Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95863.t1 | XP_003631011.1 | 98.1 | 965 | 18 | 0 | 1 | 965 | 1 | 965 | 0.00E+00 | 1685.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95863.t1 | O48844 | 83.6 | 970 | 149 | 4 | 1 | 964 | 1 | 966 | 0.0e+00 | 1475.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95863.t1 | G7LCC0 | 98.1 | 965 | 18 | 0 | 1 | 965 | 1 | 965 | 0.0e+00 | 1685.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene95863 | MS.gene058594 | PPI |
| MS.gene95863 | MS.gene20187 | PPI |
| MS.gene95863 | MS.gene55853 | PPI |
| MS.gene95863 | MS.gene57118 | PPI |
| MS.gene95863 | MS.gene62646 | PPI |
| MS.gene95863 | MS.gene015610 | PPI |
| MS.gene048987 | MS.gene95863 | PPI |
| MS.gene06206 | MS.gene95863 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95863.t1 | MTR_8g106120 | 99.500 | 1001 | 5 | 0 | 1 | 1001 | 1 | 1001 | 0.0 | 2042 |
| MS.gene95863.t1 | MTR_2g067250 | 97.502 | 1001 | 23 | 1 | 1 | 1001 | 1 | 999 | 0.0 | 2003 |
| MS.gene95863.t1 | MTR_8g106120 | 99.615 | 779 | 3 | 0 | 223 | 1001 | 1 | 779 | 0.0 | 1587 |
| MS.gene95863.t1 | MTR_8g106120 | 99.723 | 721 | 2 | 0 | 1 | 721 | 1 | 721 | 0.0 | 1479 |
| MS.gene95863.t1 | MTR_3g009940 | 77.037 | 270 | 15 | 2 | 1 | 270 | 1 | 223 | 3.18e-131 | 400 |
| MS.gene95863.t1 | MTR_3g009940 | 76.978 | 139 | 10 | 2 | 694 | 832 | 224 | 340 | 6.60e-61 | 212 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95863.t1 | AT2G32730 | 84.242 | 1009 | 146 | 9 | 1 | 1001 | 1 | 1004 | 0.0 | 1673 |
| MS.gene95863.t1 | AT1G04810 | 81.621 | 1012 | 163 | 8 | 1 | 1001 | 1 | 1000 | 0.0 | 1635 |
| MS.gene95863.t1 | AT2G20580 | 21.757 | 478 | 297 | 18 | 379 | 807 | 371 | 820 | 6.88e-11 | 67.0 |
Find 269 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTTCCTGAGGGAAAATT+TGG | 0.159807 | 4.3:+966491 | MS.gene95863:CDS |
| GATCAAGATGGGTGCAATTT+TGG | 0.180441 | 4.3:+967951 | MS.gene95863:CDS |
| TCCAGCCGTTGCACTGAATT+TGG | 0.186516 | 4.3:-966626 | None:intergenic |
| CATTATTGCATTGGCATAAA+TGG | 0.189798 | 4.3:-966448 | None:intergenic |
| CCAGTTAAGTTGGCACCTTC+AGG | 0.213525 | 4.3:+968695 | MS.gene95863:CDS |
| CATCTCCACAGACTGCTTTA+TGG | 0.226890 | 4.3:-966400 | None:intergenic |
| TTGTCAGTGTCTTATGTTCT+TGG | 0.227488 | 4.3:+965859 | MS.gene95863:CDS |
| GGTTGAGCAGAGCTACTAAT+TGG | 0.236302 | 4.3:+966602 | MS.gene95863:CDS |
| AAACAAAGATGATGCTCTTT+TGG | 0.252990 | 4.3:+965931 | MS.gene95863:CDS |
| GACTATGTCCATACTCTTCT+AGG | 0.285306 | 4.3:+964917 | MS.gene95863:CDS |
| GGCTCTGATTTCTTCTCTGT+TGG | 0.292922 | 4.3:-968581 | None:intergenic |
| TGGAGAGAGCGTGAATCTTC+AGG | 0.293532 | 4.3:-963817 | None:intergenic |
| GAGGGTACCAATACCAAAAT+TGG | 0.295987 | 4.3:-968077 | None:intergenic |
| GCTTTATGGTCTTCAAAATA+AGG | 0.300890 | 4.3:-966386 | None:intergenic |
| GGAATTGCTCTTACGGTTTA+CGG | 0.306338 | 4.3:+967229 | MS.gene95863:CDS |
| CCTGAAGGTGCCAACTTAAC+TGG | 0.312725 | 4.3:-968695 | None:intergenic |
| GAATCTGCATCACTGGGTTT+TGG | 0.319869 | 4.3:-966061 | None:intergenic |
| AGGACTGCGGTCCTAGCATT+AGG | 0.329300 | 4.3:+967424 | MS.gene95863:CDS |
| TAGTGAGGCCATATCTTTGC+TGG | 0.339539 | 4.3:+967702 | MS.gene95863:CDS |
| TACTTGCCTCAGGGTGGGAC+TGG | 0.339564 | 4.3:+966703 | MS.gene95863:CDS |
| TGAGAGGTTAAACAAAATAA+AGG | 0.344216 | 4.3:+966189 | MS.gene95863:CDS |
| TTTCTTACTAGCCCTGGCTT+TGG | 0.346140 | 4.3:-968292 | None:intergenic |
| ATGCCACCATAACGTAATAT+TGG | 0.348326 | 4.3:-967304 | None:intergenic |
| CCTGCTGCAAATGACCTCTA+TGG | 0.350310 | 4.3:-966660 | None:intergenic |
| GCTCTGATTTCTTCTCTGTT+GGG | 0.354056 | 4.3:-968580 | None:intergenic |
| TGAGCAGGAACCACTCTTGC+TGG | 0.358571 | 4.3:-968632 | None:intergenic |
| TGAGGCTGCTGGTATCAGTA+TGG | 0.362240 | 4.3:+967031 | MS.gene95863:CDS |
| GTGGGAACAGTCGTAGGCTT+GGG | 0.369188 | 4.3:-968216 | None:intergenic |
| ATATGCTAGTTTCAAGTCTA+AGG | 0.370644 | 4.3:+965155 | MS.gene95863:CDS |
| AGTCTTAGAAAGTAGTCTTA+TGG | 0.371639 | 4.3:-968010 | None:intergenic |
| CTCAGCTTTCTTACTAGCCC+TGG | 0.372570 | 4.3:-968298 | None:intergenic |
| AGAGCACCACCTTCTGAGTA+TGG | 0.376878 | 4.3:-966736 | None:intergenic |
| TCCGCCAGCATCAAGGATTC+CGG | 0.379806 | 4.3:-967977 | None:intergenic |
| CGTGTATTCCAGGCGACAAT+TGG | 0.383184 | 4.3:+967894 | MS.gene95863:intron |
| GGAAACAGTCTCACTTGTTA+TGG | 0.391974 | 4.3:-966264 | None:intergenic |
| CAAAGGCTCCAGCAAAGATA+TGG | 0.396501 | 4.3:-967710 | None:intergenic |
| TTTGCTGGAGCCTTTGACTT+CGG | 0.397652 | 4.3:+967717 | MS.gene95863:CDS |
| TGACAAATGCTCAGATAATC+TGG | 0.399990 | 4.3:-965842 | None:intergenic |
| TCCACAATTGCTTCCAGTCT+AGG | 0.406822 | 4.3:-965204 | None:intergenic |
| ATTCGCGTGTTGGAACCTTC+AGG | 0.407002 | 4.3:+967815 | MS.gene95863:CDS |
| GGCATTTCCTGTGCGGGTAC+AGG | 0.408036 | 4.3:+967676 | MS.gene95863:CDS |
| AATTCTCACCTAGAAGAGTA+TGG | 0.416307 | 4.3:-964925 | None:intergenic |
| TAGCGGAACAGCAAACAATA+AGG | 0.416651 | 4.3:+967348 | MS.gene95863:CDS |
| GGACTGCGGTCCTAGCATTA+GGG | 0.417017 | 4.3:+967425 | MS.gene95863:CDS |
| GCCTCCGGAATCCTTGATGC+TGG | 0.420374 | 4.3:+967973 | MS.gene95863:CDS |
| CTGAGTAGAATCTGCATCAC+TGG | 0.422471 | 4.3:-966068 | None:intergenic |
| CCTCAGGGTGGGACTGGTGG+TGG | 0.423831 | 4.3:+966709 | MS.gene95863:CDS |
| AGCAAGAGTGGTTCCTGCTC+AGG | 0.424076 | 4.3:+968634 | MS.gene95863:CDS |
| TTCAGTGCAACGGCTGGACT+TGG | 0.424201 | 4.3:+966631 | MS.gene95863:CDS |
| CAGTTAAGTTGGCACCTTCA+GGG | 0.424877 | 4.3:+968696 | MS.gene95863:CDS |
| TCAGTAATAGCAAGAACTTC+AGG | 0.425883 | 4.3:-968752 | None:intergenic |
| CTATCCTATGCCCTTGGAGC+TGG | 0.426899 | 4.3:+964866 | MS.gene95863:CDS |
| AATCCTGTGAAACATCAAAC+AGG | 0.428256 | 4.3:-964892 | None:intergenic |
| TCTTATCTATTTCATAAGCT+TGG | 0.430502 | 4.3:+968098 | MS.gene95863:CDS |
| ACATCAACTGCTGGCGGGTC+AGG | 0.431417 | 4.3:+968791 | MS.gene95863:CDS |
| GGCCTACTCATGGTTGGAAC+AGG | 0.433364 | 4.3:+967053 | MS.gene95863:CDS |
| AGAGGGAGTTGCAAGCATAT+TGG | 0.434576 | 4.3:+965889 | MS.gene95863:CDS |
| TCCCCTGTTTGATGTTTCAC+AGG | 0.436490 | 4.3:+964889 | MS.gene95863:CDS |
| TGCCATTGAATGCAGGAGAT+TGG | 0.436671 | 4.3:+965373 | MS.gene95863:CDS |
| GCTGGTTCCCCGTCCGTCAT+TGG | 0.437439 | 4.3:-966121 | None:intergenic |
| GACTCTAAAGGTTGAGACTT+TGG | 0.437729 | 4.3:-966031 | None:intergenic |
| CAGATATGTTCCAGTTAAGT+TGG | 0.438153 | 4.3:+968685 | MS.gene95863:CDS |
| ACAATCTGGTCGATAGCTTC+TGG | 0.438425 | 4.3:+963846 | MS.gene95863:CDS |
| AATATGCTTGCAACTCCCTC+TGG | 0.439832 | 4.3:-965887 | None:intergenic |
| GGTGGGAACAGTCGTAGGCT+TGG | 0.440669 | 4.3:-968217 | None:intergenic |
| ATCCAATCTCCTGCATTCAA+TGG | 0.441331 | 4.3:-965375 | None:intergenic |
| TCCGTCATTGGAACATCATC+TGG | 0.441477 | 4.3:-966109 | None:intergenic |
| GATTAAAGCCGTTGGTGAAA+AGG | 0.442049 | 4.3:-968121 | None:intergenic |
| ATCAGCAATGGCTGTGGATG+AGG | 0.444703 | 4.3:+968835 | MS.gene95863:CDS |
| GATGGCGCCCTACTTGCCTC+AGG | 0.446713 | 4.3:+966693 | MS.gene95863:CDS |
| TGGAAAATACCAACAAGCTA+TGG | 0.449129 | 4.3:+965346 | MS.gene95863:CDS |
| TACACTGATAGTGCTGTTGC+CGG | 0.449237 | 4.3:+967008 | MS.gene95863:CDS |
| GGAACACTTGTGGAGATCTC+TGG | 0.452349 | 4.3:-963869 | None:intergenic |
| TGAGACAAGAACTCAAACTT+TGG | 0.455764 | 4.3:-968168 | None:intergenic |
| CATGGTGCATGTCTAGGTCT+TGG | 0.456191 | 4.3:+966927 | MS.gene95863:CDS |
| TTTGTTAGAATCTCAAAAGT+AGG | 0.456278 | 4.3:-968608 | None:intergenic |
| TTGCCTCAGGGTGGGACTGG+TGG | 0.456946 | 4.3:+966706 | MS.gene95863:CDS |
| CTCACTTGTTATGGCTGTAA+AGG | 0.458815 | 4.3:-966255 | None:intergenic |
| GCCAAATTCAGTGCAACGGC+TGG | 0.460539 | 4.3:+966625 | MS.gene95863:CDS |
| GATGAAGAACTCTGCAATCC+TGG | 0.462319 | 4.3:-968815 | None:intergenic |
| AGCTCTGGGAATTGCTCTTA+CGG | 0.463949 | 4.3:+967222 | MS.gene95863:CDS |
| GAGAGGTTAAACAAAATAAA+GGG | 0.463995 | 4.3:+966190 | MS.gene95863:CDS |
| TCTCTCCAACCTCAACAATC+TGG | 0.466462 | 4.3:+963832 | MS.gene95863:CDS |
| CCATAGAGGTCATTTGCAGC+AGG | 0.467827 | 4.3:+966660 | MS.gene95863:CDS |
| AGGACAGAACTAACCTGCTC+TGG | 0.470545 | 4.3:-967466 | None:intergenic |
| CCCTAGACTGGAAGCAATTG+TGG | 0.471366 | 4.3:+965203 | MS.gene95863:CDS |
| TTAATGAACTTCTCCTGAGC+AGG | 0.471986 | 4.3:-968647 | None:intergenic |
| TCCAGCATGCATTATTGCAT+TGG | 0.472646 | 4.3:-966457 | None:intergenic |
| CCACAATTGCTTCCAGTCTA+GGG | 0.473984 | 4.3:-965203 | None:intergenic |
| GCTGTTGCCGGTGAGGCTGC+TGG | 0.476468 | 4.3:+967020 | MS.gene95863:CDS |
| AAGCTTATGAAATAGATAAG+AGG | 0.477531 | 4.3:-968096 | None:intergenic |
| GGCTTCTCCATCCTTCTCAC+TGG | 0.480813 | 4.3:-968397 | None:intergenic |
| CATTTCTTCCGCCAGCATCA+AGG | 0.480834 | 4.3:-967984 | None:intergenic |
| CTCTGATTTCTTCTCTGTTG+GGG | 0.482784 | 4.3:-968579 | None:intergenic |
| TGACCATAGCCATTGCTATG+AGG | 0.488921 | 4.3:-967768 | None:intergenic |
| GGAGAGAGCGTGAATCTTCA+GGG | 0.489567 | 4.3:-963816 | None:intergenic |
| TGGCAGTTCCCATAGCTTGT+TGG | 0.489815 | 4.3:-965355 | None:intergenic |
| GACTCACTATCCTATGCCCT+TGG | 0.491337 | 4.3:+964860 | MS.gene95863:CDS |
| TGAGCAGATGACTCGAGATC+AGG | 0.492635 | 4.3:+967279 | MS.gene95863:CDS |
| TGGCATGTATGCACTGGCTT+TGG | 0.492933 | 4.3:+967321 | MS.gene95863:CDS |
| TCTACATCAGCTCCAAGTGC+TGG | 0.494421 | 4.3:+968360 | MS.gene95863:CDS |
| CAGGATCCAATATTACGTTA+TGG | 0.496766 | 4.3:+967298 | MS.gene95863:CDS |
| ATGTTTCAGAGGGTTAGCTC+TGG | 0.498173 | 4.3:+967207 | MS.gene95863:intron |
| GTCCCACCCTGAGGCAAGTA+GGG | 0.504577 | 4.3:-966700 | None:intergenic |
| CATCAGCTAAGGCCAAAGCC+AGG | 0.505060 | 4.3:+968280 | MS.gene95863:CDS |
| ACGACGTTGGTCAGCTCAGC+CGG | 0.507655 | 4.3:+963758 | MS.gene95863:CDS |
| CAGCTCAGCCGGTGGCATGT+TGG | 0.508274 | 4.3:+963769 | MS.gene95863:CDS |
| GCAGTTGATGTCGTAGATGC+AGG | 0.509373 | 4.3:-968779 | None:intergenic |
| TCAGCTCCAAGTGCTGGAAA+AGG | 0.509472 | 4.3:+968366 | MS.gene95863:CDS |
| CTTGGAGCTGATGTAGAGTC+AGG | 0.509922 | 4.3:-968354 | None:intergenic |
| TAAGAAAGCTGAGGAACAGA+AGG | 0.510396 | 4.3:+968308 | MS.gene95863:CDS |
| TTTGGCTCTACGGACTCTAA+AGG | 0.511037 | 4.3:-966043 | None:intergenic |
| GTTGAGCAGAGCTACTAATT+GGG | 0.514161 | 4.3:+966603 | MS.gene95863:CDS |
| GTTGAGACTTTGGCAATGAA+AGG | 0.514680 | 4.3:-966021 | None:intergenic |
| GACCATAGCCATTGCTATGA+GGG | 0.517067 | 4.3:-967767 | None:intergenic |
| ATCGACCAGATTGTTGAGGT+TGG | 0.517100 | 4.3:-963837 | None:intergenic |
| ATGATGTTCCAATGACGGAC+GGG | 0.518455 | 4.3:+966113 | MS.gene95863:CDS |
| TTTGATGCCCTCTCCATGGT+TGG | 0.520103 | 4.3:-966782 | None:intergenic |
| TACAATCCACATGTTCGTTA+CGG | 0.520609 | 4.3:+967637 | MS.gene95863:CDS |
| CTGATGTGAGTGATGATGTC+AGG | 0.520902 | 4.3:+967401 | MS.gene95863:CDS |
| TATCAAAGTAGACCCTAGAC+TGG | 0.521922 | 4.3:+965191 | MS.gene95863:CDS |
| AATTGCACCCATCTTGATCA+TGG | 0.523029 | 4.3:-967947 | None:intergenic |
| GTGGATTGTATGATTCTGAT+AGG | 0.523060 | 4.3:-967624 | None:intergenic |
| TTCTTCATCAGCAATGGCTG+TGG | 0.523176 | 4.3:+968829 | MS.gene95863:CDS |
| GGTGGTGCTCTTTATGCCCT+CGG | 0.523440 | 4.3:+966748 | MS.gene95863:CDS |
| TAGAATCTCAAAAGTAGGCT+CGG | 0.523778 | 4.3:-968603 | None:intergenic |
| CGCCCTACTTGCCTCAGGGT+GGG | 0.525021 | 4.3:+966698 | MS.gene95863:CDS |
| GCTGTGGGCATTTCCTGTGC+GGG | 0.525424 | 4.3:+967670 | MS.gene95863:CDS |
| GGTTGGAACAGGCAGTGATA+AGG | 0.525506 | 4.3:+967064 | MS.gene95863:CDS |
| ACTGCTGGCGGGTCAGGACC+AGG | 0.525643 | 4.3:+968797 | MS.gene95863:CDS |
| CAGCATGGCCAACATGCCAC+CGG | 0.526548 | 4.3:-963777 | None:intergenic |
| TTCAGTCATGGCTACGACGT+TGG | 0.527304 | 4.3:+963745 | None:intergenic |
| GAAGCTAGTGATTCGCGTGT+TGG | 0.527917 | 4.3:+967805 | MS.gene95863:CDS |
| AGTCCCACCCTGAGGCAAGT+AGG | 0.529432 | 4.3:-966701 | None:intergenic |
| CAATTCAGGTGTATTGTGGA+TGG | 0.530057 | 4.3:+965326 | MS.gene95863:intron |
| ATTCAACATGGTGCATGTCT+AGG | 0.530327 | 4.3:+966921 | MS.gene95863:CDS |
| TCTTCAATTCAGGTGTATTG+TGG | 0.532154 | 4.3:+965322 | MS.gene95863:intron |
| AGAATCTCAAAAGTAGGCTC+GGG | 0.532463 | 4.3:-968602 | None:intergenic |
| TGACATTTAGAAGAAAAGCT+TGG | 0.532851 | 4.3:-965991 | None:intergenic |
| TGCCGCATTACTTGTATCAA+AGG | 0.534132 | 4.3:+964509 | MS.gene95863:CDS |
| TCGTGCTGCGCAAGCTATCA+CGG | 0.534450 | 4.3:-966813 | None:intergenic |
| CATAGCAATGGCTATGGTCA+TGG | 0.535078 | 4.3:+967771 | MS.gene95863:CDS |
| AGGAGTTTGATCAGCATCAA+AGG | 0.536478 | 4.3:+964481 | MS.gene95863:CDS |
| GATGTTGACAAAACAGCAGT+TGG | 0.538017 | 4.3:-968261 | None:intergenic |
| CGTGAATCTTCAGGGAGATG+TGG | 0.540725 | 4.3:-963808 | None:intergenic |
| GGAAAATACCAACAAGCTAT+GGG | 0.540976 | 4.3:+965347 | MS.gene95863:CDS |
| TCGAATGGTTGAGGAGGTTG+AGG | 0.541370 | 4.3:-968860 | None:intergenic |
| TATCAGTATGGGCCTACTCA+TGG | 0.541724 | 4.3:+967043 | MS.gene95863:CDS |
| TGTTTCAGAGGGTTAGCTCT+GGG | 0.542560 | 4.3:+967208 | MS.gene95863:intron |
| GGCACATTGACAGCAGAAGC+TGG | 0.542844 | 4.3:-966139 | None:intergenic |
| CTTGCGCAGCACGACTGTTG+AGG | 0.543633 | 4.3:+966822 | MS.gene95863:CDS |
| TTACGGAGCAGCTCTTGCTG+TGG | 0.543767 | 4.3:+967654 | MS.gene95863:CDS |
| GAGGCTGCTGGTATCAGTAT+GGG | 0.546660 | 4.3:+967032 | MS.gene95863:CDS |
| TGGGAACTGCCATTGAATGC+AGG | 0.550560 | 4.3:+965366 | MS.gene95863:CDS |
| TGAGGATACCATGATCAAGA+TGG | 0.553339 | 4.3:+967939 | MS.gene95863:CDS |
| ACTAAGACCTGTACCCGCAC+AGG | 0.553691 | 4.3:-967683 | None:intergenic |
| GCCAATGCAATAATGCATGC+TGG | 0.554004 | 4.3:+966456 | MS.gene95863:CDS |
| TACGGAGCAGCTCTTGCTGT+GGG | 0.554446 | 4.3:+967655 | MS.gene95863:CDS |
| GAAATACTTTAACAAGGAGA+CGG | 0.555096 | 4.3:-965805 | None:intergenic |
| GGGACCAGCTCCAAGGGCAT+AGG | 0.559805 | 4.3:-964870 | None:intergenic |
| TGCTGTGGGCATTTCCTGTG+CGG | 0.561269 | 4.3:+967669 | MS.gene95863:CDS |
| ACTCAGAATGCTGGTGTGAG+TGG | 0.561477 | 4.3:+966085 | MS.gene95863:CDS |
| AGGAAAGTCTTCCAGTGAGA+AGG | 0.561790 | 4.3:+968386 | MS.gene95863:CDS |
| AAGTCTTCCAGTGAGAAGGA+TGG | 0.561796 | 4.3:+968390 | MS.gene95863:CDS |
| TTCCCTCAGGAAAGTATCCA+CGG | 0.561912 | 4.3:-966484 | None:intergenic |
| GCAGAGTTCTTCATCAGCAA+TGG | 0.561955 | 4.3:+968823 | MS.gene95863:CDS |
| ATCTCTAGGAACTGCTGATG+AGG | 0.563533 | 4.3:+966956 | MS.gene95863:CDS |
| TGCCCTCATAGCAATGGCTA+TGG | 0.563797 | 4.3:+967765 | MS.gene95863:CDS |
| GAGGTCATTTGCAGCAGGGA+AGG | 0.563886 | 4.3:+966665 | MS.gene95863:CDS |
| TGAGAGTTTGTACGAAGATG+AGG | 0.564498 | 4.3:+964461 | MS.gene95863:CDS |
| GAAGGATGGAGAAGCCATGC+AGG | 0.566051 | 4.3:+968404 | MS.gene95863:CDS |
| CTACGACATCAACTGCTGGC+GGG | 0.566474 | 4.3:+968786 | MS.gene95863:CDS |
| ATTGTTTGATGCCCTCTCCA+TGG | 0.568153 | 4.3:-966786 | None:intergenic |
| TTCTGCTGTCAATGTGCCTG+AGG | 0.568847 | 4.3:+966144 | MS.gene95863:CDS |
| GCAAGAACTTCAGGCTCAGT+AGG | 0.571786 | 4.3:-968743 | None:intergenic |
| ATACATAAGGGGAACACTTG+TGG | 0.572276 | 4.3:-963879 | None:intergenic |
| AAACAGGGGACCAGCTCCAA+GGG | 0.572325 | 4.3:-964876 | None:intergenic |
| ATTGTATGATTCTGATAGGA+GGG | 0.573007 | 4.3:-967620 | None:intergenic |
| ACTTAAGATGTGTACTCGAA+TGG | 0.573319 | 4.3:-968875 | None:intergenic |
| TTTCACTGTTGAAGTAGTGG+TGG | 0.574051 | 4.3:-968235 | None:intergenic |
| GCATCTACGACATCAACTGC+TGG | 0.574200 | 4.3:+968782 | MS.gene95863:CDS |
| ACTGATACCAGCAGCCTCAC+CGG | 0.575307 | 4.3:-967027 | None:intergenic |
| GGTCTTGGATTGGCATCTCT+AGG | 0.577061 | 4.3:+966942 | MS.gene95863:CDS |
| TTCAGACCGATTAAAGCCGT+TGG | 0.577561 | 4.3:-968129 | None:intergenic |
| GGACTTGGTGTTATCCATAG+AGG | 0.578245 | 4.3:+966646 | MS.gene95863:CDS |
| GCGCCCTACTTGCCTCAGGG+TGG | 0.578270 | 4.3:+966697 | MS.gene95863:CDS |
| TCCGGAATCCTTGATGCTGG+CGG | 0.580078 | 4.3:+967976 | MS.gene95863:CDS |
| ATGGCGCCCTACTTGCCTCA+GGG | 0.581130 | 4.3:+966694 | MS.gene95863:CDS |
| TCTAACAAATCCAGCAAGAG+TGG | 0.582580 | 4.3:+968622 | MS.gene95863:CDS |
| GCTGTACTCTGATCCAGAGC+AGG | 0.584183 | 4.3:+967453 | MS.gene95863:CDS |
| ATTCATGCCAACCATGGAGA+GGG | 0.584575 | 4.3:+966775 | MS.gene95863:CDS |
| TTCACTGTTGAAGTAGTGGT+GGG | 0.585150 | 4.3:-968234 | None:intergenic |
| TGGGAACAGTCGTAGGCTTG+GGG | 0.585173 | 4.3:-968215 | None:intergenic |
| GATAAAGTTACTGCAGTGGT+TGG | 0.586930 | 4.3:+968039 | MS.gene95863:CDS |
| GTGAATCTTCAGGGAGATGT+GGG | 0.588767 | 4.3:-963807 | None:intergenic |
| GAGGATACCATGATCAAGAT+GGG | 0.589552 | 4.3:+967940 | MS.gene95863:CDS |
| AGTATGGGCCTACTCATGGT+TGG | 0.589770 | 4.3:+967047 | MS.gene95863:CDS |
| TGAGTAGAATCTGCATCACT+GGG | 0.589801 | 4.3:-966067 | None:intergenic |
| AAGTTTCACTGTTGAAGTAG+TGG | 0.590303 | 4.3:-968238 | None:intergenic |
| GATGTGTACTCGAATGGTTG+AGG | 0.593404 | 4.3:-968869 | None:intergenic |
| ATGCTCAGATAATCTGGTGA+AGG | 0.593508 | 4.3:-965836 | None:intergenic |
| AGCTTATGAAATAGATAAGA+GGG | 0.594563 | 4.3:-968095 | None:intergenic |
| CAGGAGATTGGATAAACTTG+AGG | 0.594774 | 4.3:+965385 | MS.gene95863:CDS |
| TCAACAACATCCGAAGTCAA+AGG | 0.594848 | 4.3:-967727 | None:intergenic |
| CATAGAGGTCATTTGCAGCA+GGG | 0.597007 | 4.3:+966661 | MS.gene95863:CDS |
| TGGTATCCTCATGCTTGTCA+AGG | 0.598137 | 4.3:-967927 | None:intergenic |
| ATCAGCTAAGGCCAAAGCCA+GGG | 0.602026 | 4.3:+968281 | MS.gene95863:CDS |
| GGTCTTCAAAATAAGGAGGT+CGG | 0.604928 | 4.3:-966379 | None:intergenic |
| ACAGCACAAACCCTAATGCT+AGG | 0.605035 | 4.3:-967435 | None:intergenic |
| TGCATGTCTAGGTCTTGGAT+TGG | 0.605817 | 4.3:+966932 | MS.gene95863:CDS |
| AAAGTGAAGTAATTGACGAA+TGG | 0.609715 | 4.3:-967371 | None:intergenic |
| GCAGATTCTACTCAGAATGC+TGG | 0.609773 | 4.3:+966076 | MS.gene95863:CDS |
| CAGGGCTAGTAAGAAAGCTG+AGG | 0.614232 | 4.3:+968299 | MS.gene95863:CDS |
| CAAACAGGGGACCAGCTCCA+AGG | 0.614560 | 4.3:-964877 | None:intergenic |
| TGATGTTCCAATGACGGACG+GGG | 0.615778 | 4.3:+966114 | MS.gene95863:CDS |
| AGCTATCGACCAGATTGTTG+AGG | 0.617954 | 4.3:-963841 | None:intergenic |
| TTAAGAAGCACAAACCCTGA+AGG | 0.618792 | 4.3:-968710 | None:intergenic |
| TGATAGTGCTGTTGCCGGTG+AGG | 0.619271 | 4.3:+967013 | MS.gene95863:CDS |
| GAAGACCATAAAGCAGTCTG+TGG | 0.620130 | 4.3:+966395 | MS.gene95863:CDS |
| ACCAGATGATGTTCCAATGA+CGG | 0.620385 | 4.3:+966108 | MS.gene95863:CDS |
| GCAGCAGGGAAGGTCACTGA+TGG | 0.621007 | 4.3:+966675 | MS.gene95863:CDS |
| TCAGGGTGCCCTCATAGCAA+TGG | 0.622547 | 4.3:+967759 | MS.gene95863:CDS |
| TTGGGCCAAATTCAGTGCAA+CGG | 0.622608 | 4.3:+966621 | MS.gene95863:CDS |
| GGTGGTAGTCCATACTCAGA+AGG | 0.623238 | 4.3:+966727 | MS.gene95863:CDS |
| TATGTTCTTGGATGAGCCAG+AGG | 0.626390 | 4.3:+965871 | MS.gene95863:CDS |
| GATCCAATATTACGTTATGG+TGG | 0.627085 | 4.3:+967301 | MS.gene95863:CDS |
| TCTACGACATCAACTGCTGG+CGG | 0.628294 | 4.3:+968785 | MS.gene95863:CDS |
| GGTCTGATTCATGCCAACCA+TGG | 0.628696 | 4.3:+966769 | MS.gene95863:CDS |
| GATAGGAGGGAAACAATTCG+AGG | 0.629557 | 4.3:-967607 | None:intergenic |
| GATGATGTTCCAATGACGGA+CGG | 0.631033 | 4.3:+966112 | MS.gene95863:CDS |
| TATGGCCAGGTCATTCAACA+TGG | 0.632302 | 4.3:+966909 | MS.gene95863:intron |
| GATGTGGGACTCGTGCAGCA+TGG | 0.634411 | 4.3:-963792 | None:intergenic |
| GGTTTACGGAAGAGAAGAAG+AGG | 0.635138 | 4.3:+967243 | MS.gene95863:CDS |
| AACCGTGGATACTTTCCTGA+GGG | 0.636227 | 4.3:+966482 | MS.gene95863:CDS |
| AGAGTGATTACATACATAAG+GGG | 0.636567 | 4.3:-963890 | None:intergenic |
| ACAAGAAGTGACAATGTGCA+AGG | 0.637151 | 4.3:+965416 | MS.gene95863:CDS |
| GATTCATGCCAACCATGGAG+AGG | 0.637281 | 4.3:+966774 | MS.gene95863:CDS |
| TTATGGTCTTCAAAATAAGG+AGG | 0.637784 | 4.3:-966383 | None:intergenic |
| ATGTTCTTGGATGAGCCAGA+GGG | 0.637862 | 4.3:+965872 | MS.gene95863:CDS |
| GTAGTGGTGGGAACAGTCGT+AGG | 0.638941 | 4.3:-968222 | None:intergenic |
| GCATGATAAAGTTACTGCAG+TGG | 0.640321 | 4.3:+968035 | MS.gene95863:CDS |
| GTTGGCATGAATCAGACCGA+GGG | 0.641472 | 4.3:-966764 | None:intergenic |
| TTATGGTGGCATGTATGCAC+TGG | 0.648795 | 4.3:+967315 | MS.gene95863:CDS |
| GCCAGCATCAAGGATTCCGG+AGG | 0.649554 | 4.3:-967974 | None:intergenic |
| GAATCTTAGAGAATACAGAC+AGG | 0.652688 | 4.3:+965478 | MS.gene95863:CDS |
| GCTGCTCCGTAACGAACATG+TGG | 0.655887 | 4.3:-967643 | None:intergenic |
| ATCCTGTGAAACATCAAACA+GGG | 0.656841 | 4.3:-964891 | None:intergenic |
| GGTAGTCCATACTCAGAAGG+TGG | 0.657262 | 4.3:+966730 | MS.gene95863:CDS |
| AATTATCCTTGACAAGCATG+AGG | 0.660003 | 4.3:+967921 | MS.gene95863:CDS |
| GATTGTATGATTCTGATAGG+AGG | 0.661847 | 4.3:-967621 | None:intergenic |
| TGCCTGTTCCAACCATGAGT+AGG | 0.663707 | 4.3:-967055 | None:intergenic |
| TGCGGGTACAGGTCTTAGTG+AGG | 0.666367 | 4.3:+967687 | MS.gene95863:CDS |
| GCACTGGCTTTGGCGTATAG+CGG | 0.666930 | 4.3:+967331 | MS.gene95863:CDS |
| TAATGTATGCATTACCTGCA+TGG | 0.667865 | 4.3:-968418 | None:intergenic |
| AATGCATGCTGGAACAACCG+TGG | 0.668717 | 4.3:+966467 | MS.gene95863:CDS |
| TACCTTTGATACAAGTAATG+CGG | 0.671026 | 4.3:-964511 | None:intergenic |
| ACGTTGGTCAGCTCAGCCGG+TGG | 0.681112 | 4.3:+963761 | MS.gene95863:CDS |
| GGTTGGCATGAATCAGACCG+AGG | 0.688601 | 4.3:-966765 | None:intergenic |
| TCTTAGAGAATACAGACAGG+AGG | 0.696091 | 4.3:+965481 | MS.gene95863:CDS |
| TTACGGAAGAGAAGAAGAGG+CGG | 0.701441 | 4.3:+967246 | MS.gene95863:CDS |
| CAACCGTGGATACTTTCCTG+AGG | 0.701995 | 4.3:+966481 | MS.gene95863:CDS |
| CCACCACCAGTCCCACCCTG+AGG | 0.702255 | 4.3:-966709 | None:intergenic |
| GTGTACTCGAATGGTTGAGG+AGG | 0.711248 | 4.3:-968866 | None:intergenic |
| TCCTGTGAAACATCAAACAG+GGG | 0.711450 | 4.3:-964890 | None:intergenic |
| TGCTGCGCAAGCTATCACGG+AGG | 0.731636 | 4.3:-966810 | None:intergenic |
| ATGTGAGTGATGATGTCAGG+AGG | 0.740753 | 4.3:+967404 | MS.gene95863:CDS |
| GTATTCTCTAAGATTCACAA+AGG | 0.747713 | 4.3:-965471 | None:intergenic |
| TGATGATGTCAGGAGGACTG+CGG | 0.772419 | 4.3:+967411 | MS.gene95863:CDS |
| TGGCATAAATGGTAGCACTG+TGG | 0.777224 | 4.3:-966437 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACACAAAAAAAAAAAAAAAA+GGG | - | chr4.3:967525-967544 | None:intergenic | 10.0% |
| !! | TAAAATCATAAAAATTTCAA+TGG | - | chr4.3:965614-965633 | None:intergenic | 10.0% |
| !! | CACAAAAAAAAAAAAAAAAG+GGG | - | chr4.3:967524-967543 | None:intergenic | 15.0% |
| !! | CACACAAAAAAAAAAAAAAA+AGG | - | chr4.3:967526-967545 | None:intergenic | 15.0% |
| !! | CATCTAAGAATAATAATATA+TGG | - | chr4.3:964752-964771 | None:intergenic | 15.0% |
| !!! | CTTTTTTTTTTTTTTTTGTG+TGG | + | chr4.3:967524-967543 | MS.gene95863:intron | 15.0% |
| !!! | TTATAAAGAATTTTTAACAG+CGG | + | chr4.3:965733-965752 | MS.gene95863:intron | 15.0% |
| !!! | TTTTGTTCCTTTAAAATTTT+AGG | + | chr4.3:966576-966595 | MS.gene95863:intron | 15.0% |
| !! | AATGAAAAGTCTTAATGATT+TGG | - | chr4.3:964308-964327 | None:intergenic | 20.0% |
| !! | ACGAAAAAATTATAAGGTAA+AGG | + | chr4.3:967123-967142 | MS.gene95863:intron | 20.0% |
| !! | AGAGGAAATATAAAAAGAAA+AGG | - | chr4.3:967489-967508 | None:intergenic | 20.0% |
| !! | ATATTATTATTCTTAGATGC+TGG | + | chr4.3:964753-964772 | MS.gene95863:intron | 20.0% |
| !! | TAAAATTAAAGGGATGAAAA+GGG | - | chr4.3:965575-965594 | None:intergenic | 20.0% |
| !! | TAATAAAAGACCTAAGATAA+AGG | - | chr4.3:964824-964843 | None:intergenic | 20.0% |
| !! | TTAGATCATCATTTATTTGT+TGG | + | chr4.3:966303-966322 | MS.gene95863:intron | 20.0% |
| !!! | AACCAATCCTAAAATTTTAA+AGG | - | chr4.3:966586-966605 | None:intergenic | 20.0% |
| !!! | AGATAACAAATAAGTATTGT+CGG | + | chr4.3:964660-964679 | MS.gene95863:intron | 20.0% |
| !!! | CCTTTAAAACAATAAAGTTT+CGG | - | chr4.3:968553-968572 | None:intergenic | 20.0% |
| !!! | GTTTTTTAGTGTTAATTTGT+TGG | + | chr4.3:964382-964401 | MS.gene95863:intron | 20.0% |
| !!! | TAAGATTTTATAAATTGTCG+TGG | - | chr4.3:965110-965129 | None:intergenic | 20.0% |
| !!! | TATATCTAATGTGTTGTTTA+TGG | + | chr4.3:966891-966910 | MS.gene95863:intron | 20.0% |
| !!! | TTCCTTTAAAATTTTAGGAT+TGG | + | chr4.3:966581-966600 | MS.gene95863:intron | 20.0% |
| ! | AAAAAAAAAAAGGGGTAACT+CGG | - | chr4.3:967516-967535 | None:intergenic | 25.0% |
| ! | AAAGAGTGATTACATACATA+AGG | - | chr4.3:963895-963914 | None:intergenic | 25.0% |
| ! | AAGAGTGATTACATACATAA+GGG | - | chr4.3:963894-963913 | None:intergenic | 25.0% |
| ! | AAGCTTATGAAATAGATAAG+AGG | - | chr4.3:968099-968118 | None:intergenic | 25.0% |
| ! | AGCTCAATGACTAAAATTAA+AGG | - | chr4.3:965586-965605 | None:intergenic | 25.0% |
| ! | AGCTTATGAAATAGATAAGA+GGG | - | chr4.3:968098-968117 | None:intergenic | 25.0% |
| ! | CACAACACGAAAAAATTATA+AGG | + | chr4.3:967117-967136 | MS.gene95863:CDS | 25.0% |
| ! | CTAAAATTAAAGGGATGAAA+AGG | - | chr4.3:965576-965595 | None:intergenic | 25.0% |
| ! | GAGAGGTTAAACAAAATAAA+GGG | + | chr4.3:966190-966209 | MS.gene95863:CDS | 25.0% |
| ! | GCTCAATGACTAAAATTAAA+GGG | - | chr4.3:965585-965604 | None:intergenic | 25.0% |
| ! | TACTATGATCTCTATGAAAA+TGG | + | chr4.3:965001-965020 | MS.gene95863:intron | 25.0% |
| ! | TATCATGTTTCTTTCTTACT+TGG | + | chr4.3:964351-964370 | MS.gene95863:intron | 25.0% |
| ! | TCTTATCTATTTCATAAGCT+TGG | + | chr4.3:968098-968117 | MS.gene95863:CDS | 25.0% |
| ! | TGAGAGGTTAAACAAAATAA+AGG | + | chr4.3:966189-966208 | MS.gene95863:CDS | 25.0% |
| ! | TGATATCAACAAGTGAAAAA+AGG | - | chr4.3:964336-964355 | None:intergenic | 25.0% |
| ! | TTTGAAAGCTTCTGAATTAA+GGG | + | chr4.3:964274-964293 | MS.gene95863:intron | 25.0% |
| ! | TTTGTTAGAATCTCAAAAGT+AGG | - | chr4.3:968611-968630 | None:intergenic | 25.0% |
| !! | AAAATAAAGGGAATTTTGTC+TGG | + | chr4.3:966202-966221 | MS.gene95863:CDS | 25.0% |
| !! | AAATCTTATGTTTTCAGCTA+AGG | + | chr4.3:965122-965141 | MS.gene95863:intron | 25.0% |
| !! | ATCATTTATTTGTTGGTACT+TGG | + | chr4.3:966310-966329 | MS.gene95863:intron | 25.0% |
| !! | ATCTTAGGTCTTTTATTACT+TGG | + | chr4.3:964826-964845 | MS.gene95863:intron | 25.0% |
| !! | CATCTTTTAAACATCTCTTT+TGG | + | chr4.3:965636-965655 | MS.gene95863:intron | 25.0% |
| !! | GAAGTTCATTAAATTTTTGC+AGG | + | chr4.3:968658-968677 | MS.gene95863:CDS | 25.0% |
| !! | GGTAAGGAAAGTATATTATT+TGG | + | chr4.3:967836-967855 | MS.gene95863:intron | 25.0% |
| !! | TCTTAGGTCTTTTATTACTT+GGG | + | chr4.3:964827-964846 | MS.gene95863:intron | 25.0% |
| !!! | ACTTCAAATAGCTTTTGATT+TGG | + | chr4.3:965955-965974 | MS.gene95863:CDS | 25.0% |
| !!! | ATTGATAATATTGGTTCAGT+TGG | + | chr4.3:965029-965048 | MS.gene95863:intron | 25.0% |
| !!! | ATTGTTTCTAAATGTTTCAG+AGG | + | chr4.3:967196-967215 | MS.gene95863:intron | 25.0% |
| !!! | CCGAAACTTTATTGTTTTAA+AGG | + | chr4.3:968550-968569 | MS.gene95863:intron | 25.0% |
| !!! | GCTTTTGAAATACTTTAACA+AGG | - | chr4.3:965814-965833 | None:intergenic | 25.0% |
| !!! | TGCTTGTTTTTTTTTTGTTC+AGG | + | chr4.3:965778-965797 | MS.gene95863:intron | 25.0% |
| !!! | TTCTTTGATTTCATGCTTTT+CGG | + | chr4.3:963923-963942 | MS.gene95863:intron | 25.0% |
| !!! | TTGTTTCTAAATGTTTCAGA+GGG | + | chr4.3:967197-967216 | MS.gene95863:intron | 25.0% |
| !!! | TTTTGAAAGCTTCTGAATTA+AGG | + | chr4.3:964273-964292 | MS.gene95863:intron | 25.0% |
| AAAAAAAAAAGGGGTAACTC+GGG | - | chr4.3:967515-967534 | None:intergenic | 30.0% | |
| AAAACCTATGTTGTCAATAG+TGG | - | chr4.3:964257-964276 | None:intergenic | 30.0% | |
| AAAGTGAAGTAATTGACGAA+TGG | - | chr4.3:967374-967393 | None:intergenic | 30.0% | |
| AATATACTTTCCTTACCTGA+AGG | - | chr4.3:967833-967852 | None:intergenic | 30.0% | |
| AGAGTGATTACATACATAAG+GGG | - | chr4.3:963893-963912 | None:intergenic | 30.0% | |
| AGATTTGAGAGTCCTATTAA+CGG | - | chr4.3:965668-965687 | None:intergenic | 30.0% | |
| ATGAAAAAACTTAAGTCCTC+CGG | - | chr4.3:964727-964746 | None:intergenic | 30.0% | |
| ATTGTATGATTCTGATAGGA+GGG | - | chr4.3:967623-967642 | None:intergenic | 30.0% | |
| CAACGAAAATTGAGAATTGA+GGG | - | chr4.3:965298-965317 | None:intergenic | 30.0% | |
| GAAATACTTTAACAAGGAGA+CGG | - | chr4.3:965808-965827 | None:intergenic | 30.0% | |
| GCTTTATGGTCTTCAAAATA+AGG | - | chr4.3:966389-966408 | None:intergenic | 30.0% | |
| GTTCAAATTCTACTACACAA+TGG | - | chr4.3:964126-964145 | None:intergenic | 30.0% | |
| TACCTTTGATACAAGTAATG+CGG | - | chr4.3:964514-964533 | None:intergenic | 30.0% | |
| TGACATTTAGAAGAAAAGCT+TGG | - | chr4.3:965994-966013 | None:intergenic | 30.0% | |
| TTATGGTCTTCAAAATAAGG+AGG | - | chr4.3:966386-966405 | None:intergenic | 30.0% | |
| TTGAAAGCTTCTGAATTAAG+GGG | + | chr4.3:964275-964294 | MS.gene95863:intron | 30.0% | |
| TTTCTTCACTCCTTTATCTT+AGG | + | chr4.3:964811-964830 | MS.gene95863:intron | 30.0% | |
| ! | AAACAAAGATGATGCTCTTT+TGG | + | chr4.3:965931-965950 | MS.gene95863:CDS | 30.0% |
| ! | AGCAATAGTCTTTTCTTTGA+CGG | - | chr4.3:966872-966891 | None:intergenic | 30.0% |
| ! | AGTCTTAGAAAGTAGTCTTA+TGG | - | chr4.3:968013-968032 | None:intergenic | 30.0% |
| ! | ATATGCTAGTTTCAAGTCTA+AGG | + | chr4.3:965155-965174 | MS.gene95863:CDS | 30.0% |
| ! | ATGGACTGCATTGATAATAT+TGG | + | chr4.3:965020-965039 | MS.gene95863:intron | 30.0% |
| ! | CATTATTGCATTGGCATAAA+TGG | - | chr4.3:966451-966470 | None:intergenic | 30.0% |
| ! | GTTGGAATGAGAATGTTTTT+GGG | + | chr4.3:964400-964419 | MS.gene95863:intron | 30.0% |
| ! | TAAAGAATTTTTAACAGCGG+TGG | + | chr4.3:965736-965755 | MS.gene95863:intron | 30.0% |
| ! | TGTTGGAATGAGAATGTTTT+TGG | + | chr4.3:964399-964418 | MS.gene95863:intron | 30.0% |
| !! | ATGTTGGTTCTTATACTGTT+TGG | + | chr4.3:966337-966356 | MS.gene95863:intron | 30.0% |
| !! | GAGTTTATTTTCAATCGTGT+AGG | + | chr4.3:964046-964065 | MS.gene95863:intron | 30.0% |
| !! | GTATTCTCTAAGATTCACAA+AGG | - | chr4.3:965474-965493 | None:intergenic | 30.0% |
| !! | TAGTACAAAGTGTTGTCAAT+TGG | + | chr4.3:964175-964194 | MS.gene95863:intron | 30.0% |
| !! | TTGGAATGAGAATGTTTTTG+GGG | + | chr4.3:964401-964420 | MS.gene95863:intron | 30.0% |
| !! | TTTTCAGCCAATTTTGGTAT+TGG | + | chr4.3:968070-968089 | MS.gene95863:CDS | 30.0% |
| !!! | TCAGCATACATTTTTTCACT+TGG | - | chr4.3:966172-966191 | None:intergenic | 30.0% |
| AAGTTTCACTGTTGAAGTAG+TGG | - | chr4.3:968241-968260 | None:intergenic | 35.0% | |
| AATCCTGTGAAACATCAAAC+AGG | - | chr4.3:964895-964914 | None:intergenic | 35.0% | |
| AATTATCCTTGACAAGCATG+AGG | + | chr4.3:967921-967940 | MS.gene95863:CDS | 35.0% | |
| AATTCTCACCTAGAAGAGTA+TGG | - | chr4.3:964928-964947 | None:intergenic | 35.0% | |
| AGAGGGAGAAAACAAAACTA+TGG | - | chr4.3:966529-966548 | None:intergenic | 35.0% | |
| AGGAACAAAAACCTCAAGAA+TGG | - | chr4.3:966566-966585 | None:intergenic | 35.0% | |
| ATCCTGTGAAACATCAAACA+GGG | - | chr4.3:964894-964913 | None:intergenic | 35.0% | |
| ATGCCACCATAACGTAATAT+TGG | - | chr4.3:967307-967326 | None:intergenic | 35.0% | |
| ATTAAAGGGATGAAAAGGGA+AGG | - | chr4.3:965571-965590 | None:intergenic | 35.0% | |
| ATTGAGGGAACTCAAAGTTA+AGG | - | chr4.3:965283-965302 | None:intergenic | 35.0% | |
| CAAATTCTACTACACAATGG+TGG | - | chr4.3:964123-964142 | None:intergenic | 35.0% | |
| CAATCCACTATTGACAACAT+AGG | + | chr4.3:964250-964269 | MS.gene95863:intron | 35.0% | |
| CAGATATGTTCCAGTTAAGT+TGG | + | chr4.3:968685-968704 | MS.gene95863:CDS | 35.0% | |
| CAGGATCCAATATTACGTTA+TGG | + | chr4.3:967298-967317 | MS.gene95863:CDS | 35.0% | |
| CTCAAGAATGGGAAATTACA+GGG | - | chr4.3:966554-966573 | None:intergenic | 35.0% | |
| GAATCTTAGAGAATACAGAC+AGG | + | chr4.3:965478-965497 | MS.gene95863:CDS | 35.0% | |
| GAGGGAGAAAACAAAACTAT+GGG | - | chr4.3:966528-966547 | None:intergenic | 35.0% | |
| GATCCAATATTACGTTATGG+TGG | + | chr4.3:967301-967320 | MS.gene95863:CDS | 35.0% | |
| GATTGTATGATTCTGATAGG+AGG | - | chr4.3:967624-967643 | None:intergenic | 35.0% | |
| GCAACGAAAATTGAGAATTG+AGG | - | chr4.3:965299-965318 | None:intergenic | 35.0% | |
| GGAAAATACCAACAAGCTAT+GGG | + | chr4.3:965347-965366 | MS.gene95863:CDS | 35.0% | |
| GGAACAAAAACCTCAAGAAT+GGG | - | chr4.3:966565-966584 | None:intergenic | 35.0% | |
| GTCTATACGCAGAATATATC+CGG | + | chr4.3:965536-965555 | MS.gene95863:intron | 35.0% | |
| GTGAAAAAATGTATGCTGAG+AGG | + | chr4.3:966173-966192 | MS.gene95863:CDS | 35.0% | |
| TAATGTATGCATTACCTGCA+TGG | - | chr4.3:968421-968440 | None:intergenic | 35.0% | |
| TACAATCCACATGTTCGTTA+CGG | + | chr4.3:967637-967656 | MS.gene95863:CDS | 35.0% | |
| TACTTTCCTGAGGGAAAATT+TGG | + | chr4.3:966491-966510 | MS.gene95863:CDS | 35.0% | |
| TAGAATCTCAAAAGTAGGCT+CGG | - | chr4.3:968606-968625 | None:intergenic | 35.0% | |
| TCAGTAATAGCAAGAACTTC+AGG | - | chr4.3:968755-968774 | None:intergenic | 35.0% | |
| TCGTTGCATTTCTTCAATTC+AGG | + | chr4.3:965312-965331 | MS.gene95863:intron | 35.0% | |
| TCTTCAATTCAGGTGTATTG+TGG | + | chr4.3:965322-965341 | MS.gene95863:intron | 35.0% | |
| TGACAAATGCTCAGATAATC+TGG | - | chr4.3:965845-965864 | None:intergenic | 35.0% | |
| TGAGACAAGAACTCAAACTT+TGG | - | chr4.3:968171-968190 | None:intergenic | 35.0% | |
| TGGAAAATACCAACAAGCTA+TGG | + | chr4.3:965346-965365 | MS.gene95863:CDS | 35.0% | |
| TTAAAGGGATGAAAAGGGAA+GGG | - | chr4.3:965570-965589 | None:intergenic | 35.0% | |
| TTGTCAGTGTCTTATGTTCT+TGG | + | chr4.3:965859-965878 | MS.gene95863:CDS | 35.0% | |
| ! | GCAATAGTCTTTTCTTTGAC+GGG | - | chr4.3:966871-966890 | None:intergenic | 35.0% |
| ! | GTGGATTGTATGATTCTGAT+AGG | - | chr4.3:967627-967646 | None:intergenic | 35.0% |
| ! | TGTTTTGTCAACATCAGCTA+AGG | + | chr4.3:968269-968288 | MS.gene95863:CDS | 35.0% |
| ! | TTGCAGTTTTCAGCCAATTT+TGG | + | chr4.3:968064-968083 | MS.gene95863:CDS | 35.0% |
| ! | TTGGGGTATTCAAAAAGTGA+AGG | - | chr4.3:968201-968220 | None:intergenic | 35.0% |
| !! | CAATAGTGGATTGCAGAAAA+TGG | - | chr4.3:964243-964262 | None:intergenic | 35.0% |
| !! | TAAGGTAAAGGTGTTTCACT+CGG | + | chr4.3:967135-967154 | MS.gene95863:intron | 35.0% |
| !! | TACAAAGTGTTGTCAATTGG+CGG | + | chr4.3:964178-964197 | MS.gene95863:intron | 35.0% |
| !! | TCATCCTTTTTGATTGTACC+CGG | + | chr4.3:964686-964705 | MS.gene95863:intron | 35.0% |
| !! | TTTTCACCAACGGCTTTAAT+CGG | + | chr4.3:968123-968142 | MS.gene95863:CDS | 35.0% |
| !!! | ATTTTTTCACTTGGATCCTC+AGG | - | chr4.3:966163-966182 | None:intergenic | 35.0% |
| !!! | GTTGTTGATTTTGTTCGTCA+GGG | + | chr4.3:967742-967761 | MS.gene95863:CDS | 35.0% |
| !!! | TGTTGTTGATTTTGTTCGTC+AGG | + | chr4.3:967741-967760 | MS.gene95863:CDS | 35.0% |
| !!! | TTTTGGTGTTGACCGTTAAT+AGG | + | chr4.3:965653-965672 | MS.gene95863:intron | 35.0% |
| AATGAGACAAATGTTTGCGC+TGG | + | chr4.3:965704-965723 | MS.gene95863:intron | 40.0% | |
| AATTGCACCCATCTTGATCA+TGG | - | chr4.3:967950-967969 | None:intergenic | 40.0% | |
| ACAAGAAGTGACAATGTGCA+AGG | + | chr4.3:965416-965435 | MS.gene95863:CDS | 40.0% | |
| ACCAGATGATGTTCCAATGA+CGG | + | chr4.3:966108-966127 | MS.gene95863:CDS | 40.0% | |
| AGAATACAGACAGGAGGTAA+GGG | + | chr4.3:965487-965506 | MS.gene95863:intron | 40.0% | |
| AGAATCTCAAAAGTAGGCTC+GGG | - | chr4.3:968605-968624 | None:intergenic | 40.0% | |
| AGGAGTTTGATCAGCATCAA+AGG | + | chr4.3:964481-964500 | MS.gene95863:CDS | 40.0% | |
| ATACATAAGGGGAACACTTG+TGG | - | chr4.3:963882-963901 | None:intergenic | 40.0% | |
| ATCCAATCTCCTGCATTCAA+TGG | - | chr4.3:965378-965397 | None:intergenic | 40.0% | |
| ATGCTCAGATAATCTGGTGA+AGG | - | chr4.3:965839-965858 | None:intergenic | 40.0% | |
| ATGGGAAATTACAGGGAAAG+AGG | - | chr4.3:966547-966566 | None:intergenic | 40.0% | |
| ATTCAACATGGTGCATGTCT+AGG | + | chr4.3:966921-966940 | MS.gene95863:CDS | 40.0% | |
| CAATTCAGGTGTATTGTGGA+TGG | + | chr4.3:965326-965345 | MS.gene95863:intron | 40.0% | |
| CAGGAGATTGGATAAACTTG+AGG | + | chr4.3:965385-965404 | MS.gene95863:CDS | 40.0% | |
| CCTCAAGAATGGGAAATTAC+AGG | - | chr4.3:966555-966574 | None:intergenic | 40.0% | |
| CCTGTAATTTCCCATTCTTG+AGG | + | chr4.3:966552-966571 | MS.gene95863:intron | 40.0% | |
| CTCTGATTTCTTCTCTGTTG+GGG | - | chr4.3:968582-968601 | None:intergenic | 40.0% | |
| GACTATGTCCATACTCTTCT+AGG | + | chr4.3:964917-964936 | MS.gene95863:CDS | 40.0% | |
| GAGGATACCATGATCAAGAT+GGG | + | chr4.3:967940-967959 | MS.gene95863:CDS | 40.0% | |
| GATGTTGACAAAACAGCAGT+TGG | - | chr4.3:968264-968283 | None:intergenic | 40.0% | |
| GCTCTGATTTCTTCTCTGTT+GGG | - | chr4.3:968583-968602 | None:intergenic | 40.0% | |
| GGAATTGCTCTTACGGTTTA+CGG | + | chr4.3:967229-967248 | MS.gene95863:CDS | 40.0% | |
| GGTCTTCAAAATAAGGAGGT+CGG | - | chr4.3:966382-966401 | None:intergenic | 40.0% | |
| GTTGAGACTTTGGCAATGAA+AGG | - | chr4.3:966024-966043 | None:intergenic | 40.0% | |
| GTTGAGCAGAGCTACTAATT+GGG | + | chr4.3:966603-966622 | MS.gene95863:CDS | 40.0% | |
| TAAGAAAGCTGAGGAACAGA+AGG | + | chr4.3:968308-968327 | MS.gene95863:CDS | 40.0% | |
| TAGCGGAACAGCAAACAATA+AGG | + | chr4.3:967348-967367 | MS.gene95863:CDS | 40.0% | |
| TATCAAAGTAGACCCTAGAC+TGG | + | chr4.3:965191-965210 | MS.gene95863:CDS | 40.0% | |
| TCAACAACATCCGAAGTCAA+AGG | - | chr4.3:967730-967749 | None:intergenic | 40.0% | |
| TCCAGCATGCATTATTGCAT+TGG | - | chr4.3:966460-966479 | None:intergenic | 40.0% | |
| TCCTGTGAAACATCAAACAG+GGG | - | chr4.3:964893-964912 | None:intergenic | 40.0% | |
| TCTAACAAATCCAGCAAGAG+TGG | + | chr4.3:968622-968641 | MS.gene95863:CDS | 40.0% | |
| TCTTAGAGAATACAGACAGG+AGG | + | chr4.3:965481-965500 | MS.gene95863:CDS | 40.0% | |
| TGAGAGTTTGTACGAAGATG+AGG | + | chr4.3:964461-964480 | MS.gene95863:CDS | 40.0% | |
| TGAGGATACCATGATCAAGA+TGG | + | chr4.3:967939-967958 | MS.gene95863:CDS | 40.0% | |
| TGAGTAGAATCTGCATCACT+GGG | - | chr4.3:966070-966089 | None:intergenic | 40.0% | |
| TGCCGCATTACTTGTATCAA+AGG | + | chr4.3:964509-964528 | MS.gene95863:CDS | 40.0% | |
| TGGGAAATTACAGGGAAAGA+GGG | - | chr4.3:966546-966565 | None:intergenic | 40.0% | |
| TTAATGAACTTCTCCTGAGC+AGG | - | chr4.3:968650-968669 | None:intergenic | 40.0% | |
| TTCACTGTTGAAGTAGTGGT+GGG | - | chr4.3:968237-968256 | None:intergenic | 40.0% | |
| TTTCACTGTTGAAGTAGTGG+TGG | - | chr4.3:968238-968257 | None:intergenic | 40.0% | |
| ! | AAAGGGAAGGGAAGATTTTC+CGG | - | chr4.3:965558-965577 | None:intergenic | 40.0% |
| ! | AACTCACCAAATTTTCCCTC+AGG | - | chr4.3:966500-966519 | None:intergenic | 40.0% |
| ! | AATTTTCTCCAATTGTCGCC+TGG | - | chr4.3:967905-967924 | None:intergenic | 40.0% |
| ! | GACTCTAAAGGTTGAGACTT+TGG | - | chr4.3:966034-966053 | None:intergenic | 40.0% |
| ! | GATCAAGATGGGTGCAATTT+TGG | + | chr4.3:967951-967970 | MS.gene95863:CDS | 40.0% |
| ! | GATTAAAGCCGTTGGTGAAA+AGG | - | chr4.3:968124-968143 | None:intergenic | 40.0% |
| ! | GGAAACAGTCTCACTTGTTA+TGG | - | chr4.3:966267-966286 | None:intergenic | 40.0% |
| ! | GTTGGTACTTGGTAGTATGT+TGG | + | chr4.3:966321-966340 | MS.gene95863:intron | 40.0% |
| ! | TTAAGAAGCACAAACCCTGA+AGG | - | chr4.3:968713-968732 | None:intergenic | 40.0% |
| !! | CAGTTGGTGTTACTTGTTAG+TGG | + | chr4.3:965045-965064 | MS.gene95863:intron | 40.0% |
| !! | CTAATGTGTTGTTTATGGCC+AGG | + | chr4.3:966896-966915 | MS.gene95863:intron | 40.0% |
| !! | CTCACTTGTTATGGCTGTAA+AGG | - | chr4.3:966258-966277 | None:intergenic | 40.0% |
| !! | GAGGGTACCAATACCAAAAT+TGG | - | chr4.3:968080-968099 | None:intergenic | 40.0% |
| !!! | CGATGCTGTTTTTGCACATA+CGG | + | chr4.3:964584-964603 | MS.gene95863:intron | 40.0% |
| AACCGTGGATACTTTCCTGA+GGG | + | chr4.3:966482-966501 | MS.gene95863:CDS | 45.0% | |
| AACTTAAGTCCTCCGGTGAT+TGG | - | chr4.3:964720-964739 | None:intergenic | 45.0% | |
| AAGTCTTCCAGTGAGAAGGA+TGG | + | chr4.3:968390-968409 | MS.gene95863:CDS | 45.0% | |
| AATATGCTTGCAACTCCCTC+TGG | - | chr4.3:965890-965909 | None:intergenic | 45.0% | |
| ACAATCTGGTCGATAGCTTC+TGG | + | chr4.3:963846-963865 | MS.gene95863:CDS | 45.0% | |
| ACAGCACAAACCCTAATGCT+AGG | - | chr4.3:967438-967457 | None:intergenic | 45.0% | |
| AGAGGGAGTTGCAAGCATAT+TGG | + | chr4.3:965889-965908 | MS.gene95863:CDS | 45.0% | |
| AGATGCTGGATTTCGTCTCA+TGG | + | chr4.3:964767-964786 | MS.gene95863:intron | 45.0% | |
| AGCTATCGACCAGATTGTTG+AGG | - | chr4.3:963844-963863 | None:intergenic | 45.0% | |
| AGGAAAGTCTTCCAGTGAGA+AGG | + | chr4.3:968386-968405 | MS.gene95863:CDS | 45.0% | |
| ATCGACCAGATTGTTGAGGT+TGG | - | chr4.3:963840-963859 | None:intergenic | 45.0% | |
| ATGCACCATGTTGAATGACC+TGG | - | chr4.3:966917-966936 | None:intergenic | 45.0% | |
| ATGTTCTTGGATGAGCCAGA+GGG | + | chr4.3:965872-965891 | MS.gene95863:CDS | 45.0% | |
| ATTCATGCCAACCATGGAGA+GGG | + | chr4.3:966775-966794 | MS.gene95863:CDS | 45.0% | |
| ATTGTTTGATGCCCTCTCCA+TGG | - | chr4.3:966789-966808 | None:intergenic | 45.0% | |
| CAAAGGCTCCAGCAAAGATA+TGG | - | chr4.3:967713-967732 | None:intergenic | 45.0% | |
| CATAGAGGTCATTTGCAGCA+GGG | + | chr4.3:966661-966680 | MS.gene95863:CDS | 45.0% | |
| CATAGCAATGGCTATGGTCA+TGG | + | chr4.3:967771-967790 | MS.gene95863:CDS | 45.0% | |
| CATCTCCACAGACTGCTTTA+TGG | - | chr4.3:966403-966422 | None:intergenic | 45.0% | |
| CCACAATTGCTTCCAGTCTA+GGG | - | chr4.3:965206-965225 | None:intergenic | 45.0% | |
| CTGAGTAGAATCTGCATCAC+TGG | - | chr4.3:966071-966090 | None:intergenic | 45.0% | |
| GAAGACCATAAAGCAGTCTG+TGG | + | chr4.3:966395-966414 | MS.gene95863:CDS | 45.0% | |
| GAAGCCGGGTACAATCAAAA+AGG | - | chr4.3:964693-964712 | None:intergenic | 45.0% | |
| GACCATAGCCATTGCTATGA+GGG | - | chr4.3:967770-967789 | None:intergenic | 45.0% | |
| GAGAATACAGACAGGAGGTA+AGG | + | chr4.3:965486-965505 | MS.gene95863:intron | 45.0% | |
| GATAGGAGGGAAACAATTCG+AGG | - | chr4.3:967610-967629 | None:intergenic | 45.0% | |
| GATGAAGAACTCTGCAATCC+TGG | - | chr4.3:968818-968837 | None:intergenic | 45.0% | |
| GATGTGTACTCGAATGGTTG+AGG | - | chr4.3:968872-968891 | None:intergenic | 45.0% | |
| GCAGAGTTCTTCATCAGCAA+TGG | + | chr4.3:968823-968842 | MS.gene95863:CDS | 45.0% | |
| GCAGATTCTACTCAGAATGC+TGG | + | chr4.3:966076-966095 | MS.gene95863:CDS | 45.0% | |
| GCCAATGCAATAATGCATGC+TGG | + | chr4.3:966456-966475 | MS.gene95863:CDS | 45.0% | |
| GGTTGAGCAGAGCTACTAAT+TGG | + | chr4.3:966602-966621 | MS.gene95863:CDS | 45.0% | |
| GGTTTACGGAAGAGAAGAAG+AGG | + | chr4.3:967243-967262 | MS.gene95863:CDS | 45.0% | |
| GTGAATCTTCAGGGAGATGT+GGG | - | chr4.3:963810-963829 | None:intergenic | 45.0% | |
| TAGTGAGGCCATATCTTTGC+TGG | + | chr4.3:967702-967721 | MS.gene95863:CDS | 45.0% | |
| TATCAGTATGGGCCTACTCA+TGG | + | chr4.3:967043-967062 | MS.gene95863:CDS | 45.0% | |
| TATGGCCAGGTCATTCAACA+TGG | + | chr4.3:966909-966928 | MS.gene95863:intron | 45.0% | |
| TATGTTCTTGGATGAGCCAG+AGG | + | chr4.3:965871-965890 | MS.gene95863:CDS | 45.0% | |
| TCCACAATTGCTTCCAGTCT+AGG | - | chr4.3:965207-965226 | None:intergenic | 45.0% | |
| TCCCCTGTTTGATGTTTCAC+AGG | + | chr4.3:964889-964908 | MS.gene95863:CDS | 45.0% | |
| TCCGTCATTGGAACATCATC+TGG | - | chr4.3:966112-966131 | None:intergenic | 45.0% | |
| TCTCTCCAACCTCAACAATC+TGG | + | chr4.3:963832-963851 | MS.gene95863:CDS | 45.0% | |
| TGACCATAGCCATTGCTATG+AGG | - | chr4.3:967771-967790 | None:intergenic | 45.0% | |
| TGCATGTCTAGGTCTTGGAT+TGG | + | chr4.3:966932-966951 | MS.gene95863:CDS | 45.0% | |
| TGCCATTGAATGCAGGAGAT+TGG | + | chr4.3:965373-965392 | MS.gene95863:CDS | 45.0% | |
| TGGCATAAATGGTAGCACTG+TGG | - | chr4.3:966440-966459 | None:intergenic | 45.0% | |
| TGGTATCCTCATGCTTGTCA+AGG | - | chr4.3:967930-967949 | None:intergenic | 45.0% | |
| TTACGGAAGAGAAGAAGAGG+CGG | + | chr4.3:967246-967265 | MS.gene95863:CDS | 45.0% | |
| TTATGGTGGCATGTATGCAC+TGG | + | chr4.3:967315-967334 | MS.gene95863:CDS | 45.0% | |
| TTCAGACCGATTAAAGCCGT+TGG | - | chr4.3:968132-968151 | None:intergenic | 45.0% | |
| TTCTGACATGCGTGTATTCC+AGG | + | chr4.3:967884-967903 | MS.gene95863:intron | 45.0% | |
| TTCTTCATCAGCAATGGCTG+TGG | + | chr4.3:968829-968848 | MS.gene95863:CDS | 45.0% | |
| TTGGGCCAAATTCAGTGCAA+CGG | + | chr4.3:966621-966640 | MS.gene95863:CDS | 45.0% | |
| TTTCTTACTAGCCCTGGCTT+TGG | - | chr4.3:968295-968314 | None:intergenic | 45.0% | |
| ! | ATCTCTAGGAACTGCTGATG+AGG | + | chr4.3:966956-966975 | MS.gene95863:CDS | 45.0% |
| ! | ATGTGAGTGATGATGTCAGG+AGG | + | chr4.3:967404-967423 | MS.gene95863:CDS | 45.0% |
| ! | CTGATGTGAGTGATGATGTC+AGG | + | chr4.3:967401-967420 | MS.gene95863:CDS | 45.0% |
| ! | GAATCTGCATCACTGGGTTT+TGG | - | chr4.3:966064-966083 | None:intergenic | 45.0% |
| ! | GACTTTCCTTTTCCAGCACT+TGG | - | chr4.3:968375-968394 | None:intergenic | 45.0% |
| ! | GATGATGTTCCAATGACGGA+CGG | + | chr4.3:966112-966131 | MS.gene95863:CDS | 45.0% |
| ! | GGCTCTGATTTCTTCTCTGT+TGG | - | chr4.3:968584-968603 | None:intergenic | 45.0% |
| ! | TACACTGATAGTGCTGTTGC+CGG | + | chr4.3:967008-967027 | MS.gene95863:CDS | 45.0% |
| ! | TGTGTGGCTGTAGTCTGTTT+TGG | + | chr4.3:967540-967559 | MS.gene95863:intron | 45.0% |
| ! | TTTGCTGGAGCCTTTGACTT+CGG | + | chr4.3:967717-967736 | MS.gene95863:CDS | 45.0% |
| !! | AAGCTTGGCCTTTTCACCAA+CGG | + | chr4.3:968113-968132 | MS.gene95863:CDS | 45.0% |
| !! | AGCTCTGGGAATTGCTCTTA+CGG | + | chr4.3:967222-967241 | MS.gene95863:CDS | 45.0% |
| !! | ATGATGTTCCAATGACGGAC+GGG | + | chr4.3:966113-966132 | MS.gene95863:CDS | 45.0% |
| !! | ATGTTTCAGAGGGTTAGCTC+TGG | + | chr4.3:967207-967226 | MS.gene95863:intron | 45.0% |
| !! | CAGTTAAGTTGGCACCTTCA+GGG | + | chr4.3:968696-968715 | MS.gene95863:CDS | 45.0% |
| !! | GGACTTGGTGTTATCCATAG+AGG | + | chr4.3:966646-966665 | MS.gene95863:CDS | 45.0% |
| !! | TACTGCTACTGACTCACGAT+AGG | + | chr4.3:964147-964166 | MS.gene95863:intron | 45.0% |
| !! | TGTTTCAGAGGGTTAGCTCT+GGG | + | chr4.3:967208-967227 | MS.gene95863:intron | 45.0% |
| !! | TTCCCTCAGGAAAGTATCCA+CGG | - | chr4.3:966487-966506 | None:intergenic | 45.0% |
| !! | TTTGGCTCTACGGACTCTAA+AGG | - | chr4.3:966046-966065 | None:intergenic | 45.0% |
| !!! | ATCACTGGGTTTTGGCTCTA+CGG | - | chr4.3:966056-966075 | None:intergenic | 45.0% |
| !! | TCTAATAAAATATTATTAAA+AGG | - | chr4.3:966288-966307 | None:intergenic | 5.0% |
| AATGCATGCTGGAACAACCG+TGG | + | chr4.3:966467-966486 | MS.gene95863:CDS | 50.0% | |
| ACTCAGAATGCTGGTGTGAG+TGG | + | chr4.3:966085-966104 | MS.gene95863:CDS | 50.0% | |
| AGGACAGAACTAACCTGCTC+TGG | - | chr4.3:967469-967488 | None:intergenic | 50.0% | |
| AGTATGGGCCTACTCATGGT+TGG | + | chr4.3:967047-967066 | MS.gene95863:CDS | 50.0% | |
| ATCAGCAATGGCTGTGGATG+AGG | + | chr4.3:968835-968854 | MS.gene95863:CDS | 50.0% | |
| ATCAGCTAAGGCCAAAGCCA+GGG | + | chr4.3:968281-968300 | MS.gene95863:CDS | 50.0% | |
| ATTCGAGGAGTCTGCAGTGT+AGG | - | chr4.3:967595-967614 | None:intergenic | 50.0% | |
| ATTCGCGTGTTGGAACCTTC+AGG | + | chr4.3:967815-967834 | MS.gene95863:CDS | 50.0% | |
| CAACCGTGGATACTTTCCTG+AGG | + | chr4.3:966481-966500 | MS.gene95863:CDS | 50.0% | |
| CATGGTGCATGTCTAGGTCT+TGG | + | chr4.3:966927-966946 | MS.gene95863:CDS | 50.0% | |
| CATTTCTTCCGCCAGCATCA+AGG | - | chr4.3:967987-968006 | None:intergenic | 50.0% | |
| CCAGAGAAGCCGTGGTTTAA+CGG | - | chr4.3:967165-967184 | None:intergenic | 50.0% | |
| CCATAGAGGTCATTTGCAGC+AGG | + | chr4.3:966660-966679 | MS.gene95863:CDS | 50.0% | |
| CCCTAGACTGGAAGCAATTG+TGG | + | chr4.3:965203-965222 | MS.gene95863:CDS | 50.0% | |
| CCGGCTTCTAAACCAATCAC+CGG | + | chr4.3:964705-964724 | MS.gene95863:intron | 50.0% | |
| CCTGCTGCAAATGACCTCTA+TGG | - | chr4.3:966663-966682 | None:intergenic | 50.0% | |
| CGTGAATCTTCAGGGAGATG+TGG | - | chr4.3:963811-963830 | None:intergenic | 50.0% | |
| CGTGTATTCCAGGCGACAAT+TGG | + | chr4.3:967894-967913 | MS.gene95863:intron | 50.0% | |
| CGTGTTGGAACCTTCAGGTA+AGG | + | chr4.3:967820-967839 | MS.gene95863:intron | 50.0% | |
| CTCAGCTTTCTTACTAGCCC+TGG | - | chr4.3:968301-968320 | None:intergenic | 50.0% | |
| CTCGGCAATCCGTTAAACCA+CGG | + | chr4.3:967153-967172 | MS.gene95863:intron | 50.0% | |
| CTTGGAGCTGATGTAGAGTC+AGG | - | chr4.3:968357-968376 | None:intergenic | 50.0% | |
| GAAGCTAGTGATTCGCGTGT+TGG | + | chr4.3:967805-967824 | MS.gene95863:CDS | 50.0% | |
| GACTCACTATCCTATGCCCT+TGG | + | chr4.3:964860-964879 | MS.gene95863:CDS | 50.0% | |
| GAGGCTGCTGGTATCAGTAT+GGG | + | chr4.3:967032-967051 | MS.gene95863:CDS | 50.0% | |
| GATTCATGCCAACCATGGAG+AGG | + | chr4.3:966774-966793 | MS.gene95863:CDS | 50.0% | |
| GCAAGAACTTCAGGCTCAGT+AGG | - | chr4.3:968746-968765 | None:intergenic | 50.0% | |
| GCATCTACGACATCAACTGC+TGG | + | chr4.3:968782-968801 | MS.gene95863:CDS | 50.0% | |
| GCTTCTAAACCAATCACCGG+AGG | + | chr4.3:964708-964727 | MS.gene95863:intron | 50.0% | |
| GGAACACTTGTGGAGATCTC+TGG | - | chr4.3:963872-963891 | None:intergenic | 50.0% | |
| GGTAGTCCATACTCAGAAGG+TGG | + | chr4.3:966730-966749 | MS.gene95863:CDS | 50.0% | |
| GGTCTGATTCATGCCAACCA+TGG | + | chr4.3:966769-966788 | MS.gene95863:CDS | 50.0% | |
| GGTGGTAGTCCATACTCAGA+AGG | + | chr4.3:966727-966746 | MS.gene95863:CDS | 50.0% | |
| GGTTGGAACAGGCAGTGATA+AGG | + | chr4.3:967064-967083 | MS.gene95863:CDS | 50.0% | |
| GTGTACTCGAATGGTTGAGG+AGG | - | chr4.3:968869-968888 | None:intergenic | 50.0% | |
| GTTGGCATGAATCAGACCGA+GGG | - | chr4.3:966767-966786 | None:intergenic | 50.0% | |
| TCCAGCCGTTGCACTGAATT+TGG | - | chr4.3:966629-966648 | None:intergenic | 50.0% | |
| TCGAATGGTTGAGGAGGTTG+AGG | - | chr4.3:968863-968882 | None:intergenic | 50.0% | |
| TCTACATCAGCTCCAAGTGC+TGG | + | chr4.3:968360-968379 | MS.gene95863:CDS | 50.0% | |
| TCTACGACATCAACTGCTGG+CGG | + | chr4.3:968785-968804 | MS.gene95863:CDS | 50.0% | |
| TGAGCAGATGACTCGAGATC+AGG | + | chr4.3:967279-967298 | MS.gene95863:CDS | 50.0% | |
| TGAGGCTGCTGGTATCAGTA+TGG | + | chr4.3:967031-967050 | MS.gene95863:CDS | 50.0% | |
| TGCCCTCATAGCAATGGCTA+TGG | + | chr4.3:967765-967784 | MS.gene95863:CDS | 50.0% | |
| TGCCTGTTCCAACCATGAGT+AGG | - | chr4.3:967058-967077 | None:intergenic | 50.0% | |
| TGGGAACTGCCATTGAATGC+AGG | + | chr4.3:965366-965385 | MS.gene95863:CDS | 50.0% | |
| TTCTGCTGTCAATGTGCCTG+AGG | + | chr4.3:966144-966163 | MS.gene95863:CDS | 50.0% | |
| TTTGATGCCCTCTCCATGGT+TGG | - | chr4.3:966785-966804 | None:intergenic | 50.0% | |
| ! | AGAGCACCACCTTCTGAGTA+TGG | - | chr4.3:966739-966758 | None:intergenic | 50.0% |
| ! | CAGGGCTAGTAAGAAAGCTG+AGG | + | chr4.3:968299-968318 | MS.gene95863:CDS | 50.0% |
| ! | GCAGTTGATGTCGTAGATGC+AGG | - | chr4.3:968782-968801 | None:intergenic | 50.0% |
| ! | GGAGAGAGCGTGAATCTTCA+GGG | - | chr4.3:963819-963838 | None:intergenic | 50.0% |
| ! | TGATGATGTCAGGAGGACTG+CGG | + | chr4.3:967411-967430 | MS.gene95863:CDS | 50.0% |
| ! | TGGAGAGAGCGTGAATCTTC+AGG | - | chr4.3:963820-963839 | None:intergenic | 50.0% |
| ! | TGGCAGTTCCCATAGCTTGT+TGG | - | chr4.3:965358-965377 | None:intergenic | 50.0% |
| !! | ATGGGTGCAATTTTGGCCTC+CGG | + | chr4.3:967958-967977 | MS.gene95863:CDS | 50.0% |
| !! | CCAGTTAAGTTGGCACCTTC+AGG | + | chr4.3:968695-968714 | MS.gene95863:CDS | 50.0% |
| !! | CCGGTGATTGGTTTAGAAGC+CGG | - | chr4.3:964708-964727 | None:intergenic | 50.0% |
| !! | CCTGAAGGTGCCAACTTAAC+TGG | - | chr4.3:968698-968717 | None:intergenic | 50.0% |
| !! | CGGTGATTGGTTTAGAAGCC+GGG | - | chr4.3:964707-964726 | None:intergenic | 50.0% |
| !! | GGTCTTGGATTGGCATCTCT+AGG | + | chr4.3:966942-966961 | MS.gene95863:CDS | 50.0% |
| !! | TCAGCTCCAAGTGCTGGAAA+AGG | + | chr4.3:968366-968385 | MS.gene95863:CDS | 50.0% |
| !! | TGATGTTCCAATGACGGACG+GGG | + | chr4.3:966114-966133 | MS.gene95863:CDS | 50.0% |
| !! | TGGCATGTATGCACTGGCTT+TGG | + | chr4.3:967321-967340 | MS.gene95863:CDS | 50.0% |
| AAACAGGGGACCAGCTCCAA+GGG | - | chr4.3:964879-964898 | None:intergenic | 55.0% | |
| AAGGGGTAACTCGGGACAAG+AGG | - | chr4.3:967507-967526 | None:intergenic | 55.0% | |
| ACTAAGACCTGTACCCGCAC+AGG | - | chr4.3:967686-967705 | None:intergenic | 55.0% | |
| ACTGATACCAGCAGCCTCAC+CGG | - | chr4.3:967030-967049 | None:intergenic | 55.0% | |
| AGCAAGAGTGGTTCCTGCTC+AGG | + | chr4.3:968634-968653 | MS.gene95863:CDS | 55.0% | |
| AGGACTGCGGTCCTAGCATT+AGG | + | chr4.3:967424-967443 | MS.gene95863:CDS | 55.0% | |
| CATCAGCTAAGGCCAAAGCC+AGG | + | chr4.3:968280-968299 | MS.gene95863:CDS | 55.0% | |
| CCGTTAAACCACGGCTTCTC+TGG | + | chr4.3:967162-967181 | MS.gene95863:intron | 55.0% | |
| CTACGACATCAACTGCTGGC+GGG | + | chr4.3:968786-968805 | MS.gene95863:CDS | 55.0% | |
| CTATCCTATGCCCTTGGAGC+TGG | + | chr4.3:964866-964885 | MS.gene95863:CDS | 55.0% | |
| GAAGGATGGAGAAGCCATGC+AGG | + | chr4.3:968404-968423 | MS.gene95863:CDS | 55.0% | |
| GAGGTCATTTGCAGCAGGGA+AGG | + | chr4.3:966665-966684 | MS.gene95863:CDS | 55.0% | |
| GCCAAATTCAGTGCAACGGC+TGG | + | chr4.3:966625-966644 | MS.gene95863:CDS | 55.0% | |
| GCTGCTCCGTAACGAACATG+TGG | - | chr4.3:967646-967665 | None:intergenic | 55.0% | |
| GCTGTACTCTGATCCAGAGC+AGG | + | chr4.3:967453-967472 | MS.gene95863:CDS | 55.0% | |
| GGACTGCGGTCCTAGCATTA+GGG | + | chr4.3:967425-967444 | MS.gene95863:CDS | 55.0% | |
| GGCACATTGACAGCAGAAGC+TGG | - | chr4.3:966142-966161 | None:intergenic | 55.0% | |
| GGCCTACTCATGGTTGGAAC+AGG | + | chr4.3:967053-967072 | MS.gene95863:CDS | 55.0% | |
| GGCTTCTCCATCCTTCTCAC+TGG | - | chr4.3:968400-968419 | None:intergenic | 55.0% | |
| GGTGGTGCTCTTTATGCCCT+CGG | + | chr4.3:966748-966767 | MS.gene95863:CDS | 55.0% | |
| GGTTGGCATGAATCAGACCG+AGG | - | chr4.3:966768-966787 | None:intergenic | 55.0% | |
| GTGGGAACAGTCGTAGGCTT+GGG | - | chr4.3:968219-968238 | None:intergenic | 55.0% | |
| TATCAGAGCCAGAGAAGCCG+TGG | - | chr4.3:967173-967192 | None:intergenic | 55.0% | |
| TCCGCCAGCATCAAGGATTC+CGG | - | chr4.3:967980-967999 | None:intergenic | 55.0% | |
| TCCGGAATCCTTGATGCTGG+CGG | + | chr4.3:967976-967995 | MS.gene95863:CDS | 55.0% | |
| TCGTGCTGCGCAAGCTATCA+CGG | - | chr4.3:966816-966835 | None:intergenic | 55.0% | |
| TGAGCAGGAACCACTCTTGC+TGG | - | chr4.3:968635-968654 | None:intergenic | 55.0% | |
| TGCGGGTACAGGTCTTAGTG+AGG | + | chr4.3:967687-967706 | MS.gene95863:CDS | 55.0% | |
| TGCTGTGGGCATTTCCTGTG+CGG | + | chr4.3:967669-967688 | MS.gene95863:CDS | 55.0% | |
| TGGGAACAGTCGTAGGCTTG+GGG | - | chr4.3:968218-968237 | None:intergenic | 55.0% | |
| TTACGGAGCAGCTCTTGCTG+TGG | + | chr4.3:967654-967673 | MS.gene95863:CDS | 55.0% | |
| TTCAGTGCAACGGCTGGACT+TGG | + | chr4.3:966631-966650 | MS.gene95863:CDS | 55.0% | |
| ! | GTAGTGGTGGGAACAGTCGT+AGG | - | chr4.3:968225-968244 | None:intergenic | 55.0% |
| ! | TACGGAGCAGCTCTTGCTGT+GGG | + | chr4.3:967655-967674 | MS.gene95863:CDS | 55.0% |
| ! | TCAGGGTGCCCTCATAGCAA+TGG | + | chr4.3:967759-967778 | MS.gene95863:CDS | 55.0% |
| ! | TGATAGTGCTGTTGCCGGTG+AGG | + | chr4.3:967013-967032 | MS.gene95863:CDS | 55.0% |
| !! | GCACTGGCTTTGGCGTATAG+CGG | + | chr4.3:967331-967350 | MS.gene95863:CDS | 55.0% |
| ACGACGTTGGTCAGCTCAGC+CGG | + | chr4.3:963758-963777 | MS.gene95863:CDS | 60.0% | |
| AGTCCCACCCTGAGGCAAGT+AGG | - | chr4.3:966704-966723 | None:intergenic | 60.0% | |
| ATGGCGCCCTACTTGCCTCA+GGG | + | chr4.3:966694-966713 | MS.gene95863:CDS | 60.0% | |
| CAAACAGGGGACCAGCTCCA+AGG | - | chr4.3:964880-964899 | None:intergenic | 60.0% | |
| CAGCATGGCCAACATGCCAC+CGG | - | chr4.3:963780-963799 | None:intergenic | 60.0% | |
| CTTGCGCAGCACGACTGTTG+AGG | + | chr4.3:966822-966841 | MS.gene95863:CDS | 60.0% | |
| GATGTGGGACTCGTGCAGCA+TGG | - | chr4.3:963795-963814 | None:intergenic | 60.0% | |
| GCAGCAGGGAAGGTCACTGA+TGG | + | chr4.3:966675-966694 | MS.gene95863:CDS | 60.0% | |
| GCCAGCATCAAGGATTCCGG+AGG | - | chr4.3:967977-967996 | None:intergenic | 60.0% | |
| GCCTCCGGAATCCTTGATGC+TGG | + | chr4.3:967973-967992 | MS.gene95863:CDS | 60.0% | |
| GCTGTGGGCATTTCCTGTGC+GGG | + | chr4.3:967670-967689 | MS.gene95863:CDS | 60.0% | |
| GGCATTTCCTGTGCGGGTAC+AGG | + | chr4.3:967676-967695 | MS.gene95863:CDS | 60.0% | |
| GGTGGGAACAGTCGTAGGCT+TGG | - | chr4.3:968220-968239 | None:intergenic | 60.0% | |
| GTCCCACCCTGAGGCAAGTA+GGG | - | chr4.3:966703-966722 | None:intergenic | 60.0% | |
| TACTTGCCTCAGGGTGGGAC+TGG | + | chr4.3:966703-966722 | MS.gene95863:CDS | 60.0% | |
| TGCTGCGCAAGCTATCACGG+AGG | - | chr4.3:966813-966832 | None:intergenic | 60.0% | |
| ! | ACATCAACTGCTGGCGGGTC+AGG | + | chr4.3:968791-968810 | MS.gene95863:CDS | 60.0% |
| ACGTTGGTCAGCTCAGCCGG+TGG | + | chr4.3:963761-963780 | MS.gene95863:CDS | 65.0% | |
| CAGCTCAGCCGGTGGCATGT+TGG | + | chr4.3:963769-963788 | MS.gene95863:CDS | 65.0% | |
| CGCCCTACTTGCCTCAGGGT+GGG | + | chr4.3:966698-966717 | MS.gene95863:CDS | 65.0% | |
| GATGGCGCCCTACTTGCCTC+AGG | + | chr4.3:966693-966712 | MS.gene95863:CDS | 65.0% | |
| TTGCCTCAGGGTGGGACTGG+TGG | + | chr4.3:966706-966725 | MS.gene95863:CDS | 65.0% | |
| ! | GCTGGTTCCCCGTCCGTCAT+TGG | - | chr4.3:966124-966143 | None:intergenic | 65.0% |
| ! | GGGACCAGCTCCAAGGGCAT+AGG | - | chr4.3:964873-964892 | None:intergenic | 65.0% |
| CCACCACCAGTCCCACCCTG+AGG | - | chr4.3:966712-966731 | None:intergenic | 70.0% | |
| GCGCCCTACTTGCCTCAGGG+TGG | + | chr4.3:966697-966716 | MS.gene95863:CDS | 70.0% | |
| GCTGTTGCCGGTGAGGCTGC+TGG | + | chr4.3:967020-967039 | MS.gene95863:CDS | 70.0% | |
| ! | ACTGCTGGCGGGTCAGGACC+AGG | + | chr4.3:968797-968816 | MS.gene95863:CDS | 70.0% |
| ! | CCTCAGGGTGGGACTGGTGG+TGG | + | chr4.3:966709-966728 | MS.gene95863:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 963752 | 968895 | 963752 | ID=MS.gene95863 |
| chr4.3 | mRNA | 963752 | 968895 | 963752 | ID=MS.gene95863.t1;Parent=MS.gene95863 |
| chr4.3 | exon | 963752 | 963897 | 963752 | ID=MS.gene95863.t1.exon1;Parent=MS.gene95863.t1 |
| chr4.3 | CDS | 963752 | 963897 | 963752 | ID=cds.MS.gene95863.t1;Parent=MS.gene95863.t1 |
| chr4.3 | exon | 964461 | 964530 | 964461 | ID=MS.gene95863.t1.exon2;Parent=MS.gene95863.t1 |
| chr4.3 | CDS | 964461 | 964530 | 964461 | ID=cds.MS.gene95863.t1;Parent=MS.gene95863.t1 |
| chr4.3 | exon | 964833 | 964938 | 964833 | ID=MS.gene95863.t1.exon3;Parent=MS.gene95863.t1 |
| chr4.3 | CDS | 964833 | 964938 | 964833 | ID=cds.MS.gene95863.t1;Parent=MS.gene95863.t1 |
| chr4.3 | exon | 965139 | 965241 | 965139 | ID=MS.gene95863.t1.exon4;Parent=MS.gene95863.t1 |
| chr4.3 | CDS | 965139 | 965241 | 965139 | ID=cds.MS.gene95863.t1;Parent=MS.gene95863.t1 |
| chr4.3 | exon | 965334 | 965502 | 965334 | ID=MS.gene95863.t1.exon5;Parent=MS.gene95863.t1 |
| chr4.3 | CDS | 965334 | 965502 | 965334 | ID=cds.MS.gene95863.t1;Parent=MS.gene95863.t1 |
| chr4.3 | exon | 965800 | 966272 | 965800 | ID=MS.gene95863.t1.exon6;Parent=MS.gene95863.t1 |
| chr4.3 | CDS | 965800 | 966272 | 965800 | ID=cds.MS.gene95863.t1;Parent=MS.gene95863.t1 |
| chr4.3 | exon | 966377 | 966512 | 966377 | ID=MS.gene95863.t1.exon7;Parent=MS.gene95863.t1 |
| chr4.3 | CDS | 966377 | 966512 | 966377 | ID=cds.MS.gene95863.t1;Parent=MS.gene95863.t1 |
| chr4.3 | exon | 966598 | 966843 | 966598 | ID=MS.gene95863.t1.exon8;Parent=MS.gene95863.t1 |
| chr4.3 | CDS | 966598 | 966843 | 966598 | ID=cds.MS.gene95863.t1;Parent=MS.gene95863.t1 |
| chr4.3 | exon | 966918 | 967138 | 966918 | ID=MS.gene95863.t1.exon9;Parent=MS.gene95863.t1 |
| chr4.3 | CDS | 966918 | 967138 | 966918 | ID=cds.MS.gene95863.t1;Parent=MS.gene95863.t1 |
| chr4.3 | exon | 967216 | 967474 | 967216 | ID=MS.gene95863.t1.exon10;Parent=MS.gene95863.t1 |
| chr4.3 | CDS | 967216 | 967474 | 967216 | ID=cds.MS.gene95863.t1;Parent=MS.gene95863.t1 |
| chr4.3 | exon | 967604 | 967836 | 967604 | ID=MS.gene95863.t1.exon11;Parent=MS.gene95863.t1 |
| chr4.3 | CDS | 967604 | 967836 | 967604 | ID=cds.MS.gene95863.t1;Parent=MS.gene95863.t1 |
| chr4.3 | exon | 967906 | 968425 | 967906 | ID=MS.gene95863.t1.exon12;Parent=MS.gene95863.t1 |
| chr4.3 | CDS | 967906 | 968425 | 967906 | ID=cds.MS.gene95863.t1;Parent=MS.gene95863.t1 |
| chr4.3 | exon | 968572 | 968895 | 968572 | ID=MS.gene95863.t1.exon13;Parent=MS.gene95863.t1 |
| chr4.3 | CDS | 968572 | 968895 | 968572 | ID=cds.MS.gene95863.t1;Parent=MS.gene95863.t1 |
| Gene Sequence |
| Protein sequence |
