171 | 494 |
MS.gene04727.t1 | AT4G21480 | 51.318 | 493 | 233 | 4 | 10 | 499 | 9 | 497 | 4.57e-169 | 488 |
MS.gene04727.t1 | AT5G26250 | 48.589 | 496 | 250 | 4 | 18 | 511 | 14 | 506 | 6.05e-166 | 479 |
MS.gene04727.t1 | AT3G05960 | 48.589 | 496 | 250 | 4 | 14 | 507 | 9 | 501 | 3.27e-165 | 478 |
MS.gene04727.t1 | AT1G34580 | 47.140 | 507 | 256 | 7 | 1 | 500 | 1 | 502 | 1.91e-154 | 450 |
MS.gene04727.t1 | AT5G61520 | 46.545 | 492 | 255 | 4 | 21 | 506 | 19 | 508 | 2.90e-152 | 445 |
MS.gene04727.t1 | AT1G07340 | 46.600 | 500 | 259 | 7 | 5 | 501 | 4 | 498 | 1.85e-148 | 435 |
MS.gene04727.t1 | AT1G34580 | 47.253 | 455 | 230 | 6 | 53 | 500 | 1 | 452 | 4.82e-140 | 412 |
MS.gene04727.t1 | AT5G61520 | 45.987 | 461 | 241 | 4 | 52 | 506 | 2 | 460 | 1.79e-138 | 408 |
MS.gene04727.t1 | AT1G50310 | 48.333 | 360 | 182 | 3 | 155 | 511 | 11 | 369 | 2.00e-121 | 361 |
MS.gene04727.t1 | AT4G36670 | 31.633 | 490 | 289 | 13 | 26 | 492 | 16 | 482 | 1.47e-60 | 207 |
MS.gene04727.t1 | AT2G18480 | 31.610 | 503 | 291 | 13 | 11 | 489 | 10 | 483 | 6.48e-57 | 198 |
MS.gene04727.t1 | AT2G16130 | 30.346 | 491 | 299 | 10 | 24 | 492 | 23 | 492 | 1.14e-56 | 197 |
MS.gene04727.t1 | AT2G16120 | 29.084 | 502 | 315 | 8 | 26 | 506 | 25 | 506 | 5.04e-55 | 193 |
MS.gene04727.t1 | AT3G18830 | 26.706 | 513 | 319 | 13 | 26 | 514 | 35 | 514 | 9.68e-51 | 182 |
MS.gene04727.t1 | AT2G43330 | 28.764 | 518 | 328 | 14 | 11 | 512 | 9 | 501 | 2.87e-48 | 174 |
MS.gene04727.t1 | AT5G16150 | 31.304 | 460 | 282 | 11 | 32 | 487 | 111 | 540 | 5.75e-46 | 169 |
MS.gene04727.t1 | AT5G16150 | 31.304 | 460 | 282 | 11 | 32 | 487 | 111 | 540 | 5.75e-46 | 169 |
MS.gene04727.t1 | AT5G16150 | 31.304 | 460 | 282 | 11 | 32 | 487 | 111 | 540 | 5.75e-46 | 169 |
MS.gene04727.t1 | AT5G17010 | 30.266 | 489 | 301 | 11 | 13 | 485 | 34 | 498 | 5.72e-45 | 165 |
MS.gene04727.t1 | AT5G17010 | 30.266 | 489 | 301 | 11 | 13 | 485 | 34 | 498 | 5.72e-45 | 165 |
MS.gene04727.t1 | AT5G17010 | 30.266 | 489 | 301 | 11 | 13 | 485 | 34 | 498 | 5.72e-45 | 165 |
MS.gene04727.t1 | AT1G30220 | 30.809 | 383 | 225 | 10 | 4 | 370 | 3 | 361 | 4.26e-44 | 164 |
MS.gene04727.t1 | AT1G75220 | 31.959 | 388 | 243 | 10 | 111 | 490 | 113 | 487 | 1.54e-42 | 158 |
MS.gene04727.t1 | AT4G16480 | 29.949 | 394 | 246 | 9 | 1 | 383 | 1 | 375 | 1.92e-42 | 160 |
MS.gene04727.t1 | AT4G16480 | 29.949 | 394 | 246 | 9 | 1 | 383 | 1 | 375 | 1.92e-42 | 160 |
MS.gene04727.t1 | AT4G16480 | 29.949 | 394 | 246 | 9 | 1 | 383 | 1 | 375 | 1.92e-42 | 160 |
MS.gene04727.t1 | AT3G03090 | 30.407 | 467 | 287 | 9 | 34 | 485 | 55 | 498 | 2.72e-42 | 158 |
MS.gene04727.t1 | AT2G20780 | 27.647 | 510 | 321 | 12 | 13 | 507 | 42 | 518 | 8.97e-42 | 157 |
MS.gene04727.t1 | AT2G20780 | 29.955 | 444 | 287 | 11 | 79 | 507 | 26 | 460 | 1.63e-41 | 155 |
MS.gene04727.t1 | AT1G19450 | 31.525 | 387 | 246 | 9 | 111 | 490 | 114 | 488 | 9.85e-41 | 153 |
MS.gene04727.t1 | AT1G08930 | 28.261 | 414 | 273 | 11 | 86 | 492 | 98 | 494 | 9.36e-40 | 151 |
MS.gene04727.t1 | AT1G08930 | 28.261 | 414 | 273 | 11 | 86 | 492 | 98 | 494 | 9.36e-40 | 151 |
MS.gene04727.t1 | AT1G05030 | 29.540 | 413 | 271 | 13 | 82 | 487 | 64 | 463 | 1.03e-39 | 150 |
MS.gene04727.t1 | AT1G05030 | 29.540 | 413 | 271 | 13 | 82 | 487 | 116 | 515 | 1.11e-39 | 151 |
MS.gene04727.t1 | AT5G27360 | 30.990 | 384 | 237 | 10 | 111 | 485 | 100 | 464 | 3.00e-39 | 149 |
MS.gene04727.t1 | AT5G59250 | 29.325 | 474 | 286 | 11 | 34 | 485 | 106 | 552 | 5.59e-39 | 149 |
MS.gene04727.t1 | AT5G27360 | 30.990 | 384 | 237 | 10 | 111 | 485 | 148 | 512 | 5.85e-39 | 149 |
MS.gene04727.t1 | AT2G35740 | 28.333 | 360 | 229 | 7 | 35 | 384 | 35 | 375 | 7.64e-39 | 149 |
MS.gene04727.t1 | AT3G05155 | 27.696 | 408 | 267 | 10 | 86 | 485 | 67 | 454 | 1.19e-38 | 147 |
MS.gene04727.t1 | AT5G27360 | 30.769 | 377 | 233 | 10 | 118 | 485 | 3 | 360 | 1.07e-37 | 142 |
MS.gene04727.t1 | AT5G27360 | 30.769 | 377 | 233 | 10 | 118 | 485 | 3 | 360 | 1.07e-37 | 142 |
MS.gene04727.t1 | AT3G05400 | 28.744 | 414 | 269 | 12 | 86 | 491 | 66 | 461 | 3.69e-37 | 143 |
MS.gene04727.t1 | AT2G48020 | 26.866 | 402 | 280 | 6 | 86 | 485 | 68 | 457 | 4.13e-37 | 143 |
MS.gene04727.t1 | AT2G48020 | 26.866 | 402 | 280 | 6 | 86 | 485 | 68 | 457 | 4.13e-37 | 143 |
MS.gene04727.t1 | AT5G27350 | 28.643 | 398 | 258 | 10 | 96 | 485 | 81 | 460 | 6.06e-37 | 142 |
MS.gene04727.t1 | AT1G67300 | 26.905 | 420 | 275 | 8 | 31 | 448 | 56 | 445 | 4.10e-36 | 140 |
MS.gene04727.t1 | AT1G67300 | 26.905 | 420 | 275 | 8 | 31 | 448 | 56 | 445 | 4.10e-36 | 140 |
MS.gene04727.t1 | AT3G05165 | 27.251 | 422 | 286 | 9 | 68 | 485 | 55 | 459 | 1.05e-35 | 139 |
MS.gene04727.t1 | AT3G05165 | 27.251 | 422 | 286 | 9 | 68 | 485 | 55 | 459 | 1.05e-35 | 139 |
MS.gene04727.t1 | AT3G05165 | 27.251 | 422 | 286 | 9 | 68 | 485 | 55 | 459 | 1.05e-35 | 139 |
MS.gene04727.t1 | AT1G67300 | 27.646 | 463 | 295 | 11 | 31 | 485 | 56 | 486 | 1.35e-35 | 139 |
MS.gene04727.t1 | AT1G08900 | 28.010 | 407 | 269 | 8 | 86 | 485 | 23 | 412 | 2.03e-35 | 137 |
MS.gene04727.t1 | AT3G05160 | 28.000 | 425 | 279 | 11 | 68 | 485 | 46 | 450 | 2.12e-35 | 138 |
MS.gene04727.t1 | AT1G54730 | 26.551 | 403 | 280 | 7 | 86 | 485 | 72 | 461 | 2.33e-35 | 138 |
MS.gene04727.t1 | AT3G05160 | 28.029 | 421 | 276 | 11 | 72 | 485 | 1 | 401 | 2.85e-35 | 137 |
MS.gene04727.t1 | AT3G05160 | 28.029 | 421 | 276 | 11 | 72 | 485 | 1 | 401 | 2.85e-35 | 137 |
MS.gene04727.t1 | AT1G08900 | 28.010 | 407 | 269 | 8 | 86 | 485 | 65 | 454 | 3.02e-35 | 137 |
MS.gene04727.t1 | AT1G08900 | 28.010 | 407 | 269 | 8 | 86 | 485 | 65 | 454 | 3.02e-35 | 137 |
MS.gene04727.t1 | AT1G08900 | 28.010 | 407 | 269 | 8 | 86 | 485 | 57 | 446 | 3.18e-35 | 137 |
MS.gene04727.t1 | AT1G67300 | 27.549 | 461 | 297 | 10 | 31 | 485 | 56 | 485 | 9.10e-35 | 137 |
MS.gene04727.t1 | AT1G67300 | 27.549 | 461 | 297 | 10 | 31 | 485 | 56 | 485 | 9.10e-35 | 137 |
MS.gene04727.t1 | AT3G05400 | 29.504 | 383 | 237 | 13 | 124 | 491 | 77 | 441 | 1.17e-34 | 135 |
MS.gene04727.t1 | AT1G67300 | 26.817 | 399 | 262 | 7 | 31 | 427 | 56 | 426 | 1.60e-34 | 135 |
MS.gene04727.t1 | AT1G67300 | 26.817 | 399 | 262 | 7 | 31 | 427 | 56 | 426 | 1.60e-34 | 135 |
MS.gene04727.t1 | AT1G79820 | 27.056 | 462 | 296 | 11 | 31 | 485 | 59 | 486 | 1.12e-33 | 134 |
MS.gene04727.t1 | AT1G79820 | 27.056 | 462 | 296 | 11 | 31 | 485 | 59 | 486 | 1.12e-33 | 134 |
MS.gene04727.t1 | AT4G04760 | 28.605 | 430 | 282 | 7 | 68 | 492 | 2 | 411 | 4.93e-33 | 130 |
MS.gene04727.t1 | AT4G04750 | 29.457 | 387 | 255 | 7 | 111 | 492 | 145 | 518 | 7.49e-33 | 132 |
MS.gene04727.t1 | AT4G04750 | 29.457 | 387 | 255 | 7 | 111 | 492 | 101 | 474 | 9.14e-33 | 131 |
MS.gene04727.t1 | AT4G04750 | 29.457 | 387 | 255 | 7 | 111 | 492 | 101 | 474 | 9.14e-33 | 131 |
MS.gene04727.t1 | AT4G04760 | 28.605 | 430 | 282 | 7 | 68 | 492 | 61 | 470 | 1.14e-32 | 130 |
MS.gene04727.t1 | AT1G08890 | 27.114 | 402 | 279 | 8 | 86 | 485 | 67 | 456 | 1.17e-32 | 130 |
MS.gene04727.t1 | AT3G05150 | 28.362 | 409 | 266 | 12 | 86 | 485 | 75 | 465 | 2.00e-32 | 130 |
MS.gene04727.t1 | AT3G05150 | 28.362 | 409 | 266 | 12 | 86 | 485 | 75 | 465 | 2.00e-32 | 130 |
MS.gene04727.t1 | AT3G05150 | 28.362 | 409 | 266 | 12 | 86 | 485 | 75 | 465 | 2.21e-32 | 130 |
MS.gene04727.t1 | AT1G08920 | 27.518 | 407 | 271 | 12 | 86 | 485 | 72 | 461 | 2.29e-32 | 129 |
MS.gene04727.t1 | AT5G18840 | 28.117 | 409 | 267 | 11 | 86 | 485 | 84 | 474 | 2.62e-32 | 129 |
MS.gene04727.t1 | AT1G08920 | 27.053 | 414 | 271 | 12 | 86 | 485 | 72 | 468 | 2.93e-31 | 126 |
MS.gene04727.t1 | AT1G54730 | 25.967 | 362 | 252 | 7 | 86 | 444 | 72 | 420 | 3.55e-31 | 125 |
MS.gene04727.t1 | AT3G05165 | 27.869 | 366 | 243 | 9 | 68 | 429 | 55 | 403 | 7.75e-31 | 125 |
MS.gene04727.t1 | AT3G05165 | 27.869 | 366 | 243 | 9 | 68 | 429 | 55 | 403 | 8.43e-31 | 125 |
MS.gene04727.t1 | AT3G05165 | 27.869 | 366 | 243 | 9 | 68 | 429 | 55 | 403 | 8.43e-31 | 125 |
MS.gene04727.t1 | AT1G79820 | 26.277 | 411 | 263 | 10 | 31 | 435 | 59 | 435 | 9.08e-31 | 124 |
MS.gene04727.t1 | AT1G54730 | 25.373 | 402 | 265 | 7 | 86 | 485 | 72 | 440 | 8.42e-30 | 122 |
MS.gene04727.t1 | AT4G04760 | 28.668 | 443 | 262 | 9 | 68 | 492 | 61 | 467 | 6.98e-29 | 119 |
MS.gene04727.t1 | AT1G08900 | 27.596 | 366 | 241 | 8 | 86 | 444 | 65 | 413 | 1.40e-28 | 118 |
MS.gene04727.t1 | AT1G08920 | 27.548 | 363 | 239 | 12 | 86 | 441 | 72 | 417 | 4.31e-28 | 117 |
MS.gene04727.t1 | AT5G27360 | 29.814 | 322 | 196 | 10 | 111 | 422 | 100 | 401 | 2.28e-26 | 112 |
MS.gene04727.t1 | AT3G05155 | 28.881 | 277 | 172 | 8 | 86 | 355 | 67 | 325 | 7.60e-26 | 108 |
MS.gene04727.t1 | AT1G54730 | 24.654 | 361 | 237 | 7 | 86 | 444 | 72 | 399 | 1.57e-25 | 109 |
MS.gene04727.t1 | AT1G54730 | 25.749 | 334 | 232 | 7 | 86 | 416 | 72 | 392 | 2.25e-25 | 108 |
MS.gene04727.t1 | AT1G54730 | 25.749 | 334 | 232 | 7 | 86 | 416 | 72 | 392 | 2.25e-25 | 108 |
MS.gene04727.t1 | AT3G20460 | 25.995 | 377 | 265 | 6 | 111 | 485 | 118 | 482 | 3.65e-25 | 108 |
MS.gene04727.t1 | AT2G48020 | 28.223 | 287 | 194 | 5 | 86 | 370 | 68 | 344 | 7.80e-25 | 106 |
MS.gene04727.t1 | AT1G54730 | 27.206 | 272 | 186 | 5 | 86 | 355 | 72 | 333 | 2.50e-24 | 104 |
MS.gene04727.t1 | AT2G48020 | 28.676 | 272 | 182 | 5 | 86 | 355 | 68 | 329 | 4.88e-24 | 103 |
MS.gene04727.t1 | AT3G51490 | 27.273 | 231 | 149 | 3 | 28 | 257 | 6 | 218 | 1.76e-22 | 102 |
MS.gene04727.t1 | AT3G51490 | 27.273 | 231 | 149 | 3 | 28 | 257 | 6 | 218 | 1.91e-22 | 101 |
MS.gene04727.t1 | AT5G17010 | 25.813 | 492 | 259 | 15 | 13 | 485 | 31 | 435 | 2.38e-22 | 100 |
MS.gene04727.t1 | AT1G79820 | 24.026 | 462 | 262 | 10 | 31 | 485 | 59 | 438 | 4.26e-22 | 99.4 |
MS.gene04727.t1 | AT1G54730 | 26.613 | 248 | 173 | 4 | 86 | 331 | 72 | 312 | 2.38e-21 | 95.5 |
MS.gene04727.t1 | AT1G54730 | 26.613 | 248 | 173 | 4 | 86 | 331 | 72 | 312 | 2.38e-21 | 95.5 |
MS.gene04727.t1 | AT3G51490 | 31.288 | 163 | 111 | 1 | 96 | 257 | 6 | 168 | 4.38e-21 | 97.4 |
MS.gene04727.t1 | AT1G54730 | 24.324 | 333 | 217 | 7 | 86 | 416 | 72 | 371 | 9.62e-20 | 91.7 |
MS.gene04727.t1 | AT4G35300 | 33.108 | 148 | 98 | 1 | 111 | 257 | 71 | 218 | 1.56e-17 | 86.3 |
MS.gene04727.t1 | AT4G35300 | 33.108 | 148 | 98 | 1 | 111 | 257 | 71 | 218 | 1.56e-17 | 86.3 |
MS.gene04727.t1 | AT4G35300 | 33.108 | 148 | 98 | 1 | 111 | 257 | 71 | 218 | 1.56e-17 | 86.3 |
MS.gene04727.t1 | AT4G35300 | 33.108 | 148 | 98 | 1 | 111 | 257 | 71 | 218 | 1.80e-17 | 86.3 |
MS.gene04727.t1 | AT4G35300 | 33.108 | 148 | 98 | 1 | 111 | 257 | 71 | 218 | 1.80e-17 | 86.3 |
MS.gene04727.t1 | AT4G35300 | 33.108 | 148 | 98 | 1 | 111 | 257 | 71 | 218 | 1.80e-17 | 86.3 |
MS.gene04727.t1 | AT4G35300 | 33.108 | 148 | 98 | 1 | 111 | 257 | 71 | 218 | 1.80e-17 | 86.3 |
MS.gene04727.t1 | AT4G35300 | 33.108 | 148 | 98 | 1 | 111 | 257 | 71 | 218 | 1.80e-17 | 86.3 |
MS.gene04727.t1 | AT4G35300 | 33.108 | 148 | 98 | 1 | 111 | 257 | 71 | 218 | 1.80e-17 | 86.3 |
MS.gene04727.t1 | AT4G35300 | 33.108 | 148 | 98 | 1 | 111 | 257 | 71 | 218 | 1.80e-17 | 86.3 |
MS.gene04727.t1 | AT1G79820 | 25.000 | 368 | 201 | 9 | 127 | 485 | 75 | 376 | 3.21e-17 | 84.0 |
MS.gene04727.t1 | AT1G20840 | 30.061 | 163 | 113 | 1 | 96 | 257 | 54 | 216 | 5.25e-17 | 84.7 |
MS.gene04727.t1 | AT1G20840 | 30.061 | 163 | 113 | 1 | 96 | 257 | 54 | 216 | 5.25e-17 | 84.7 |
Find 118 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTATGATCTTGGTGTTTC+AGG | 0.146740 | 4.2:+2516903 | MS.gene04727:CDS |
CTCTTTAGAAGTACCTTAAA+TGG | 0.220345 | 4.2:-2519182 | None:intergenic |
ATTGGAACTTGCTTTGTTTC+CGG | 0.222640 | 4.2:-2520112 | None:intergenic |
TCACTTTGTCACCTCAAATA+TGG | 0.230568 | 4.2:+2520028 | MS.gene04727:CDS |
CTGTCATCTTCCAGAGTTTA+GGG | 0.232231 | 4.2:+2519294 | MS.gene04727:CDS |
TCCAGCAGTTCTAATGCTTC+TGG | 0.238002 | 4.2:+2519001 | MS.gene04727:CDS |
TCATTTCAAAACCAGCTTCT+AGG | 0.240322 | 4.2:-2519427 | None:intergenic |
AGCTGTGAAGAGTCCATTTA+AGG | 0.249513 | 4.2:+2519169 | MS.gene04727:CDS |
CTTGGTGGAGGCATTGGCTT+TGG | 0.254131 | 4.2:+2518518 | MS.gene04727:CDS |
CCTTGCTCCACAAGGCTGTT+AGG | 0.284660 | 4.2:-2519047 | None:intergenic |
GATTATTACTGCTGTGGTTT+TGG | 0.286671 | 4.2:+2519784 | MS.gene04727:intron |
ACCTGTGTTGTTGGAGCTCT+TGG | 0.289586 | 4.2:+2516867 | MS.gene04727:CDS |
CTTTGTATTCTTTCTATTGC+CGG | 0.291986 | 4.2:+2520093 | MS.gene04727:CDS |
GGAGCTCTTAGCTTTCTTAT+TGG | 0.307849 | 4.2:+2518437 | MS.gene04727:CDS |
TTCTCCCCTTGTTTCTTGTT+AGG | 0.312372 | 4.2:-2518397 | None:intergenic |
CCAGCATTCCAACAGTTAAC+AGG | 0.327650 | 4.2:+2519245 | MS.gene04727:CDS |
TACAGGCCCCAACTGATAAT+AGG | 0.330115 | 4.2:+2519209 | MS.gene04727:CDS |
CCTGTCATCTTCCAGAGTTT+AGG | 0.331497 | 4.2:+2519293 | MS.gene04727:CDS |
TCTTTGAAAACCATTGGTTT+TGG | 0.335279 | 4.2:+2520152 | MS.gene04727:CDS |
ACAGGCCCCAACTGATAATA+GGG | 0.346683 | 4.2:+2519210 | MS.gene04727:CDS |
CAACTGATAATAGGGGCATT+AGG | 0.347092 | 4.2:+2519218 | MS.gene04727:CDS |
TTTGCCTTTACCTGTGTTGT+TGG | 0.347543 | 4.2:+2516858 | MS.gene04727:CDS |
GCAGCTGACCTTATCTCTAA+TGG | 0.361612 | 4.2:-2519941 | None:intergenic |
ATCTTCCTTGGTGGAGGCAT+TGG | 0.364383 | 4.2:+2518512 | MS.gene04727:CDS |
ATCTTCCAGAGTTTAGGGTT+TGG | 0.374188 | 4.2:+2519299 | MS.gene04727:CDS |
AACTGATAATAGGGGCATTA+GGG | 0.375906 | 4.2:+2519219 | MS.gene04727:CDS |
TGCTTCTTTCTGTACACGTC+CGG | 0.377741 | 4.2:-2518266 | None:intergenic |
TAATGCCCCTATTATCAGTT+GGG | 0.378285 | 4.2:-2519216 | None:intergenic |
TTTCTTAGAGAAATTCTTCC+CGG | 0.378764 | 4.2:+2518247 | MS.gene04727:CDS |
GCAAGAAGATTCCATATTTG+AGG | 0.401575 | 4.2:-2520039 | None:intergenic |
AGAAGATAAATCTCTTCAAT+TGG | 0.408127 | 4.2:-2520130 | None:intergenic |
CCAGCAGTTCTAATGCTTCT+GGG | 0.408301 | 4.2:+2519002 | MS.gene04727:CDS |
CCTGTTAACTGTTGGAATGC+TGG | 0.409183 | 4.2:-2519245 | None:intergenic |
ACTGCTCCTCGGCTGCTAGC+TGG | 0.417025 | 4.2:-2518861 | None:intergenic |
TGTTGGCATATGGAAGATCT+TGG | 0.418368 | 4.2:+2519882 | MS.gene04727:CDS |
ATCTTCTCTTTGAAAACCAT+TGG | 0.428353 | 4.2:+2520146 | MS.gene04727:CDS |
CCCAGAAGCATTAGAACTGC+TGG | 0.428615 | 4.2:-2519002 | None:intergenic |
GAGCCATTTCAGATAGATAC+AGG | 0.430764 | 4.2:-2518839 | None:intergenic |
CACTTGGAACCAACCATCCT+AGG | 0.430798 | 4.2:-2519910 | None:intergenic |
TTCTTGTTTGTGTTGGCATA+TGG | 0.434773 | 4.2:+2519872 | MS.gene04727:CDS |
TGGAATCTTAATTGCGAACT+TGG | 0.435954 | 4.2:+2518914 | MS.gene04727:CDS |
AAAGTGTTGGAGAAAGTTAG+AGG | 0.436343 | 4.2:+2519089 | MS.gene04727:CDS |
TTGGAGAATATCACTTGGTT+TGG | 0.436397 | 4.2:+2518971 | MS.gene04727:CDS |
AGAAAGTTCTTCCTAGAAGC+TGG | 0.449357 | 4.2:+2519416 | MS.gene04727:CDS |
TCCCCTGTATCTATCTGAAA+TGG | 0.452778 | 4.2:+2518836 | MS.gene04727:CDS |
AGAATATCACTTGGTTTGGC+AGG | 0.453389 | 4.2:+2518975 | MS.gene04727:CDS |
AGCTCTTTCCATTAGAGATA+AGG | 0.454600 | 4.2:+2519933 | MS.gene04727:CDS |
ATTCTACCAATGATTAGAGT+TGG | 0.461692 | 4.2:-2518491 | None:intergenic |
TTGGGGTCCCCTAGGATGGT+TGG | 0.468276 | 4.2:+2519901 | MS.gene04727:CDS |
AACATTCCAACTCTAATCAT+TGG | 0.470169 | 4.2:+2518485 | MS.gene04727:CDS |
GTCAGGTGGGGTGACTTCAA+TGG | 0.471001 | 4.2:+2518220 | MS.gene04727:intron |
CCCCTTGTTTCTTGTTAGGT+AGG | 0.472750 | 4.2:-2518393 | None:intergenic |
AGTTATTTCCTGTTAACTGT+TGG | 0.476193 | 4.2:-2519253 | None:intergenic |
GTTGGCATATGGAAGATCTT+GGG | 0.482950 | 4.2:+2519883 | MS.gene04727:CDS |
GAGAGAGTAATGGCTGGTGG+AGG | 0.485292 | 4.2:+2516774 | None:intergenic |
TGTGTTGTTGGAGCTCTTGG+TGG | 0.486441 | 4.2:+2516870 | MS.gene04727:CDS |
AACAAGAAACAAGGGGAGAA+AGG | 0.488253 | 4.2:+2518400 | MS.gene04727:CDS |
TACTTCTAAAGAGGAAGTAC+AGG | 0.489201 | 4.2:+2519192 | MS.gene04727:CDS |
CATTTAAGGTACTTCTAAAG+AGG | 0.494012 | 4.2:+2519183 | MS.gene04727:CDS |
GATCTTGGGGTCCCCTAGGA+TGG | 0.494105 | 4.2:+2519897 | MS.gene04727:CDS |
AGCTCCAACAACACAGGTAA+AGG | 0.494445 | 4.2:-2516862 | None:intergenic |
TTTCAGTTCACAACATGTGC+TGG | 0.495855 | 4.2:+2518894 | MS.gene04727:CDS |
CAAGAGCAAGGAAAATCAAA+CGG | 0.498826 | 4.2:+2520202 | MS.gene04727:CDS |
AGAAAGGCCACTATCATAGT+AGG | 0.498842 | 4.2:+2518416 | MS.gene04727:CDS |
AAGAGCTCCTACTATGATAG+TGG | 0.505614 | 4.2:-2518423 | None:intergenic |
GGATTGACAAATGGAGGTCC+AGG | 0.506016 | 4.2:+2516795 | MS.gene04727:CDS |
TCTAATGGAAAGAGCTCACT+TGG | 0.514300 | 4.2:-2519926 | None:intergenic |
AGCAACAAGGAGAGCTCCAT+TGG | 0.515868 | 4.2:-2519354 | None:intergenic |
ATTGGTAGAATCTTCCTTGG+TGG | 0.519908 | 4.2:+2518503 | MS.gene04727:CDS |
ACAAAATTCATCCTCATGGT+TGG | 0.520507 | 4.2:+2518952 | MS.gene04727:CDS |
CAATGTTCTTCCAAAACCAA+TGG | 0.520588 | 4.2:-2520162 | None:intergenic |
CCTTGTGGAGCAAGGAAGGT+TGG | 0.522836 | 4.2:+2519055 | MS.gene04727:CDS |
GACAGGTGCATAGAAGAGAA+TGG | 0.523689 | 4.2:-2519276 | None:intergenic |
ATCATTGGTAGAATCTTCCT+TGG | 0.524104 | 4.2:+2518500 | MS.gene04727:CDS |
TGGAAGAACATTGTAAGAGA+AGG | 0.526683 | 4.2:+2520172 | MS.gene04727:CDS |
GCTGGTGGAGGATTGACAAA+TGG | 0.529097 | 4.2:+2516786 | MS.gene04727:CDS |
ACTTGGAACCAACCATCCTA+GGG | 0.530757 | 4.2:-2519909 | None:intergenic |
GCTTCTTTCTGTACACGTCC+GGG | 0.531563 | 4.2:-2518265 | None:intergenic |
CATGGCAAAGAACTTTCAAA+AGG | 0.531713 | 4.2:+2519821 | MS.gene04727:CDS |
AGAGAGAGAGTAATGGCTGG+TGG | 0.532868 | 4.2:+2516771 | None:intergenic |
CATGGTTGGAGAATATCACT+TGG | 0.534034 | 4.2:+2518966 | MS.gene04727:CDS |
CTAATGCCCCTATTATCAGT+TGG | 0.535385 | 4.2:-2519217 | None:intergenic |
GGTAGAATCTTCCTTGGTGG+AGG | 0.537027 | 4.2:+2518506 | MS.gene04727:CDS |
TAGATCCAAACCCTAAACTC+TGG | 0.538113 | 4.2:-2519304 | None:intergenic |
ACTGACAAAATTCATCCTCA+TGG | 0.539915 | 4.2:+2518948 | MS.gene04727:CDS |
GGAAGATCTTGGGGTCCCCT+AGG | 0.539986 | 4.2:+2519893 | MS.gene04727:CDS |
AAGAGCAAGGAAAATCAAAC+GGG | 0.545513 | 4.2:+2520203 | MS.gene04727:CDS |
GAAGGAACAGATCAAGAGCA+AGG | 0.556375 | 4.2:+2520190 | MS.gene04727:CDS |
ACAGCCTTGTGGAGCAAGGA+AGG | 0.568344 | 4.2:+2519051 | MS.gene04727:CDS |
GGATGAAGCAAGAAAAGTGT+TGG | 0.575255 | 4.2:+2519076 | MS.gene04727:CDS |
ATGGCTCCAGCTAGCAGCCG+AGG | 0.588610 | 4.2:+2518855 | MS.gene04727:CDS |
CCTAAACTCTGGAAGATGAC+AGG | 0.589942 | 4.2:-2519293 | None:intergenic |
TGTGCAGATTATTACTGCTG+TGG | 0.591340 | 4.2:+2519778 | MS.gene04727:intron |
CCAACCTTCCTTGCTCCACA+AGG | 0.595577 | 4.2:-2519055 | None:intergenic |
TCCTACCTAACAAGAAACAA+GGG | 0.599269 | 4.2:+2518392 | MS.gene04727:CDS |
ACAGTTGGTTAACTGCTCCT+CGG | 0.608281 | 4.2:-2518872 | None:intergenic |
TTGGCATATGGAAGATCTTG+GGG | 0.609956 | 4.2:+2519884 | MS.gene04727:CDS |
AATGCCCCTATTATCAGTTG+GGG | 0.611153 | 4.2:-2519215 | None:intergenic |
CCTAACAGCCTTGTGGAGCA+AGG | 0.611408 | 4.2:+2519047 | MS.gene04727:CDS |
AAGAAACAATTGTGCAACAA+GGG | 0.614322 | 4.2:-2520002 | None:intergenic |
GGTGGAGGATTGACAAATGG+AGG | 0.617868 | 4.2:+2516789 | MS.gene04727:CDS |
TTGGCGGTAGAGTTTGGACA+TGG | 0.623504 | 4.2:+2519803 | MS.gene04727:CDS |
TGGAGCAATTCTCAATGCAG+CGG | 0.626595 | 4.2:+2518457 | MS.gene04727:CDS |
ACCAAGAGCTCCAACAACAC+AGG | 0.638231 | 4.2:-2516868 | None:intergenic |
TTCCTACCTAACAAGAAACA+AGG | 0.642991 | 4.2:+2518391 | MS.gene04727:CDS |
AAAGAAACAATTGTGCAACA+AGG | 0.645389 | 4.2:-2520003 | None:intergenic |
TTGAAATGACAGTAGCAACA+AGG | 0.647746 | 4.2:-2519367 | None:intergenic |
AGCCATTTCAGATAGATACA+GGG | 0.651100 | 4.2:-2518838 | None:intergenic |
CAAAGCCAATGCCTCCACCA+AGG | 0.665985 | 4.2:-2518517 | None:intergenic |
GCCATTTCAGATAGATACAG+GGG | 0.666457 | 4.2:-2518837 | None:intergenic |
GTCAGCTGCACAAAGTATCG+TGG | 0.672390 | 4.2:+2519955 | MS.gene04727:CDS |
CAGGCCCCAACTGATAATAG+GGG | 0.682767 | 4.2:+2519211 | MS.gene04727:CDS |
CCTACCTAACAAGAAACAAG+GGG | 0.689306 | 4.2:+2518393 | MS.gene04727:CDS |
AGTGATATTCTCCAACCATG+AGG | 0.712101 | 4.2:-2518963 | None:intergenic |
GGAGACACCTAACAGCCTTG+TGG | 0.728693 | 4.2:+2519040 | MS.gene04727:CDS |
ATGTTGTGAACTGAAACAGT+TGG | 0.742291 | 4.2:-2518887 | None:intergenic |
CTTGGAACCAACCATCCTAG+GGG | 0.744336 | 4.2:-2519908 | None:intergenic |
GCAGTTCTAATGCTTCTGGG+AGG | 0.747362 | 4.2:+2519005 | MS.gene04727:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACAAATAATTGTATAATTTA+AGG | + | chr4.2:2517564-2517583 | MS.gene04727:intron | 10.0% |
!! | TTAAATTATACAATTATTTG+TGG | - | chr4.2:2517565-2517584 | None:intergenic | 10.0% |
!! | AATATTATGAATGAAGTCTA+AGG | - | chr4.2:2518610-2518629 | None:intergenic | 20.0% |
!! | ACAATTAAGCTAATTAACAA+TGG | - | chr4.2:2519738-2519757 | None:intergenic | 20.0% |
!! | ATTGAATTGAATTGAATTGA+AGG | - | chr4.2:2516942-2516961 | None:intergenic | 20.0% |
!! | GTTTATATTTAGATGTCAAT+AGG | - | chr4.2:2518686-2518705 | None:intergenic | 20.0% |
!! | TAACTAATAAAACCATGTAT+TGG | + | chr4.2:2518720-2518739 | MS.gene04727:intron | 20.0% |
!! | TGGAATTTATGATTACTATT+AGG | + | chr4.2:2517706-2517725 | MS.gene04727:intron | 20.0% |
!! | TTTGTACATTAACAAAAAAG+AGG | - | chr4.2:2517430-2517449 | None:intergenic | 20.0% |
!!! | AAATGAAATTTGCACTTTTT+TGG | + | chr4.2:2517779-2517798 | MS.gene04727:intron | 20.0% |
!!! | AATGAAATTTGCACTTTTTT+GGG | + | chr4.2:2517780-2517799 | MS.gene04727:intron | 20.0% |
!!! | ATAATTTGTGAACATATAAG+TGG | - | chr4.2:2517923-2517942 | None:intergenic | 20.0% |
!!! | TAATTTGTGAACATATAAGT+GGG | - | chr4.2:2517922-2517941 | None:intergenic | 20.0% |
! | AAAACATTCAACTGTATTGA+AGG | - | chr4.2:2517173-2517192 | None:intergenic | 25.0% |
! | AAAAGAAAAAACAAGAGGAT+TGG | - | chr4.2:2517294-2517313 | None:intergenic | 25.0% |
! | AAAATCACCAGAAATTTACT+CGG | + | chr4.2:2518191-2518210 | MS.gene04727:intron | 25.0% |
! | AAAGAAAAAACAAGAGGATT+GGG | - | chr4.2:2517293-2517312 | None:intergenic | 25.0% |
! | ACTAAGTTTATTCCAATACA+TGG | - | chr4.2:2518735-2518754 | None:intergenic | 25.0% |
! | AGAAGATAAATCTCTTCAAT+TGG | - | chr4.2:2520133-2520152 | None:intergenic | 25.0% |
! | CTACAAGAGAAAAGAAAAAA+AGG | + | chr4.2:2517654-2517673 | MS.gene04727:intron | 25.0% |
! | CTATTTGAGAAAAGAGAAAA+TGG | + | chr4.2:2517686-2517705 | MS.gene04727:intron | 25.0% |
! | GAGGATATCATTAGATAATT+TGG | - | chr4.2:2517411-2517430 | None:intergenic | 25.0% |
! | GGAATAAACTTAGTTGAAAA+AGG | + | chr4.2:2518741-2518760 | MS.gene04727:intron | 25.0% |
! | TGTCAGTTAATAATGATCAA+TGG | - | chr4.2:2519654-2519673 | None:intergenic | 25.0% |
! | TGTCATTAGACACTTTAATT+TGG | - | chr4.2:2517143-2517162 | None:intergenic | 25.0% |
!! | AAAGTGCAAATTTCATTTTC+TGG | - | chr4.2:2517777-2517796 | None:intergenic | 25.0% |
!! | GTTTTCAATTTATAGTTCAG+TGG | - | chr4.2:2518654-2518673 | None:intergenic | 25.0% |
!! | TCAATACAGTTGAATGTTTT+TGG | + | chr4.2:2517173-2517192 | MS.gene04727:intron | 25.0% |
!!! | ACACTTTAATTTGGATCTTT+GGG | - | chr4.2:2517134-2517153 | None:intergenic | 25.0% |
!!! | AGTAATTTTCTTGTTTGTGT+TGG | + | chr4.2:2519865-2519884 | MS.gene04727:CDS | 25.0% |
!!! | TACTGTCATTTCAATGTTTT+TGG | + | chr4.2:2519376-2519395 | MS.gene04727:CDS | 25.0% |
AAAGAAACAATTGTGCAACA+AGG | - | chr4.2:2520006-2520025 | None:intergenic | 30.0% | |
AACATTCCAACTCTAATCAT+TGG | + | chr4.2:2518485-2518504 | MS.gene04727:CDS | 30.0% | |
AAGAAACAATTGTGCAACAA+GGG | - | chr4.2:2520005-2520024 | None:intergenic | 30.0% | |
ATTCTACCAATGATTAGAGT+TGG | - | chr4.2:2518494-2518513 | None:intergenic | 30.0% | |
CAGTATAAGGTTATTGCTTA+TGG | + | chr4.2:2518111-2518130 | MS.gene04727:intron | 30.0% | |
CCATGAAAAGAAAAAACAAG+AGG | - | chr4.2:2517299-2517318 | None:intergenic | 30.0% | |
CTTTGTATTCTTTCTATTGC+CGG | + | chr4.2:2520093-2520112 | MS.gene04727:CDS | 30.0% | |
GGTTGACTGTAAAATGAAAA+TGG | - | chr4.2:2517113-2517132 | None:intergenic | 30.0% | |
TTTCTTAGAGAAATTCTTCC+CGG | + | chr4.2:2518247-2518266 | MS.gene04727:CDS | 30.0% | |
! | AGTTATTTCCTGTTAACTGT+TGG | - | chr4.2:2519256-2519275 | None:intergenic | 30.0% |
! | ATCTTCTCTTTGAAAACCAT+TGG | + | chr4.2:2520146-2520165 | MS.gene04727:CDS | 30.0% |
! | CACATATGGTAAGAGTTTTA+TGG | + | chr4.2:2519593-2519612 | MS.gene04727:intron | 30.0% |
! | CATTTAAGGTACTTCTAAAG+AGG | + | chr4.2:2519183-2519202 | MS.gene04727:CDS | 30.0% |
! | GTAATTTTCTAATGTAGCAG+TGG | + | chr4.2:2518083-2518102 | MS.gene04727:intron | 30.0% |
! | TATTTGCTGCTATTAAGACA+TGG | - | chr4.2:2518582-2518601 | None:intergenic | 30.0% |
! | TTCTCGTCTTTTATTACCAA+TGG | + | chr4.2:2519338-2519357 | MS.gene04727:CDS | 30.0% |
! | TTTTTGTCCATTTTCAGAAC+AGG | - | chr4.2:2517615-2517634 | None:intergenic | 30.0% |
!! | CTCTTTAGAAGTACCTTAAA+TGG | - | chr4.2:2519185-2519204 | None:intergenic | 30.0% |
!! | GACACTTTAATTTGGATCTT+TGG | - | chr4.2:2517135-2517154 | None:intergenic | 30.0% |
!! | TATGGAATCTTCTTGCTTTT+TGG | + | chr4.2:2520046-2520065 | MS.gene04727:CDS | 30.0% |
!!! | ATGTTTTTGGTTGACAAGTT+TGG | + | chr4.2:2519389-2519408 | MS.gene04727:CDS | 30.0% |
!!! | CCTCTTGTTTTTTCTTTTCA+TGG | + | chr4.2:2517296-2517315 | MS.gene04727:intron | 30.0% |
!!! | TCTCTTTTTGGTTATGATCT+TGG | + | chr4.2:2516894-2516913 | MS.gene04727:CDS | 30.0% |
!!! | TCTTTGAAAACCATTGGTTT+TGG | + | chr4.2:2520152-2520171 | MS.gene04727:CDS | 30.0% |
!!! | TTTTGAAATGATATGCTGCA+TGG | + | chr4.2:2519439-2519458 | MS.gene04727:CDS | 30.0% |
AACCAATCACAGATCACATA+TGG | + | chr4.2:2519579-2519598 | MS.gene04727:intron | 35.0% | |
AAGAGCAAGGAAAATCAAAC+GGG | + | chr4.2:2520203-2520222 | MS.gene04727:CDS | 35.0% | |
AATTTACTCGGTTCTTTGTC+AGG | + | chr4.2:2518203-2518222 | MS.gene04727:intron | 35.0% | |
ACAAAATTCATCCTCATGGT+TGG | + | chr4.2:2518952-2518971 | MS.gene04727:CDS | 35.0% | |
ACAAACACTGCTTCTGTATT+TGG | + | chr4.2:2517811-2517830 | MS.gene04727:intron | 35.0% | |
ACTGACAAAATTCATCCTCA+TGG | + | chr4.2:2518948-2518967 | MS.gene04727:CDS | 35.0% | |
AGCCATTTCAGATAGATACA+GGG | - | chr4.2:2518841-2518860 | None:intergenic | 35.0% | |
AGCTCTTTCCATTAGAGATA+AGG | + | chr4.2:2519933-2519952 | MS.gene04727:CDS | 35.0% | |
ATCATTGGTAGAATCTTCCT+TGG | + | chr4.2:2518500-2518519 | MS.gene04727:CDS | 35.0% | |
ATGTTGTGAACTGAAACAGT+TGG | - | chr4.2:2518890-2518909 | None:intergenic | 35.0% | |
CAAAGAACCGAGTAAATTTC+TGG | - | chr4.2:2518201-2518220 | None:intergenic | 35.0% | |
CAAGAGCAAGGAAAATCAAA+CGG | + | chr4.2:2520202-2520221 | MS.gene04727:CDS | 35.0% | |
CAATGTTCTTCCAAAACCAA+TGG | - | chr4.2:2520165-2520184 | None:intergenic | 35.0% | |
CATGGCAAAGAACTTTCAAA+AGG | + | chr4.2:2519821-2519840 | MS.gene04727:CDS | 35.0% | |
GATGTAACCAATATCCTTTC+TGG | - | chr4.2:2517900-2517919 | None:intergenic | 35.0% | |
GCAAGAAGATTCCATATTTG+AGG | - | chr4.2:2520042-2520061 | None:intergenic | 35.0% | |
GCTTATGGCTAACTTAATTC+AGG | + | chr4.2:2518126-2518145 | MS.gene04727:intron | 35.0% | |
GTTCTTTCCAGAAAGGATAT+TGG | + | chr4.2:2517890-2517909 | MS.gene04727:intron | 35.0% | |
TAATGCCCCTATTATCAGTT+GGG | - | chr4.2:2519219-2519238 | None:intergenic | 35.0% | |
TACCATATGTGATCTGTGAT+TGG | - | chr4.2:2519584-2519603 | None:intergenic | 35.0% | |
TCACTTTGTCACCTCAAATA+TGG | + | chr4.2:2520028-2520047 | MS.gene04727:CDS | 35.0% | |
TCATTTCAAAACCAGCTTCT+AGG | - | chr4.2:2519430-2519449 | None:intergenic | 35.0% | |
TCCTAAAACAACCAGAAAAG+TGG | - | chr4.2:2517733-2517752 | None:intergenic | 35.0% | |
TCCTACCTAACAAGAAACAA+GGG | + | chr4.2:2518392-2518411 | MS.gene04727:CDS | 35.0% | |
TCTCAAAGTTCTTTCCAGAA+AGG | + | chr4.2:2517883-2517902 | MS.gene04727:intron | 35.0% | |
TGGAAATCAAGTAAGTGACA+TGG | + | chr4.2:2518538-2518557 | MS.gene04727:intron | 35.0% | |
TGGAAGAACATTGTAAGAGA+AGG | + | chr4.2:2520172-2520191 | MS.gene04727:CDS | 35.0% | |
TGGAATCTTAATTGCGAACT+TGG | + | chr4.2:2518914-2518933 | MS.gene04727:CDS | 35.0% | |
TTCCTACCTAACAAGAAACA+AGG | + | chr4.2:2518391-2518410 | MS.gene04727:CDS | 35.0% | |
TTCTGGATATGCACAAAACA+AGG | - | chr4.2:2517760-2517779 | None:intergenic | 35.0% | |
TTGAAATGACAGTAGCAACA+AGG | - | chr4.2:2519370-2519389 | None:intergenic | 35.0% | |
TTGGAGAATATCACTTGGTT+TGG | + | chr4.2:2518971-2518990 | MS.gene04727:CDS | 35.0% | |
! | GATTATTACTGCTGTGGTTT+TGG | + | chr4.2:2519784-2519803 | MS.gene04727:intron | 35.0% |
! | TACTTCTAAAGAGGAAGTAC+AGG | + | chr4.2:2519192-2519211 | MS.gene04727:CDS | 35.0% |
! | TTCTTGTTTGTGTTGGCATA+TGG | + | chr4.2:2519872-2519891 | MS.gene04727:CDS | 35.0% |
!! | AAAGTGTTGGAGAAAGTTAG+AGG | + | chr4.2:2519089-2519108 | MS.gene04727:CDS | 35.0% |
!! | AACTGATAATAGGGGCATTA+GGG | + | chr4.2:2519219-2519238 | MS.gene04727:CDS | 35.0% |
!! | ATGTAAAAAGTGTCAGCACT+TGG | - | chr4.2:2518331-2518350 | None:intergenic | 35.0% |
!! | ATTGGAACTTGCTTTGTTTC+CGG | - | chr4.2:2520115-2520134 | None:intergenic | 35.0% |
!! | TACTATTAGGTCCACTTTTC+TGG | + | chr4.2:2517719-2517738 | MS.gene04727:intron | 35.0% |
!! | TTCATGACCTGTTCTGAAAA+TGG | + | chr4.2:2517605-2517624 | MS.gene04727:intron | 35.0% |
!!! | TCCACTTTTCTGGTTGTTTT+AGG | + | chr4.2:2517729-2517748 | MS.gene04727:intron | 35.0% |
AACAAGAAACAAGGGGAGAA+AGG | + | chr4.2:2518400-2518419 | MS.gene04727:CDS | 40.0% | |
AAGAGCTCCTACTATGATAG+TGG | - | chr4.2:2518426-2518445 | None:intergenic | 40.0% | |
AAGCTCATGAGTCTTGACAT+GGG | - | chr4.2:2518014-2518033 | None:intergenic | 40.0% | |
AATGCCCCTATTATCAGTTG+GGG | - | chr4.2:2519218-2519237 | None:intergenic | 40.0% | |
AGAAAGGCCACTATCATAGT+AGG | + | chr4.2:2518416-2518435 | MS.gene04727:CDS | 40.0% | |
AGAAAGTTCTTCCTAGAAGC+TGG | + | chr4.2:2519416-2519435 | MS.gene04727:CDS | 40.0% | |
AGCTGTGAAGAGTCCATTTA+AGG | + | chr4.2:2519169-2519188 | MS.gene04727:CDS | 40.0% | |
AGTGATATTCTCCAACCATG+AGG | - | chr4.2:2518966-2518985 | None:intergenic | 40.0% | |
ATTGGTAGAATCTTCCTTGG+TGG | + | chr4.2:2518503-2518522 | MS.gene04727:CDS | 40.0% | |
CAATGAGTTTGCCAGAATCA+CGG | + | chr4.2:2517199-2517218 | MS.gene04727:intron | 40.0% | |
CATGGTTGGAGAATATCACT+TGG | + | chr4.2:2518966-2518985 | MS.gene04727:CDS | 40.0% | |
CCTACCTAACAAGAAACAAG+GGG | + | chr4.2:2518393-2518412 | MS.gene04727:CDS | 40.0% | |
CTAATGCCCCTATTATCAGT+TGG | - | chr4.2:2519220-2519239 | None:intergenic | 40.0% | |
CTGTCATCTTCCAGAGTTTA+GGG | + | chr4.2:2519294-2519313 | MS.gene04727:CDS | 40.0% | |
GAGCCATTTCAGATAGATAC+AGG | - | chr4.2:2518842-2518861 | None:intergenic | 40.0% | |
GCCATTTCAGATAGATACAG+GGG | - | chr4.2:2518840-2518859 | None:intergenic | 40.0% | |
GTTGGCATATGGAAGATCTT+GGG | + | chr4.2:2519883-2519902 | MS.gene04727:CDS | 40.0% | |
TAAGCTCATGAGTCTTGACA+TGG | - | chr4.2:2518015-2518034 | None:intergenic | 40.0% | |
TAGATCCAAACCCTAAACTC+TGG | - | chr4.2:2519307-2519326 | None:intergenic | 40.0% | |
TCCCCTGTATCTATCTGAAA+TGG | + | chr4.2:2518836-2518855 | MS.gene04727:CDS | 40.0% | |
TCTAATGGAAAGAGCTCACT+TGG | - | chr4.2:2519929-2519948 | None:intergenic | 40.0% | |
TGAGTTTGCCAAAATCACAG+TGG | - | chr4.2:2517229-2517248 | None:intergenic | 40.0% | |
TGTGCAGATTATTACTGCTG+TGG | + | chr4.2:2519778-2519797 | MS.gene04727:intron | 40.0% | |
TGTTGGCATATGGAAGATCT+TGG | + | chr4.2:2519882-2519901 | MS.gene04727:CDS | 40.0% | |
TTGGCATATGGAAGATCTTG+GGG | + | chr4.2:2519884-2519903 | MS.gene04727:CDS | 40.0% | |
TTTCAGTTCACAACATGTGC+TGG | + | chr4.2:2518894-2518913 | MS.gene04727:CDS | 40.0% | |
TTTGCCTTTACCTGTGTTGT+TGG | + | chr4.2:2516858-2516877 | MS.gene04727:CDS | 40.0% | |
! | AGCAGTGGACTTACAGTATA+AGG | + | chr4.2:2518098-2518117 | MS.gene04727:intron | 40.0% |
! | ATCTTCCAGAGTTTAGGGTT+TGG | + | chr4.2:2519299-2519318 | MS.gene04727:CDS | 40.0% |
! | GGAGCTCTTAGCTTTCTTAT+TGG | + | chr4.2:2518437-2518456 | MS.gene04727:CDS | 40.0% |
! | GGATGAAGCAAGAAAAGTGT+TGG | + | chr4.2:2519076-2519095 | MS.gene04727:CDS | 40.0% |
! | TTCTCCCCTTGTTTCTTGTT+AGG | - | chr4.2:2518400-2518419 | None:intergenic | 40.0% |
!! | AGAATATCACTTGGTTTGGC+AGG | + | chr4.2:2518975-2518994 | MS.gene04727:CDS | 40.0% |
!! | CAACTGATAATAGGGGCATT+AGG | + | chr4.2:2519218-2519237 | MS.gene04727:CDS | 40.0% |
!! | GGTTATGATCTTGGTGTTTC+AGG | + | chr4.2:2516903-2516922 | MS.gene04727:CDS | 40.0% |
!!! | GGAATCTTCTTGCTTTTTGG+AGG | + | chr4.2:2520049-2520068 | MS.gene04727:CDS | 40.0% |
!!! | TATTACTGCTGTGGTTTTGG+CGG | + | chr4.2:2519787-2519806 | MS.gene04727:CDS | 40.0% |
!!! | TCTGGGAGGTATTTTTTGTG+CGG | + | chr4.2:2519019-2519038 | MS.gene04727:CDS | 40.0% |
ACAGCCTGCACAATTAGACA+AGG | - | chr4.2:2518816-2518835 | None:intergenic | 45.0% | |
ACAGGCCCCAACTGATAATA+GGG | + | chr4.2:2519210-2519229 | MS.gene04727:CDS | 45.0% | |
ACAGTTGGTTAACTGCTCCT+CGG | - | chr4.2:2518875-2518894 | None:intergenic | 45.0% | |
ACTTGGAACCAACCATCCTA+GGG | - | chr4.2:2519912-2519931 | None:intergenic | 45.0% | |
AGCTCCAACAACACAGGTAA+AGG | - | chr4.2:2516865-2516884 | None:intergenic | 45.0% | |
CAGCCTGCACAATTAGACAA+GGG | - | chr4.2:2518815-2518834 | None:intergenic | 45.0% | |
CCAGCATTCCAACAGTTAAC+AGG | + | chr4.2:2519245-2519264 | MS.gene04727:CDS | 45.0% | |
CCTGTCATCTTCCAGAGTTT+AGG | + | chr4.2:2519293-2519312 | MS.gene04727:CDS | 45.0% | |
CCTGTTAACTGTTGGAATGC+TGG | - | chr4.2:2519248-2519267 | None:intergenic | 45.0% | |
GAAGGAACAGATCAAGAGCA+AGG | + | chr4.2:2520190-2520209 | MS.gene04727:CDS | 45.0% | |
GACAGGTGCATAGAAGAGAA+TGG | - | chr4.2:2519279-2519298 | None:intergenic | 45.0% | |
GCAGCTGACCTTATCTCTAA+TGG | - | chr4.2:2519944-2519963 | None:intergenic | 45.0% | |
GTTCCCTTGTCTAATTGTGC+AGG | + | chr4.2:2518809-2518828 | MS.gene04727:intron | 45.0% | |
TACAGGCCCCAACTGATAAT+AGG | + | chr4.2:2519209-2519228 | MS.gene04727:CDS | 45.0% | |
TACTCGGTTCTTTGTCAGGT+GGG | + | chr4.2:2518207-2518226 | MS.gene04727:intron | 45.0% | |
TGCTTCTTTCTGTACACGTC+CGG | - | chr4.2:2518269-2518288 | None:intergenic | 45.0% | |
TGGAGCAATTCTCAATGCAG+CGG | + | chr4.2:2518457-2518476 | MS.gene04727:CDS | 45.0% | |
TTACTCGGTTCTTTGTCAGG+TGG | + | chr4.2:2518206-2518225 | MS.gene04727:intron | 45.0% | |
! | CCAGCAGTTCTAATGCTTCT+GGG | + | chr4.2:2519002-2519021 | MS.gene04727:CDS | 45.0% |
! | CCCCTTGTTTCTTGTTAGGT+AGG | - | chr4.2:2518396-2518415 | None:intergenic | 45.0% |
! | CCTAAACTCTGGAAGATGAC+AGG | - | chr4.2:2519296-2519315 | None:intergenic | 45.0% |
! | TAGAGATGAGCTCTTTTGCC+TGG | - | chr4.2:2516816-2516835 | None:intergenic | 45.0% |
! | TCCAGCAGTTCTAATGCTTC+TGG | + | chr4.2:2519001-2519020 | MS.gene04727:CDS | 45.0% |
!! | GCTCTTGGTGGTTCTCTTTT+TGG | + | chr4.2:2516882-2516901 | MS.gene04727:CDS | 45.0% |
!! | TATATATATATATATATTCA+AGG | + | chr4.2:2517025-2517044 | MS.gene04727:intron | 5.0% |
ACCAAGAGCTCCAACAACAC+AGG | - | chr4.2:2516871-2516890 | None:intergenic | 50.0% | |
ACTCGGTTCTTTGTCAGGTG+GGG | + | chr4.2:2518208-2518227 | MS.gene04727:intron | 50.0% | |
AGCAACAAGGAGAGCTCCAT+TGG | - | chr4.2:2519357-2519376 | None:intergenic | 50.0% | |
CACTTGGAACCAACCATCCT+AGG | - | chr4.2:2519913-2519932 | None:intergenic | 50.0% | |
CAGGCCCCAACTGATAATAG+GGG | + | chr4.2:2519211-2519230 | MS.gene04727:CDS | 50.0% | |
CTTGGAACCAACCATCCTAG+GGG | - | chr4.2:2519911-2519930 | None:intergenic | 50.0% | |
GCTGGTGGAGGATTGACAAA+TGG | + | chr4.2:2516786-2516805 | MS.gene04727:CDS | 50.0% | |
GCTTCTTTCTGTACACGTCC+GGG | - | chr4.2:2518268-2518287 | None:intergenic | 50.0% | |
GGATTGACAAATGGAGGTCC+AGG | + | chr4.2:2516795-2516814 | MS.gene04727:CDS | 50.0% | |
GGTAGAATCTTCCTTGGTGG+AGG | + | chr4.2:2518506-2518525 | MS.gene04727:CDS | 50.0% | |
GGTGGAGGATTGACAAATGG+AGG | + | chr4.2:2516789-2516808 | MS.gene04727:CDS | 50.0% | |
TGTAGTACGTCTGCAGCACT+TGG | - | chr4.2:2517639-2517658 | None:intergenic | 50.0% | |
TTGGCGGTAGAGTTTGGACA+TGG | + | chr4.2:2519803-2519822 | MS.gene04727:CDS | 50.0% | |
! | ACCTGTGTTGTTGGAGCTCT+TGG | + | chr4.2:2516867-2516886 | MS.gene04727:CDS | 50.0% |
! | ACGGTGAGCCACTGTGATTT+TGG | + | chr4.2:2517218-2517237 | MS.gene04727:intron | 50.0% |
! | ATCTTCCTTGGTGGAGGCAT+TGG | + | chr4.2:2518512-2518531 | MS.gene04727:CDS | 50.0% |
! | GCAGTTCTAATGCTTCTGGG+AGG | + | chr4.2:2519005-2519024 | MS.gene04727:CDS | 50.0% |
! | TGTGTTGTTGGAGCTCTTGG+TGG | + | chr4.2:2516870-2516889 | MS.gene04727:CDS | 50.0% |
!! | CCCAGAAGCATTAGAACTGC+TGG | - | chr4.2:2519005-2519024 | None:intergenic | 50.0% |
!! | GTCAGCTGCACAAAGTATCG+TGG | + | chr4.2:2519955-2519974 | MS.gene04727:CDS | 50.0% |
!!! | GTGGTTTTGGCGGTAGAGTT+TGG | + | chr4.2:2519797-2519816 | MS.gene04727:CDS | 50.0% |
ACAGTGGCTCACCGTGATTC+TGG | - | chr4.2:2517213-2517232 | None:intergenic | 55.0% | |
CAAAGCCAATGCCTCCACCA+AGG | - | chr4.2:2518520-2518539 | None:intergenic | 55.0% | |
CCAACCTTCCTTGCTCCACA+AGG | - | chr4.2:2519058-2519077 | None:intergenic | 55.0% | |
CCTTGCTCCACAAGGCTGTT+AGG | - | chr4.2:2519050-2519069 | None:intergenic | 55.0% | |
CCTTGTGGAGCAAGGAAGGT+TGG | + | chr4.2:2519055-2519074 | MS.gene04727:CDS | 55.0% | |
GGAGACACCTAACAGCCTTG+TGG | + | chr4.2:2519040-2519059 | MS.gene04727:CDS | 55.0% | |
GTCAGGTGGGGTGACTTCAA+TGG | + | chr4.2:2518220-2518239 | MS.gene04727:intron | 55.0% | |
! | ACAGCCTTGTGGAGCAAGGA+AGG | + | chr4.2:2519051-2519070 | MS.gene04727:CDS | 55.0% |
! | CCTAACAGCCTTGTGGAGCA+AGG | + | chr4.2:2519047-2519066 | MS.gene04727:CDS | 55.0% |
!! | CTTGGTGGAGGCATTGGCTT+TGG | + | chr4.2:2518518-2518537 | MS.gene04727:CDS | 55.0% |
GATCTTGGGGTCCCCTAGGA+TGG | + | chr4.2:2519897-2519916 | MS.gene04727:CDS | 60.0% | |
GGAAGATCTTGGGGTCCCCT+AGG | + | chr4.2:2519893-2519912 | MS.gene04727:CDS | 60.0% | |
TTGGGGTCCCCTAGGATGGT+TGG | + | chr4.2:2519901-2519920 | MS.gene04727:CDS | 60.0% | |
ACTGCTCCTCGGCTGCTAGC+TGG | - | chr4.2:2518864-2518883 | None:intergenic | 65.0% | |
ATGGCTCCAGCTAGCAGCCG+AGG | + | chr4.2:2518855-2518874 | MS.gene04727:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 2516783 | 2520243 | 2516783 | ID=MS.gene04727 |
chr4.2 | mRNA | 2516783 | 2520243 | 2516783 | ID=MS.gene04727.t1;Parent=MS.gene04727 |
chr4.2 | exon | 2516783 | 2516924 | 2516783 | ID=MS.gene04727.t1.exon1;Parent=MS.gene04727.t1 |
chr4.2 | CDS | 2516783 | 2516924 | 2516783 | ID=cds.MS.gene04727.t1;Parent=MS.gene04727.t1 |
chr4.2 | exon | 2518225 | 2518547 | 2518225 | ID=MS.gene04727.t1.exon2;Parent=MS.gene04727.t1 |
chr4.2 | CDS | 2518225 | 2518547 | 2518225 | ID=cds.MS.gene04727.t1;Parent=MS.gene04727.t1 |
chr4.2 | exon | 2518831 | 2519460 | 2518831 | ID=MS.gene04727.t1.exon3;Parent=MS.gene04727.t1 |
chr4.2 | CDS | 2518831 | 2519460 | 2518831 | ID=cds.MS.gene04727.t1;Parent=MS.gene04727.t1 |
chr4.2 | exon | 2519785 | 2520243 | 2519785 | ID=MS.gene04727.t1.exon4;Parent=MS.gene04727.t1 |
chr4.2 | CDS | 2519785 | 2520243 | 2519785 | ID=cds.MS.gene04727.t1;Parent=MS.gene04727.t1 |
Gene Sequence |
Protein sequence |