Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048987.t1 | RHN43535.1 | 99.7 | 316 | 1 | 0 | 1 | 316 | 1 | 316 | 2.30E-172 | 614.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048987.t1 | O48726 | 69.2 | 299 | 90 | 2 | 4 | 301 | 2 | 299 | 1.9e-111 | 403.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048987.t1 | G7LIU7 | 99.7 | 316 | 1 | 0 | 1 | 316 | 1 | 316 | 1.7e-172 | 614.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene048987 | MS.gene058594 | PPI |
| MS.gene048987 | MS.gene57118 | PPI |
| MS.gene048987 | MS.gene62646 | PPI |
| MS.gene048987 | MS.gene015610 | PPI |
| MS.gene048987 | MS.gene95863 | PPI |
| MS.gene048987 | MS.gene74847 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048987.t1 | MTR_8g101230 | 99.684 | 316 | 1 | 0 | 1 | 316 | 1 | 316 | 0.0 | 632 |
| MS.gene048987.t1 | MTR_8g101230 | 97.785 | 316 | 1 | 1 | 1 | 316 | 1 | 310 | 0.0 | 612 |
| MS.gene048987.t1 | MTR_8g101230 | 99.636 | 275 | 1 | 0 | 1 | 275 | 1 | 275 | 0.0 | 551 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048987.t1 | AT2G26590 | 67.732 | 313 | 86 | 3 | 4 | 315 | 2 | 300 | 5.56e-147 | 416 |
| MS.gene048987.t1 | AT2G26590 | 67.732 | 313 | 86 | 3 | 4 | 315 | 2 | 300 | 5.56e-147 | 416 |
| MS.gene048987.t1 | AT2G26590 | 67.732 | 313 | 86 | 3 | 4 | 315 | 2 | 300 | 5.56e-147 | 416 |
| MS.gene048987.t1 | AT2G26590 | 66.134 | 313 | 87 | 4 | 4 | 315 | 2 | 296 | 1.02e-140 | 399 |
Find 70 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGTCACTAGAGGGAAAA+AGG | 0.228102 | 4.1:+3919436 | MS.gene048987:CDS |
| ATCTTCTGGTCCAGTTAAAT+TGG | 0.244685 | 4.1:+3923278 | MS.gene048987:CDS |
| TAACATTACCTCTGGTAAAT+AGG | 0.276133 | 4.1:-3923829 | None:intergenic |
| CAGATAGATTTGTCCCAGTT+TGG | 0.317934 | 4.1:+3924095 | MS.gene048987:CDS |
| ATGACAGAAAGTTCTTCTTC+TGG | 0.336325 | 4.1:+3921571 | MS.gene048987:CDS |
| TACTTGGATCAATTCCAAAC+TGG | 0.345350 | 4.1:-3924109 | None:intergenic |
| TGGAGATCTGCCAATTTAAC+TGG | 0.349597 | 4.1:-3923288 | None:intergenic |
| ACTAGCGATGTAACATCTTC+TGG | 0.352930 | 4.1:+3923264 | MS.gene048987:CDS |
| GAGATTATTACCTGGATTGC+AGG | 0.356564 | 4.1:-3919167 | None:intergenic |
| GGCTACTTGGATTCATCCAT+TGG | 0.381548 | 4.1:-3924672 | None:intergenic |
| TGATCTGATATTGCCATTGA+TGG | 0.395309 | 4.1:+3923776 | MS.gene048987:CDS |
| ACTAGAAACTTACATTTACT+TGG | 0.408411 | 4.1:-3924125 | None:intergenic |
| GATTAGGTTAATCAAACATC+TGG | 0.417400 | 4.1:+3921519 | MS.gene048987:intron |
| GATTACCTCAACAGACCATT+AGG | 0.418595 | 4.1:+3921746 | MS.gene048987:CDS |
| ACGAGTCCTTTGCGTGCATC+AGG | 0.422741 | 4.1:-3919465 | None:intergenic |
| GGAATCTAGGCAAGATGATC+AGG | 0.427826 | 4.1:+3924626 | MS.gene048987:CDS |
| TCTCCAAGTCTGAGGAATCT+AGG | 0.438245 | 4.1:+3924613 | MS.gene048987:CDS |
| AAGTAGCCTGCCAGGCTACT+TGG | 0.438982 | 4.1:-3924685 | None:intergenic |
| GTTGCATCCACACCAAAGTT+CGG | 0.439990 | 4.1:-3923243 | None:intergenic |
| CAATGTTGCTCAATATTCTC+TGG | 0.443937 | 4.1:-3923308 | None:intergenic |
| TTGCATCCACACCAAAGTTC+GGG | 0.455855 | 4.1:-3923242 | None:intergenic |
| TCGCTGCAGGTACTTCGAAC+AGG | 0.457627 | 4.1:+3924071 | MS.gene048987:intron |
| GCTACTTGGATTCATCCATT+GGG | 0.458064 | 4.1:-3924671 | None:intergenic |
| AAAGTTCTTCTTCTGGATGC+AGG | 0.461672 | 4.1:+3921578 | MS.gene048987:CDS |
| GCCAAGTGATTACCTTCGTC+AGG | 0.468536 | 4.1:-3923443 | None:intergenic |
| ATCAATGGCAATATCAGATC+AGG | 0.469632 | 4.1:-3923774 | None:intergenic |
| AAGGACTCGTTCGCATTGCT+AGG | 0.470556 | 4.1:+3919478 | MS.gene048987:CDS |
| TTGGTCTCCAGAAGATATAT+TGG | 0.495383 | 4.1:+3923924 | MS.gene048987:CDS |
| AACAACTCCAATATATCTTC+TGG | 0.501293 | 4.1:-3923931 | None:intergenic |
| AATGGTAACGTCTCCATCAA+TGG | 0.501612 | 4.1:-3923789 | None:intergenic |
| ATTCTATGATGTAGGGTACT+TGG | 0.504079 | 4.1:+3923905 | MS.gene048987:intron |
| TTGCCTAGATTCCTCAGACT+TGG | 0.504515 | 4.1:-3924616 | None:intergenic |
| GCTTGAAGTTTCTGAAGATA+CGG | 0.509208 | 4.1:+3923007 | MS.gene048987:CDS |
| GTTGGAAAGAGCTGCAAACT+TGG | 0.509813 | 4.1:+3923215 | MS.gene048987:intron |
| AACTTGGTTGTCCCGAACTT+TGG | 0.511711 | 4.1:+3923231 | MS.gene048987:CDS |
| TTCTCACTAACAGAGCTCCT+TGG | 0.514456 | 4.1:+3922957 | MS.gene048987:intron |
| CTATTGACAGGAAACTCTCC+TGG | 0.515048 | 4.1:+3919398 | MS.gene048987:intron |
| CAGAGAATATTGAGCAACAT+TGG | 0.515670 | 4.1:+3923309 | MS.gene048987:CDS |
| AGCAACATTGGACCTGCTGC+AGG | 0.516938 | 4.1:+3923321 | MS.gene048987:CDS |
| ATTGATGGAGACGTTACCAT+TGG | 0.528804 | 4.1:+3923791 | MS.gene048987:CDS |
| ACTTGGATCAATTCCAAACT+GGG | 0.539991 | 4.1:-3924108 | None:intergenic |
| GAAGCTAGACGCTGCTCCAA+TGG | 0.546492 | 4.1:-3923807 | None:intergenic |
| ATCTCAATCTTGTACCCCAA+TGG | 0.549644 | 4.1:+3924656 | MS.gene048987:CDS |
| GGTTAATCAAACATCTGGAA+GGG | 0.549885 | 4.1:+3921524 | MS.gene048987:intron |
| TTCAGAAACTTCAAGCGGAA+GGG | 0.552715 | 4.1:-3923000 | None:intergenic |
| TCTACTTGCTGACGGAAAGG+TGG | 0.554317 | 4.1:-3923961 | None:intergenic |
| GATTGCAGGAAAAGCGTCGA+TGG | 0.560072 | 4.1:-3919153 | None:intergenic |
| TGTAACTTATTACCTGCAGC+AGG | 0.562977 | 4.1:-3923333 | None:intergenic |
| CTACTTGCTGACGGAAAGGT+GGG | 0.563809 | 4.1:-3923960 | None:intergenic |
| GAATCTACTTGCTGACGGAA+AGG | 0.566905 | 4.1:-3923964 | None:intergenic |
| CTTCAGAAACTTCAAGCGGA+AGG | 0.572912 | 4.1:-3923001 | None:intergenic |
| TCAAGCGGAAGGGATACATC+AGG | 0.576564 | 4.1:-3922990 | None:intergenic |
| ACTCTCCTGGAGTTTCGTGC+TGG | 0.579564 | 4.1:+3919411 | MS.gene048987:CDS |
| TAAAAGAATCTACTTGCTGA+CGG | 0.580735 | 4.1:-3923969 | None:intergenic |
| AGGTTAATCAAACATCTGGA+AGG | 0.590396 | 4.1:+3921523 | MS.gene048987:intron |
| TGCTGGTAAAATGTCACTAG+AGG | 0.593216 | 4.1:+3919428 | MS.gene048987:CDS |
| ATTTAATTAGGCTTTGAACT+CGG | 0.598507 | 4.1:+3923738 | MS.gene048987:intron |
| AGGACTCGTTCGCATTGCTA+GGG | 0.600668 | 4.1:+3919479 | MS.gene048987:CDS |
| GCTGGTAAAATGTCACTAGA+GGG | 0.629870 | 4.1:+3919429 | MS.gene048987:CDS |
| GTAGTTCCTGATGCACGCAA+AGG | 0.629923 | 4.1:+3919459 | MS.gene048987:CDS |
| GGTTGTCCCGAACTTTGGTG+TGG | 0.640547 | 4.1:+3923236 | MS.gene048987:CDS |
| TTGAAGATGACATCTCATCC+AGG | 0.641031 | 4.1:+3923030 | MS.gene048987:CDS |
| TCTAGCTTCCTATTTACCAG+AGG | 0.641283 | 4.1:+3923821 | MS.gene048987:CDS |
| GGATTCTGTCTCCAAGTCTG+AGG | 0.641302 | 4.1:+3924605 | MS.gene048987:CDS |
| CTACTTGGATTCATCCATTG+GGG | 0.648704 | 4.1:-3924670 | None:intergenic |
| ACTTACCTAATGGTCTGTTG+AGG | 0.651428 | 4.1:-3921751 | None:intergenic |
| AGCATTCTTGATCCTGACGA+AGG | 0.660593 | 4.1:+3923431 | MS.gene048987:CDS |
| CATCAGGTTCTTCTTCACCA+AGG | 0.686746 | 4.1:-3922974 | None:intergenic |
| GTATCTTCAGAAACTTCAAG+CGG | 0.690380 | 4.1:-3923005 | None:intergenic |
| TCAGATAATATTTCCGAACG+AGG | 0.696593 | 4.1:+3921404 | MS.gene048987:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATAAACAAAAAATGA+AGG | + | chr4.1:3924453-3924472 | MS.gene048987:intron | 10.0% |
| !! | ATTAGTAAATGAAATTTATA+GGG | + | chr4.1:3920177-3920196 | MS.gene048987:intron | 10.0% |
| !! | TATTAGTAAATGAAATTTAT+AGG | + | chr4.1:3920176-3920195 | MS.gene048987:intron | 10.0% |
| !! | TATTTACAAGATTATAAATA+AGG | + | chr4.1:3921949-3921968 | MS.gene048987:intron | 10.0% |
| !! | TTATAAAAAATATTAGCAAA+AGG | + | chr4.1:3923685-3923704 | MS.gene048987:intron | 10.0% |
| !! | AACAGCAATTATATATATTT+GGG | - | chr4.1:3919740-3919759 | None:intergenic | 15.0% |
| !! | ATCAAAATCAATAACAATTA+AGG | - | chr4.1:3924173-3924192 | None:intergenic | 15.0% |
| !! | ATGAAATGTAAAAAAGAAAA+AGG | - | chr4.1:3924019-3924038 | None:intergenic | 15.0% |
| !! | ATTTCATTTCAAAAGATATT+CGG | + | chr4.1:3924032-3924051 | MS.gene048987:intron | 15.0% |
| !! | CTAAAAAAAAAAAATTGACA+TGG | - | chr4.1:3922125-3922144 | None:intergenic | 15.0% |
| !! | TGAAATGTAAAAAAGAAAAA+GGG | - | chr4.1:3924018-3924037 | None:intergenic | 15.0% |
| !! | TTAGTAAATGAAATTTATAG+GGG | + | chr4.1:3920178-3920197 | MS.gene048987:intron | 15.0% |
| !!! | ATTTGAGACAAAAAATTAAT+CGG | - | chr4.1:3919881-3919900 | None:intergenic | 15.0% |
| !!! | CATGTCAATTTTTTTTTTTT+AGG | + | chr4.1:3922123-3922142 | MS.gene048987:intron | 15.0% |
| !!! | TTGTACATAATTTATTTTCA+TGG | + | chr4.1:3922494-3922513 | MS.gene048987:intron | 15.0% |
| !! | AAAATCAATAACAATTAAGG+TGG | - | chr4.1:3924170-3924189 | None:intergenic | 20.0% |
| !! | AGATCTAAAGATTTATAAGT+TGG | + | chr4.1:3921137-3921156 | MS.gene048987:intron | 20.0% |
| !! | ATGAATCAAAACCAAATAAA+AGG | - | chr4.1:3922830-3922849 | None:intergenic | 20.0% |
| !! | CATATCATCAAAAAAGTAAT+AGG | - | chr4.1:3923406-3923425 | None:intergenic | 20.0% |
| !! | CTATGAAAAATAAACACTAA+AGG | - | chr4.1:3920212-3920231 | None:intergenic | 20.0% |
| !! | CTTATTTATAAAGATAACGT+GGG | + | chr4.1:3920316-3920335 | MS.gene048987:intron | 20.0% |
| !! | GAACAGCAATTATATATATT+TGG | - | chr4.1:3919741-3919760 | None:intergenic | 20.0% |
| !! | TATATATTTGGGAAGAAAAA+AGG | - | chr4.1:3919729-3919748 | None:intergenic | 20.0% |
| !! | TTCGTTAAAAAATGCATATT+AGG | + | chr4.1:3922731-3922750 | MS.gene048987:intron | 20.0% |
| !!! | AAAGTATTTCCATTTGATTA+TGG | + | chr4.1:3922616-3922635 | MS.gene048987:intron | 20.0% |
| !!! | AGATTCTTTTACTTATGTAA+AGG | + | chr4.1:3923981-3924000 | MS.gene048987:intron | 20.0% |
| !!! | ATTTATTCACATTTTCCATT+TGG | + | chr4.1:3924272-3924291 | MS.gene048987:intron | 20.0% |
| !!! | CTAAAAGTTTGTTTTTTTGT+TGG | + | chr4.1:3923197-3923216 | MS.gene048987:intron | 20.0% |
| !!! | TTATAAGTTGGATAGAAATA+TGG | + | chr4.1:3921149-3921168 | MS.gene048987:intron | 20.0% |
| !!! | TTTGGATATTCAAATGTTTT+CGG | + | chr4.1:3923060-3923079 | MS.gene048987:intron | 20.0% |
| !!! | TTTTTTATGCTATGATTGAT+CGG | + | chr4.1:3919365-3919384 | MS.gene048987:intron | 20.0% |
| ! | AACTTAGTACAACTTAGTAT+TGG | + | chr4.1:3922206-3922225 | MS.gene048987:intron | 25.0% |
| ! | AAGATAAAGAGATTATTACC+TGG | - | chr4.1:3919178-3919197 | None:intergenic | 25.0% |
| ! | AATGTAAAAAAGAAAAAGGG+AGG | - | chr4.1:3924015-3924034 | None:intergenic | 25.0% |
| ! | ACCAAAGAAAACTACTATAT+GGG | - | chr4.1:3919919-3919938 | None:intergenic | 25.0% |
| ! | ACTAGAAACTTACATTTACT+TGG | - | chr4.1:3924128-3924147 | None:intergenic | 25.0% |
| ! | ACTTAGTACAACTTAGTATT+GGG | + | chr4.1:3922207-3922226 | MS.gene048987:intron | 25.0% |
| ! | AGCATCAAAATAAATACAGA+AGG | - | chr4.1:3921361-3921380 | None:intergenic | 25.0% |
| ! | AGCTTAATAGCTAACAAATA+TGG | + | chr4.1:3920535-3920554 | MS.gene048987:intron | 25.0% |
| ! | AGGATTATAAATGACAACAT+TGG | + | chr4.1:3921030-3921049 | MS.gene048987:intron | 25.0% |
| ! | ATCATCAAGTCAAAATACTT+AGG | - | chr4.1:3921635-3921654 | None:intergenic | 25.0% |
| ! | ATGGAAAATGTGAATAAATG+TGG | - | chr4.1:3924271-3924290 | None:intergenic | 25.0% |
| ! | ATGTAAAAAAGAAAAAGGGA+GGG | - | chr4.1:3924014-3924033 | None:intergenic | 25.0% |
| ! | ATGTAGTATTCTATGATGTA+GGG | + | chr4.1:3923898-3923917 | MS.gene048987:intron | 25.0% |
| ! | CCACGTTATCTTTATAAATA+AGG | - | chr4.1:3920318-3920337 | None:intergenic | 25.0% |
| ! | CGTAACCATACTAATATATT+TGG | - | chr4.1:3922763-3922782 | None:intergenic | 25.0% |
| ! | GAAAGCCAAATATATTAGTA+TGG | + | chr4.1:3922755-3922774 | MS.gene048987:intron | 25.0% |
| ! | GGAACAACTAATATTTCAAT+TGG | - | chr4.1:3921340-3921359 | None:intergenic | 25.0% |
| ! | TAGAATTTGTATAGAATAGC+TGG | + | chr4.1:3919854-3919873 | MS.gene048987:intron | 25.0% |
| ! | TAGATTCCTATACACAATAA+AGG | - | chr4.1:3921688-3921707 | None:intergenic | 25.0% |
| ! | TATCTATTTATTTACCTGAC+TGG | + | chr4.1:3923171-3923190 | MS.gene048987:intron | 25.0% |
| ! | TCATCAAGTCAAAATACTTA+GGG | - | chr4.1:3921634-3921653 | None:intergenic | 25.0% |
| ! | TGCTTTACTCTTAATATCTT+GGG | + | chr4.1:3921448-3921467 | MS.gene048987:intron | 25.0% |
| ! | TGGAAAATGTGAATAAATGT+GGG | - | chr4.1:3924270-3924289 | None:intergenic | 25.0% |
| ! | TTAATTAATGCAAAGAAGCT+AGG | + | chr4.1:3922097-3922116 | MS.gene048987:intron | 25.0% |
| ! | TTACACGGTTTAAATATCTT+GGG | + | chr4.1:3920749-3920768 | MS.gene048987:intron | 25.0% |
| ! | TTATCATTGTGACATACTAA+AGG | - | chr4.1:3920406-3920425 | None:intergenic | 25.0% |
| ! | TTCAACAATGCAAATTCAAA+GGG | - | chr4.1:3919562-3919581 | None:intergenic | 25.0% |
| !! | ATAATTGCTGTTCATTTGAA+TGG | + | chr4.1:3919748-3919767 | MS.gene048987:intron | 25.0% |
| !! | CAGTTTTCTTGCATTTAATT+AGG | + | chr4.1:3923726-3923745 | MS.gene048987:intron | 25.0% |
| !! | CCTTATTTATAAAGATAACG+TGG | + | chr4.1:3920315-3920334 | MS.gene048987:intron | 25.0% |
| !!! | ATTTAATTAGGCTTTGAACT+CGG | + | chr4.1:3923738-3923757 | MS.gene048987:intron | 25.0% |
| !!! | CGCTTAATTTATTTTCTTGT+TGG | - | chr4.1:3920960-3920979 | None:intergenic | 25.0% |
| !!! | TAAAAAGTGTTGTCAAATAG+TGG | + | chr4.1:3922384-3922403 | MS.gene048987:intron | 25.0% |
| !!! | TACTGAAACAATAGCTTTAT+AGG | - | chr4.1:3920450-3920469 | None:intergenic | 25.0% |
| !!! | TATTTTCTGAGAATTACTAC+TGG | + | chr4.1:3924493-3924512 | MS.gene048987:intron | 25.0% |
| !!! | TCTTGGGTATGATTATTTTA+TGG | + | chr4.1:3921464-3921483 | MS.gene048987:intron | 25.0% |
| !!! | TGCATTTTTTAACGAAATCT+AGG | - | chr4.1:3922727-3922746 | None:intergenic | 25.0% |
| AAAATGTGAATAAATGTGGG+AGG | - | chr4.1:3924267-3924286 | None:intergenic | 30.0% | |
| AACAACTCCAATATATCTTC+TGG | - | chr4.1:3923934-3923953 | None:intergenic | 30.0% | |
| AAGTCAAAATAATAGAGGTC+TGG | - | chr4.1:3921279-3921298 | None:intergenic | 30.0% | |
| AATATTATCTGATCCTGTGT+TGG | - | chr4.1:3921396-3921415 | None:intergenic | 30.0% | |
| AATGAAGGAAAAAAGATACG+AGG | + | chr4.1:3924468-3924487 | MS.gene048987:intron | 30.0% | |
| AATGTTGGATGTCAAATAGT+TGG | - | chr4.1:3919954-3919973 | None:intergenic | 30.0% | |
| ACAAGCAATGTTGTCAATAA+CGG | - | chr4.1:3922478-3922497 | None:intergenic | 30.0% | |
| ACAGTCTTAATAGATAGCAA+GGG | - | chr4.1:3923481-3923500 | None:intergenic | 30.0% | |
| ACCTATAGTAGAAAAGATTG+TGG | + | chr4.1:3921069-3921088 | MS.gene048987:intron | 30.0% | |
| AGATATTAAGAGTAAAGCAG+TGG | - | chr4.1:3921447-3921466 | None:intergenic | 30.0% | |
| AGATCTCAACACAGTTAAAA+GGG | - | chr4.1:3923381-3923400 | None:intergenic | 30.0% | |
| AGCACTTTAATGACAGAAAA+TGG | - | chr4.1:3922647-3922666 | None:intergenic | 30.0% | |
| AGCTTACAATTCAAAGCAAA+AGG | - | chr4.1:3921783-3921802 | None:intergenic | 30.0% | |
| ATCTTACTCTTACACATATG+TGG | + | chr4.1:3922691-3922710 | MS.gene048987:intron | 30.0% | |
| CAATTCTGCTTACTTAAGAA+TGG | + | chr4.1:3921847-3921866 | MS.gene048987:intron | 30.0% | |
| CACTTTAATGACAGAAAATG+GGG | - | chr4.1:3922645-3922664 | None:intergenic | 30.0% | |
| CATGTAGTATTCTATGATGT+AGG | + | chr4.1:3923897-3923916 | MS.gene048987:intron | 30.0% | |
| CTAAGTTGTACTAAGTTGTT+TGG | - | chr4.1:3922203-3922222 | None:intergenic | 30.0% | |
| CTACATGAATCACTAAACAA+AGG | - | chr4.1:3923884-3923903 | None:intergenic | 30.0% | |
| CTATATGGGTCAAATAGAAT+TGG | + | chr4.1:3920105-3920124 | MS.gene048987:intron | 30.0% | |
| CTGCTTTACTCTTAATATCT+TGG | + | chr4.1:3921447-3921466 | MS.gene048987:intron | 30.0% | |
| CTTCAACAATGCAAATTCAA+AGG | - | chr4.1:3919563-3919582 | None:intergenic | 30.0% | |
| GACCAAAGAAAACTACTATA+TGG | - | chr4.1:3919920-3919939 | None:intergenic | 30.0% | |
| GATTAGGTTAATCAAACATC+TGG | + | chr4.1:3921519-3921538 | MS.gene048987:intron | 30.0% | |
| GATTATATATTTATCGCTGC+AGG | + | chr4.1:3924058-3924077 | MS.gene048987:intron | 30.0% | |
| GCACTTTAATGACAGAAAAT+GGG | - | chr4.1:3922646-3922665 | None:intergenic | 30.0% | |
| GTATTTCCATTTGATTATGG+TGG | + | chr4.1:3922619-3922638 | MS.gene048987:intron | 30.0% | |
| GTGGTAAAATTAGACAAGAT+AGG | + | chr4.1:3921010-3921029 | MS.gene048987:intron | 30.0% | |
| GTTACACGGTTTAAATATCT+TGG | + | chr4.1:3920748-3920767 | MS.gene048987:intron | 30.0% | |
| TAAACCAAGTTAACCTTTGT+AGG | + | chr4.1:3920648-3920667 | MS.gene048987:intron | 30.0% | |
| TAAACCATGGAATTTAAGCT+GGG | + | chr4.1:3920814-3920833 | MS.gene048987:intron | 30.0% | |
| TAACATTACCTCTGGTAAAT+AGG | - | chr4.1:3923832-3923851 | None:intergenic | 30.0% | |
| TAGAAAAGATTGTGGAAACT+AGG | + | chr4.1:3921077-3921096 | MS.gene048987:intron | 30.0% | |
| TAGGCAAATAGCTAAATGTA+TGG | + | chr4.1:3922879-3922898 | MS.gene048987:intron | 30.0% | |
| TATCTATTAAGACTGTGTGA+TGG | + | chr4.1:3923485-3923504 | MS.gene048987:intron | 30.0% | |
| TATTTAAACCGTGTAACTTG+TGG | - | chr4.1:3920745-3920764 | None:intergenic | 30.0% | |
| TGCACATTGTTGTCAAATAA+CGG | + | chr4.1:3922307-3922326 | MS.gene048987:intron | 30.0% | |
| TGGTATTTGATAGAACACTA+TGG | + | chr4.1:3921169-3921188 | MS.gene048987:intron | 30.0% | |
| TGTGTAAGAGTAAGATCATA+TGG | - | chr4.1:3922687-3922706 | None:intergenic | 30.0% | |
| TGTGTGTCTATTATGGATAT+TGG | + | chr4.1:3920286-3920305 | MS.gene048987:intron | 30.0% | |
| TGTTTCAGTATATTACTTGC+AGG | + | chr4.1:3920460-3920479 | MS.gene048987:intron | 30.0% | |
| TTCAAAGTTTCATGTCTTGT+AGG | + | chr4.1:3924388-3924407 | MS.gene048987:intron | 30.0% | |
| TTGCCAAGTCAAAATAATAG+AGG | - | chr4.1:3921284-3921303 | None:intergenic | 30.0% | |
| TTGCTAATGAGTACAATACT+TGG | + | chr4.1:3924360-3924379 | MS.gene048987:intron | 30.0% | |
| ! | ACAAATTTGCTTTCTAGTAC+TGG | + | chr4.1:3924318-3924337 | MS.gene048987:intron | 30.0% |
| ! | CACATTTTCCATTTGGTATA+CGG | + | chr4.1:3924279-3924298 | MS.gene048987:intron | 30.0% |
| ! | TAAAAGAATCTACTTGCTGA+CGG | - | chr4.1:3923972-3923991 | None:intergenic | 30.0% |
| ! | TCCACAATCTTTTCTACTAT+AGG | - | chr4.1:3921073-3921092 | None:intergenic | 30.0% |
| ! | TCCCATATAGTAGTTTTCTT+TGG | + | chr4.1:3919915-3919934 | MS.gene048987:intron | 30.0% |
| ! | TCTACTATGGTGTTTCTAAT+GGG | + | chr4.1:3919991-3920010 | MS.gene048987:intron | 30.0% |
| ! | TTCAAGTCAAATTTTAAGCC+AGG | + | chr4.1:3919310-3919329 | MS.gene048987:intron | 30.0% |
| !! | AGAACTTGATTTGCAAAAAC+AGG | + | chr4.1:3919827-3919846 | MS.gene048987:intron | 30.0% |
| !! | ATGACAGAAAATTTTGATGC+TGG | + | chr4.1:3922801-3922820 | MS.gene048987:intron | 30.0% |
| !! | TGGCTTAAAATTTGACTTGA+AGG | - | chr4.1:3919311-3919330 | None:intergenic | 30.0% |
| !! | TGTGCAAAAGTATTCCTAAA+TGG | - | chr4.1:3922293-3922312 | None:intergenic | 30.0% |
| !!! | AGACCTCTATTATTTTGACT+TGG | + | chr4.1:3921278-3921297 | MS.gene048987:intron | 30.0% |
| !!! | ATGGTTTTGAACAACCATTT+AGG | + | chr4.1:3922276-3922295 | MS.gene048987:intron | 30.0% |
| !!! | TTGTCTTTTCTAGAACAAAC+TGG | - | chr4.1:3920342-3920361 | None:intergenic | 30.0% |
| AAAACTGTATCCCATGATGA+GGG | + | chr4.1:3923619-3923638 | MS.gene048987:intron | 35.0% | |
| AAAATACTTAGGGAGACAAG+TGG | - | chr4.1:3921624-3921643 | None:intergenic | 35.0% | |
| AAATGTCACTAGAGGGAAAA+AGG | + | chr4.1:3919436-3919455 | MS.gene048987:CDS | 35.0% | |
| AAGGAGAGATACTTACCTAA+TGG | - | chr4.1:3921764-3921783 | None:intergenic | 35.0% | |
| AATGTCACTAGAGGGAAAAA+GGG | + | chr4.1:3919437-3919456 | MS.gene048987:CDS | 35.0% | |
| ACTGTCTCGTACAACATTAT+CGG | - | chr4.1:3920919-3920938 | None:intergenic | 35.0% | |
| ACTTGGATCAATTCCAAACT+GGG | - | chr4.1:3924111-3924130 | None:intergenic | 35.0% | |
| AGAGAGAGAGAGAGTTAATA+AGG | - | chr4.1:3920249-3920268 | None:intergenic | 35.0% | |
| AGATATGCAATGCACTAGTA+AGG | - | chr4.1:3923156-3923175 | None:intergenic | 35.0% | |
| AGCTGCTATGACATAAAAGA+TGG | - | chr4.1:3920054-3920073 | None:intergenic | 35.0% | |
| AGGCTTACACGTTAATAGAA+AGG | - | chr4.1:3921807-3921826 | None:intergenic | 35.0% | |
| AGGTTAATCAAACATCTGGA+AGG | + | chr4.1:3921523-3921542 | MS.gene048987:intron | 35.0% | |
| ATAGAAGGAGATGTAAACCA+TGG | + | chr4.1:3920801-3920820 | MS.gene048987:intron | 35.0% | |
| ATAGAGTGAGTGTGTTTCAA+AGG | - | chr4.1:3920089-3920108 | None:intergenic | 35.0% | |
| ATATTCTGACCTCTGATTCT+TGG | + | chr4.1:3921493-3921512 | MS.gene048987:intron | 35.0% | |
| ATCAATGGCAATATCAGATC+AGG | - | chr4.1:3923777-3923796 | None:intergenic | 35.0% | |
| ATCTTCTGGTCCAGTTAAAT+TGG | + | chr4.1:3923278-3923297 | MS.gene048987:CDS | 35.0% | |
| ATGACAGAAAGTTCTTCTTC+TGG | + | chr4.1:3921571-3921590 | MS.gene048987:CDS | 35.0% | |
| ATGGTTGTTCAAAACCATAC+AGG | - | chr4.1:3922274-3922293 | None:intergenic | 35.0% | |
| ATGTCAAATAGTTGGAGGTA+GGG | - | chr4.1:3919946-3919965 | None:intergenic | 35.0% | |
| ATTAGTATGGTTACGTACAC+AGG | + | chr4.1:3922768-3922787 | MS.gene048987:intron | 35.0% | |
| CAAAGATGAAGATGTTGAGT+TGG | + | chr4.1:3920983-3921002 | MS.gene048987:intron | 35.0% | |
| CAATGTTGCTCAATATTCTC+TGG | - | chr4.1:3923311-3923330 | None:intergenic | 35.0% | |
| CACAGTCTTAATAGATAGCA+AGG | - | chr4.1:3923482-3923501 | None:intergenic | 35.0% | |
| CAGAGAATATTGAGCAACAT+TGG | + | chr4.1:3923309-3923328 | MS.gene048987:CDS | 35.0% | |
| CAGATCTCAACACAGTTAAA+AGG | - | chr4.1:3923382-3923401 | None:intergenic | 35.0% | |
| CATTCCATAGTGCTAAACAA+CGG | + | chr4.1:3920774-3920793 | MS.gene048987:intron | 35.0% | |
| CATTGGTATAACATTACCTC+TGG | - | chr4.1:3923840-3923859 | None:intergenic | 35.0% | |
| CCTATACACAATAAAGGTTC+AGG | - | chr4.1:3921682-3921701 | None:intergenic | 35.0% | |
| CCTGAACCTTTATTGTGTAT+AGG | + | chr4.1:3921679-3921698 | MS.gene048987:intron | 35.0% | |
| CTAAACAACGGAGAAATAGA+AGG | + | chr4.1:3920786-3920805 | MS.gene048987:intron | 35.0% | |
| CTAATCAAACCAAGAATCAG+AGG | - | chr4.1:3921505-3921524 | None:intergenic | 35.0% | |
| GAAACACACTCACTCTATAT+GGG | + | chr4.1:3920091-3920110 | MS.gene048987:intron | 35.0% | |
| GAATATCCAAACTAAGTACC+TGG | - | chr4.1:3923051-3923070 | None:intergenic | 35.0% | |
| GATATGCAATGCACTAGTAA+GGG | - | chr4.1:3923155-3923174 | None:intergenic | 35.0% | |
| GCAAAACAATAGCAGTTTGT+TGG | - | chr4.1:3922350-3922369 | None:intergenic | 35.0% | |
| GGTTAATCAAACATCTGGAA+GGG | + | chr4.1:3921524-3921543 | MS.gene048987:intron | 35.0% | |
| GTAAACCATGGAATTTAAGC+TGG | + | chr4.1:3920813-3920832 | MS.gene048987:intron | 35.0% | |
| GTATCCTACAAAGGTTAACT+TGG | - | chr4.1:3920655-3920674 | None:intergenic | 35.0% | |
| GTATCTTCAGAAACTTCAAG+CGG | - | chr4.1:3923008-3923027 | None:intergenic | 35.0% | |
| GTCATATACCACAAGTTACA+CGG | + | chr4.1:3920734-3920753 | MS.gene048987:intron | 35.0% | |
| GTTAGAAGTGAACAAGTGTT+GGG | + | chr4.1:3920560-3920579 | MS.gene048987:intron | 35.0% | |
| TAAAAGATGGTACTCGTCTT+AGG | - | chr4.1:3920041-3920060 | None:intergenic | 35.0% | |
| TACTTGGATCAATTCCAAAC+TGG | - | chr4.1:3924112-3924131 | None:intergenic | 35.0% | |
| TAGAGTGAGTGTGTTTCAAA+GGG | - | chr4.1:3920088-3920107 | None:intergenic | 35.0% | |
| TATATTACTTGCAGGACCTA+TGG | + | chr4.1:3920468-3920487 | MS.gene048987:intron | 35.0% | |
| TATGCCTTCTGTGTGAATTT+AGG | - | chr4.1:3920628-3920647 | None:intergenic | 35.0% | |
| TCAAAGGGATGTTAAAAGCA+AGG | - | chr4.1:3919547-3919566 | None:intergenic | 35.0% | |
| TCAGATAATATTTCCGAACG+AGG | + | chr4.1:3921404-3921423 | MS.gene048987:CDS | 35.0% | |
| TCATTGTGACATACTAAAGG+AGG | - | chr4.1:3920403-3920422 | None:intergenic | 35.0% | |
| TCTTAAGTAAGCAGAATTGC+AGG | - | chr4.1:3921846-3921865 | None:intergenic | 35.0% | |
| TGAAACACACTCACTCTATA+TGG | + | chr4.1:3920090-3920109 | MS.gene048987:intron | 35.0% | |
| TGACTCATCGTAGAATTGAT+AGG | + | chr4.1:3919800-3919819 | MS.gene048987:intron | 35.0% | |
| TGATCTGATATTGCCATTGA+TGG | + | chr4.1:3923776-3923795 | MS.gene048987:CDS | 35.0% | |
| TGGTTGTTCAAAACCATACA+GGG | - | chr4.1:3922273-3922292 | None:intergenic | 35.0% | |
| TGTACCTAAATTCACACAGA+AGG | + | chr4.1:3920621-3920640 | MS.gene048987:intron | 35.0% | |
| TGTGTTTCAAAGGGTAAGTT+GGG | - | chr4.1:3920079-3920098 | None:intergenic | 35.0% | |
| TGTTAGAAGTGAACAAGTGT+TGG | + | chr4.1:3920559-3920578 | MS.gene048987:intron | 35.0% | |
| TGTTTGAACGTATCCTACAA+AGG | - | chr4.1:3920664-3920683 | None:intergenic | 35.0% | |
| TTGGTCTCCAGAAGATATAT+TGG | + | chr4.1:3923924-3923943 | MS.gene048987:CDS | 35.0% | |
| TTTCATGTCTTGTAGGTTTC+AGG | + | chr4.1:3924395-3924414 | MS.gene048987:intron | 35.0% | |
| ! | AATTTTAAGCCAGGAAGATC+TGG | + | chr4.1:3919319-3919338 | MS.gene048987:intron | 35.0% |
| ! | ATTCTATGATGTAGGGTACT+TGG | + | chr4.1:3923905-3923924 | MS.gene048987:intron | 35.0% |
| ! | ATTTTAAGCCAGGAAGATCT+GGG | + | chr4.1:3919320-3919339 | MS.gene048987:intron | 35.0% |
| ! | CTCTACTATGGTGTTTCTAA+TGG | + | chr4.1:3919990-3920009 | MS.gene048987:intron | 35.0% |
| ! | CTCTGATTCTTGGTTTGATT+AGG | + | chr4.1:3921503-3921522 | MS.gene048987:intron | 35.0% |
| ! | GATGCTGGTAACCTTTTATT+TGG | + | chr4.1:3922816-3922835 | MS.gene048987:intron | 35.0% |
| ! | GCTTGAAGTTTCTGAAGATA+CGG | + | chr4.1:3923007-3923026 | MS.gene048987:CDS | 35.0% |
| !! | ATTTGACTTGAAGGTTACAG+TGG | - | chr4.1:3919302-3919321 | None:intergenic | 35.0% |
| !! | GGTTTGTTATGTCTATTGAC+AGG | + | chr4.1:3919386-3919405 | MS.gene048987:intron | 35.0% |
| !! | GTTCACAGTTTTGTCTTTTC+TGG | + | chr4.1:3924572-3924591 | MS.gene048987:CDS | 35.0% |
| !! | TTTGCCTATGTCACTTTGAA+AGG | - | chr4.1:3922867-3922886 | None:intergenic | 35.0% |
| !!! | AAGTGGTTGTTTTTGTCTCA+GGG | + | chr4.1:3919641-3919660 | MS.gene048987:intron | 35.0% |
| AAACTGTATCCCATGATGAG+GGG | + | chr4.1:3923620-3923639 | MS.gene048987:intron | 40.0% | |
| AAAGTTCTTCTTCTGGATGC+AGG | + | chr4.1:3921578-3921597 | MS.gene048987:CDS | 40.0% | |
| AAGCTGGGTGGTTAAAATAG+AGG | + | chr4.1:3920829-3920848 | MS.gene048987:intron | 40.0% | |
| ACTAGCGATGTAACATCTTC+TGG | + | chr4.1:3923264-3923283 | MS.gene048987:CDS | 40.0% | |
| ACTTACCTAATGGTCTGTTG+AGG | - | chr4.1:3921754-3921773 | None:intergenic | 40.0% | |
| AGATTGTGGAAACTAGGCTT+AGG | + | chr4.1:3921083-3921102 | MS.gene048987:intron | 40.0% | |
| ATACTAAAGGAGGAAAGTGG+AGG | - | chr4.1:3920393-3920412 | None:intergenic | 40.0% | |
| ATACTAATGCCCCTCATCAT+GGG | - | chr4.1:3923632-3923651 | None:intergenic | 40.0% | |
| ATCTCAATCTTGTACCCCAA+TGG | + | chr4.1:3924656-3924675 | MS.gene048987:CDS | 40.0% | |
| ATGACAACATTGGAGAGAGT+TGG | + | chr4.1:3921040-3921059 | MS.gene048987:intron | 40.0% | |
| ATGTTGTCAATAACGGTCGT+CGG | - | chr4.1:3922471-3922490 | None:intergenic | 40.0% | |
| ATTGATGGAGACGTTACCAT+TGG | + | chr4.1:3923791-3923810 | MS.gene048987:CDS | 40.0% | |
| CAAAACTGTATCCCATGATG+AGG | + | chr4.1:3923618-3923637 | MS.gene048987:intron | 40.0% | |
| CAATGCACTAGTAAGGGATT+TGG | - | chr4.1:3923149-3923168 | None:intergenic | 40.0% | |
| CAGATAGATTTGTCCCAGTT+TGG | + | chr4.1:3924095-3924114 | MS.gene048987:CDS | 40.0% | |
| CCACTTCAACTAAAAACCAG+CGG | - | chr4.1:3919627-3919646 | None:intergenic | 40.0% | |
| CGAAAAGTCAATCGCTACAT+TGG | - | chr4.1:3923857-3923876 | None:intergenic | 40.0% | |
| CGTTGTTTAGCACTATGGAA+TGG | - | chr4.1:3920776-3920795 | None:intergenic | 40.0% | |
| CTACTTGGATTCATCCATTG+GGG | - | chr4.1:3924673-3924692 | None:intergenic | 40.0% | |
| CTCCAATCTAGTGTGTTGTA+GGG | + | chr4.1:3924229-3924248 | MS.gene048987:intron | 40.0% | |
| CTCTCGTTGTGTGTCTATTA+TGG | + | chr4.1:3920279-3920298 | MS.gene048987:intron | 40.0% | |
| CTGTGTGAATTTAGGTACAG+TGG | - | chr4.1:3920620-3920639 | None:intergenic | 40.0% | |
| GACATACTAAAGGAGGAAAG+TGG | - | chr4.1:3920396-3920415 | None:intergenic | 40.0% | |
| GAGATTATTACCTGGATTGC+AGG | - | chr4.1:3919170-3919189 | None:intergenic | 40.0% | |
| GATGTCAAATAGTTGGAGGT+AGG | - | chr4.1:3919947-3919966 | None:intergenic | 40.0% | |
| GATTACCTCAACAGACCATT+AGG | + | chr4.1:3921746-3921765 | MS.gene048987:CDS | 40.0% | |
| GCAACCTTTCAAAGTGACAT+AGG | + | chr4.1:3922860-3922879 | MS.gene048987:intron | 40.0% | |
| GCATTAGTATGCAGTTTGAC+GGG | + | chr4.1:3923642-3923661 | MS.gene048987:intron | 40.0% | |
| GCTGGTAAAATGTCACTAGA+GGG | + | chr4.1:3919429-3919448 | MS.gene048987:CDS | 40.0% | |
| GGCATTAGTATGCAGTTTGA+CGG | + | chr4.1:3923641-3923660 | MS.gene048987:intron | 40.0% | |
| GTGTGTTTCAAAGGGTAAGT+TGG | - | chr4.1:3920080-3920099 | None:intergenic | 40.0% | |
| GTGTTTCAAAGGGTAAGTTG+GGG | - | chr4.1:3920078-3920097 | None:intergenic | 40.0% | |
| GTTGGATGTCAAATAGTTGG+AGG | - | chr4.1:3919951-3919970 | None:intergenic | 40.0% | |
| TCTCATCCAGGTACTTAGTT+TGG | + | chr4.1:3923042-3923061 | MS.gene048987:intron | 40.0% | |
| TCTCCAATCTAGTGTGTTGT+AGG | + | chr4.1:3924228-3924247 | MS.gene048987:intron | 40.0% | |
| TGACAACATTGGAGAGAGTT+GGG | + | chr4.1:3921041-3921060 | MS.gene048987:intron | 40.0% | |
| TGCTCAAAAATAGCCTCGTT+CGG | - | chr4.1:3921420-3921439 | None:intergenic | 40.0% | |
| TGCTGGTAAAATGTCACTAG+AGG | + | chr4.1:3919428-3919447 | MS.gene048987:CDS | 40.0% | |
| TGGAGATCTGCCAATTTAAC+TGG | - | chr4.1:3923291-3923310 | None:intergenic | 40.0% | |
| TGTAACTTATTACCTGCAGC+AGG | - | chr4.1:3923336-3923355 | None:intergenic | 40.0% | |
| TTCAGAAACTTCAAGCGGAA+GGG | - | chr4.1:3923003-3923022 | None:intergenic | 40.0% | |
| TTCCAACTTTCACAAAGTGC+AGG | - | chr4.1:3920709-3920728 | None:intergenic | 40.0% | |
| TTCCATTTGGTATACGGTAG+AGG | + | chr4.1:3924285-3924304 | MS.gene048987:intron | 40.0% | |
| TTCCTGCACTTTGTGAAAGT+TGG | + | chr4.1:3920704-3920723 | MS.gene048987:intron | 40.0% | |
| TTCTCCGTTGTTTAGCACTA+TGG | - | chr4.1:3920781-3920800 | None:intergenic | 40.0% | |
| TTGAAGATGACATCTCATCC+AGG | + | chr4.1:3923030-3923049 | MS.gene048987:CDS | 40.0% | |
| ! | AATGGTAACGTCTCCATCAA+TGG | - | chr4.1:3923792-3923811 | None:intergenic | 40.0% |
| ! | CAAACTTTTAGTGTCCAGTC+AGG | - | chr4.1:3923188-3923207 | None:intergenic | 40.0% |
| ! | TCTAGCTTCCTATTTACCAG+AGG | + | chr4.1:3923821-3923840 | MS.gene048987:CDS | 40.0% |
| ! | TTAGGTGATTCGGAAATGTG+TGG | - | chr4.1:3920023-3920042 | None:intergenic | 40.0% |
| ! | TTTGCTTTCTAGTACTGGAG+TGG | + | chr4.1:3924323-3924342 | MS.gene048987:intron | 40.0% |
| !! | AAAGTACTGCTCAAGCTGAA+TGG | + | chr4.1:3920870-3920889 | MS.gene048987:intron | 40.0% |
| !! | AAGATGTTGAGTTGGATGTG+TGG | + | chr4.1:3920991-3921010 | MS.gene048987:intron | 40.0% |
| !! | CACAGTTTTGTCTTTTCTGG+AGG | + | chr4.1:3924575-3924594 | MS.gene048987:CDS | 40.0% |
| !!! | AGGGACTAGTTCATTTTCAG+TGG | + | chr4.1:3919669-3919688 | MS.gene048987:CDS | 40.0% |
| !!! | CTGATTCTTTGTTTTCCCCT+TGG | + | chr4.1:3924542-3924561 | MS.gene048987:intron | 40.0% |
| !!! | GAAGTGGTTGTTTTTGTCTC+AGG | + | chr4.1:3919640-3919659 | MS.gene048987:intron | 40.0% |
| AAACAGACTCACGCATCTGT+AGG | - | chr4.1:3922004-3922023 | None:intergenic | 45.0% | |
| AACTGTGAACTTGTCTGCCA+AGG | - | chr4.1:3924562-3924581 | None:intergenic | 45.0% | |
| AACTTGGTTGTCCCGAACTT+TGG | + | chr4.1:3923231-3923250 | MS.gene048987:CDS | 45.0% | |
| AATAGAGGTCTGGAAAGAGC+AGG | - | chr4.1:3921269-3921288 | None:intergenic | 45.0% | |
| ACCACCCAGCTTAAATTCCA+TGG | - | chr4.1:3920821-3920840 | None:intergenic | 45.0% | |
| ACCATGGAATTTAAGCTGGG+TGG | + | chr4.1:3920817-3920836 | MS.gene048987:intron | 45.0% | |
| ACTGTGAACTTGTCTGCCAA+GGG | - | chr4.1:3924561-3924580 | None:intergenic | 45.0% | |
| AGCCTCTACCGTATACCAAA+TGG | - | chr4.1:3924290-3924309 | None:intergenic | 45.0% | |
| AGGACCTATGGAAACTGTTG+GGG | + | chr4.1:3920480-3920499 | MS.gene048987:intron | 45.0% | |
| ATGGGGCCACCATAATCAAA+TGG | - | chr4.1:3922628-3922647 | None:intergenic | 45.0% | |
| CAGGACCTATGGAAACTGTT+GGG | + | chr4.1:3920479-3920498 | MS.gene048987:intron | 45.0% | |
| CAGTACTTTCGTGTCACATG+AGG | - | chr4.1:3920859-3920878 | None:intergenic | 45.0% | |
| CATACTAATGCCCCTCATCA+TGG | - | chr4.1:3923633-3923652 | None:intergenic | 45.0% | |
| CATCAGGTTCTTCTTCACCA+AGG | - | chr4.1:3922977-3922996 | None:intergenic | 45.0% | |
| CCATAGTAGAGTTGAGCAGA+TGG | - | chr4.1:3919981-3920000 | None:intergenic | 45.0% | |
| CCATCTGCTCAACTCTACTA+TGG | + | chr4.1:3919978-3919997 | MS.gene048987:intron | 45.0% | |
| CCCAATGGATGAATCCAAGT+AGG | + | chr4.1:3924671-3924690 | MS.gene048987:CDS | 45.0% | |
| CTATTGACAGGAAACTCTCC+TGG | + | chr4.1:3919398-3919417 | MS.gene048987:intron | 45.0% | |
| CTTCAGAAACTTCAAGCGGA+AGG | - | chr4.1:3923004-3923023 | None:intergenic | 45.0% | |
| GACAACATTGGAGAGAGTTG+GGG | + | chr4.1:3921042-3921061 | MS.gene048987:intron | 45.0% | |
| GGAATCTAGGCAAGATGATC+AGG | + | chr4.1:3924626-3924645 | MS.gene048987:CDS | 45.0% | |
| GGAGAAGTAACAACTACAGC+TGG | - | chr4.1:3924213-3924232 | None:intergenic | 45.0% | |
| GGTACTCGTCTTAGGTGATT+CGG | - | chr4.1:3920033-3920052 | None:intergenic | 45.0% | |
| GTCCCTACAACACACTAGAT+TGG | - | chr4.1:3924234-3924253 | None:intergenic | 45.0% | |
| GTTGCATCCACACCAAAGTT+CGG | - | chr4.1:3923246-3923265 | None:intergenic | 45.0% | |
| GTTGGAAAGAGCTGCAAACT+TGG | + | chr4.1:3923215-3923234 | MS.gene048987:intron | 45.0% | |
| GTTGTACGAGACAGTGTTCT+AGG | + | chr4.1:3920924-3920943 | MS.gene048987:intron | 45.0% | |
| TAGTAGAGTTGAGCAGATGG+AGG | - | chr4.1:3919978-3919997 | None:intergenic | 45.0% | |
| TATCCGGTGCAAGTACATAC+CGG | - | chr4.1:3922246-3922265 | None:intergenic | 45.0% | |
| TCCTGACGAAGGTAATCACT+TGG | + | chr4.1:3923442-3923461 | MS.gene048987:intron | 45.0% | |
| TCTCCAAGTCTGAGGAATCT+AGG | + | chr4.1:3924613-3924632 | MS.gene048987:CDS | 45.0% | |
| TGAGCAGATGGAGGAAATGT+TGG | - | chr4.1:3919969-3919988 | None:intergenic | 45.0% | |
| TTCTCACTAACAGAGCTCCT+TGG | + | chr4.1:3922957-3922976 | MS.gene048987:intron | 45.0% | |
| TTCTTCTTCTGGATGCAGGT+TGG | + | chr4.1:3921582-3921601 | MS.gene048987:intron | 45.0% | |
| TTCTTGACCTAAGCCAACAC+AGG | + | chr4.1:3921380-3921399 | MS.gene048987:intron | 45.0% | |
| TTGCATCCACACCAAAGTTC+GGG | - | chr4.1:3923245-3923264 | None:intergenic | 45.0% | |
| TTGCCTAGATTCCTCAGACT+TGG | - | chr4.1:3924619-3924638 | None:intergenic | 45.0% | |
| TTGTGGAAACTAGGCTTAGG+TGG | + | chr4.1:3921086-3921105 | MS.gene048987:intron | 45.0% | |
| ! | AACCATACAGGGTGCTTATC+CGG | - | chr4.1:3922262-3922281 | None:intergenic | 45.0% |
| ! | AAGCCTTGTCCTACTAAGTG+GGG | - | chr4.1:3921218-3921237 | None:intergenic | 45.0% |
| ! | AGCGTGTTACTCTTCACTTC+TGG | - | chr4.1:3922927-3922946 | None:intergenic | 45.0% |
| ! | CAAGCCTTGTCCTACTAAGT+GGG | - | chr4.1:3921219-3921238 | None:intergenic | 45.0% |
| ! | GAATCTACTTGCTGACGGAA+AGG | - | chr4.1:3923967-3923986 | None:intergenic | 45.0% |
| ! | TTTTACCAGCACGAAACTCC+AGG | - | chr4.1:3919419-3919438 | None:intergenic | 45.0% |
| ! | TTTTTGTCTCAGGGTGAGGA+GGG | + | chr4.1:3919650-3919669 | MS.gene048987:intron | 45.0% |
| !! | ATCTGATCCTGTGTTGGCTT+AGG | - | chr4.1:3921390-3921409 | None:intergenic | 45.0% |
| !!! | CCGCTGGTTTTTAGTTGAAG+TGG | + | chr4.1:3919624-3919643 | MS.gene048987:intron | 45.0% |
| !!! | GAACGAGGCTATTTTTGAGC+AGG | + | chr4.1:3921419-3921438 | MS.gene048987:CDS | 45.0% |
| !!! | GTTGTTTTTGTCTCAGGGTG+AGG | + | chr4.1:3919646-3919665 | MS.gene048987:intron | 45.0% |
| AAGGACTCGTTCGCATTGCT+AGG | + | chr4.1:3919478-3919497 | MS.gene048987:CDS | 50.0% | |
| ACTTCCATCCCAGATCTTCC+TGG | - | chr4.1:3919331-3919350 | None:intergenic | 50.0% | |
| AGAATTGCAGGATCGTCCAC+TGG | - | chr4.1:3921834-3921853 | None:intergenic | 50.0% | |
| AGGACTCGTTCGCATTGCTA+GGG | + | chr4.1:3919479-3919498 | MS.gene048987:CDS | 50.0% | |
| CAACCCCACTTAGTAGGACA+AGG | + | chr4.1:3921212-3921231 | MS.gene048987:intron | 50.0% | |
| CCACTTAGTAGGACAAGGCT+TGG | + | chr4.1:3921217-3921236 | MS.gene048987:intron | 50.0% | |
| CCTATGGAAACTGTTGGGGA+AGG | + | chr4.1:3920484-3920503 | MS.gene048987:intron | 50.0% | |
| CCTTCCCCAACAGTTTCCAT+AGG | - | chr4.1:3920487-3920506 | None:intergenic | 50.0% | |
| CGCTCGCTCTTTGCGTTTAT+TGG | + | chr4.1:3919223-3919242 | MS.gene048987:intron | 50.0% | |
| CTAAAAACCAGCGGCAGTCA+TGG | - | chr4.1:3919618-3919637 | None:intergenic | 50.0% | |
| CTGTGAACTTGTCTGCCAAG+GGG | - | chr4.1:3924560-3924579 | None:intergenic | 50.0% | |
| CTTGTCCTACTAAGTGGGGT+TGG | - | chr4.1:3921214-3921233 | None:intergenic | 50.0% | |
| GCAGGACCTATGGAAACTGT+TGG | + | chr4.1:3920478-3920497 | MS.gene048987:intron | 50.0% | |
| GCCAAGTGATTACCTTCGTC+AGG | - | chr4.1:3923446-3923465 | None:intergenic | 50.0% | |
| GGATTCTGTCTCCAAGTCTG+AGG | + | chr4.1:3924605-3924624 | MS.gene048987:CDS | 50.0% | |
| GTAGTTCCTGATGCACGCAA+AGG | + | chr4.1:3919459-3919478 | MS.gene048987:CDS | 50.0% | |
| TAAGCCAGGAAGATCTGGGA+TGG | + | chr4.1:3919324-3919343 | MS.gene048987:intron | 50.0% | |
| TCAAGCGGAAGGGATACATC+AGG | - | chr4.1:3922993-3923012 | None:intergenic | 50.0% | |
| TGTAGCCAACCCCACTTAGT+AGG | + | chr4.1:3921206-3921225 | MS.gene048987:intron | 50.0% | |
| TGTAGGTTTCAGGCGTGTGT+AGG | + | chr4.1:3924405-3924424 | MS.gene048987:intron | 50.0% | |
| ! | ACGTGTAAGCCTTATGCCAG+TGG | + | chr4.1:3921815-3921834 | MS.gene048987:intron | 50.0% |
| ! | CCAAGCCTTGTCCTACTAAG+TGG | - | chr4.1:3921220-3921239 | None:intergenic | 50.0% |
| ! | CTACTTGCTGACGGAAAGGT+GGG | - | chr4.1:3923963-3923982 | None:intergenic | 50.0% |
| ! | GTAGGACAAGGCTTGGTTGT+TGG | + | chr4.1:3921224-3921243 | MS.gene048987:intron | 50.0% |
| ! | GTTTTTGTCTCAGGGTGAGG+AGG | + | chr4.1:3919649-3919668 | MS.gene048987:intron | 50.0% |
| ! | TCTACTTGCTGACGGAAAGG+TGG | - | chr4.1:3923964-3923983 | None:intergenic | 50.0% |
| !! | AAGTACATACCGGCTCTACG+TGG | - | chr4.1:3922236-3922255 | None:intergenic | 50.0% |
| !! | AGTACATACCGGCTCTACGT+GGG | - | chr4.1:3922235-3922254 | None:intergenic | 50.0% |
| !! | AGTGGAGGAGTGTTGTTGCA+AGG | - | chr4.1:3920378-3920397 | None:intergenic | 50.0% |
| !! | GATTGCAGGAAAAGCGTCGA+TGG | - | chr4.1:3919156-3919175 | None:intergenic | 50.0% |
| !! | GTCTTTTCTGGAGGCTCTTG+AGG | + | chr4.1:3924584-3924603 | MS.gene048987:CDS | 50.0% |
| !! | GTGGAGGAGTGTTGTTGCAA+GGG | - | chr4.1:3920377-3920396 | None:intergenic | 50.0% |
| !! | TGGAGGAGTGTTGTTGCAAG+GGG | - | chr4.1:3920376-3920395 | None:intergenic | 50.0% |
| AACTCAACCATGACTGCCGC+TGG | + | chr4.1:3919608-3919627 | MS.gene048987:intron | 55.0% | |
| ACGAGTCCTTTGCGTGCATC+AGG | - | chr4.1:3919468-3919487 | None:intergenic | 55.0% | |
| ACTCTCCTGGAGTTTCGTGC+TGG | + | chr4.1:3919411-3919430 | MS.gene048987:CDS | 55.0% | |
| AGCAACATTGGACCTGCTGC+AGG | + | chr4.1:3923321-3923340 | MS.gene048987:CDS | 55.0% | |
| ATTGGGTACCCACGTAGAGC+CGG | + | chr4.1:3922224-3922243 | MS.gene048987:intron | 55.0% | |
| CACCGGATAAGCACCCTGTA+TGG | + | chr4.1:3922257-3922276 | MS.gene048987:intron | 55.0% | |
| CAGGATCGTCCACTGGCATA+AGG | - | chr4.1:3921827-3921846 | None:intergenic | 55.0% | |
| GAAGCTAGACGCTGCTCCAA+TGG | - | chr4.1:3923810-3923829 | None:intergenic | 55.0% | |
| GAGCCGGTATGTACTTGCAC+CGG | + | chr4.1:3922240-3922259 | MS.gene048987:intron | 55.0% | |
| GGTTGTCCCGAACTTTGGTG+TGG | + | chr4.1:3923236-3923255 | MS.gene048987:CDS | 55.0% | |
| TCGCTGCAGGTACTTCGAAC+AGG | + | chr4.1:3924071-3924090 | MS.gene048987:intron | 55.0% | |
| ! | CGACGCTTTTCCTGCAATCC+AGG | + | chr4.1:3919157-3919176 | MS.gene048987:CDS | 55.0% |
| !! | GGAGGAGTGTTGTTGCAAGG+GGG | - | chr4.1:3920375-3920394 | None:intergenic | 55.0% |
| GAGCGAGCGAGCGAGCGAAA+AGG | - | chr4.1:3919208-3919227 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 3919140 | 3924692 | 3919140 | ID=MS.gene048987 |
| chr4.1 | mRNA | 3919140 | 3924692 | 3919140 | ID=MS.gene048987.t1;Parent=MS.gene048987 |
| chr4.1 | exon | 3919140 | 3919178 | 3919140 | ID=MS.gene048987.t1.exon1;Parent=MS.gene048987.t1 |
| chr4.1 | CDS | 3919140 | 3919178 | 3919140 | ID=cds.MS.gene048987.t1;Parent=MS.gene048987.t1 |
| chr4.1 | exon | 3919408 | 3919500 | 3919408 | ID=MS.gene048987.t1.exon2;Parent=MS.gene048987.t1 |
| chr4.1 | CDS | 3919408 | 3919500 | 3919408 | ID=cds.MS.gene048987.t1;Parent=MS.gene048987.t1 |
| chr4.1 | exon | 3919662 | 3919721 | 3919662 | ID=MS.gene048987.t1.exon3;Parent=MS.gene048987.t1 |
| chr4.1 | CDS | 3919662 | 3919721 | 3919662 | ID=cds.MS.gene048987.t1;Parent=MS.gene048987.t1 |
| chr4.1 | exon | 3921402 | 3921440 | 3921402 | ID=MS.gene048987.t1.exon4;Parent=MS.gene048987.t1 |
| chr4.1 | CDS | 3921402 | 3921440 | 3921402 | ID=cds.MS.gene048987.t1;Parent=MS.gene048987.t1 |
| chr4.1 | exon | 3921525 | 3921599 | 3921525 | ID=MS.gene048987.t1.exon5;Parent=MS.gene048987.t1 |
| chr4.1 | CDS | 3921525 | 3921599 | 3921525 | ID=cds.MS.gene048987.t1;Parent=MS.gene048987.t1 |
| chr4.1 | exon | 3921701 | 3921767 | 3921701 | ID=MS.gene048987.t1.exon6;Parent=MS.gene048987.t1 |
| chr4.1 | CDS | 3921701 | 3921767 | 3921701 | ID=cds.MS.gene048987.t1;Parent=MS.gene048987.t1 |
| chr4.1 | exon | 3922970 | 3923051 | 3922970 | ID=MS.gene048987.t1.exon7;Parent=MS.gene048987.t1 |
| chr4.1 | CDS | 3922970 | 3923051 | 3922970 | ID=cds.MS.gene048987.t1;Parent=MS.gene048987.t1 |
| chr4.1 | exon | 3923224 | 3923342 | 3923224 | ID=MS.gene048987.t1.exon8;Parent=MS.gene048987.t1 |
| chr4.1 | CDS | 3923224 | 3923342 | 3923224 | ID=cds.MS.gene048987.t1;Parent=MS.gene048987.t1 |
| chr4.1 | exon | 3923429 | 3923452 | 3923429 | ID=MS.gene048987.t1.exon9;Parent=MS.gene048987.t1 |
| chr4.1 | CDS | 3923429 | 3923452 | 3923429 | ID=cds.MS.gene048987.t1;Parent=MS.gene048987.t1 |
| chr4.1 | exon | 3923748 | 3923842 | 3923748 | ID=MS.gene048987.t1.exon10;Parent=MS.gene048987.t1 |
| chr4.1 | CDS | 3923748 | 3923842 | 3923748 | ID=cds.MS.gene048987.t1;Parent=MS.gene048987.t1 |
| chr4.1 | exon | 3923919 | 3923996 | 3923919 | ID=MS.gene048987.t1.exon11;Parent=MS.gene048987.t1 |
| chr4.1 | CDS | 3923919 | 3923996 | 3923919 | ID=cds.MS.gene048987.t1;Parent=MS.gene048987.t1 |
| chr4.1 | exon | 3924080 | 3924134 | 3924080 | ID=MS.gene048987.t1.exon12;Parent=MS.gene048987.t1 |
| chr4.1 | CDS | 3924080 | 3924134 | 3924080 | ID=cds.MS.gene048987.t1;Parent=MS.gene048987.t1 |
| chr4.1 | exon | 3924568 | 3924692 | 3924568 | ID=MS.gene048987.t1.exon13;Parent=MS.gene048987.t1 |
| chr4.1 | CDS | 3924568 | 3924692 | 3924568 | ID=cds.MS.gene048987.t1;Parent=MS.gene048987.t1 |
| Gene Sequence |
| Protein sequence |
