Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047773.t1 | XP_003611986.1 | 99.4 | 626 | 4 | 0 | 1 | 626 | 1 | 626 | 0.00E+00 | 1270.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047773.t1 | O82663 | 88.8 | 634 | 63 | 2 | 1 | 626 | 1 | 634 | 0.0e+00 | 1160.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047773.t1 | G7KDJ3 | 99.4 | 626 | 4 | 0 | 1 | 626 | 1 | 626 | 0.0e+00 | 1270.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene73119 | MS.gene047773 | PPI |
| MS.gene047773 | MS.gene91547 | PPI |
| MS.gene035805 | MS.gene047773 | PPI |
| MS.gene005189 | MS.gene047773 | PPI |
| MS.gene026963 | MS.gene047773 | PPI |
| MS.gene064542 | MS.gene047773 | PPI |
| MS.gene047773 | MS.gene52620 | PPI |
| MS.gene44056 | MS.gene047773 | PPI |
| MS.gene34192 | MS.gene047773 | PPI |
| MS.gene047773 | MS.gene82919 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047773.t1 | MTR_5g020050 | 99.361 | 626 | 4 | 0 | 1 | 626 | 1 | 626 | 0.0 | 1303 |
| MS.gene047773.t1 | MTR_5g020050 | 99.325 | 593 | 4 | 0 | 1 | 593 | 1 | 593 | 0.0 | 1230 |
| MS.gene047773.t1 | MTR_5g020050 | 99.437 | 533 | 3 | 0 | 94 | 626 | 1 | 533 | 0.0 | 1114 |
| MS.gene047773.t1 | MTR_6g007070 | 33.498 | 606 | 325 | 19 | 13 | 588 | 62 | 619 | 6.76e-80 | 265 |
| MS.gene047773.t1 | MTR_6g007070 | 33.333 | 480 | 251 | 16 | 137 | 586 | 2 | 442 | 1.46e-59 | 206 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047773.t1 | AT5G66760 | 88.801 | 634 | 63 | 2 | 1 | 626 | 1 | 634 | 0.0 | 1156 |
| MS.gene047773.t1 | AT2G18450 | 85.849 | 636 | 76 | 3 | 1 | 626 | 1 | 632 | 0.0 | 1118 |
| MS.gene047773.t1 | AT5G14760 | 34.087 | 575 | 309 | 16 | 42 | 586 | 85 | 619 | 5.97e-80 | 266 |
Find 164 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGCTGCTTCAACAATTT+TGG | 0.104747 | 5.1:+11613701 | MS.gene047773:CDS |
| TGTTCCATCCTCCATGTTTA+AGG | 0.174508 | 5.1:-11613667 | None:intergenic |
| ATCTGGATTGTCTCCTTTAA+TGG | 0.217386 | 5.1:-11615744 | None:intergenic |
| ATTACCAACCTTCTGTTATA+AGG | 0.224565 | 5.1:-11614059 | None:intergenic |
| CCATCCTCTGTTCGAGAAAA+AGG | 0.225683 | 5.1:-11613170 | None:intergenic |
| ATGCAGGTGGTTACCATTAA+AGG | 0.242612 | 5.1:+11615731 | MS.gene047773:intron |
| ATGAGATCCGAGAGAGTTAT+TGG | 0.255836 | 5.1:-11610945 | None:intergenic |
| GCGCTTCCCTACACATATAT+TGG | 0.259082 | 5.1:-11613112 | None:intergenic |
| GTTATTGAACTAGAGAATTA+TGG | 0.259298 | 5.1:+11613143 | MS.gene047773:CDS |
| GCTTTATTGCACACTCTCTA+TGG | 0.278962 | 5.1:+11613372 | MS.gene047773:CDS |
| AGTCTCTCCTTGAGCACATC+TGG | 0.288142 | 5.1:-11614884 | None:intergenic |
| TTTCACCCAACGGGTATATA+TGG | 0.289741 | 5.1:+11614027 | MS.gene047773:CDS |
| AATGCCATGGCTGCCCGTGC+TGG | 0.295116 | 5.1:+11613876 | MS.gene047773:CDS |
| ACTTGGTGCAAATTCACTTT+TGG | 0.296486 | 5.1:+11615832 | MS.gene047773:CDS |
| TCTAGTTCAATAACCGCTTT+TGG | 0.319863 | 5.1:-11613134 | None:intergenic |
| AGAAGGTCCGATTGGATTAC+AGG | 0.320125 | 5.1:+11618773 | MS.gene047773:CDS |
| GCATGCGCTGCTGATCGAAC+TGG | 0.320191 | 5.1:+11613345 | MS.gene047773:CDS |
| TTGAAGACAGAAGTTTAATA+TGG | 0.335288 | 5.1:+11616309 | MS.gene047773:CDS |
| GTGCTCAAGGAGAGACTTCC+TGG | 0.346533 | 5.1:+11614890 | MS.gene047773:CDS |
| GTTCCTGGATTGATGGCTGC+TGG | 0.366625 | 5.1:+11615773 | MS.gene047773:CDS |
| TTTATCCTGCACCAGGGTTA+TGG | 0.371823 | 5.1:+11613804 | MS.gene047773:intron |
| TAATGCACAGTTGGCAAAAC+AGG | 0.377034 | 5.1:-11614968 | None:intergenic |
| GTCTCTCCTTGAGCACATCT+GGG | 0.382428 | 5.1:-11614883 | None:intergenic |
| TGTATTAATTTGCAGATTCT+GGG | 0.383094 | 5.1:+11618744 | MS.gene047773:intron |
| TACCTACACCACGTCCTTCC+CGG | 0.386312 | 5.1:-11614286 | None:intergenic |
| ACTATTCATTAACAGATCTA+AGG | 0.388095 | 5.1:-11613439 | None:intergenic |
| GTTGTAGGTGCTGGTGGTGC+TGG | 0.392383 | 5.1:+11611129 | MS.gene047773:CDS |
| AGAATATATCAGCGTGCATT+TGG | 0.396512 | 5.1:+11613194 | MS.gene047773:CDS |
| ACAGTTGGCAAAACAGGAAT+TGG | 0.399634 | 5.1:-11614962 | None:intergenic |
| TGCATTAGTTCCTGGATTGA+TGG | 0.400952 | 5.1:+11615766 | MS.gene047773:CDS |
| AATCCAGATGCATTAGTTCC+TGG | 0.404630 | 5.1:+11615758 | MS.gene047773:CDS |
| GACAAATTGAGAAATTCTAA+TGG | 0.409995 | 5.1:+11616050 | MS.gene047773:CDS |
| CTTCTAATGTTTCTTGTGTA+CGG | 0.411591 | 5.1:-11616139 | None:intergenic |
| CCAGAAAACGATTGCATGGC+TGG | 0.413440 | 5.1:+11616028 | MS.gene047773:CDS |
| GCAGCCTGTGCATCAGTTCA+TGG | 0.419333 | 5.1:+11615800 | MS.gene047773:CDS |
| AATCCAGGAACTAATGCATC+TGG | 0.422975 | 5.1:-11615761 | None:intergenic |
| CCAAAATTGTTGAAGCAGCT+TGG | 0.423552 | 5.1:-11613701 | None:intergenic |
| AAGTGGATGAAACACACTTT+GGG | 0.427082 | 5.1:+11616648 | MS.gene047773:CDS |
| ATGGCTGCCCGTGCTGGGAT+CGG | 0.429577 | 5.1:+11613882 | MS.gene047773:CDS |
| ATGCCATGGCTGCCCGTGCT+GGG | 0.436921 | 5.1:+11613877 | MS.gene047773:CDS |
| TGTCTTCAACCTTGACATCA+TGG | 0.438871 | 5.1:-11616295 | None:intergenic |
| TAGATAGATATGATCTTTCT+CGG | 0.442190 | 5.1:-11614843 | None:intergenic |
| GGTGGTCAGAGCTTAAACTT+TGG | 0.442230 | 5.1:+11613215 | MS.gene047773:CDS |
| TTCCTGGATTGATGGCTGCT+GGG | 0.444126 | 5.1:+11615774 | MS.gene047773:CDS |
| GCTGGATTAAGAGCTGCTAT+TGG | 0.445704 | 5.1:+11611147 | MS.gene047773:CDS |
| CTCGCGGACTTCGCGTTCCA+AGG | 0.446355 | 5.1:+11610909 | MS.gene047773:CDS |
| TTCACACACTGTTGCAGCTC+AGG | 0.452239 | 5.1:+11611224 | MS.gene047773:CDS |
| GGTCGATGACTATGGAGATC+CGG | 0.453239 | 5.1:+11614267 | MS.gene047773:CDS |
| CGACCTTGACACTACATCTC+TGG | 0.455114 | 5.1:-11614249 | None:intergenic |
| TGGCCAGCATCCTTCTCTAA+AGG | 0.456421 | 5.1:-11616008 | None:intergenic |
| AACTAACCGTGAAGTCTTCA+CGG | 0.456658 | 5.1:-11616533 | None:intergenic |
| TCTATAATCTACAGGAGATC+AGG | 0.468646 | 5.1:+11613082 | MS.gene047773:intron |
| CAGAGCTTAAACTTTGGAAA+AGG | 0.469151 | 5.1:+11613221 | MS.gene047773:CDS |
| AAATATGATGCAGTTGTTGT+AGG | 0.473572 | 5.1:+11611114 | MS.gene047773:CDS |
| TATTAATACACACGAGCCTT+AGG | 0.480919 | 5.1:-11618841 | None:intergenic |
| CATGCGCTGCTGATCGAACT+GGG | 0.482084 | 5.1:+11613346 | MS.gene047773:CDS |
| GTGTGTTGTGTCTCATAGCC+TGG | 0.484319 | 5.1:-11613395 | None:intergenic |
| TCATGCCCGTGAAGACTTCA+CGG | 0.485953 | 5.1:+11616527 | MS.gene047773:CDS |
| CTTGATCGAGACTATTGAGT+TGG | 0.493856 | 5.1:+11616437 | MS.gene047773:CDS |
| CCTTTAGGTTCTCGTGGTGA+AGG | 0.497761 | 5.1:+11614155 | MS.gene047773:intron |
| AGTGTCAAGGTCGATGACTA+TGG | 0.504405 | 5.1:+11614259 | MS.gene047773:CDS |
| GTCGATGACTATGGAGATCC+GGG | 0.504765 | 5.1:+11614268 | MS.gene047773:CDS |
| GTGGTGAAGGTGGAATTCTT+AGG | 0.505148 | 5.1:+11614168 | MS.gene047773:CDS |
| TCCCCAGCAGCCATCAATCC+AGG | 0.505507 | 5.1:-11615776 | None:intergenic |
| TTGGATCTGTTAGAAGACCT+TGG | 0.505784 | 5.1:-11610926 | None:intergenic |
| GTTCATGGCGCCAACAGACT+TGG | 0.510041 | 5.1:+11615815 | MS.gene047773:CDS |
| TGTTTAAGGCAATCACTCCT+TGG | 0.510690 | 5.1:-11613653 | None:intergenic |
| GGGTGGCATAAATGCTGCAT+TGG | 0.511697 | 5.1:+11612662 | MS.gene047773:intron |
| ACCTCTCCATGATGATTTGT+GGG | 0.512051 | 5.1:-11615007 | None:intergenic |
| GAAGTGGATGAAACACACTT+TGG | 0.512688 | 5.1:+11616647 | MS.gene047773:CDS |
| TTTGTGCAATTTCACCCAAC+GGG | 0.515778 | 5.1:+11614018 | MS.gene047773:CDS |
| ATTGCACACTCTCTATGGCC+AGG | 0.517919 | 5.1:+11613377 | MS.gene047773:CDS |
| ACCTCAGCACATACATGCAC+TGG | 0.519071 | 5.1:+11613846 | MS.gene047773:CDS |
| GGTGGCATAAATGCTGCATT+GGG | 0.519373 | 5.1:+11612663 | MS.gene047773:CDS |
| TACCTCTCCATGATGATTTG+TGG | 0.520950 | 5.1:-11615008 | None:intergenic |
| CTGCTCCATATATACCCGTT+GGG | 0.522127 | 5.1:-11614032 | None:intergenic |
| CCCATGTTATAATGCACAGT+TGG | 0.530509 | 5.1:-11614977 | None:intergenic |
| CTCAAGTCCGATCCCAGCAC+GGG | 0.532597 | 5.1:-11613889 | None:intergenic |
| CAATGCACTCTGCAGAAGCT+AGG | 0.534552 | 5.1:+11616487 | MS.gene047773:CDS |
| CCGTGCTGGGATCGGACTTG+AGG | 0.534940 | 5.1:+11613890 | MS.gene047773:CDS |
| TGCAGAGTGCATTGTGACGC+AGG | 0.536303 | 5.1:-11616478 | None:intergenic |
| AACAGATCCAATAACTCTCT+CGG | 0.540385 | 5.1:+11610938 | MS.gene047773:CDS |
| GATCCCAGCACGGGCAGCCA+TGG | 0.541289 | 5.1:-11613880 | None:intergenic |
| TCCTGGATTGATGGCTGCTG+GGG | 0.543390 | 5.1:+11615775 | MS.gene047773:CDS |
| ATATATCAGCGTGCATTTGG+TGG | 0.543691 | 5.1:+11613197 | MS.gene047773:CDS |
| GTTGCAGAAATTCATAAGCC+AGG | 0.544526 | 5.1:+11615890 | MS.gene047773:CDS |
| TCCAATGTATTCAAATGCAC+AGG | 0.545981 | 5.1:-11618796 | None:intergenic |
| TGCCATCCAATATATGTGTA+GGG | 0.549829 | 5.1:+11613106 | MS.gene047773:CDS |
| ATGCCATCCAATATATGTGT+AGG | 0.552173 | 5.1:+11613105 | MS.gene047773:CDS |
| GCACAGGCCTGTAATCCAAT+CGG | 0.553394 | 5.1:-11618780 | None:intergenic |
| TGAATTTGCACCAAGTCTGT+TGG | 0.555514 | 5.1:-11615825 | None:intergenic |
| ACACAAGAAACATTAGAAGA+AGG | 0.555710 | 5.1:+11616143 | MS.gene047773:CDS |
| GAAACAACAGCCTTTAGAGA+AGG | 0.556394 | 5.1:+11615998 | MS.gene047773:CDS |
| GTCAATTAATTGATAAAACG+TGG | 0.556470 | 5.1:+11616264 | MS.gene047773:CDS |
| GAAATATGACTGAAGATGAC+TGG | 0.557787 | 5.1:+11612685 | MS.gene047773:CDS |
| GCCTGTGCATTTGAATACAT+TGG | 0.557956 | 5.1:+11618795 | MS.gene047773:CDS |
| TTTGGACCTTTAGGTTCTCG+TGG | 0.562055 | 5.1:+11614149 | MS.gene047773:intron |
| GGAGAACGAGAAGGTCCGAT+TGG | 0.562403 | 5.1:+11618765 | MS.gene047773:CDS |
| GGCATTCCCACAAATCATCA+TGG | 0.562992 | 5.1:+11615001 | MS.gene047773:CDS |
| TTAGGTTCTCGTGGTGAAGG+TGG | 0.564629 | 5.1:+11614158 | MS.gene047773:intron |
| GGCGCCATGAACTGATGCAC+AGG | 0.569624 | 5.1:-11615804 | None:intergenic |
| GGTTGAATCATTCCCACCTA+AGG | 0.569982 | 5.1:+11618825 | MS.gene047773:CDS |
| GATGCAGTTGTTGTAGGTGC+TGG | 0.570264 | 5.1:+11611120 | MS.gene047773:CDS |
| CCTGCTCCATATATACCCGT+TGG | 0.576795 | 5.1:-11614033 | None:intergenic |
| AGACAAGAGATGATGAGAAG+TGG | 0.576847 | 5.1:+11616631 | MS.gene047773:intron |
| ATGGAGATCCGGGAAGGACG+TGG | 0.577137 | 5.1:+11614278 | MS.gene047773:CDS |
| CCAACGGGTATATATGGAGC+AGG | 0.577748 | 5.1:+11614033 | MS.gene047773:CDS |
| TTTGAATACATTGGATGATG+AGG | 0.579255 | 5.1:+11618804 | MS.gene047773:CDS |
| TGCCGGTGTGGATGTTACAA+AGG | 0.579809 | 5.1:+11614937 | MS.gene047773:CDS |
| CAACAGTGTGTGAACGAGTT+GGG | 0.581861 | 5.1:-11611215 | None:intergenic |
| TAATACACACGAGCCTTAGG+TGG | 0.581923 | 5.1:-11618838 | None:intergenic |
| ATGTGGCGTTGCGTCGCTCG+CGG | 0.583417 | 5.1:+11610893 | MS.gene047773:CDS |
| GCACATACATGCACTGGAGA+TGG | 0.583607 | 5.1:+11613852 | MS.gene047773:CDS |
| GTTTGTGCAATTTCACCCAA+CGG | 0.583893 | 5.1:+11614017 | MS.gene047773:CDS |
| TTCCCTACACATATATTGGA+TGG | 0.587622 | 5.1:-11613108 | None:intergenic |
| GCAGGTTGCCTTATAACAGA+AGG | 0.587925 | 5.1:+11614051 | MS.gene047773:CDS |
| CAGCCTTTAGAGAAGGATGC+TGG | 0.588176 | 5.1:+11616005 | MS.gene047773:CDS |
| AGATAGATATGATCTTTCTC+GGG | 0.589489 | 5.1:-11614842 | None:intergenic |
| GCTATTGGACTCTCTGAACA+TGG | 0.593982 | 5.1:+11611162 | MS.gene047773:CDS |
| GGAGAGTTTCCATGATGTCA+AGG | 0.594515 | 5.1:+11616286 | MS.gene047773:CDS |
| ACACTGTCAAAGGAAGTGAT+TGG | 0.595632 | 5.1:+11612724 | MS.gene047773:CDS |
| GATGCAAGATCCTTTGCTGT+AGG | 0.601598 | 5.1:-11614227 | None:intergenic |
| CAGATTCTGGGAGAACGAGA+AGG | 0.601740 | 5.1:+11618756 | MS.gene047773:intron |
| GCCAACTGTGCATTATAACA+TGG | 0.602535 | 5.1:+11614976 | MS.gene047773:CDS |
| AGGAGTGATTGCCTTAAACA+TGG | 0.608685 | 5.1:+11613656 | MS.gene047773:CDS |
| GCAGTTGTTGTAGGTGCTGG+TGG | 0.612451 | 5.1:+11611123 | MS.gene047773:CDS |
| ACTAACCGTGAAGTCTTCAC+GGG | 0.613752 | 5.1:-11616532 | None:intergenic |
| TCAATTAATTGATAAAACGT+GGG | 0.614071 | 5.1:+11616265 | MS.gene047773:CDS |
| CACATGTACGACACTGTCAA+AGG | 0.616446 | 5.1:+11612714 | MS.gene047773:CDS |
| ATTGCCTTAAACATGGAGGA+TGG | 0.617847 | 5.1:+11613663 | MS.gene047773:CDS |
| GCAACAGTGTGTGAACGAGT+TGG | 0.618205 | 5.1:-11611216 | None:intergenic |
| GATCTGTTAATGAATAGTGA+TGG | 0.620154 | 5.1:+11613444 | MS.gene047773:CDS |
| ACGATATGCTCCTACAGCAA+AGG | 0.620667 | 5.1:+11614217 | MS.gene047773:CDS |
| ATCCGGGAAGGACGTGGTGT+AGG | 0.620698 | 5.1:+11614284 | MS.gene047773:CDS |
| TCTCTCCTTGAGCACATCTG+GGG | 0.622970 | 5.1:-11614882 | None:intergenic |
| CACTGGAGATGGCAATGCCA+TGG | 0.623010 | 5.1:+11613863 | MS.gene047773:CDS |
| TTCCTTTGTAACATCCACAC+CGG | 0.630752 | 5.1:-11614939 | None:intergenic |
| CCTCAAGTCCGATCCCAGCA+CGG | 0.631679 | 5.1:-11613890 | None:intergenic |
| TCCAGTGCATGTATGTGCTG+AGG | 0.632447 | 5.1:-11613847 | None:intergenic |
| CTGGCCAGAAAACGATTGCA+TGG | 0.633199 | 5.1:+11616024 | MS.gene047773:CDS |
| GCAGCAGTTTCAGATATACC+AGG | 0.633855 | 5.1:-11614908 | None:intergenic |
| GGAATTCTTAGGAATAGCGA+GGG | 0.637607 | 5.1:+11614179 | MS.gene047773:CDS |
| ATGACTATGGAGATCCGGGA+AGG | 0.637820 | 5.1:+11614272 | MS.gene047773:CDS |
| CTCTCCTTGAGCACATCTGG+GGG | 0.639375 | 5.1:-11614881 | None:intergenic |
| GTCAAAGGAAGTGATTGGCT+AGG | 0.646721 | 5.1:+11612729 | MS.gene047773:CDS |
| GGATGTGTAGGTAGTTGCCA+AGG | 0.653439 | 5.1:+11613636 | MS.gene047773:intron |
| CATCCAGAGATGTAGTGTCA+AGG | 0.657541 | 5.1:+11614246 | MS.gene047773:CDS |
| GAGTGAGTCTTACACCGTCG+TGG | 0.659919 | 5.1:+11611086 | MS.gene047773:intron |
| GAAGCTAGGAAAGAGAGTAG+AGG | 0.661823 | 5.1:+11616501 | MS.gene047773:CDS |
| TGGAATTCTTAGGAATAGCG+AGG | 0.663327 | 5.1:+11614178 | MS.gene047773:CDS |
| TCCCACAAATCATCATGGAG+AGG | 0.663523 | 5.1:+11615006 | MS.gene047773:CDS |
| AATACACACGAGCCTTAGGT+GGG | 0.663657 | 5.1:-11618837 | None:intergenic |
| GATCAGCAGCGCATGCACAA+CGG | 0.669979 | 5.1:-11613338 | None:intergenic |
| TGACTGAAGATGACTGGAGG+TGG | 0.670220 | 5.1:+11612691 | MS.gene047773:CDS |
| TGAACGAGTTGGGAAAAGCT+TGG | 0.674771 | 5.1:-11611205 | None:intergenic |
| CCAACTGTGCATTATAACAT+GGG | 0.676041 | 5.1:+11614977 | MS.gene047773:CDS |
| GTGTAGGGAAGCGCCAAAAG+CGG | 0.676107 | 5.1:+11613121 | MS.gene047773:CDS |
| ACTGTGCATTATAACATGGG+TGG | 0.685484 | 5.1:+11614980 | MS.gene047773:CDS |
| ATCATATTTATGATCCACGA+CGG | 0.704232 | 5.1:-11611100 | None:intergenic |
| GAATTCTTAGGAATAGCGAG+GGG | 0.709202 | 5.1:+11614180 | MS.gene047773:CDS |
| AGTGATTGCCTTAAACATGG+AGG | 0.738491 | 5.1:+11613659 | MS.gene047773:CDS |
| AGTGGATGAAACACACTTTG+GGG | 0.750579 | 5.1:+11616649 | MS.gene047773:CDS |
| AATTCTTAGGAATAGCGAGG+GGG | 0.754649 | 5.1:+11614181 | MS.gene047773:CDS |
| ATATGACTGAAGATGACTGG+AGG | 0.760494 | 5.1:+11612688 | MS.gene047773:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 11610893 | 11618861 | 11610893 | ID=MS.gene047773 |
| chr5.1 | mRNA | 11610893 | 11618861 | 11610893 | ID=MS.gene047773.t1;Parent=MS.gene047773 |
| chr5.1 | exon | 11610893 | 11610985 | 11610893 | ID=MS.gene047773.t1.exon1;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11610893 | 11610985 | 11610893 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| chr5.1 | exon | 11611087 | 11611245 | 11611087 | ID=MS.gene047773.t1.exon2;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11611087 | 11611245 | 11611087 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| chr5.1 | exon | 11612663 | 11612750 | 11612663 | ID=MS.gene047773.t1.exon3;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11612663 | 11612750 | 11612663 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| chr5.1 | exon | 11613096 | 11613242 | 11613096 | ID=MS.gene047773.t1.exon4;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11613096 | 11613242 | 11613096 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| chr5.1 | exon | 11613325 | 11613465 | 11613325 | ID=MS.gene047773.t1.exon5;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11613325 | 11613465 | 11613325 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| chr5.1 | exon | 11613646 | 11613731 | 11613646 | ID=MS.gene047773.t1.exon6;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11613646 | 11613731 | 11613646 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| chr5.1 | exon | 11613819 | 11613911 | 11613819 | ID=MS.gene047773.t1.exon7;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11613819 | 11613911 | 11613819 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| chr5.1 | exon | 11614009 | 11614072 | 11614009 | ID=MS.gene047773.t1.exon8;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11614009 | 11614072 | 11614009 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| chr5.1 | exon | 11614162 | 11614305 | 11614162 | ID=MS.gene047773.t1.exon9;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11614162 | 11614305 | 11614162 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| chr5.1 | exon | 11614840 | 11615027 | 11614840 | ID=MS.gene047773.t1.exon10;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11614840 | 11615027 | 11614840 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| chr5.1 | exon | 11615737 | 11615911 | 11615737 | ID=MS.gene047773.t1.exon11;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11615737 | 11615911 | 11615737 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| chr5.1 | exon | 11615994 | 11616164 | 11615994 | ID=MS.gene047773.t1.exon12;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11615994 | 11616164 | 11615994 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| chr5.1 | exon | 11616261 | 11616330 | 11616261 | ID=MS.gene047773.t1.exon13;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11616261 | 11616330 | 11616261 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| chr5.1 | exon | 11616428 | 11616548 | 11616428 | ID=MS.gene047773.t1.exon14;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11616428 | 11616548 | 11616428 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| chr5.1 | exon | 11616633 | 11616670 | 11616633 | ID=MS.gene047773.t1.exon15;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11616633 | 11616670 | 11616633 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| chr5.1 | exon | 11618759 | 11618861 | 11618759 | ID=MS.gene047773.t1.exon16;Parent=MS.gene047773.t1 |
| chr5.1 | CDS | 11618759 | 11618861 | 11618759 | ID=cds.MS.gene047773.t1;Parent=MS.gene047773.t1 |
| Gene Sequence |
| Protein sequence |
