Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015610.t1 | XP_003631011.1 | 98.2 | 965 | 17 | 0 | 1 | 965 | 1 | 965 | 0.00E+00 | 1687.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015610.t1 | O48844 | 83.7 | 970 | 148 | 4 | 1 | 964 | 1 | 966 | 0.0e+00 | 1478.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015610.t1 | G7LCC0 | 98.2 | 965 | 17 | 0 | 1 | 965 | 1 | 965 | 0.0e+00 | 1687.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene20187 | MS.gene015610 | PPI |
MS.gene57118 | MS.gene015610 | PPI |
MS.gene058594 | MS.gene015610 | PPI |
MS.gene048987 | MS.gene015610 | PPI |
MS.gene62646 | MS.gene015610 | PPI |
MS.gene06206 | MS.gene015610 | PPI |
MS.gene95863 | MS.gene015610 | PPI |
MS.gene55853 | MS.gene015610 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015610.t1 | MTR_8g106120 | 99.600 | 1001 | 4 | 0 | 1 | 1001 | 1 | 1001 | 0.0 | 2044 |
MS.gene015610.t1 | MTR_2g067250 | 97.602 | 1001 | 22 | 1 | 1 | 1001 | 1 | 999 | 0.0 | 2006 |
MS.gene015610.t1 | MTR_8g106120 | 99.743 | 779 | 2 | 0 | 223 | 1001 | 1 | 779 | 0.0 | 1589 |
MS.gene015610.t1 | MTR_8g106120 | 99.723 | 721 | 2 | 0 | 1 | 721 | 1 | 721 | 0.0 | 1479 |
MS.gene015610.t1 | MTR_3g009940 | 77.037 | 270 | 15 | 2 | 1 | 270 | 1 | 223 | 3.11e-131 | 400 |
MS.gene015610.t1 | MTR_3g009940 | 77.698 | 139 | 9 | 2 | 694 | 832 | 224 | 340 | 6.76e-62 | 215 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene015610.t1 | AT2G32730 | 84.341 | 1009 | 145 | 9 | 1 | 1001 | 1 | 1004 | 0.0 | 1676 |
MS.gene015610.t1 | AT1G04810 | 81.719 | 1012 | 162 | 8 | 1 | 1001 | 1 | 1000 | 0.0 | 1638 |
Find 269 sgRNAs with CRISPR-Local
Find 403 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACTTTCCTGAGGGAAAATT+TGG | 0.159807 | 4.1:+1192307 | MS.gene015610:CDS |
TCCAGCCGTTGCACTGAATT+TGG | 0.186516 | 4.1:-1192442 | None:intergenic |
CATTATTGCATTGGCATAAA+TGG | 0.189798 | 4.1:-1192264 | None:intergenic |
GAGCAAGATGGGTGCAATTT+TGG | 0.199961 | 4.1:+1193764 | MS.gene015610:CDS |
CCAGTTAAGTTGGCACCTTC+AGG | 0.213525 | 4.1:+1194511 | MS.gene015610:CDS |
CATCTCCACAGACTGCTTTA+TGG | 0.226890 | 4.1:-1192216 | None:intergenic |
TTGTCAGTGTCTTATGTTCT+TGG | 0.227488 | 4.1:+1191675 | MS.gene015610:CDS |
GGTTGAGCAGAGCTACTAAT+TGG | 0.236302 | 4.1:+1192418 | MS.gene015610:CDS |
AAACAAAGATGATGCTCTTT+TGG | 0.252990 | 4.1:+1191747 | MS.gene015610:CDS |
GACTATGTCCATACTCTTCT+AGG | 0.285306 | 4.1:+1190733 | MS.gene015610:CDS |
GGCTCTGATTTCTTCTCTGT+TGG | 0.292922 | 4.1:-1194397 | None:intergenic |
TGGAGAGAGCGTGAATCTTC+AGG | 0.293532 | 4.1:-1189641 | None:intergenic |
GAGGGTACCAATACCAAAAT+TGG | 0.295987 | 4.1:-1193890 | None:intergenic |
GCTTTATGGTCTTCAAAATA+AGG | 0.300890 | 4.1:-1192202 | None:intergenic |
GGAATTGCTCTTACGGTTTA+CGG | 0.306338 | 4.1:+1193045 | MS.gene015610:CDS |
CCTGAAGGTGCCAACTTAAC+TGG | 0.312725 | 4.1:-1194511 | None:intergenic |
GAATCTGCATCACTGGGTTT+TGG | 0.319869 | 4.1:-1191877 | None:intergenic |
AGGACTGCGGTCCTAGCATT+AGG | 0.329300 | 4.1:+1193240 | MS.gene015610:CDS |
TAGTGAGGCCATATCTTTGC+TGG | 0.339539 | 4.1:+1193515 | MS.gene015610:CDS |
TACTTGCCTCAGGGTGGGAC+TGG | 0.339564 | 4.1:+1192519 | MS.gene015610:CDS |
TGAGAGGTTAAACAAAATAA+AGG | 0.344216 | 4.1:+1192005 | MS.gene015610:CDS |
TTTCTTACTAGCCCTGGCTT+TGG | 0.346140 | 4.1:-1194105 | None:intergenic |
ATGCCACCATAACGTAATAT+TGG | 0.348326 | 4.1:-1193120 | None:intergenic |
CCTGCTGCAAATGACCTCTA+TGG | 0.350310 | 4.1:-1192476 | None:intergenic |
GCTCTGATTTCTTCTCTGTT+GGG | 0.354056 | 4.1:-1194396 | None:intergenic |
TGAGCAGGAACCACTCTTGC+TGG | 0.358571 | 4.1:-1194448 | None:intergenic |
TCCACAATTGCTTCCAGTCT+CGG | 0.361735 | 4.1:-1191020 | None:intergenic |
TGAGGCTGCTGGTATCAGTA+TGG | 0.362240 | 4.1:+1192847 | MS.gene015610:CDS |
GTGGGAACAGTCGTAGGCTT+GGG | 0.369188 | 4.1:-1194029 | None:intergenic |
ATATGCTAGTTTCAAGTCTA+AGG | 0.370644 | 4.1:+1190971 | MS.gene015610:CDS |
AGTCTTAGAAAGTAGTCTTA+TGG | 0.371639 | 4.1:-1193823 | None:intergenic |
CTCAGCTTTCTTACTAGCCC+TGG | 0.372570 | 4.1:-1194111 | None:intergenic |
AGAGCACCACCTTCTGAGTA+TGG | 0.376878 | 4.1:-1192552 | None:intergenic |
TCCGCCAGCATCAAGGATTC+CGG | 0.379806 | 4.1:-1193790 | None:intergenic |
CGTGTATTCCAGGCGACAAT+TGG | 0.383184 | 4.1:+1193707 | MS.gene015610:intron |
GGAAACAGTCTCACTTGTTA+TGG | 0.391974 | 4.1:-1192080 | None:intergenic |
CAAAGGCTCCAGCAAAGATA+TGG | 0.396501 | 4.1:-1193523 | None:intergenic |
TTTGCTGGAGCCTTTGACTT+CGG | 0.397652 | 4.1:+1193530 | MS.gene015610:CDS |
TGACAAATGCTCAGATAATC+TGG | 0.399990 | 4.1:-1191658 | None:intergenic |
ATTCGCGTGTTGGAACCTTC+AGG | 0.407002 | 4.1:+1193628 | MS.gene015610:CDS |
GGCATTTCCTGTGCGGGTAC+AGG | 0.408036 | 4.1:+1193489 | MS.gene015610:CDS |
AATTCTCACCTAGAAGAGTA+TGG | 0.416307 | 4.1:-1190741 | None:intergenic |
TAGCGGAACAGCAAACAATA+AGG | 0.416651 | 4.1:+1193164 | MS.gene015610:CDS |
GGACTGCGGTCCTAGCATTA+GGG | 0.417017 | 4.1:+1193241 | MS.gene015610:CDS |
GCCTCCGGAATCCTTGATGC+TGG | 0.420374 | 4.1:+1193786 | MS.gene015610:CDS |
CTGAGTAGAATCTGCATCAC+TGG | 0.422471 | 4.1:-1191884 | None:intergenic |
CCTCAGGGTGGGACTGGTGG+TGG | 0.423831 | 4.1:+1192525 | MS.gene015610:CDS |
AGCAAGAGTGGTTCCTGCTC+AGG | 0.424076 | 4.1:+1194450 | MS.gene015610:CDS |
TTCAGTGCAACGGCTGGACT+TGG | 0.424201 | 4.1:+1192447 | MS.gene015610:CDS |
CAGTTAAGTTGGCACCTTCA+GGG | 0.424877 | 4.1:+1194512 | MS.gene015610:CDS |
TTTGTTAGAATCTCAAAAGT+TGG | 0.425058 | 4.1:-1194424 | None:intergenic |
TCAGTAATAGCAAGAACTTC+AGG | 0.425883 | 4.1:-1194568 | None:intergenic |
CTATCCTATGCCCTTGGAGC+TGG | 0.426899 | 4.1:+1190682 | MS.gene015610:CDS |
AATCCTGTGAAACATCAAAC+AGG | 0.428256 | 4.1:-1190708 | None:intergenic |
TCTTATCTATTTCATAAGCT+TGG | 0.430502 | 4.1:+1193911 | MS.gene015610:CDS |
ACATCAACTGCTGGCGGGTC+AGG | 0.431417 | 4.1:+1194607 | MS.gene015610:CDS |
GGCCTACTCATGGTTGGAAC+AGG | 0.433364 | 4.1:+1192869 | MS.gene015610:CDS |
AGAGGGAGTTGCAAGCATAT+TGG | 0.434576 | 4.1:+1191705 | MS.gene015610:CDS |
TCCCCTGTTTGATGTTTCAC+AGG | 0.436490 | 4.1:+1190705 | MS.gene015610:CDS |
TGCCATTGAATGCAGGAGAT+TGG | 0.436671 | 4.1:+1191189 | MS.gene015610:CDS |
GCTGGTTCCCCGTCCGTCAT+TGG | 0.437439 | 4.1:-1191937 | None:intergenic |
GACTCTAAAGGTTGAGACTT+TGG | 0.437729 | 4.1:-1191847 | None:intergenic |
CAGATATGTTCCAGTTAAGT+TGG | 0.438153 | 4.1:+1194501 | MS.gene015610:CDS |
ACAATCTGGTCGATAGCTTC+TGG | 0.438425 | 4.1:+1189670 | MS.gene015610:CDS |
AATATGCTTGCAACTCCCTC+TGG | 0.439832 | 4.1:-1191703 | None:intergenic |
GGTGGGAACAGTCGTAGGCT+TGG | 0.440669 | 4.1:-1194030 | None:intergenic |
ATCCAATCTCCTGCATTCAA+TGG | 0.441331 | 4.1:-1191191 | None:intergenic |
TCCGTCATTGGAACATCATC+TGG | 0.441477 | 4.1:-1191925 | None:intergenic |
GATTAAAGCCGTTGGTGAAA+AGG | 0.442049 | 4.1:-1193934 | None:intergenic |
ATCAGCAATGGCTGTGGATG+AGG | 0.444703 | 4.1:+1194651 | MS.gene015610:CDS |
GATGGCGCCCTACTTGCCTC+AGG | 0.446713 | 4.1:+1192509 | MS.gene015610:CDS |
TGGAAAATACCAACAAGCTA+TGG | 0.449129 | 4.1:+1191162 | MS.gene015610:CDS |
TACACTGATAGTGCTGTTGC+CGG | 0.449237 | 4.1:+1192824 | MS.gene015610:CDS |
GGAACACTTGTGGAGATCTC+TGG | 0.452349 | 4.1:-1189693 | None:intergenic |
TGAGACAAGAACTCAAACTT+TGG | 0.455764 | 4.1:-1193981 | None:intergenic |
CATGGTGCATGTCTAGGTCT+TGG | 0.456191 | 4.1:+1192743 | MS.gene015610:CDS |
TTGCCTCAGGGTGGGACTGG+TGG | 0.456946 | 4.1:+1192522 | MS.gene015610:CDS |
CTCACTTGTTATGGCTGTAA+AGG | 0.458815 | 4.1:-1192071 | None:intergenic |
GCCAAATTCAGTGCAACGGC+TGG | 0.460539 | 4.1:+1192441 | MS.gene015610:CDS |
GATGAAGAACTCTGCAATCC+TGG | 0.462319 | 4.1:-1194631 | None:intergenic |
AGCTCTGGGAATTGCTCTTA+CGG | 0.463949 | 4.1:+1193038 | MS.gene015610:CDS |
GAGAGGTTAAACAAAATAAA+GGG | 0.463995 | 4.1:+1192006 | MS.gene015610:CDS |
TCTCTCCAACCTCAACAATC+TGG | 0.466462 | 4.1:+1189656 | MS.gene015610:CDS |
CCATAGAGGTCATTTGCAGC+AGG | 0.467827 | 4.1:+1192476 | MS.gene015610:CDS |
CCACAATTGCTTCCAGTCTC+GGG | 0.470197 | 4.1:-1191019 | None:intergenic |
AGGACAGAACTAACCTGCTC+TGG | 0.470545 | 4.1:-1193282 | None:intergenic |
TTAATGAACTTCTCCTGAGC+AGG | 0.471986 | 4.1:-1194463 | None:intergenic |
TCCAGCATGCATTATTGCAT+TGG | 0.472646 | 4.1:-1192273 | None:intergenic |
GCTGTTGCCGGTGAGGCTGC+TGG | 0.476468 | 4.1:+1192836 | MS.gene015610:CDS |
AAGCTTATGAAATAGATAAG+AGG | 0.477531 | 4.1:-1193909 | None:intergenic |
GGCTTCTCCATCCTTCTCAC+TGG | 0.480813 | 4.1:-1194210 | None:intergenic |
CATTTCTTCCGCCAGCATCA+AGG | 0.480834 | 4.1:-1193797 | None:intergenic |
CCCGAGACTGGAAGCAATTG+TGG | 0.480899 | 4.1:+1191019 | MS.gene015610:CDS |
CTCTGATTTCTTCTCTGTTG+GGG | 0.482784 | 4.1:-1194395 | None:intergenic |
TGACCATAGCCATTGCTATG+AGG | 0.488921 | 4.1:-1193581 | None:intergenic |
GGAGAGAGCGTGAATCTTCA+GGG | 0.489567 | 4.1:-1189640 | None:intergenic |
TGGCAGTTCCCATAGCTTGT+TGG | 0.489815 | 4.1:-1191171 | None:intergenic |
GACTCACTATCCTATGCCCT+TGG | 0.491337 | 4.1:+1190676 | MS.gene015610:CDS |
TGAGCAGATGACTCGAGATC+AGG | 0.492635 | 4.1:+1193095 | MS.gene015610:CDS |
TGGCATGTATGCACTGGCTT+TGG | 0.492933 | 4.1:+1193137 | MS.gene015610:CDS |
TCTACATCAGCTCCAAGTGC+TGG | 0.494421 | 4.1:+1194173 | MS.gene015610:CDS |
CAGGATCCAATATTACGTTA+TGG | 0.496766 | 4.1:+1193114 | MS.gene015610:CDS |
TATCAAAGTAGACCCGAGAC+TGG | 0.497967 | 4.1:+1191007 | MS.gene015610:CDS |
ATGTTTCAGAGGGTTAGCTC+TGG | 0.498173 | 4.1:+1193023 | MS.gene015610:intron |
GTCCCACCCTGAGGCAAGTA+GGG | 0.504577 | 4.1:-1192516 | None:intergenic |
CATCAGCTAAGGCCAAAGCC+AGG | 0.505060 | 4.1:+1194093 | MS.gene015610:CDS |
ACGACGTTGGTCAGCTCAGC+CGG | 0.507655 | 4.1:+1189582 | MS.gene015610:CDS |
CAGCTCAGCCGGTGGCATGT+TGG | 0.508274 | 4.1:+1189593 | MS.gene015610:CDS |
GCAGTTGATGTCGTAGATGC+AGG | 0.509373 | 4.1:-1194595 | None:intergenic |
TCAGCTCCAAGTGCTGGAAA+AGG | 0.509472 | 4.1:+1194179 | MS.gene015610:CDS |
CTTGGAGCTGATGTAGAGTC+AGG | 0.509922 | 4.1:-1194167 | None:intergenic |
TAAGAAAGCTGAGGAACAGA+AGG | 0.510396 | 4.1:+1194121 | MS.gene015610:CDS |
TTTGGCTCTACGGACTCTAA+AGG | 0.511037 | 4.1:-1191859 | None:intergenic |
TAGAATCTCAAAAGTTGGCT+CGG | 0.513023 | 4.1:-1194419 | None:intergenic |
GTTGAGCAGAGCTACTAATT+GGG | 0.514161 | 4.1:+1192419 | MS.gene015610:CDS |
GTTGAGACTTTGGCAATGAA+AGG | 0.514680 | 4.1:-1191837 | None:intergenic |
GACCATAGCCATTGCTATGA+GGG | 0.517067 | 4.1:-1193580 | None:intergenic |
ATCGACCAGATTGTTGAGGT+TGG | 0.517100 | 4.1:-1189661 | None:intergenic |
ATGATGTTCCAATGACGGAC+GGG | 0.518455 | 4.1:+1191929 | MS.gene015610:CDS |
TTTGATGCCCTCTCCATGGT+TGG | 0.520103 | 4.1:-1192598 | None:intergenic |
TACAATCCACATGTTCGTTA+CGG | 0.520609 | 4.1:+1193450 | MS.gene015610:CDS |
CTGATGTGAGTGATGATGTC+AGG | 0.520902 | 4.1:+1193217 | MS.gene015610:CDS |
GTGGATTGTATGATTCTGAT+AGG | 0.523060 | 4.1:-1193437 | None:intergenic |
TTCTTCATCAGCAATGGCTG+TGG | 0.523176 | 4.1:+1194645 | MS.gene015610:CDS |
GGTGGTGCTCTTTATGCCCT+CGG | 0.523440 | 4.1:+1192564 | MS.gene015610:CDS |
CGCCCTACTTGCCTCAGGGT+GGG | 0.525021 | 4.1:+1192514 | MS.gene015610:CDS |
GCTGTGGGCATTTCCTGTGC+GGG | 0.525424 | 4.1:+1193483 | MS.gene015610:CDS |
GGTTGGAACAGGCAGTGATA+AGG | 0.525506 | 4.1:+1192880 | MS.gene015610:CDS |
ACTGCTGGCGGGTCAGGACC+AGG | 0.525643 | 4.1:+1194613 | MS.gene015610:CDS |
CAGCATGGCCAACATGCCAC+CGG | 0.526548 | 4.1:-1189601 | None:intergenic |
GAGGATACCATGAGCAAGAT+GGG | 0.527104 | 4.1:+1193753 | MS.gene015610:CDS |
TTCAGTCATGGCTACGACGT+TGG | 0.527304 | 4.1:+1189569 | None:intergenic |
GAAGCTAGTGATTCGCGTGT+TGG | 0.527917 | 4.1:+1193618 | MS.gene015610:CDS |
AGTCCCACCCTGAGGCAAGT+AGG | 0.529432 | 4.1:-1192517 | None:intergenic |
CAATTCAGGTGTATTGTGGA+TGG | 0.530057 | 4.1:+1191142 | MS.gene015610:intron |
ATTCAACATGGTGCATGTCT+AGG | 0.530327 | 4.1:+1192737 | MS.gene015610:CDS |
TCTTCAATTCAGGTGTATTG+TGG | 0.532154 | 4.1:+1191138 | MS.gene015610:intron |
AGAATCTCAAAAGTTGGCTC+GGG | 0.532463 | 4.1:-1194418 | None:intergenic |
TGACATTTAGAAGAAAAGCT+TGG | 0.532851 | 4.1:-1191807 | None:intergenic |
TGCCGCATTACTTGTATCAA+AGG | 0.534132 | 4.1:+1190325 | MS.gene015610:CDS |
TCGTGCTGCGCAAGCTATCA+CGG | 0.534450 | 4.1:-1192629 | None:intergenic |
CATAGCAATGGCTATGGTCA+TGG | 0.535078 | 4.1:+1193584 | MS.gene015610:CDS |
AGGAGTTTGATCAGCATCAA+AGG | 0.536478 | 4.1:+1190297 | MS.gene015610:CDS |
GATGTTGACAAAACAGCAGT+TGG | 0.538017 | 4.1:-1194074 | None:intergenic |
CGTGAATCTTCAGGGAGATG+TGG | 0.540725 | 4.1:-1189632 | None:intergenic |
GGAAAATACCAACAAGCTAT+GGG | 0.540976 | 4.1:+1191163 | MS.gene015610:CDS |
TCGAATGGTTGAGGAGGTTG+AGG | 0.541370 | 4.1:-1194676 | None:intergenic |
TATCAGTATGGGCCTACTCA+TGG | 0.541724 | 4.1:+1192859 | MS.gene015610:CDS |
TGTTTCAGAGGGTTAGCTCT+GGG | 0.542560 | 4.1:+1193024 | MS.gene015610:intron |
GGCACATTGACAGCAGAAGC+TGG | 0.542844 | 4.1:-1191955 | None:intergenic |
CTTGCGCAGCACGACTGTTG+AGG | 0.543633 | 4.1:+1192638 | MS.gene015610:CDS |
TTACGGAGCAGCTCTTGCTG+TGG | 0.543767 | 4.1:+1193467 | MS.gene015610:CDS |
GAGGCTGCTGGTATCAGTAT+GGG | 0.546660 | 4.1:+1192848 | MS.gene015610:CDS |
TGAGGATACCATGAGCAAGA+TGG | 0.547720 | 4.1:+1193752 | MS.gene015610:CDS |
TGGGAACTGCCATTGAATGC+AGG | 0.550560 | 4.1:+1191182 | MS.gene015610:CDS |
ACTAAGACCTGTACCCGCAC+AGG | 0.553691 | 4.1:-1193496 | None:intergenic |
GCCAATGCAATAATGCATGC+TGG | 0.554004 | 4.1:+1192272 | MS.gene015610:CDS |
TACGGAGCAGCTCTTGCTGT+GGG | 0.554446 | 4.1:+1193468 | MS.gene015610:CDS |
GAAATACTTTAACAAGGAGA+CGG | 0.555096 | 4.1:-1191621 | None:intergenic |
GGGACCAGCTCCAAGGGCAT+AGG | 0.559805 | 4.1:-1190686 | None:intergenic |
TGCTGTGGGCATTTCCTGTG+CGG | 0.561269 | 4.1:+1193482 | MS.gene015610:CDS |
ACTCAGAATGCTGGTGTGAG+TGG | 0.561477 | 4.1:+1191901 | MS.gene015610:CDS |
AGGAAAGTCTTCCAGTGAGA+AGG | 0.561790 | 4.1:+1194199 | MS.gene015610:CDS |
AAGTCTTCCAGTGAGAAGGA+TGG | 0.561796 | 4.1:+1194203 | MS.gene015610:CDS |
TTCCCTCAGGAAAGTATCCA+CGG | 0.561912 | 4.1:-1192300 | None:intergenic |
GCAGAGTTCTTCATCAGCAA+TGG | 0.561955 | 4.1:+1194639 | MS.gene015610:CDS |
ATCTCTAGGAACTGCTGATG+AGG | 0.563533 | 4.1:+1192772 | MS.gene015610:CDS |
TGCCCTCATAGCAATGGCTA+TGG | 0.563797 | 4.1:+1193578 | MS.gene015610:CDS |
GAGGTCATTTGCAGCAGGGA+AGG | 0.563886 | 4.1:+1192481 | MS.gene015610:CDS |
TGAGAGTTTGTACGAAGATG+AGG | 0.564498 | 4.1:+1190277 | MS.gene015610:CDS |
GAAGGATGGAGAAGCCATGC+AGG | 0.566051 | 4.1:+1194217 | MS.gene015610:CDS |
CTACGACATCAACTGCTGGC+GGG | 0.566474 | 4.1:+1194602 | MS.gene015610:CDS |
ATTGTTTGATGCCCTCTCCA+TGG | 0.568153 | 4.1:-1192602 | None:intergenic |
TTCTGCTGTCAATGTGCCTG+AGG | 0.568847 | 4.1:+1191960 | MS.gene015610:CDS |
GCAAGAACTTCAGGCTCAGT+AGG | 0.571786 | 4.1:-1194559 | None:intergenic |
ATACATAAGGGGAACACTTG+TGG | 0.572276 | 4.1:-1189703 | None:intergenic |
AAACAGGGGACCAGCTCCAA+GGG | 0.572325 | 4.1:-1190692 | None:intergenic |
ATTGTATGATTCTGATAGGA+GGG | 0.573007 | 4.1:-1193433 | None:intergenic |
ACTTAAGATGTGTACTCGAA+TGG | 0.573319 | 4.1:-1194691 | None:intergenic |
TTTCACTGTTGAAGTAGTGG+TGG | 0.574051 | 4.1:-1194048 | None:intergenic |
GCATCTACGACATCAACTGC+TGG | 0.574200 | 4.1:+1194598 | MS.gene015610:CDS |
ACTGATACCAGCAGCCTCAC+CGG | 0.575307 | 4.1:-1192843 | None:intergenic |
GGTCTTGGATTGGCATCTCT+AGG | 0.577061 | 4.1:+1192758 | MS.gene015610:CDS |
TTCAGACCGATTAAAGCCGT+TGG | 0.577561 | 4.1:-1193942 | None:intergenic |
GGACTTGGTGTTATCCATAG+AGG | 0.578245 | 4.1:+1192462 | MS.gene015610:CDS |
GCGCCCTACTTGCCTCAGGG+TGG | 0.578270 | 4.1:+1192513 | MS.gene015610:CDS |
TCCGGAATCCTTGATGCTGG+CGG | 0.580078 | 4.1:+1193789 | MS.gene015610:CDS |
ATGGCGCCCTACTTGCCTCA+GGG | 0.581130 | 4.1:+1192510 | MS.gene015610:CDS |
TCTAACAAATCCAGCAAGAG+TGG | 0.582580 | 4.1:+1194438 | MS.gene015610:CDS |
GCTGTACTCTGATCCAGAGC+AGG | 0.584183 | 4.1:+1193269 | MS.gene015610:CDS |
ATTCATGCCAACCATGGAGA+GGG | 0.584575 | 4.1:+1192591 | MS.gene015610:CDS |
AATTGCACCCATCTTGCTCA+TGG | 0.584856 | 4.1:-1193760 | None:intergenic |
TTCACTGTTGAAGTAGTGGT+GGG | 0.585150 | 4.1:-1194047 | None:intergenic |
TGGGAACAGTCGTAGGCTTG+GGG | 0.585173 | 4.1:-1194028 | None:intergenic |
GATAAAGTTACTGCAGTGGT+TGG | 0.586930 | 4.1:+1193852 | MS.gene015610:CDS |
GTGAATCTTCAGGGAGATGT+GGG | 0.588767 | 4.1:-1189631 | None:intergenic |
AGTATGGGCCTACTCATGGT+TGG | 0.589770 | 4.1:+1192863 | MS.gene015610:CDS |
TGAGTAGAATCTGCATCACT+GGG | 0.589801 | 4.1:-1191883 | None:intergenic |
AAGTTTCACTGTTGAAGTAG+TGG | 0.590303 | 4.1:-1194051 | None:intergenic |
GATGTGTACTCGAATGGTTG+AGG | 0.593404 | 4.1:-1194685 | None:intergenic |
ATGCTCAGATAATCTGGTGA+AGG | 0.593508 | 4.1:-1191652 | None:intergenic |
AGCTTATGAAATAGATAAGA+GGG | 0.594563 | 4.1:-1193908 | None:intergenic |
CAGGAGATTGGATAAACTTG+AGG | 0.594774 | 4.1:+1191201 | MS.gene015610:CDS |
TCAACAACATCCGAAGTCAA+AGG | 0.594848 | 4.1:-1193540 | None:intergenic |
TGGTATCCTCATGCTTGTCA+AGG | 0.595965 | 4.1:-1193740 | None:intergenic |
CATAGAGGTCATTTGCAGCA+GGG | 0.597007 | 4.1:+1192477 | MS.gene015610:CDS |
ATCAGCTAAGGCCAAAGCCA+GGG | 0.602026 | 4.1:+1194094 | MS.gene015610:CDS |
GGTCTTCAAAATAAGGAGGT+CGG | 0.604928 | 4.1:-1192195 | None:intergenic |
ACAGCACAAACCCTAATGCT+AGG | 0.605035 | 4.1:-1193251 | None:intergenic |
TGCATGTCTAGGTCTTGGAT+TGG | 0.605817 | 4.1:+1192748 | MS.gene015610:CDS |
AAAGTGAAGTAATTGACGAA+TGG | 0.609715 | 4.1:-1193187 | None:intergenic |
GCAGATTCTACTCAGAATGC+TGG | 0.609773 | 4.1:+1191892 | MS.gene015610:CDS |
CAGGGCTAGTAAGAAAGCTG+AGG | 0.614232 | 4.1:+1194112 | MS.gene015610:CDS |
CAAACAGGGGACCAGCTCCA+AGG | 0.614560 | 4.1:-1190693 | None:intergenic |
TGATGTTCCAATGACGGACG+GGG | 0.615778 | 4.1:+1191930 | MS.gene015610:CDS |
AGCTATCGACCAGATTGTTG+AGG | 0.617954 | 4.1:-1189665 | None:intergenic |
TTAAGAAGCACAAACCCTGA+AGG | 0.618792 | 4.1:-1194526 | None:intergenic |
TGATAGTGCTGTTGCCGGTG+AGG | 0.619271 | 4.1:+1192829 | MS.gene015610:CDS |
GAAGACCATAAAGCAGTCTG+TGG | 0.620130 | 4.1:+1192211 | MS.gene015610:CDS |
ACCAGATGATGTTCCAATGA+CGG | 0.620385 | 4.1:+1191924 | MS.gene015610:CDS |
GCAGCAGGGAAGGTCACTGA+TGG | 0.621007 | 4.1:+1192491 | MS.gene015610:CDS |
TCAGGGTGCCCTCATAGCAA+TGG | 0.622547 | 4.1:+1193572 | MS.gene015610:CDS |
TTGGGCCAAATTCAGTGCAA+CGG | 0.622608 | 4.1:+1192437 | MS.gene015610:CDS |
GGTGGTAGTCCATACTCAGA+AGG | 0.623238 | 4.1:+1192543 | MS.gene015610:CDS |
TATGTTCTTGGATGAGCCAG+AGG | 0.626390 | 4.1:+1191687 | MS.gene015610:CDS |
GATCCAATATTACGTTATGG+TGG | 0.627085 | 4.1:+1193117 | MS.gene015610:CDS |
TCTACGACATCAACTGCTGG+CGG | 0.628294 | 4.1:+1194601 | MS.gene015610:CDS |
GGTCTGATTCATGCCAACCA+TGG | 0.628696 | 4.1:+1192585 | MS.gene015610:CDS |
GATAGGAGGGAAACAATTCG+AGG | 0.629557 | 4.1:-1193420 | None:intergenic |
GATGATGTTCCAATGACGGA+CGG | 0.631033 | 4.1:+1191928 | MS.gene015610:CDS |
TATGGCCAGGTCATTCAACA+TGG | 0.632302 | 4.1:+1192725 | MS.gene015610:intron |
GATGTGGGACTCGTGCAGCA+TGG | 0.634411 | 4.1:-1189616 | None:intergenic |
GGTTTACGGAAGAGAAGAAG+AGG | 0.635138 | 4.1:+1193059 | MS.gene015610:CDS |
AACCGTGGATACTTTCCTGA+GGG | 0.636227 | 4.1:+1192298 | MS.gene015610:CDS |
AGAGTGATTACATACATAAG+GGG | 0.636567 | 4.1:-1189714 | None:intergenic |
ACAAGAAGTGACAATGTGCA+AGG | 0.637151 | 4.1:+1191232 | MS.gene015610:CDS |
GATTCATGCCAACCATGGAG+AGG | 0.637281 | 4.1:+1192590 | MS.gene015610:CDS |
TTATGGTCTTCAAAATAAGG+AGG | 0.637784 | 4.1:-1192199 | None:intergenic |
ATGTTCTTGGATGAGCCAGA+GGG | 0.637862 | 4.1:+1191688 | MS.gene015610:CDS |
GTAGTGGTGGGAACAGTCGT+AGG | 0.638941 | 4.1:-1194035 | None:intergenic |
GCATGATAAAGTTACTGCAG+TGG | 0.640321 | 4.1:+1193848 | MS.gene015610:CDS |
GTTGGCATGAATCAGACCGA+GGG | 0.641472 | 4.1:-1192580 | None:intergenic |
TTATGGTGGCATGTATGCAC+TGG | 0.648795 | 4.1:+1193131 | MS.gene015610:CDS |
GCCAGCATCAAGGATTCCGG+AGG | 0.649554 | 4.1:-1193787 | None:intergenic |
GAATCTTAGAGAATACAGAC+AGG | 0.652688 | 4.1:+1191294 | MS.gene015610:CDS |
GCTGCTCCGTAACGAACATG+TGG | 0.655887 | 4.1:-1193456 | None:intergenic |
ATCCTGTGAAACATCAAACA+GGG | 0.656841 | 4.1:-1190707 | None:intergenic |
GGTAGTCCATACTCAGAAGG+TGG | 0.657262 | 4.1:+1192546 | MS.gene015610:CDS |
AATTATCCTTGACAAGCATG+AGG | 0.660003 | 4.1:+1193734 | MS.gene015610:CDS |
GATTGTATGATTCTGATAGG+AGG | 0.661847 | 4.1:-1193434 | None:intergenic |
TGCCTGTTCCAACCATGAGT+AGG | 0.663707 | 4.1:-1192871 | None:intergenic |
TGCGGGTACAGGTCTTAGTG+AGG | 0.666367 | 4.1:+1193500 | MS.gene015610:CDS |
GCACTGGCTTTGGCGTATAG+CGG | 0.666930 | 4.1:+1193147 | MS.gene015610:CDS |
TAATGTATGCATTACCTGCA+TGG | 0.667865 | 4.1:-1194231 | None:intergenic |
AATGCATGCTGGAACAACCG+TGG | 0.668717 | 4.1:+1192283 | MS.gene015610:CDS |
TACCTTTGATACAAGTAATG+CGG | 0.671026 | 4.1:-1190327 | None:intergenic |
ACGTTGGTCAGCTCAGCCGG+TGG | 0.681112 | 4.1:+1189585 | MS.gene015610:CDS |
GGTTGGCATGAATCAGACCG+AGG | 0.688601 | 4.1:-1192581 | None:intergenic |
TCTTAGAGAATACAGACAGG+AGG | 0.696091 | 4.1:+1191297 | MS.gene015610:CDS |
TTACGGAAGAGAAGAAGAGG+CGG | 0.701441 | 4.1:+1193062 | MS.gene015610:CDS |
CAACCGTGGATACTTTCCTG+AGG | 0.701995 | 4.1:+1192297 | MS.gene015610:CDS |
CCACCACCAGTCCCACCCTG+AGG | 0.702255 | 4.1:-1192525 | None:intergenic |
GTGTACTCGAATGGTTGAGG+AGG | 0.711248 | 4.1:-1194682 | None:intergenic |
TCCTGTGAAACATCAAACAG+GGG | 0.711450 | 4.1:-1190706 | None:intergenic |
TGCTGCGCAAGCTATCACGG+AGG | 0.731636 | 4.1:-1192626 | None:intergenic |
ATGTGAGTGATGATGTCAGG+AGG | 0.740753 | 4.1:+1193220 | MS.gene015610:CDS |
GTATTCTCTAAGATTCACAA+AGG | 0.747713 | 4.1:-1191287 | None:intergenic |
TGATGATGTCAGGAGGACTG+CGG | 0.772419 | 4.1:+1193227 | MS.gene015610:CDS |
TGGCATAAATGGTAGCACTG+TGG | 0.777224 | 4.1:-1192253 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAATCATAAAAATTTCAA+TGG | - | chr4.1:1191430-1191449 | None:intergenic | 10.0% |
!! | CATCTAAGAATAATAATATA+TGG | - | chr4.1:1190568-1190587 | None:intergenic | 15.0% |
!!! | TTATAAAGAATTTTTAACAG+CGG | + | chr4.1:1191549-1191568 | MS.gene015610:intron | 15.0% |
!!! | TTTTGTTCCTTTAAAATTTT+AGG | + | chr4.1:1192392-1192411 | MS.gene015610:intron | 15.0% |
!! | AATGAAAAGTCTTAATGATT+TGG | - | chr4.1:1190124-1190143 | None:intergenic | 20.0% |
!! | ACGAAAAAATTATAAGGTAA+AGG | + | chr4.1:1192939-1192958 | MS.gene015610:intron | 20.0% |
!! | AGAGGAAATATAAAAAGAAA+AGG | - | chr4.1:1193305-1193324 | None:intergenic | 20.0% |
!! | ATATTATTATTCTTAGATGC+TGG | + | chr4.1:1190569-1190588 | MS.gene015610:intron | 20.0% |
!! | TAAAATTAAAGGGATGAAAA+GGG | - | chr4.1:1191391-1191410 | None:intergenic | 20.0% |
!! | TAATAAAAGACCTAAGATAA+AGG | - | chr4.1:1190640-1190659 | None:intergenic | 20.0% |
!! | TTAGATCATCATTTATTTGT+TGG | + | chr4.1:1192119-1192138 | MS.gene015610:intron | 20.0% |
!!! | AACCAATCCTAAAATTTTAA+AGG | - | chr4.1:1192402-1192421 | None:intergenic | 20.0% |
!!! | AGATAACAAATAAGTATTGT+CGG | + | chr4.1:1190476-1190495 | MS.gene015610:intron | 20.0% |
!!! | CCTTTAAAACAATAAAGTTT+CGG | - | chr4.1:1194369-1194388 | None:intergenic | 20.0% |
!!! | GTTTTTTAGTGTTAATTTGT+TGG | + | chr4.1:1190198-1190217 | MS.gene015610:intron | 20.0% |
!!! | TAAGATTTTATAAATTGTCG+TGG | - | chr4.1:1190926-1190945 | None:intergenic | 20.0% |
!!! | TATATCTAATGTGTTGTTTA+TGG | + | chr4.1:1192707-1192726 | MS.gene015610:intron | 20.0% |
!!! | TTCCTTTAAAATTTTAGGAT+TGG | + | chr4.1:1192397-1192416 | MS.gene015610:intron | 20.0% |
! | AAAGAGTGATTACATACATA+AGG | - | chr4.1:1189719-1189738 | None:intergenic | 25.0% |
! | AAGAGTGATTACATACATAA+GGG | - | chr4.1:1189718-1189737 | None:intergenic | 25.0% |
! | AAGCTTATGAAATAGATAAG+AGG | - | chr4.1:1193912-1193931 | None:intergenic | 25.0% |
! | AGCCACACAAAAAAAAAAAA+GGG | - | chr4.1:1193342-1193361 | None:intergenic | 25.0% |
! | AGCTCAATGACTAAAATTAA+AGG | - | chr4.1:1191402-1191421 | None:intergenic | 25.0% |
! | AGCTTATGAAATAGATAAGA+GGG | - | chr4.1:1193911-1193930 | None:intergenic | 25.0% |
! | CACAACACGAAAAAATTATA+AGG | + | chr4.1:1192933-1192952 | MS.gene015610:CDS | 25.0% |
! | CTAAAATTAAAGGGATGAAA+AGG | - | chr4.1:1191392-1191411 | None:intergenic | 25.0% |
! | GAGAGGTTAAACAAAATAAA+GGG | + | chr4.1:1192006-1192025 | MS.gene015610:CDS | 25.0% |
! | GCTCAATGACTAAAATTAAA+GGG | - | chr4.1:1191401-1191420 | None:intergenic | 25.0% |
! | TACTATGATCTCTATGAAAA+TGG | + | chr4.1:1190817-1190836 | MS.gene015610:intron | 25.0% |
! | TATCATGTTTCTTTCTTACT+TGG | + | chr4.1:1190167-1190186 | MS.gene015610:intron | 25.0% |
! | TCTTATCTATTTCATAAGCT+TGG | + | chr4.1:1193911-1193930 | MS.gene015610:CDS | 25.0% |
! | TGAGAGGTTAAACAAAATAA+AGG | + | chr4.1:1192005-1192024 | MS.gene015610:CDS | 25.0% |
! | TGATATCAACAAGTGAAAAA+AGG | - | chr4.1:1190152-1190171 | None:intergenic | 25.0% |
! | TTTGAAAGCTTCTGAATTAA+GGG | + | chr4.1:1190090-1190109 | MS.gene015610:intron | 25.0% |
! | TTTGTTAGAATCTCAAAAGT+TGG | - | chr4.1:1194427-1194446 | None:intergenic | 25.0% |
!! | AAAATAAAGGGAATTTTGTC+TGG | + | chr4.1:1192018-1192037 | MS.gene015610:CDS | 25.0% |
!! | AAATCTTATGTTTTCAGCTA+AGG | + | chr4.1:1190938-1190957 | MS.gene015610:intron | 25.0% |
!! | ATCATTTATTTGTTGGTACT+TGG | + | chr4.1:1192126-1192145 | MS.gene015610:intron | 25.0% |
!! | ATCTTAGGTCTTTTATTACT+TGG | + | chr4.1:1190642-1190661 | MS.gene015610:intron | 25.0% |
!! | CATCTTTTAAACATCTCTTT+TGG | + | chr4.1:1191452-1191471 | MS.gene015610:intron | 25.0% |
!! | GAAGTTCATTAAATTTTTGC+AGG | + | chr4.1:1194474-1194493 | MS.gene015610:CDS | 25.0% |
!! | GGTAAGGAAAGTATATTATT+TGG | + | chr4.1:1193649-1193668 | MS.gene015610:intron | 25.0% |
!! | TCTTAGGTCTTTTATTACTT+GGG | + | chr4.1:1190643-1190662 | MS.gene015610:intron | 25.0% |
!!! | ACTTCAAATAGCTTTTGATT+TGG | + | chr4.1:1191771-1191790 | MS.gene015610:CDS | 25.0% |
!!! | ATTGATAATATTGGTTCAGT+TGG | + | chr4.1:1190845-1190864 | MS.gene015610:intron | 25.0% |
!!! | ATTGTTTCTAAATGTTTCAG+AGG | + | chr4.1:1193012-1193031 | MS.gene015610:intron | 25.0% |
!!! | CCGAAACTTTATTGTTTTAA+AGG | + | chr4.1:1194366-1194385 | MS.gene015610:intron | 25.0% |
!!! | GCTTTTGAAATACTTTAACA+AGG | - | chr4.1:1191630-1191649 | None:intergenic | 25.0% |
!!! | GTTAGTGGTTTTATTCATTT+TGG | + | chr4.1:1190876-1190895 | MS.gene015610:intron | 25.0% |
!!! | TGCTTGTTTTTTTTTTGTTC+AGG | + | chr4.1:1191594-1191613 | MS.gene015610:intron | 25.0% |
!!! | TTCTTTGATTTCATGCTTTT+CGG | + | chr4.1:1189747-1189766 | MS.gene015610:intron | 25.0% |
!!! | TTGTTTCTAAATGTTTCAGA+GGG | + | chr4.1:1193013-1193032 | MS.gene015610:intron | 25.0% |
!!! | TTTTGAAAGCTTCTGAATTA+AGG | + | chr4.1:1190089-1190108 | MS.gene015610:intron | 25.0% |
AAAAAAAAAAGGGGGTAACT+CGG | - | chr4.1:1193332-1193351 | None:intergenic | 30.0% | |
AAAACCTATGTTGTCAATAG+TGG | - | chr4.1:1190073-1190092 | None:intergenic | 30.0% | |
AAAGTGAAGTAATTGACGAA+TGG | - | chr4.1:1193190-1193209 | None:intergenic | 30.0% | |
AATATACTTTCCTTACCTGA+AGG | - | chr4.1:1193646-1193665 | None:intergenic | 30.0% | |
AGAGTGATTACATACATAAG+GGG | - | chr4.1:1189717-1189736 | None:intergenic | 30.0% | |
AGATTTGAGAGTCCTATTAA+CGG | - | chr4.1:1191484-1191503 | None:intergenic | 30.0% | |
ATGAAAAAACTTAAGTCCTC+CGG | - | chr4.1:1190543-1190562 | None:intergenic | 30.0% | |
ATTGTATGATTCTGATAGGA+GGG | - | chr4.1:1193436-1193455 | None:intergenic | 30.0% | |
CAACGAAAATTGAGAATTGA+GGG | - | chr4.1:1191114-1191133 | None:intergenic | 30.0% | |
CAGCCACACAAAAAAAAAAA+AGG | - | chr4.1:1193343-1193362 | None:intergenic | 30.0% | |
CCACACAAAAAAAAAAAAGG+GGG | - | chr4.1:1193340-1193359 | None:intergenic | 30.0% | |
GAAATACTTTAACAAGGAGA+CGG | - | chr4.1:1191624-1191643 | None:intergenic | 30.0% | |
GCCACACAAAAAAAAAAAAG+GGG | - | chr4.1:1193341-1193360 | None:intergenic | 30.0% | |
GCTTTATGGTCTTCAAAATA+AGG | - | chr4.1:1192205-1192224 | None:intergenic | 30.0% | |
TACCTTTGATACAAGTAATG+CGG | - | chr4.1:1190330-1190349 | None:intergenic | 30.0% | |
TCAAATTCTACTACACACAA+TGG | - | chr4.1:1189950-1189969 | None:intergenic | 30.0% | |
TGACATTTAGAAGAAAAGCT+TGG | - | chr4.1:1191810-1191829 | None:intergenic | 30.0% | |
TTATGGTCTTCAAAATAAGG+AGG | - | chr4.1:1192202-1192221 | None:intergenic | 30.0% | |
TTGAAAGCTTCTGAATTAAG+GGG | + | chr4.1:1190091-1190110 | MS.gene015610:intron | 30.0% | |
TTTCTTCACTCCTTTATCTT+AGG | + | chr4.1:1190627-1190646 | MS.gene015610:intron | 30.0% | |
! | AAACAAAGATGATGCTCTTT+TGG | + | chr4.1:1191747-1191766 | MS.gene015610:CDS | 30.0% |
! | AGCAATAGTCTTTTCTTTGA+CGG | - | chr4.1:1192688-1192707 | None:intergenic | 30.0% |
! | AGTCTTAGAAAGTAGTCTTA+TGG | - | chr4.1:1193826-1193845 | None:intergenic | 30.0% |
! | ATATGCTAGTTTCAAGTCTA+AGG | + | chr4.1:1190971-1190990 | MS.gene015610:CDS | 30.0% |
! | ATGGACTGCATTGATAATAT+TGG | + | chr4.1:1190836-1190855 | MS.gene015610:intron | 30.0% |
! | CATTATTGCATTGGCATAAA+TGG | - | chr4.1:1192267-1192286 | None:intergenic | 30.0% |
! | GTTGGAATGAGAATGTTTTT+GGG | + | chr4.1:1190216-1190235 | MS.gene015610:intron | 30.0% |
! | TAAAGAATTTTTAACAGCGG+TGG | + | chr4.1:1191552-1191571 | MS.gene015610:intron | 30.0% |
! | TGTTGGAATGAGAATGTTTT+TGG | + | chr4.1:1190215-1190234 | MS.gene015610:intron | 30.0% |
!! | ATGTTGGTTCTTATACTGTT+TGG | + | chr4.1:1192153-1192172 | MS.gene015610:intron | 30.0% |
!! | GAGTTTATTTTCAATCGTGT+AGG | + | chr4.1:1189870-1189889 | MS.gene015610:intron | 30.0% |
!! | GTATTCTCTAAGATTCACAA+AGG | - | chr4.1:1191290-1191309 | None:intergenic | 30.0% |
!! | TAGTACAAAGTGTTGTCAAT+CGG | + | chr4.1:1190001-1190020 | MS.gene015610:intron | 30.0% |
!! | TTGGAATGAGAATGTTTTTG+GGG | + | chr4.1:1190217-1190236 | MS.gene015610:intron | 30.0% |
!! | TTTTCAGCCAATTTTGGTAT+TGG | + | chr4.1:1193883-1193902 | MS.gene015610:CDS | 30.0% |
!!! | TCAGCATACATTTTTTCACT+TGG | - | chr4.1:1191988-1192007 | None:intergenic | 30.0% |
AAAAAAAAAGGGGGTAACTC+GGG | - | chr4.1:1193331-1193350 | None:intergenic | 35.0% | |
AAGTTTCACTGTTGAAGTAG+TGG | - | chr4.1:1194054-1194073 | None:intergenic | 35.0% | |
AATCCTGTGAAACATCAAAC+AGG | - | chr4.1:1190711-1190730 | None:intergenic | 35.0% | |
AATTATCCTTGACAAGCATG+AGG | + | chr4.1:1193734-1193753 | MS.gene015610:CDS | 35.0% | |
AATTCTACTACACACAATGG+TGG | - | chr4.1:1189947-1189966 | None:intergenic | 35.0% | |
AATTCTCACCTAGAAGAGTA+TGG | - | chr4.1:1190744-1190763 | None:intergenic | 35.0% | |
AGAGGGAGAAAACAAAACTA+TGG | - | chr4.1:1192345-1192364 | None:intergenic | 35.0% | |
AGGAACAAAAACCTCAAGAA+TGG | - | chr4.1:1192382-1192401 | None:intergenic | 35.0% | |
ATCCTGTGAAACATCAAACA+GGG | - | chr4.1:1190710-1190729 | None:intergenic | 35.0% | |
ATGCCACCATAACGTAATAT+TGG | - | chr4.1:1193123-1193142 | None:intergenic | 35.0% | |
ATTAAAGGGATGAAAAGGGA+AGG | - | chr4.1:1191387-1191406 | None:intergenic | 35.0% | |
ATTGAGGGAACTCAAAGTTA+AGG | - | chr4.1:1191099-1191118 | None:intergenic | 35.0% | |
CAATCCACTATTGACAACAT+AGG | + | chr4.1:1190066-1190085 | MS.gene015610:intron | 35.0% | |
CAGATATGTTCCAGTTAAGT+TGG | + | chr4.1:1194501-1194520 | MS.gene015610:CDS | 35.0% | |
CAGGATCCAATATTACGTTA+TGG | + | chr4.1:1193114-1193133 | MS.gene015610:CDS | 35.0% | |
CTCAAGAATGGGAAATTACA+GGG | - | chr4.1:1192370-1192389 | None:intergenic | 35.0% | |
GAATCTTAGAGAATACAGAC+AGG | + | chr4.1:1191294-1191313 | MS.gene015610:CDS | 35.0% | |
GAGGGAGAAAACAAAACTAT+GGG | - | chr4.1:1192344-1192363 | None:intergenic | 35.0% | |
GATCCAATATTACGTTATGG+TGG | + | chr4.1:1193117-1193136 | MS.gene015610:CDS | 35.0% | |
GATTGTATGATTCTGATAGG+AGG | - | chr4.1:1193437-1193456 | None:intergenic | 35.0% | |
GCAACGAAAATTGAGAATTG+AGG | - | chr4.1:1191115-1191134 | None:intergenic | 35.0% | |
GGAAAATACCAACAAGCTAT+GGG | + | chr4.1:1191163-1191182 | MS.gene015610:CDS | 35.0% | |
GGAACAAAAACCTCAAGAAT+GGG | - | chr4.1:1192381-1192400 | None:intergenic | 35.0% | |
GTCTATACGCAGAATATATC+CGG | + | chr4.1:1191352-1191371 | MS.gene015610:intron | 35.0% | |
GTGAAAAAATGTATGCTGAG+AGG | + | chr4.1:1191989-1192008 | MS.gene015610:CDS | 35.0% | |
TAATGTATGCATTACCTGCA+TGG | - | chr4.1:1194234-1194253 | None:intergenic | 35.0% | |
TACAATCCACATGTTCGTTA+CGG | + | chr4.1:1193450-1193469 | MS.gene015610:CDS | 35.0% | |
TACTTTCCTGAGGGAAAATT+TGG | + | chr4.1:1192307-1192326 | MS.gene015610:CDS | 35.0% | |
TAGAATCTCAAAAGTTGGCT+CGG | - | chr4.1:1194422-1194441 | None:intergenic | 35.0% | |
TCAGTAATAGCAAGAACTTC+AGG | - | chr4.1:1194571-1194590 | None:intergenic | 35.0% | |
TCGTTGCATTTCTTCAATTC+AGG | + | chr4.1:1191128-1191147 | MS.gene015610:intron | 35.0% | |
TCTTCAATTCAGGTGTATTG+TGG | + | chr4.1:1191138-1191157 | MS.gene015610:intron | 35.0% | |
TGACAAATGCTCAGATAATC+TGG | - | chr4.1:1191661-1191680 | None:intergenic | 35.0% | |
TGAGACAAGAACTCAAACTT+TGG | - | chr4.1:1193984-1194003 | None:intergenic | 35.0% | |
TGGAAAATACCAACAAGCTA+TGG | + | chr4.1:1191162-1191181 | MS.gene015610:CDS | 35.0% | |
TTAAAGGGATGAAAAGGGAA+GGG | - | chr4.1:1191386-1191405 | None:intergenic | 35.0% | |
TTGTCAGTGTCTTATGTTCT+TGG | + | chr4.1:1191675-1191694 | MS.gene015610:CDS | 35.0% | |
! | GCAATAGTCTTTTCTTTGAC+GGG | - | chr4.1:1192687-1192706 | None:intergenic | 35.0% |
! | GTGGATTGTATGATTCTGAT+AGG | - | chr4.1:1193440-1193459 | None:intergenic | 35.0% |
! | TGTTTTGTCAACATCAGCTA+AGG | + | chr4.1:1194082-1194101 | MS.gene015610:CDS | 35.0% |
! | TTGCAGTTTTCAGCCAATTT+TGG | + | chr4.1:1193877-1193896 | MS.gene015610:CDS | 35.0% |
! | TTGGGGTATTCAAAAAGTGA+AGG | - | chr4.1:1194014-1194033 | None:intergenic | 35.0% |
!! | CAATAGTGGATTGCAGAAAA+TGG | - | chr4.1:1190059-1190078 | None:intergenic | 35.0% |
!! | TAAGGTAAAGGTGTTTCACT+CGG | + | chr4.1:1192951-1192970 | MS.gene015610:intron | 35.0% |
!! | TCATCCTTTTTGATTGTACC+CGG | + | chr4.1:1190502-1190521 | MS.gene015610:intron | 35.0% |
!! | TTTTCACCAACGGCTTTAAT+CGG | + | chr4.1:1193936-1193955 | MS.gene015610:CDS | 35.0% |
!!! | ATTTTTTCACTTGGATCCTC+AGG | - | chr4.1:1191979-1191998 | None:intergenic | 35.0% |
!!! | CCCCCTTTTTTTTTTTTGTG+TGG | + | chr4.1:1193337-1193356 | MS.gene015610:intron | 35.0% |
!!! | GTTGTTGATTTTGTTCGTCA+GGG | + | chr4.1:1193555-1193574 | MS.gene015610:CDS | 35.0% |
!!! | TGTTGTTGATTTTGTTCGTC+AGG | + | chr4.1:1193554-1193573 | MS.gene015610:CDS | 35.0% |
!!! | TTTTGGTGTTGACCGTTAAT+AGG | + | chr4.1:1191469-1191488 | MS.gene015610:intron | 35.0% |
AATGAGACAAATGTTTGCGC+TGG | + | chr4.1:1191520-1191539 | MS.gene015610:intron | 40.0% | |
ACAAGAAGTGACAATGTGCA+AGG | + | chr4.1:1191232-1191251 | MS.gene015610:CDS | 40.0% | |
ACCAGATGATGTTCCAATGA+CGG | + | chr4.1:1191924-1191943 | MS.gene015610:CDS | 40.0% | |
AGAATACAGACAGGAGGTAA+GGG | + | chr4.1:1191303-1191322 | MS.gene015610:intron | 40.0% | |
AGGAGTTTGATCAGCATCAA+AGG | + | chr4.1:1190297-1190316 | MS.gene015610:CDS | 40.0% | |
ATACATAAGGGGAACACTTG+TGG | - | chr4.1:1189706-1189725 | None:intergenic | 40.0% | |
ATCCAATCTCCTGCATTCAA+TGG | - | chr4.1:1191194-1191213 | None:intergenic | 40.0% | |
ATGCTCAGATAATCTGGTGA+AGG | - | chr4.1:1191655-1191674 | None:intergenic | 40.0% | |
ATGGGAAATTACAGGGAAAG+AGG | - | chr4.1:1192363-1192382 | None:intergenic | 40.0% | |
ATTCAACATGGTGCATGTCT+AGG | + | chr4.1:1192737-1192756 | MS.gene015610:CDS | 40.0% | |
CAATTCAGGTGTATTGTGGA+TGG | + | chr4.1:1191142-1191161 | MS.gene015610:intron | 40.0% | |
CAGGAGATTGGATAAACTTG+AGG | + | chr4.1:1191201-1191220 | MS.gene015610:CDS | 40.0% | |
CCTCAAGAATGGGAAATTAC+AGG | - | chr4.1:1192371-1192390 | None:intergenic | 40.0% | |
CCTGTAATTTCCCATTCTTG+AGG | + | chr4.1:1192368-1192387 | MS.gene015610:intron | 40.0% | |
CTCTGATTTCTTCTCTGTTG+GGG | - | chr4.1:1194398-1194417 | None:intergenic | 40.0% | |
GACTATGTCCATACTCTTCT+AGG | + | chr4.1:1190733-1190752 | MS.gene015610:CDS | 40.0% | |
GATAAAGTTACTGCAGTGGT+TGG | + | chr4.1:1193852-1193871 | MS.gene015610:CDS | 40.0% | |
GATGTTGACAAAACAGCAGT+TGG | - | chr4.1:1194077-1194096 | None:intergenic | 40.0% | |
GCATGATAAAGTTACTGCAG+TGG | + | chr4.1:1193848-1193867 | MS.gene015610:CDS | 40.0% | |
GCTCTGATTTCTTCTCTGTT+GGG | - | chr4.1:1194399-1194418 | None:intergenic | 40.0% | |
GGAATTGCTCTTACGGTTTA+CGG | + | chr4.1:1193045-1193064 | MS.gene015610:CDS | 40.0% | |
GGTCTTCAAAATAAGGAGGT+CGG | - | chr4.1:1192198-1192217 | None:intergenic | 40.0% | |
GTTGAGACTTTGGCAATGAA+AGG | - | chr4.1:1191840-1191859 | None:intergenic | 40.0% | |
GTTGAGCAGAGCTACTAATT+GGG | + | chr4.1:1192419-1192438 | MS.gene015610:CDS | 40.0% | |
TAAGAAAGCTGAGGAACAGA+AGG | + | chr4.1:1194121-1194140 | MS.gene015610:CDS | 40.0% | |
TAGCGGAACAGCAAACAATA+AGG | + | chr4.1:1193164-1193183 | MS.gene015610:CDS | 40.0% | |
TCAACAACATCCGAAGTCAA+AGG | - | chr4.1:1193543-1193562 | None:intergenic | 40.0% | |
TCCAGCATGCATTATTGCAT+TGG | - | chr4.1:1192276-1192295 | None:intergenic | 40.0% | |
TCCTGTGAAACATCAAACAG+GGG | - | chr4.1:1190709-1190728 | None:intergenic | 40.0% | |
TCTAACAAATCCAGCAAGAG+TGG | + | chr4.1:1194438-1194457 | MS.gene015610:CDS | 40.0% | |
TCTTAGAGAATACAGACAGG+AGG | + | chr4.1:1191297-1191316 | MS.gene015610:CDS | 40.0% | |
TGAGAGTTTGTACGAAGATG+AGG | + | chr4.1:1190277-1190296 | MS.gene015610:CDS | 40.0% | |
TGAGTAGAATCTGCATCACT+GGG | - | chr4.1:1191886-1191905 | None:intergenic | 40.0% | |
TGCCGCATTACTTGTATCAA+AGG | + | chr4.1:1190325-1190344 | MS.gene015610:CDS | 40.0% | |
TGGGAAATTACAGGGAAAGA+GGG | - | chr4.1:1192362-1192381 | None:intergenic | 40.0% | |
TTAATGAACTTCTCCTGAGC+AGG | - | chr4.1:1194466-1194485 | None:intergenic | 40.0% | |
TTCACTGTTGAAGTAGTGGT+GGG | - | chr4.1:1194050-1194069 | None:intergenic | 40.0% | |
TTTCACTGTTGAAGTAGTGG+TGG | - | chr4.1:1194051-1194070 | None:intergenic | 40.0% | |
! | AAAGGGAAGGGAAGATTTTC+CGG | - | chr4.1:1191374-1191393 | None:intergenic | 40.0% |
! | AACTCACCAAATTTTCCCTC+AGG | - | chr4.1:1192316-1192335 | None:intergenic | 40.0% |
! | AATTTTCTCCAATTGTCGCC+TGG | - | chr4.1:1193718-1193737 | None:intergenic | 40.0% |
! | AGAATCTCAAAAGTTGGCTC+GGG | - | chr4.1:1194421-1194440 | None:intergenic | 40.0% |
! | GACTCTAAAGGTTGAGACTT+TGG | - | chr4.1:1191850-1191869 | None:intergenic | 40.0% |
! | GATTAAAGCCGTTGGTGAAA+AGG | - | chr4.1:1193937-1193956 | None:intergenic | 40.0% |
! | GGAAACAGTCTCACTTGTTA+TGG | - | chr4.1:1192083-1192102 | None:intergenic | 40.0% |
! | GTTGGTACTTGGTAGTATGT+TGG | + | chr4.1:1192137-1192156 | MS.gene015610:intron | 40.0% |
! | TTAAGAAGCACAAACCCTGA+AGG | - | chr4.1:1194529-1194548 | None:intergenic | 40.0% |
!! | CAGTTGGTGTTACTTGTTAG+TGG | + | chr4.1:1190861-1190880 | MS.gene015610:intron | 40.0% |
!! | CTAATGTGTTGTTTATGGCC+AGG | + | chr4.1:1192712-1192731 | MS.gene015610:intron | 40.0% |
!! | CTCACTTGTTATGGCTGTAA+AGG | - | chr4.1:1192074-1192093 | None:intergenic | 40.0% |
!! | GAGGGTACCAATACCAAAAT+TGG | - | chr4.1:1193893-1193912 | None:intergenic | 40.0% |
!! | TACAAAGTGTTGTCAATCGG+CGG | + | chr4.1:1190004-1190023 | MS.gene015610:intron | 40.0% |
!!! | CGATGCTGTTTTTGCACATA+CGG | + | chr4.1:1190400-1190419 | MS.gene015610:intron | 40.0% |
AACCGTGGATACTTTCCTGA+GGG | + | chr4.1:1192298-1192317 | MS.gene015610:CDS | 45.0% | |
AACTTAAGTCCTCCGGTGAT+TGG | - | chr4.1:1190536-1190555 | None:intergenic | 45.0% | |
AAGTCTTCCAGTGAGAAGGA+TGG | + | chr4.1:1194203-1194222 | MS.gene015610:CDS | 45.0% | |
AATATGCTTGCAACTCCCTC+TGG | - | chr4.1:1191706-1191725 | None:intergenic | 45.0% | |
AATTGCACCCATCTTGCTCA+TGG | - | chr4.1:1193763-1193782 | None:intergenic | 45.0% | |
ACAATCTGGTCGATAGCTTC+TGG | + | chr4.1:1189670-1189689 | MS.gene015610:CDS | 45.0% | |
ACAGCACAAACCCTAATGCT+AGG | - | chr4.1:1193254-1193273 | None:intergenic | 45.0% | |
AGAGGGAGTTGCAAGCATAT+TGG | + | chr4.1:1191705-1191724 | MS.gene015610:CDS | 45.0% | |
AGATGCTGGATTTCGTCTCA+TGG | + | chr4.1:1190583-1190602 | MS.gene015610:intron | 45.0% | |
AGCTATCGACCAGATTGTTG+AGG | - | chr4.1:1189668-1189687 | None:intergenic | 45.0% | |
AGGAAAGTCTTCCAGTGAGA+AGG | + | chr4.1:1194199-1194218 | MS.gene015610:CDS | 45.0% | |
ATCGACCAGATTGTTGAGGT+TGG | - | chr4.1:1189664-1189683 | None:intergenic | 45.0% | |
ATGCACCATGTTGAATGACC+TGG | - | chr4.1:1192733-1192752 | None:intergenic | 45.0% | |
ATGTTCTTGGATGAGCCAGA+GGG | + | chr4.1:1191688-1191707 | MS.gene015610:CDS | 45.0% | |
ATTCATGCCAACCATGGAGA+GGG | + | chr4.1:1192591-1192610 | MS.gene015610:CDS | 45.0% | |
ATTGTTTGATGCCCTCTCCA+TGG | - | chr4.1:1192605-1192624 | None:intergenic | 45.0% | |
CAAAGGCTCCAGCAAAGATA+TGG | - | chr4.1:1193526-1193545 | None:intergenic | 45.0% | |
CATAGAGGTCATTTGCAGCA+GGG | + | chr4.1:1192477-1192496 | MS.gene015610:CDS | 45.0% | |
CATAGCAATGGCTATGGTCA+TGG | + | chr4.1:1193584-1193603 | MS.gene015610:CDS | 45.0% | |
CATCTCCACAGACTGCTTTA+TGG | - | chr4.1:1192219-1192238 | None:intergenic | 45.0% | |
CTGAGTAGAATCTGCATCAC+TGG | - | chr4.1:1191887-1191906 | None:intergenic | 45.0% | |
GAAGACCATAAAGCAGTCTG+TGG | + | chr4.1:1192211-1192230 | MS.gene015610:CDS | 45.0% | |
GAAGCCGGGTACAATCAAAA+AGG | - | chr4.1:1190509-1190528 | None:intergenic | 45.0% | |
GACCATAGCCATTGCTATGA+GGG | - | chr4.1:1193583-1193602 | None:intergenic | 45.0% | |
GAGAATACAGACAGGAGGTA+AGG | + | chr4.1:1191302-1191321 | MS.gene015610:intron | 45.0% | |
GAGGATACCATGAGCAAGAT+GGG | + | chr4.1:1193753-1193772 | MS.gene015610:CDS | 45.0% | |
GATAGGAGGGAAACAATTCG+AGG | - | chr4.1:1193423-1193442 | None:intergenic | 45.0% | |
GATGAAGAACTCTGCAATCC+TGG | - | chr4.1:1194634-1194653 | None:intergenic | 45.0% | |
GATGTGTACTCGAATGGTTG+AGG | - | chr4.1:1194688-1194707 | None:intergenic | 45.0% | |
GCAGAGTTCTTCATCAGCAA+TGG | + | chr4.1:1194639-1194658 | MS.gene015610:CDS | 45.0% | |
GCAGATTCTACTCAGAATGC+TGG | + | chr4.1:1191892-1191911 | MS.gene015610:CDS | 45.0% | |
GCCAATGCAATAATGCATGC+TGG | + | chr4.1:1192272-1192291 | MS.gene015610:CDS | 45.0% | |
GGTTGAGCAGAGCTACTAAT+TGG | + | chr4.1:1192418-1192437 | MS.gene015610:CDS | 45.0% | |
GGTTTACGGAAGAGAAGAAG+AGG | + | chr4.1:1193059-1193078 | MS.gene015610:CDS | 45.0% | |
GTGAATCTTCAGGGAGATGT+GGG | - | chr4.1:1189634-1189653 | None:intergenic | 45.0% | |
TAGTGAGGCCATATCTTTGC+TGG | + | chr4.1:1193515-1193534 | MS.gene015610:CDS | 45.0% | |
TATCAAAGTAGACCCGAGAC+TGG | + | chr4.1:1191007-1191026 | MS.gene015610:CDS | 45.0% | |
TATCAGTATGGGCCTACTCA+TGG | + | chr4.1:1192859-1192878 | MS.gene015610:CDS | 45.0% | |
TATGGCCAGGTCATTCAACA+TGG | + | chr4.1:1192725-1192744 | MS.gene015610:intron | 45.0% | |
TATGTTCTTGGATGAGCCAG+AGG | + | chr4.1:1191687-1191706 | MS.gene015610:CDS | 45.0% | |
TCCACAATTGCTTCCAGTCT+CGG | - | chr4.1:1191023-1191042 | None:intergenic | 45.0% | |
TCCCCTGTTTGATGTTTCAC+AGG | + | chr4.1:1190705-1190724 | MS.gene015610:CDS | 45.0% | |
TCCGTCATTGGAACATCATC+TGG | - | chr4.1:1191928-1191947 | None:intergenic | 45.0% | |
TCTCTCCAACCTCAACAATC+TGG | + | chr4.1:1189656-1189675 | MS.gene015610:CDS | 45.0% | |
TGACCATAGCCATTGCTATG+AGG | - | chr4.1:1193584-1193603 | None:intergenic | 45.0% | |
TGAGGATACCATGAGCAAGA+TGG | + | chr4.1:1193752-1193771 | MS.gene015610:CDS | 45.0% | |
TGCATGTCTAGGTCTTGGAT+TGG | + | chr4.1:1192748-1192767 | MS.gene015610:CDS | 45.0% | |
TGCCATTGAATGCAGGAGAT+TGG | + | chr4.1:1191189-1191208 | MS.gene015610:CDS | 45.0% | |
TGGCATAAATGGTAGCACTG+TGG | - | chr4.1:1192256-1192275 | None:intergenic | 45.0% | |
TGGTATCCTCATGCTTGTCA+AGG | - | chr4.1:1193743-1193762 | None:intergenic | 45.0% | |
TTACGGAAGAGAAGAAGAGG+CGG | + | chr4.1:1193062-1193081 | MS.gene015610:CDS | 45.0% | |
TTATGGTGGCATGTATGCAC+TGG | + | chr4.1:1193131-1193150 | MS.gene015610:CDS | 45.0% | |
TTCAGACCGATTAAAGCCGT+TGG | - | chr4.1:1193945-1193964 | None:intergenic | 45.0% | |
TTCTGACATGCGTGTATTCC+AGG | + | chr4.1:1193697-1193716 | MS.gene015610:intron | 45.0% | |
TTCTTCATCAGCAATGGCTG+TGG | + | chr4.1:1194645-1194664 | MS.gene015610:CDS | 45.0% | |
TTGGGCCAAATTCAGTGCAA+CGG | + | chr4.1:1192437-1192456 | MS.gene015610:CDS | 45.0% | |
TTTCTTACTAGCCCTGGCTT+TGG | - | chr4.1:1194108-1194127 | None:intergenic | 45.0% | |
! | ATCTCTAGGAACTGCTGATG+AGG | + | chr4.1:1192772-1192791 | MS.gene015610:CDS | 45.0% |
! | ATGTGAGTGATGATGTCAGG+AGG | + | chr4.1:1193220-1193239 | MS.gene015610:CDS | 45.0% |
! | CTGATGTGAGTGATGATGTC+AGG | + | chr4.1:1193217-1193236 | MS.gene015610:CDS | 45.0% |
! | GAATCTGCATCACTGGGTTT+TGG | - | chr4.1:1191880-1191899 | None:intergenic | 45.0% |
! | GACTTTCCTTTTCCAGCACT+TGG | - | chr4.1:1194188-1194207 | None:intergenic | 45.0% |
! | GAGCAAGATGGGTGCAATTT+TGG | + | chr4.1:1193764-1193783 | MS.gene015610:CDS | 45.0% |
! | GATGATGTTCCAATGACGGA+CGG | + | chr4.1:1191928-1191947 | MS.gene015610:CDS | 45.0% |
! | GGCTCTGATTTCTTCTCTGT+TGG | - | chr4.1:1194400-1194419 | None:intergenic | 45.0% |
! | TACACTGATAGTGCTGTTGC+CGG | + | chr4.1:1192824-1192843 | MS.gene015610:CDS | 45.0% |
! | TGTGTGGCTGTAGTCTGTTT+TGG | + | chr4.1:1193353-1193372 | MS.gene015610:intron | 45.0% |
! | TTTGCTGGAGCCTTTGACTT+CGG | + | chr4.1:1193530-1193549 | MS.gene015610:CDS | 45.0% |
!! | AAGCTTGGCCTTTTCACCAA+CGG | + | chr4.1:1193926-1193945 | MS.gene015610:CDS | 45.0% |
!! | AGCTCTGGGAATTGCTCTTA+CGG | + | chr4.1:1193038-1193057 | MS.gene015610:CDS | 45.0% |
!! | ATGATGTTCCAATGACGGAC+GGG | + | chr4.1:1191929-1191948 | MS.gene015610:CDS | 45.0% |
!! | ATGTTTCAGAGGGTTAGCTC+TGG | + | chr4.1:1193023-1193042 | MS.gene015610:intron | 45.0% |
!! | CAGTTAAGTTGGCACCTTCA+GGG | + | chr4.1:1194512-1194531 | MS.gene015610:CDS | 45.0% |
!! | GGACTTGGTGTTATCCATAG+AGG | + | chr4.1:1192462-1192481 | MS.gene015610:CDS | 45.0% |
!! | TACTGCTACTGACTCACGAT+AGG | + | chr4.1:1189973-1189992 | MS.gene015610:intron | 45.0% |
!! | TGTTTCAGAGGGTTAGCTCT+GGG | + | chr4.1:1193024-1193043 | MS.gene015610:intron | 45.0% |
!! | TTCCCTCAGGAAAGTATCCA+CGG | - | chr4.1:1192303-1192322 | None:intergenic | 45.0% |
!! | TTTGGCTCTACGGACTCTAA+AGG | - | chr4.1:1191862-1191881 | None:intergenic | 45.0% |
!!! | ATCACTGGGTTTTGGCTCTA+CGG | - | chr4.1:1191872-1191891 | None:intergenic | 45.0% |
!! | TCTAATAAAATATTATTAAA+AGG | - | chr4.1:1192104-1192123 | None:intergenic | 5.0% |
AATGCATGCTGGAACAACCG+TGG | + | chr4.1:1192283-1192302 | MS.gene015610:CDS | 50.0% | |
ACTCAGAATGCTGGTGTGAG+TGG | + | chr4.1:1191901-1191920 | MS.gene015610:CDS | 50.0% | |
AGGACAGAACTAACCTGCTC+TGG | - | chr4.1:1193285-1193304 | None:intergenic | 50.0% | |
AGTATGGGCCTACTCATGGT+TGG | + | chr4.1:1192863-1192882 | MS.gene015610:CDS | 50.0% | |
ATCAGCAATGGCTGTGGATG+AGG | + | chr4.1:1194651-1194670 | MS.gene015610:CDS | 50.0% | |
ATCAGCTAAGGCCAAAGCCA+GGG | + | chr4.1:1194094-1194113 | MS.gene015610:CDS | 50.0% | |
ATTCGAGGAGTCTGCAGTGT+AGG | - | chr4.1:1193408-1193427 | None:intergenic | 50.0% | |
ATTCGCGTGTTGGAACCTTC+AGG | + | chr4.1:1193628-1193647 | MS.gene015610:CDS | 50.0% | |
CAACCGTGGATACTTTCCTG+AGG | + | chr4.1:1192297-1192316 | MS.gene015610:CDS | 50.0% | |
CATGGTGCATGTCTAGGTCT+TGG | + | chr4.1:1192743-1192762 | MS.gene015610:CDS | 50.0% | |
CATTTCTTCCGCCAGCATCA+AGG | - | chr4.1:1193800-1193819 | None:intergenic | 50.0% | |
CCACAATTGCTTCCAGTCTC+GGG | - | chr4.1:1191022-1191041 | None:intergenic | 50.0% | |
CCAGAGAAGCCGTGGTTTAA+CGG | - | chr4.1:1192981-1193000 | None:intergenic | 50.0% | |
CCATAGAGGTCATTTGCAGC+AGG | + | chr4.1:1192476-1192495 | MS.gene015610:CDS | 50.0% | |
CCGGCTTCTAAACCAATCAC+CGG | + | chr4.1:1190521-1190540 | MS.gene015610:intron | 50.0% | |
CCTGCTGCAAATGACCTCTA+TGG | - | chr4.1:1192479-1192498 | None:intergenic | 50.0% | |
CGTGAATCTTCAGGGAGATG+TGG | - | chr4.1:1189635-1189654 | None:intergenic | 50.0% | |
CGTGTATTCCAGGCGACAAT+TGG | + | chr4.1:1193707-1193726 | MS.gene015610:intron | 50.0% | |
CGTGTTGGAACCTTCAGGTA+AGG | + | chr4.1:1193633-1193652 | MS.gene015610:intron | 50.0% | |
CTCAGCTTTCTTACTAGCCC+TGG | - | chr4.1:1194114-1194133 | None:intergenic | 50.0% | |
CTCGGCAATCCGTTAAACCA+CGG | + | chr4.1:1192969-1192988 | MS.gene015610:intron | 50.0% | |
CTTGGAGCTGATGTAGAGTC+AGG | - | chr4.1:1194170-1194189 | None:intergenic | 50.0% | |
GAAGCTAGTGATTCGCGTGT+TGG | + | chr4.1:1193618-1193637 | MS.gene015610:CDS | 50.0% | |
GACTCACTATCCTATGCCCT+TGG | + | chr4.1:1190676-1190695 | MS.gene015610:CDS | 50.0% | |
GAGGCTGCTGGTATCAGTAT+GGG | + | chr4.1:1192848-1192867 | MS.gene015610:CDS | 50.0% | |
GATTCATGCCAACCATGGAG+AGG | + | chr4.1:1192590-1192609 | MS.gene015610:CDS | 50.0% | |
GCAAGAACTTCAGGCTCAGT+AGG | - | chr4.1:1194562-1194581 | None:intergenic | 50.0% | |
GCATCTACGACATCAACTGC+TGG | + | chr4.1:1194598-1194617 | MS.gene015610:CDS | 50.0% | |
GCTTCTAAACCAATCACCGG+AGG | + | chr4.1:1190524-1190543 | MS.gene015610:intron | 50.0% | |
GGAACACTTGTGGAGATCTC+TGG | - | chr4.1:1189696-1189715 | None:intergenic | 50.0% | |
GGTAGTCCATACTCAGAAGG+TGG | + | chr4.1:1192546-1192565 | MS.gene015610:CDS | 50.0% | |
GGTCTGATTCATGCCAACCA+TGG | + | chr4.1:1192585-1192604 | MS.gene015610:CDS | 50.0% | |
GGTGGTAGTCCATACTCAGA+AGG | + | chr4.1:1192543-1192562 | MS.gene015610:CDS | 50.0% | |
GGTTGGAACAGGCAGTGATA+AGG | + | chr4.1:1192880-1192899 | MS.gene015610:CDS | 50.0% | |
GTGTACTCGAATGGTTGAGG+AGG | - | chr4.1:1194685-1194704 | None:intergenic | 50.0% | |
GTTGGCATGAATCAGACCGA+GGG | - | chr4.1:1192583-1192602 | None:intergenic | 50.0% | |
TCCAGCCGTTGCACTGAATT+TGG | - | chr4.1:1192445-1192464 | None:intergenic | 50.0% | |
TCGAATGGTTGAGGAGGTTG+AGG | - | chr4.1:1194679-1194698 | None:intergenic | 50.0% | |
TCTACATCAGCTCCAAGTGC+TGG | + | chr4.1:1194173-1194192 | MS.gene015610:CDS | 50.0% | |
TCTACGACATCAACTGCTGG+CGG | + | chr4.1:1194601-1194620 | MS.gene015610:CDS | 50.0% | |
TGAGCAGATGACTCGAGATC+AGG | + | chr4.1:1193095-1193114 | MS.gene015610:CDS | 50.0% | |
TGAGGCTGCTGGTATCAGTA+TGG | + | chr4.1:1192847-1192866 | MS.gene015610:CDS | 50.0% | |
TGCCCTCATAGCAATGGCTA+TGG | + | chr4.1:1193578-1193597 | MS.gene015610:CDS | 50.0% | |
TGCCTGTTCCAACCATGAGT+AGG | - | chr4.1:1192874-1192893 | None:intergenic | 50.0% | |
TGGGAACTGCCATTGAATGC+AGG | + | chr4.1:1191182-1191201 | MS.gene015610:CDS | 50.0% | |
TTCTGCTGTCAATGTGCCTG+AGG | + | chr4.1:1191960-1191979 | MS.gene015610:CDS | 50.0% | |
TTTGATGCCCTCTCCATGGT+TGG | - | chr4.1:1192601-1192620 | None:intergenic | 50.0% | |
! | AGAGCACCACCTTCTGAGTA+TGG | - | chr4.1:1192555-1192574 | None:intergenic | 50.0% |
! | CAGGGCTAGTAAGAAAGCTG+AGG | + | chr4.1:1194112-1194131 | MS.gene015610:CDS | 50.0% |
! | GCAGTTGATGTCGTAGATGC+AGG | - | chr4.1:1194598-1194617 | None:intergenic | 50.0% |
! | GGAGAGAGCGTGAATCTTCA+GGG | - | chr4.1:1189643-1189662 | None:intergenic | 50.0% |
! | TGATGATGTCAGGAGGACTG+CGG | + | chr4.1:1193227-1193246 | MS.gene015610:CDS | 50.0% |
! | TGGAGAGAGCGTGAATCTTC+AGG | - | chr4.1:1189644-1189663 | None:intergenic | 50.0% |
! | TGGCAGTTCCCATAGCTTGT+TGG | - | chr4.1:1191174-1191193 | None:intergenic | 50.0% |
!! | ATGGGTGCAATTTTGGCCTC+CGG | + | chr4.1:1193771-1193790 | MS.gene015610:CDS | 50.0% |
!! | CCAGTTAAGTTGGCACCTTC+AGG | + | chr4.1:1194511-1194530 | MS.gene015610:CDS | 50.0% |
!! | CCGGTGATTGGTTTAGAAGC+CGG | - | chr4.1:1190524-1190543 | None:intergenic | 50.0% |
!! | CCTGAAGGTGCCAACTTAAC+TGG | - | chr4.1:1194514-1194533 | None:intergenic | 50.0% |
!! | CGGTGATTGGTTTAGAAGCC+GGG | - | chr4.1:1190523-1190542 | None:intergenic | 50.0% |
!! | GGTCTTGGATTGGCATCTCT+AGG | + | chr4.1:1192758-1192777 | MS.gene015610:CDS | 50.0% |
!! | TCAGCTCCAAGTGCTGGAAA+AGG | + | chr4.1:1194179-1194198 | MS.gene015610:CDS | 50.0% |
!! | TGATGTTCCAATGACGGACG+GGG | + | chr4.1:1191930-1191949 | MS.gene015610:CDS | 50.0% |
!! | TGGCATGTATGCACTGGCTT+TGG | + | chr4.1:1193137-1193156 | MS.gene015610:CDS | 50.0% |
AAACAGGGGACCAGCTCCAA+GGG | - | chr4.1:1190695-1190714 | None:intergenic | 55.0% | |
ACTAAGACCTGTACCCGCAC+AGG | - | chr4.1:1193499-1193518 | None:intergenic | 55.0% | |
ACTGATACCAGCAGCCTCAC+CGG | - | chr4.1:1192846-1192865 | None:intergenic | 55.0% | |
AGCAAGAGTGGTTCCTGCTC+AGG | + | chr4.1:1194450-1194469 | MS.gene015610:CDS | 55.0% | |
AGGACTGCGGTCCTAGCATT+AGG | + | chr4.1:1193240-1193259 | MS.gene015610:CDS | 55.0% | |
CATCAGCTAAGGCCAAAGCC+AGG | + | chr4.1:1194093-1194112 | MS.gene015610:CDS | 55.0% | |
CCCGAGACTGGAAGCAATTG+TGG | + | chr4.1:1191019-1191038 | MS.gene015610:CDS | 55.0% | |
CCGTTAAACCACGGCTTCTC+TGG | + | chr4.1:1192978-1192997 | MS.gene015610:intron | 55.0% | |
CTACGACATCAACTGCTGGC+GGG | + | chr4.1:1194602-1194621 | MS.gene015610:CDS | 55.0% | |
CTATCCTATGCCCTTGGAGC+TGG | + | chr4.1:1190682-1190701 | MS.gene015610:CDS | 55.0% | |
GAAGGATGGAGAAGCCATGC+AGG | + | chr4.1:1194217-1194236 | MS.gene015610:CDS | 55.0% | |
GAGGTCATTTGCAGCAGGGA+AGG | + | chr4.1:1192481-1192500 | MS.gene015610:CDS | 55.0% | |
GCCAAATTCAGTGCAACGGC+TGG | + | chr4.1:1192441-1192460 | MS.gene015610:CDS | 55.0% | |
GCTGCTCCGTAACGAACATG+TGG | - | chr4.1:1193459-1193478 | None:intergenic | 55.0% | |
GCTGTACTCTGATCCAGAGC+AGG | + | chr4.1:1193269-1193288 | MS.gene015610:CDS | 55.0% | |
GGACTGCGGTCCTAGCATTA+GGG | + | chr4.1:1193241-1193260 | MS.gene015610:CDS | 55.0% | |
GGCACATTGACAGCAGAAGC+TGG | - | chr4.1:1191958-1191977 | None:intergenic | 55.0% | |
GGCCTACTCATGGTTGGAAC+AGG | + | chr4.1:1192869-1192888 | MS.gene015610:CDS | 55.0% | |
GGCTTCTCCATCCTTCTCAC+TGG | - | chr4.1:1194213-1194232 | None:intergenic | 55.0% | |
GGTGGTGCTCTTTATGCCCT+CGG | + | chr4.1:1192564-1192583 | MS.gene015610:CDS | 55.0% | |
GGTTGGCATGAATCAGACCG+AGG | - | chr4.1:1192584-1192603 | None:intergenic | 55.0% | |
GTGGGAACAGTCGTAGGCTT+GGG | - | chr4.1:1194032-1194051 | None:intergenic | 55.0% | |
TATCAGAGCCAGAGAAGCCG+TGG | - | chr4.1:1192989-1193008 | None:intergenic | 55.0% | |
TCCGCCAGCATCAAGGATTC+CGG | - | chr4.1:1193793-1193812 | None:intergenic | 55.0% | |
TCCGGAATCCTTGATGCTGG+CGG | + | chr4.1:1193789-1193808 | MS.gene015610:CDS | 55.0% | |
TCGTGCTGCGCAAGCTATCA+CGG | - | chr4.1:1192632-1192651 | None:intergenic | 55.0% | |
TGAGCAGGAACCACTCTTGC+TGG | - | chr4.1:1194451-1194470 | None:intergenic | 55.0% | |
TGCGGGTACAGGTCTTAGTG+AGG | + | chr4.1:1193500-1193519 | MS.gene015610:CDS | 55.0% | |
TGCTGTGGGCATTTCCTGTG+CGG | + | chr4.1:1193482-1193501 | MS.gene015610:CDS | 55.0% | |
TGGGAACAGTCGTAGGCTTG+GGG | - | chr4.1:1194031-1194050 | None:intergenic | 55.0% | |
TTACGGAGCAGCTCTTGCTG+TGG | + | chr4.1:1193467-1193486 | MS.gene015610:CDS | 55.0% | |
TTCAGTGCAACGGCTGGACT+TGG | + | chr4.1:1192447-1192466 | MS.gene015610:CDS | 55.0% | |
! | GTAGTGGTGGGAACAGTCGT+AGG | - | chr4.1:1194038-1194057 | None:intergenic | 55.0% |
! | TACGGAGCAGCTCTTGCTGT+GGG | + | chr4.1:1193468-1193487 | MS.gene015610:CDS | 55.0% |
! | TCAGGGTGCCCTCATAGCAA+TGG | + | chr4.1:1193572-1193591 | MS.gene015610:CDS | 55.0% |
! | TGATAGTGCTGTTGCCGGTG+AGG | + | chr4.1:1192829-1192848 | MS.gene015610:CDS | 55.0% |
!! | GCACTGGCTTTGGCGTATAG+CGG | + | chr4.1:1193147-1193166 | MS.gene015610:CDS | 55.0% |
ACGACGTTGGTCAGCTCAGC+CGG | + | chr4.1:1189582-1189601 | MS.gene015610:CDS | 60.0% | |
AGGGGGTAACTCGGGACAAG+AGG | - | chr4.1:1193323-1193342 | None:intergenic | 60.0% | |
AGTCCCACCCTGAGGCAAGT+AGG | - | chr4.1:1192520-1192539 | None:intergenic | 60.0% | |
ATGGCGCCCTACTTGCCTCA+GGG | + | chr4.1:1192510-1192529 | MS.gene015610:CDS | 60.0% | |
CAAACAGGGGACCAGCTCCA+AGG | - | chr4.1:1190696-1190715 | None:intergenic | 60.0% | |
CAGCATGGCCAACATGCCAC+CGG | - | chr4.1:1189604-1189623 | None:intergenic | 60.0% | |
CTTGCGCAGCACGACTGTTG+AGG | + | chr4.1:1192638-1192657 | MS.gene015610:CDS | 60.0% | |
GATGTGGGACTCGTGCAGCA+TGG | - | chr4.1:1189619-1189638 | None:intergenic | 60.0% | |
GCAGCAGGGAAGGTCACTGA+TGG | + | chr4.1:1192491-1192510 | MS.gene015610:CDS | 60.0% | |
GCCAGCATCAAGGATTCCGG+AGG | - | chr4.1:1193790-1193809 | None:intergenic | 60.0% | |
GCCTCCGGAATCCTTGATGC+TGG | + | chr4.1:1193786-1193805 | MS.gene015610:CDS | 60.0% | |
GCTGTGGGCATTTCCTGTGC+GGG | + | chr4.1:1193483-1193502 | MS.gene015610:CDS | 60.0% | |
GGCATTTCCTGTGCGGGTAC+AGG | + | chr4.1:1193489-1193508 | MS.gene015610:CDS | 60.0% | |
GGTGGGAACAGTCGTAGGCT+TGG | - | chr4.1:1194033-1194052 | None:intergenic | 60.0% | |
GTCCCACCCTGAGGCAAGTA+GGG | - | chr4.1:1192519-1192538 | None:intergenic | 60.0% | |
TACTTGCCTCAGGGTGGGAC+TGG | + | chr4.1:1192519-1192538 | MS.gene015610:CDS | 60.0% | |
TGCTGCGCAAGCTATCACGG+AGG | - | chr4.1:1192629-1192648 | None:intergenic | 60.0% | |
! | ACATCAACTGCTGGCGGGTC+AGG | + | chr4.1:1194607-1194626 | MS.gene015610:CDS | 60.0% |
ACGTTGGTCAGCTCAGCCGG+TGG | + | chr4.1:1189585-1189604 | MS.gene015610:CDS | 65.0% | |
CAGCTCAGCCGGTGGCATGT+TGG | + | chr4.1:1189593-1189612 | MS.gene015610:CDS | 65.0% | |
CGCCCTACTTGCCTCAGGGT+GGG | + | chr4.1:1192514-1192533 | MS.gene015610:CDS | 65.0% | |
GATGGCGCCCTACTTGCCTC+AGG | + | chr4.1:1192509-1192528 | MS.gene015610:CDS | 65.0% | |
TTGCCTCAGGGTGGGACTGG+TGG | + | chr4.1:1192522-1192541 | MS.gene015610:CDS | 65.0% | |
! | GCTGGTTCCCCGTCCGTCAT+TGG | - | chr4.1:1191940-1191959 | None:intergenic | 65.0% |
! | GGGACCAGCTCCAAGGGCAT+AGG | - | chr4.1:1190689-1190708 | None:intergenic | 65.0% |
CCACCACCAGTCCCACCCTG+AGG | - | chr4.1:1192528-1192547 | None:intergenic | 70.0% | |
GCGCCCTACTTGCCTCAGGG+TGG | + | chr4.1:1192513-1192532 | MS.gene015610:CDS | 70.0% | |
GCTGTTGCCGGTGAGGCTGC+TGG | + | chr4.1:1192836-1192855 | MS.gene015610:CDS | 70.0% | |
! | ACTGCTGGCGGGTCAGGACC+AGG | + | chr4.1:1194613-1194632 | MS.gene015610:CDS | 70.0% |
! | CCTCAGGGTGGGACTGGTGG+TGG | + | chr4.1:1192525-1192544 | MS.gene015610:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 1189576 | 1194711 | 1189576 | ID=MS.gene015610 |
chr4.1 | mRNA | 1189576 | 1194711 | 1189576 | ID=MS.gene015610.t1;Parent=MS.gene015610 |
chr4.1 | exon | 1189576 | 1189721 | 1189576 | ID=MS.gene015610.t1.exon1;Parent=MS.gene015610.t1 |
chr4.1 | CDS | 1189576 | 1189721 | 1189576 | ID=cds.MS.gene015610.t1;Parent=MS.gene015610.t1 |
chr4.1 | exon | 1190277 | 1190346 | 1190277 | ID=MS.gene015610.t1.exon2;Parent=MS.gene015610.t1 |
chr4.1 | CDS | 1190277 | 1190346 | 1190277 | ID=cds.MS.gene015610.t1;Parent=MS.gene015610.t1 |
chr4.1 | exon | 1190649 | 1190754 | 1190649 | ID=MS.gene015610.t1.exon3;Parent=MS.gene015610.t1 |
chr4.1 | CDS | 1190649 | 1190754 | 1190649 | ID=cds.MS.gene015610.t1;Parent=MS.gene015610.t1 |
chr4.1 | exon | 1190955 | 1191057 | 1190955 | ID=MS.gene015610.t1.exon4;Parent=MS.gene015610.t1 |
chr4.1 | CDS | 1190955 | 1191057 | 1190955 | ID=cds.MS.gene015610.t1;Parent=MS.gene015610.t1 |
chr4.1 | exon | 1191150 | 1191318 | 1191150 | ID=MS.gene015610.t1.exon5;Parent=MS.gene015610.t1 |
chr4.1 | CDS | 1191150 | 1191318 | 1191150 | ID=cds.MS.gene015610.t1;Parent=MS.gene015610.t1 |
chr4.1 | exon | 1191616 | 1192088 | 1191616 | ID=MS.gene015610.t1.exon6;Parent=MS.gene015610.t1 |
chr4.1 | CDS | 1191616 | 1192088 | 1191616 | ID=cds.MS.gene015610.t1;Parent=MS.gene015610.t1 |
chr4.1 | exon | 1192193 | 1192328 | 1192193 | ID=MS.gene015610.t1.exon7;Parent=MS.gene015610.t1 |
chr4.1 | CDS | 1192193 | 1192328 | 1192193 | ID=cds.MS.gene015610.t1;Parent=MS.gene015610.t1 |
chr4.1 | exon | 1192414 | 1192659 | 1192414 | ID=MS.gene015610.t1.exon8;Parent=MS.gene015610.t1 |
chr4.1 | CDS | 1192414 | 1192659 | 1192414 | ID=cds.MS.gene015610.t1;Parent=MS.gene015610.t1 |
chr4.1 | exon | 1192734 | 1192954 | 1192734 | ID=MS.gene015610.t1.exon9;Parent=MS.gene015610.t1 |
chr4.1 | CDS | 1192734 | 1192954 | 1192734 | ID=cds.MS.gene015610.t1;Parent=MS.gene015610.t1 |
chr4.1 | exon | 1193032 | 1193290 | 1193032 | ID=MS.gene015610.t1.exon10;Parent=MS.gene015610.t1 |
chr4.1 | CDS | 1193032 | 1193290 | 1193032 | ID=cds.MS.gene015610.t1;Parent=MS.gene015610.t1 |
chr4.1 | exon | 1193417 | 1193649 | 1193417 | ID=MS.gene015610.t1.exon11;Parent=MS.gene015610.t1 |
chr4.1 | CDS | 1193417 | 1193649 | 1193417 | ID=cds.MS.gene015610.t1;Parent=MS.gene015610.t1 |
chr4.1 | exon | 1193719 | 1194238 | 1193719 | ID=MS.gene015610.t1.exon12;Parent=MS.gene015610.t1 |
chr4.1 | CDS | 1193719 | 1194238 | 1193719 | ID=cds.MS.gene015610.t1;Parent=MS.gene015610.t1 |
chr4.1 | exon | 1194388 | 1194711 | 1194388 | ID=MS.gene015610.t1.exon13;Parent=MS.gene015610.t1 |
chr4.1 | CDS | 1194388 | 1194711 | 1194388 | ID=cds.MS.gene015610.t1;Parent=MS.gene015610.t1 |
Gene Sequence |
Protein sequence |