Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058594.t1 | XP_003631011.1 | 98.8 | 965 | 12 | 0 | 1 | 965 | 1 | 965 | 0.00E+00 | 1712.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058594.t1 | O48844 | 85.2 | 970 | 134 | 5 | 1 | 964 | 1 | 966 | 0.0e+00 | 1509.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058594.t1 | G7LCC0 | 98.8 | 965 | 12 | 0 | 1 | 965 | 1 | 965 | 0.0e+00 | 1712.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene57118 | MS.gene058594 | PPI |
MS.gene06206 | MS.gene058594 | PPI |
MS.gene95863 | MS.gene058594 | PPI |
MS.gene058594 | MS.gene20187 | PPI |
MS.gene048987 | MS.gene058594 | PPI |
MS.gene62646 | MS.gene058594 | PPI |
MS.gene55853 | MS.gene058594 | PPI |
MS.gene058594 | MS.gene015610 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058594.t1 | MTR_8g106120 | 99.301 | 1001 | 7 | 0 | 1 | 1001 | 1 | 1001 | 0.0 | 2037 |
MS.gene058594.t1 | MTR_2g067250 | 97.303 | 1001 | 25 | 1 | 1 | 1001 | 1 | 999 | 0.0 | 1998 |
MS.gene058594.t1 | MTR_8g106120 | 99.358 | 779 | 5 | 0 | 223 | 1001 | 1 | 779 | 0.0 | 1582 |
MS.gene058594.t1 | MTR_8g106120 | 99.445 | 721 | 4 | 0 | 1 | 721 | 1 | 721 | 0.0 | 1476 |
MS.gene058594.t1 | MTR_3g009940 | 77.037 | 270 | 15 | 2 | 1 | 270 | 1 | 223 | 3.11e-131 | 400 |
MS.gene058594.t1 | MTR_3g009940 | 77.698 | 139 | 9 | 2 | 694 | 832 | 224 | 340 | 6.31e-62 | 215 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058594.t1 | AT2G32730 | 84.341 | 1009 | 145 | 9 | 1 | 1001 | 1 | 1004 | 0.0 | 1674 |
MS.gene058594.t1 | AT1G04810 | 81.621 | 1012 | 163 | 8 | 1 | 1001 | 1 | 1000 | 0.0 | 1632 |
Find 268 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACTTTCCTGAGGGAAAATT+TGG | 0.159807 | 4.4:+1397068 | MS.gene058594:CDS |
TCCAGCCGTTGCACTGAATT+TGG | 0.186516 | 4.4:-1397201 | None:intergenic |
CATTATTGCATTGGCATAAA+TGG | 0.189798 | 4.4:-1397025 | None:intergenic |
GAGCAAGATGGGTGCAATTT+TGG | 0.199961 | 4.4:+1398526 | MS.gene058594:CDS |
CCAGTTAAGTTGGCACCTTC+AGG | 0.213525 | 4.4:+1399273 | MS.gene058594:CDS |
CATCTCCACAGACTGCTTTA+TGG | 0.226890 | 4.4:-1396977 | None:intergenic |
TTGTCAGTGTCTTATGTTCT+TGG | 0.227488 | 4.4:+1396436 | MS.gene058594:CDS |
GGTTGAGCAGAGCTACTAAT+TGG | 0.236302 | 4.4:+1397177 | MS.gene058594:CDS |
AAACAAAGATGATGCTCTTT+TGG | 0.252990 | 4.4:+1396508 | MS.gene058594:CDS |
TCCACAATTGCTTCCAGTCT+TGG | 0.278640 | 4.4:-1395780 | None:intergenic |
GACTATGTCCATACTCTTCT+AGG | 0.285306 | 4.4:+1395493 | MS.gene058594:CDS |
TAGTGAGGCCATATCTTTAC+TGG | 0.288740 | 4.4:+1398277 | MS.gene058594:CDS |
TGGAGAGAGCGTGAATCTTC+AGG | 0.293532 | 4.4:-1394415 | None:intergenic |
GAGGGTACCAATACCAAAAT+TGG | 0.295987 | 4.4:-1398652 | None:intergenic |
GCTTTATGGTCTTCAAAATA+AGG | 0.300890 | 4.4:-1396963 | None:intergenic |
GGAATTGCTCTTACGGTTTA+CGG | 0.306338 | 4.4:+1397804 | MS.gene058594:CDS |
CCTGAAGGTGCCAACTTAAC+TGG | 0.312725 | 4.4:-1399273 | None:intergenic |
GAATCTGCATCACTGGGTTT+TGG | 0.319869 | 4.4:-1396638 | None:intergenic |
AGCTCTGATTTCTTCTCTGT+TGG | 0.328222 | 4.4:-1399159 | None:intergenic |
TACTTGCCTCAGGGTGGGAC+TGG | 0.339564 | 4.4:+1397278 | MS.gene058594:CDS |
TGAGAGGTTAAACAAAATAA+AGG | 0.344216 | 4.4:+1396766 | MS.gene058594:CDS |
TTTCTTACTAGCCCTGGCTT+TGG | 0.346140 | 4.4:-1398867 | None:intergenic |
AGGACTGCAGTCCTAGCATT+AGG | 0.347926 | 4.4:+1397999 | MS.gene058594:CDS |
ATGCCACCATAACGTAATAT+TGG | 0.348326 | 4.4:-1397879 | None:intergenic |
CCTGCTGCAAATGACCTCTA+TGG | 0.350310 | 4.4:-1397235 | None:intergenic |
CCACAATTGCTTCCAGTCTT+GGG | 0.351058 | 4.4:-1395779 | None:intergenic |
TGAGCAGGAACCACTCTTGC+TGG | 0.358571 | 4.4:-1399210 | None:intergenic |
TGAGGCTGCTGGTATCAGTA+TGG | 0.362240 | 4.4:+1397606 | MS.gene058594:CDS |
GTGGGAACAGTCGTAGGCTT+GGG | 0.369188 | 4.4:-1398791 | None:intergenic |
AGTCTTAGAAAGTAGTCTTA+TGG | 0.371639 | 4.4:-1398585 | None:intergenic |
CTCAGCTTTCTTACTAGCCC+TGG | 0.372570 | 4.4:-1398873 | None:intergenic |
GAAAACAGTCTCACTTGTTA+TGG | 0.376296 | 4.4:-1396841 | None:intergenic |
AGAGCACCACCTTCTGAGTA+TGG | 0.376878 | 4.4:-1397311 | None:intergenic |
TCCGCCAGCATCAAGGATTC+CGG | 0.379806 | 4.4:-1398552 | None:intergenic |
CGTGTATTCCAGGCGACAAT+TGG | 0.383184 | 4.4:+1398469 | MS.gene058594:intron |
TTTACTGGAGCCTTTGACTT+CGG | 0.384735 | 4.4:+1398292 | MS.gene058594:CDS |
ATATGCTAGTTTCAAGTCTA+AGG | 0.392598 | 4.4:+1395731 | MS.gene058594:CDS |
TGACAAATGCTCAGATAATC+TGG | 0.399990 | 4.4:-1396419 | None:intergenic |
ATTCGCGTGTTGGAACCTTC+AGG | 0.407002 | 4.4:+1398390 | MS.gene058594:CDS |
CAAAGGCTCCAGTAAAGATA+TGG | 0.414828 | 4.4:-1398285 | None:intergenic |
AATTCTCACCTAGAAGAGTA+TGG | 0.416307 | 4.4:-1395501 | None:intergenic |
TAGCGGAACAGCAAACAATA+AGG | 0.416651 | 4.4:+1397923 | MS.gene058594:CDS |
GGACTGCAGTCCTAGCATTA+GGG | 0.419036 | 4.4:+1398000 | MS.gene058594:CDS |
GCCTCCGGAATCCTTGATGC+TGG | 0.420374 | 4.4:+1398548 | MS.gene058594:CDS |
CTGAGTAGAATCTGCATCAC+TGG | 0.422471 | 4.4:-1396645 | None:intergenic |
CCTCAGGGTGGGACTGGTGG+TGG | 0.423831 | 4.4:+1397284 | MS.gene058594:CDS |
AGCAAGAGTGGTTCCTGCTC+AGG | 0.424076 | 4.4:+1399212 | MS.gene058594:CDS |
TTCAGTGCAACGGCTGGACT+TGG | 0.424201 | 4.4:+1397206 | MS.gene058594:CDS |
CAGTTAAGTTGGCACCTTCA+GGG | 0.424877 | 4.4:+1399274 | MS.gene058594:CDS |
TCAGTAATAGCAAGAACTTC+AGG | 0.425883 | 4.4:-1399330 | None:intergenic |
CTATCCTATGCCCTTGGAGC+TGG | 0.426899 | 4.4:+1395442 | MS.gene058594:CDS |
GGTATTTCCTGTGCGGGTAC+AGG | 0.428085 | 4.4:+1398251 | MS.gene058594:CDS |
AATCCTGTGAAACATCAAAC+AGG | 0.428256 | 4.4:-1395468 | None:intergenic |
GCTCTGATTTCTTCTCTGTT+GGG | 0.428613 | 4.4:-1399158 | None:intergenic |
TCTTATCTATTTCATAAGCT+TGG | 0.430502 | 4.4:+1398673 | MS.gene058594:CDS |
GGCCTACTCATGGTTGGAAC+AGG | 0.433364 | 4.4:+1397628 | MS.gene058594:CDS |
TCCCCTGTTTGATGTTTCAC+AGG | 0.436490 | 4.4:+1395465 | MS.gene058594:CDS |
TGCCATTGAATGCAGGAGAT+TGG | 0.436671 | 4.4:+1395949 | MS.gene058594:CDS |
GACTCTAAAGGTTGAGACTT+TGG | 0.437729 | 4.4:-1396608 | None:intergenic |
CAGATATGTTCCAGTTAAGT+TGG | 0.438153 | 4.4:+1399263 | MS.gene058594:CDS |
ACAATCTGGTCGATAGCTTC+TGG | 0.438425 | 4.4:+1394444 | MS.gene058594:CDS |
GGTGGGAACAGTCGTAGGCT+TGG | 0.440669 | 4.4:-1398792 | None:intergenic |
ATCCAATCTCCTGCATTCAA+TGG | 0.441331 | 4.4:-1395951 | None:intergenic |
GATTAAAGCCGTTGGTGAAA+AGG | 0.442049 | 4.4:-1398696 | None:intergenic |
ACATCAACTGCTGGTGGGTC+AGG | 0.443436 | 4.4:+1399369 | MS.gene058594:CDS |
ATCAGCAATGGCTGTGGATG+AGG | 0.444703 | 4.4:+1399413 | MS.gene058594:CDS |
GATGGCGCCCTACTTGCCTC+AGG | 0.446713 | 4.4:+1397268 | MS.gene058594:CDS |
TCCGCCATTGGAACATCATC+TGG | 0.447992 | 4.4:-1396686 | None:intergenic |
TGGAAAATACCAACAAGCTA+TGG | 0.449129 | 4.4:+1395922 | MS.gene058594:CDS |
TACACTGATAGTGCTGTTGC+CGG | 0.449237 | 4.4:+1397583 | MS.gene058594:CDS |
ACTTAAGATGTGTACTCAAA+TGG | 0.449817 | 4.4:-1399453 | None:intergenic |
GGAACACTTGTGGAGATCTC+TGG | 0.452349 | 4.4:-1394467 | None:intergenic |
TTTGTTAGAATCTCAAAAGT+AGG | 0.455024 | 4.4:-1399186 | None:intergenic |
TGAGACAAGAACTCAAACTT+TGG | 0.455764 | 4.4:-1398743 | None:intergenic |
GCAGATTCTACTCAGAATAC+TGG | 0.456154 | 4.4:+1396653 | MS.gene058594:CDS |
CATGGTGCATGTCTAGGTCT+TGG | 0.456191 | 4.4:+1397502 | MS.gene058594:CDS |
TTGCCTCAGGGTGGGACTGG+TGG | 0.456946 | 4.4:+1397281 | MS.gene058594:CDS |
CTCACTTGTTATGGCTGTAA+AGG | 0.458815 | 4.4:-1396832 | None:intergenic |
GCCAAATTCAGTGCAACGGC+TGG | 0.460539 | 4.4:+1397200 | MS.gene058594:CDS |
GATGAAGAACTCTGCAATCC+TGG | 0.462319 | 4.4:-1399393 | None:intergenic |
AGCTCTGGGAATTGCTCTTA+CGG | 0.463949 | 4.4:+1397797 | MS.gene058594:CDS |
GAGAGGTTAAACAAAATAAA+GGG | 0.463995 | 4.4:+1396767 | MS.gene058594:CDS |
TCTCTCCAACCTCAACAATC+TGG | 0.466462 | 4.4:+1394430 | MS.gene058594:CDS |
GCTGGTTCCCCGTCCGCCAT+TGG | 0.467049 | 4.4:-1396698 | None:intergenic |
CCATAGAGGTCATTTGCAGC+AGG | 0.467827 | 4.4:+1397235 | MS.gene058594:CDS |
AGGACAGAACTAACCTGCTC+TGG | 0.470545 | 4.4:-1398041 | None:intergenic |
TTAATGAACTTCTCCTGAGC+AGG | 0.471986 | 4.4:-1399225 | None:intergenic |
CCCAAGACTGGAAGCAATTG+TGG | 0.472490 | 4.4:+1395779 | MS.gene058594:CDS |
TCCAGCATGCATTATTGCAT+TGG | 0.472646 | 4.4:-1397034 | None:intergenic |
GCTGTTGCCGGTGAGGCTGC+TGG | 0.476468 | 4.4:+1397595 | MS.gene058594:CDS |
AAGCTTATGAAATAGATAAG+AGG | 0.477531 | 4.4:-1398671 | None:intergenic |
GGCTTCTCCATCCTTCTCAC+TGG | 0.480813 | 4.4:-1398972 | None:intergenic |
CATTTCTTCCGCCAGCATCA+AGG | 0.480834 | 4.4:-1398559 | None:intergenic |
TGACCATAGCCATTGCTATG+AGG | 0.488921 | 4.4:-1398343 | None:intergenic |
GGAGAGAGCGTGAATCTTCA+GGG | 0.489567 | 4.4:-1394414 | None:intergenic |
TGGCAGTTCCCATAGCTTGT+TGG | 0.489815 | 4.4:-1395931 | None:intergenic |
GACTCACTATCCTATGCCCT+TGG | 0.491337 | 4.4:+1395436 | MS.gene058594:CDS |
TGAGCAGATGACTCGAGATC+AGG | 0.492635 | 4.4:+1397854 | MS.gene058594:CDS |
TGGCATGTATGCACTGGCTT+TGG | 0.492933 | 4.4:+1397896 | MS.gene058594:CDS |
TCTACATCAGCTCCAAGTGC+TGG | 0.494421 | 4.4:+1398935 | MS.gene058594:CDS |
CAGGATCCAATATTACGTTA+TGG | 0.496766 | 4.4:+1397873 | MS.gene058594:CDS |
ATGTTTCAGAGGGTTAGCTC+TGG | 0.498173 | 4.4:+1397782 | MS.gene058594:intron |
TTTGATGCCTTCTCCATGGT+TGG | 0.501980 | 4.4:-1397357 | None:intergenic |
GCAGTTGATGTCGTAGATGC+AGG | 0.502464 | 4.4:-1399357 | None:intergenic |
GTCCCACCCTGAGGCAAGTA+GGG | 0.504577 | 4.4:-1397275 | None:intergenic |
CATCAGCTAAGGCCAAAGCC+AGG | 0.505060 | 4.4:+1398855 | MS.gene058594:CDS |
ATGATGTTCCAATGGCGGAC+GGG | 0.505483 | 4.4:+1396690 | MS.gene058594:CDS |
ACGACGTTGGTCAGCTCAGC+CGG | 0.507655 | 4.4:+1394356 | MS.gene058594:CDS |
CAGCTCAGCCGGTGGCATGT+TGG | 0.508274 | 4.4:+1394367 | MS.gene058594:CDS |
TCAGCTCCAAGTGCTGGAAA+AGG | 0.509472 | 4.4:+1398941 | MS.gene058594:CDS |
TAAGAAAGCTGAGGAACAGA+AGG | 0.510396 | 4.4:+1398883 | MS.gene058594:CDS |
TTTGGCTCTACGGACTCTAA+AGG | 0.511037 | 4.4:-1396620 | None:intergenic |
GTTGAGCAGAGCTACTAATT+GGG | 0.514161 | 4.4:+1397178 | MS.gene058594:CDS |
GTTGAGACTTTGGCAATGAA+AGG | 0.514680 | 4.4:-1396598 | None:intergenic |
GACCATAGCCATTGCTATGA+GGG | 0.517067 | 4.4:-1398342 | None:intergenic |
ATCGACCAGATTGTTGAGGT+TGG | 0.517100 | 4.4:-1394435 | None:intergenic |
TACAATCCACATGTTCGTTA+CGG | 0.520609 | 4.4:+1398212 | MS.gene058594:CDS |
CTGATGTGAGTGATGATGTC+AGG | 0.520902 | 4.4:+1397976 | MS.gene058594:CDS |
TGATGTTCCAATGGCGGACG+GGG | 0.521532 | 4.4:+1396691 | MS.gene058594:CDS |
GTGGATTGTATGATTCTGAT+AGG | 0.523060 | 4.4:-1398199 | None:intergenic |
TTCTTCATCAGCAATGGCTG+TGG | 0.523176 | 4.4:+1399407 | MS.gene058594:CDS |
GGTGGTGCTCTTTATGCCCT+CGG | 0.523440 | 4.4:+1397323 | MS.gene058594:CDS |
CGCCCTACTTGCCTCAGGGT+GGG | 0.525021 | 4.4:+1397273 | MS.gene058594:CDS |
GGTTGGAACAGGCAGTGATA+AGG | 0.525506 | 4.4:+1397639 | MS.gene058594:CDS |
CAGCATGGCCAACATGCCAC+CGG | 0.526548 | 4.4:-1394375 | None:intergenic |
GAGGATACCATGAGCAAGAT+GGG | 0.527104 | 4.4:+1398515 | MS.gene058594:CDS |
TTCAGTCATGGCTACGACGT+TGG | 0.527304 | 4.4:+1394343 | None:intergenic |
GAAGCTAGTGATTCGCGTGT+TGG | 0.527917 | 4.4:+1398380 | MS.gene058594:CDS |
AGTCCCACCCTGAGGCAAGT+AGG | 0.529432 | 4.4:-1397276 | None:intergenic |
CAATTCAGGTGTATTGTGGA+TGG | 0.530057 | 4.4:+1395902 | MS.gene058594:intron |
ATTCAACATGGTGCATGTCT+AGG | 0.530327 | 4.4:+1397496 | MS.gene058594:CDS |
TCTTCAATTCAGGTGTATTG+TGG | 0.532154 | 4.4:+1395898 | MS.gene058594:intron |
ACTGCTGGTGGGTCAGGACC+AGG | 0.532813 | 4.4:+1399375 | MS.gene058594:CDS |
TGACATTTAGAAGAAAAGCT+TGG | 0.532851 | 4.4:-1396568 | None:intergenic |
TGCCGCATTACTTGTATCAA+AGG | 0.534132 | 4.4:+1395086 | MS.gene058594:CDS |
TCGTGCTGCGCAAGCTATCA+CGG | 0.534450 | 4.4:-1397388 | None:intergenic |
CATAGCAATGGCTATGGTCA+TGG | 0.535078 | 4.4:+1398346 | MS.gene058594:CDS |
TCAAATGGTTGAGGAGGTTG+AGG | 0.536397 | 4.4:-1399438 | None:intergenic |
AGGAGTTTGATCAGCATCAA+AGG | 0.536478 | 4.4:+1395058 | MS.gene058594:CDS |
GATGTTGACAAAACAGCAGT+TGG | 0.538017 | 4.4:-1398836 | None:intergenic |
CGTGAATCTTCAGGGAGATG+TGG | 0.540725 | 4.4:-1394406 | None:intergenic |
GGAAAATACCAACAAGCTAT+GGG | 0.540976 | 4.4:+1395923 | MS.gene058594:CDS |
TATCAGTATGGGCCTACTCA+TGG | 0.541724 | 4.4:+1397618 | MS.gene058594:CDS |
TGTTTCAGAGGGTTAGCTCT+GGG | 0.542560 | 4.4:+1397783 | MS.gene058594:intron |
GGCACATTGACAGCAGAAGC+TGG | 0.542844 | 4.4:-1396716 | None:intergenic |
CTTGCGCAGCACGACTGTTG+AGG | 0.543633 | 4.4:+1397397 | MS.gene058594:CDS |
GAGGCTGCTGGTATCAGTAT+GGG | 0.546660 | 4.4:+1397607 | MS.gene058594:CDS |
TGAGGATACCATGAGCAAGA+TGG | 0.547720 | 4.4:+1398514 | MS.gene058594:CDS |
TGGGAACTGCCATTGAATGC+AGG | 0.550560 | 4.4:+1395942 | MS.gene058594:CDS |
CTTGGAGCTGATGTAGAGTC+GGG | 0.550594 | 4.4:-1398929 | None:intergenic |
GCTGTGGGTATTTCCTGTGC+GGG | 0.551364 | 4.4:+1398245 | MS.gene058594:CDS |
TTACGGAGCAGCTCTTGCTG+TGG | 0.551926 | 4.4:+1398229 | MS.gene058594:CDS |
ACTAAGACCTGTACCCGCAC+AGG | 0.553691 | 4.4:-1398258 | None:intergenic |
GCCAATGCAATAATGCATGC+TGG | 0.554004 | 4.4:+1397033 | MS.gene058594:CDS |
GAAATACTTTAACAAGGAGA+CGG | 0.555096 | 4.4:-1396382 | None:intergenic |
ATGTTCTTGGATGAGCCAGA+GGG | 0.555263 | 4.4:+1396449 | MS.gene058594:CDS |
TATCAAAGTAGACCCAAGAC+TGG | 0.555724 | 4.4:+1395767 | MS.gene058594:CDS |
TACGGAGCAGCTCTTGCTGT+GGG | 0.559179 | 4.4:+1398230 | MS.gene058594:CDS |
GGGACCAGCTCCAAGGGCAT+AGG | 0.559805 | 4.4:-1395446 | None:intergenic |
ATTCATGCCAACCATGGAGA+AGG | 0.560957 | 4.4:+1397350 | MS.gene058594:CDS |
AGGAAAGTCTTCCAGTGAGA+AGG | 0.561790 | 4.4:+1398961 | MS.gene058594:CDS |
AAGTCTTCCAGTGAGAAGGA+TGG | 0.561796 | 4.4:+1398965 | MS.gene058594:CDS |
TTCCCTCAGGAAAGTATCCA+CGG | 0.561912 | 4.4:-1397061 | None:intergenic |
GCAGAGTTCTTCATCAGCAA+TGG | 0.561955 | 4.4:+1399401 | MS.gene058594:CDS |
ATCTCTAGGAACTGCTGATG+AGG | 0.563533 | 4.4:+1397531 | MS.gene058594:CDS |
TGCCCTCATAGCAATGGCTA+TGG | 0.563797 | 4.4:+1398340 | MS.gene058594:CDS |
GAGGTCATTTGCAGCAGGGA+AGG | 0.563886 | 4.4:+1397240 | MS.gene058594:CDS |
TGAGAGTTTGTACGAAGATG+AGG | 0.564498 | 4.4:+1395038 | MS.gene058594:CDS |
ATTGTTTGATGCCTTCTCCA+TGG | 0.565857 | 4.4:-1397361 | None:intergenic |
GAAGGATGGAGAAGCCATGC+AGG | 0.566051 | 4.4:+1398979 | MS.gene058594:CDS |
TTCTGCTGTCAATGTGCCTG+AGG | 0.568847 | 4.4:+1396721 | MS.gene058594:CDS |
ACTTGGAGCTGATGTAGAGT+CGG | 0.572042 | 4.4:-1398930 | None:intergenic |
ATACATAAGGGGAACACTTG+TGG | 0.572276 | 4.4:-1394477 | None:intergenic |
AAACAGGGGACCAGCTCCAA+GGG | 0.572325 | 4.4:-1395452 | None:intergenic |
ATTGTATGATTCTGATAGGA+GGG | 0.573007 | 4.4:-1398195 | None:intergenic |
TTTCACTGTTGAAGTAGTGG+TGG | 0.574051 | 4.4:-1398810 | None:intergenic |
ACTGATACCAGCAGCCTCAC+CGG | 0.575307 | 4.4:-1397602 | None:intergenic |
GGTCTTGGATTGGCATCTCT+AGG | 0.577061 | 4.4:+1397517 | MS.gene058594:CDS |
TTCAGACCGATTAAAGCCGT+TGG | 0.577561 | 4.4:-1398704 | None:intergenic |
GGACTTGGTGTTATCCATAG+AGG | 0.578245 | 4.4:+1397221 | MS.gene058594:CDS |
GCGCCCTACTTGCCTCAGGG+TGG | 0.578270 | 4.4:+1397272 | MS.gene058594:CDS |
GCATCTACGACATCAACTGC+TGG | 0.579343 | 4.4:+1399360 | MS.gene058594:CDS |
TCCGGAATCCTTGATGCTGG+CGG | 0.580078 | 4.4:+1398551 | MS.gene058594:CDS |
ATGGCGCCCTACTTGCCTCA+GGG | 0.581130 | 4.4:+1397269 | MS.gene058594:CDS |
TGCTGTGGGTATTTCCTGTG+CGG | 0.582512 | 4.4:+1398244 | MS.gene058594:CDS |
TCTAACAAATCCAGCAAGAG+TGG | 0.582580 | 4.4:+1399200 | MS.gene058594:CDS |
TATGTTCTTGGATGAGCCAG+AGG | 0.582808 | 4.4:+1396448 | MS.gene058594:CDS |
GCTGTACTCTGATCCAGAGC+AGG | 0.584183 | 4.4:+1398028 | MS.gene058594:CDS |
AATTGCACCCATCTTGCTCA+TGG | 0.584856 | 4.4:-1398522 | None:intergenic |
TTCACTGTTGAAGTAGTGGT+GGG | 0.585150 | 4.4:-1398809 | None:intergenic |
TGGGAACAGTCGTAGGCTTG+GGG | 0.585173 | 4.4:-1398790 | None:intergenic |
GCAAGAACTTCAGGCTCGGT+AGG | 0.586206 | 4.4:-1399321 | None:intergenic |
GATAAAGTTACTGCAGTGGT+TGG | 0.586930 | 4.4:+1398614 | MS.gene058594:CDS |
GTGAATCTTCAGGGAGATGT+GGG | 0.588767 | 4.4:-1394405 | None:intergenic |
AGTATGGGCCTACTCATGGT+TGG | 0.589770 | 4.4:+1397622 | MS.gene058594:CDS |
TGAGTAGAATCTGCATCACT+GGG | 0.589801 | 4.4:-1396644 | None:intergenic |
AAGTTTCACTGTTGAAGTAG+TGG | 0.590303 | 4.4:-1398813 | None:intergenic |
GTTCTTGGATGAGCCAGAGG+GGG | 0.592212 | 4.4:+1396451 | MS.gene058594:CDS |
ATGCTCAGATAATCTGGTGA+AGG | 0.593508 | 4.4:-1396413 | None:intergenic |
AGCTTATGAAATAGATAAGA+GGG | 0.594563 | 4.4:-1398670 | None:intergenic |
CAGGAGATTGGATAAACTTG+AGG | 0.594774 | 4.4:+1395961 | MS.gene058594:CDS |
TCAACAACATCCGAAGTCAA+AGG | 0.594848 | 4.4:-1398302 | None:intergenic |
TGGTATCCTCATGCTTGTCA+AGG | 0.595965 | 4.4:-1398502 | None:intergenic |
TCTACGACATCAACTGCTGG+TGG | 0.596516 | 4.4:+1399363 | MS.gene058594:CDS |
CATAGAGGTCATTTGCAGCA+GGG | 0.597007 | 4.4:+1397236 | MS.gene058594:CDS |
ATCAGCTAAGGCCAAAGCCA+GGG | 0.602026 | 4.4:+1398856 | MS.gene058594:CDS |
ACAGCACAAACCCTAATGCT+AGG | 0.602863 | 4.4:-1398010 | None:intergenic |
GGTCTTCAAAATAAGGAGGT+CGG | 0.604928 | 4.4:-1396956 | None:intergenic |
TGCATGTCTAGGTCTTGGAT+TGG | 0.605817 | 4.4:+1397507 | MS.gene058594:CDS |
GATGATGTTCCAATGGCGGA+CGG | 0.606142 | 4.4:+1396689 | MS.gene058594:CDS |
AAAGTGAAGTAATTGACGAA+TGG | 0.609715 | 4.4:-1397946 | None:intergenic |
CAGGGCTAGTAAGAAAGCTG+AGG | 0.614232 | 4.4:+1398874 | MS.gene058594:CDS |
CAAACAGGGGACCAGCTCCA+AGG | 0.614560 | 4.4:-1395453 | None:intergenic |
AGCTATCGACCAGATTGTTG+AGG | 0.617954 | 4.4:-1394439 | None:intergenic |
TTAAGAAGCACAAACCCTGA+AGG | 0.618792 | 4.4:-1399288 | None:intergenic |
TGATAGTGCTGTTGCCGGTG+AGG | 0.619271 | 4.4:+1397588 | MS.gene058594:CDS |
GAAGACCATAAAGCAGTCTG+TGG | 0.620130 | 4.4:+1396972 | MS.gene058594:CDS |
GCAGCAGGGAAGGTCACTGA+TGG | 0.621007 | 4.4:+1397250 | MS.gene058594:CDS |
TCAGGGTGCCCTCATAGCAA+TGG | 0.622547 | 4.4:+1398334 | MS.gene058594:CDS |
TTGGGCCAAATTCAGTGCAA+CGG | 0.622608 | 4.4:+1397196 | MS.gene058594:CDS |
GGTGGTAGTCCATACTCAGA+AGG | 0.623238 | 4.4:+1397302 | MS.gene058594:CDS |
GATGTGTACTCAAATGGTTG+AGG | 0.626239 | 4.4:-1399447 | None:intergenic |
GATCCAATATTACGTTATGG+TGG | 0.627085 | 4.4:+1397876 | MS.gene058594:CDS |
GGTCTGATTCATGCCAACCA+TGG | 0.628696 | 4.4:+1397344 | MS.gene058594:CDS |
GATAGGAGGGAAACAATTCG+AGG | 0.629557 | 4.4:-1398182 | None:intergenic |
TATGGCCAGGTCATTCAACA+TGG | 0.632302 | 4.4:+1397484 | MS.gene058594:intron |
CTACGACATCAACTGCTGGT+GGG | 0.633190 | 4.4:+1399364 | MS.gene058594:CDS |
GATGTGGGACTCGTGCAGCA+TGG | 0.634411 | 4.4:-1394390 | None:intergenic |
GGTTTACGGAAGAGAAGAAG+AGG | 0.635138 | 4.4:+1397818 | MS.gene058594:CDS |
AACCGTGGATACTTTCCTGA+GGG | 0.636227 | 4.4:+1397059 | MS.gene058594:CDS |
AGAGTGATTACATACATAAG+GGG | 0.636567 | 4.4:-1394488 | None:intergenic |
ACAAGAAGTGACAATGTGCA+AGG | 0.637151 | 4.4:+1395992 | MS.gene058594:CDS |
TTATGGTCTTCAAAATAAGG+AGG | 0.637784 | 4.4:-1396960 | None:intergenic |
GTAGTGGTGGGAACAGTCGT+AGG | 0.638941 | 4.4:-1398797 | None:intergenic |
GCATGATAAAGTTACTGCAG+TGG | 0.640321 | 4.4:+1398610 | MS.gene058594:CDS |
AATAGCAAGAACTTCAGGCT+CGG | 0.640998 | 4.4:-1399325 | None:intergenic |
ACTCAGAATACTGGTGTGAG+TGG | 0.641390 | 4.4:+1396662 | MS.gene058594:CDS |
GTTGGCATGAATCAGACCGA+GGG | 0.641472 | 4.4:-1397339 | None:intergenic |
TGGACCAGATGATGTTCCAA+TGG | 0.647251 | 4.4:+1396682 | MS.gene058594:CDS |
TTATGGTGGCATGTATGCAC+TGG | 0.648795 | 4.4:+1397890 | MS.gene058594:CDS |
GCCAGCATCAAGGATTCCGG+AGG | 0.649554 | 4.4:-1398549 | None:intergenic |
GAATCTTAGAGAATACAGAC+AGG | 0.652688 | 4.4:+1396054 | MS.gene058594:CDS |
GCTGCTCCGTAACGAACATG+TGG | 0.655887 | 4.4:-1398218 | None:intergenic |
CAATGTATGCATTACCTGCA+TGG | 0.656072 | 4.4:-1398993 | None:intergenic |
ATCCTGTGAAACATCAAACA+GGG | 0.656841 | 4.4:-1395467 | None:intergenic |
ACCAGATGATGTTCCAATGG+CGG | 0.657198 | 4.4:+1396685 | MS.gene058594:CDS |
GGTAGTCCATACTCAGAAGG+TGG | 0.657262 | 4.4:+1397305 | MS.gene058594:CDS |
TGTTCTTGGATGAGCCAGAG+GGG | 0.657310 | 4.4:+1396450 | MS.gene058594:CDS |
AATTATCCTTGACAAGCATG+AGG | 0.660003 | 4.4:+1398496 | MS.gene058594:CDS |
GATTGTATGATTCTGATAGG+AGG | 0.661847 | 4.4:-1398196 | None:intergenic |
TGCCTGTTCCAACCATGAGT+AGG | 0.663707 | 4.4:-1397630 | None:intergenic |
TGCGGGTACAGGTCTTAGTG+AGG | 0.666367 | 4.4:+1398262 | MS.gene058594:CDS |
GCACTGGCTTTGGCGTATAG+CGG | 0.666930 | 4.4:+1397906 | MS.gene058594:CDS |
AATGCATGCTGGAACAACCG+TGG | 0.668717 | 4.4:+1397044 | MS.gene058594:CDS |
TGCTAGTTTCAAGTCTAAGG+CGG | 0.669969 | 4.4:+1395734 | MS.gene058594:CDS |
GTGTACTCAAATGGTTGAGG+AGG | 0.670691 | 4.4:-1399444 | None:intergenic |
TACCTTTGATACAAGTAATG+CGG | 0.671026 | 4.4:-1395088 | None:intergenic |
ACGTTGGTCAGCTCAGCCGG+TGG | 0.681112 | 4.4:+1394359 | MS.gene058594:CDS |
GGTTGGCATGAATCAGACCG+AGG | 0.688601 | 4.4:-1397340 | None:intergenic |
TCTTAGAGAATACAGACAGG+AGG | 0.696091 | 4.4:+1396057 | MS.gene058594:CDS |
TTACGGAAGAGAAGAAGAGG+CGG | 0.701441 | 4.4:+1397821 | MS.gene058594:CDS |
CAACCGTGGATACTTTCCTG+AGG | 0.701995 | 4.4:+1397058 | MS.gene058594:CDS |
CCACCACCAGTCCCACCCTG+AGG | 0.702255 | 4.4:-1397284 | None:intergenic |
TCCTGTGAAACATCAAACAG+GGG | 0.711450 | 4.4:-1395466 | None:intergenic |
TGCTGCGCAAGCTATCACGG+AGG | 0.731636 | 4.4:-1397385 | None:intergenic |
ATGTGAGTGATGATGTCAGG+AGG | 0.740753 | 4.4:+1397979 | MS.gene058594:CDS |
GTATTCTCTAAGATTCACAA+AGG | 0.747713 | 4.4:-1396047 | None:intergenic |
TGGCATAAATGGTAGCACTG+TGG | 0.777224 | 4.4:-1397014 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTCAAAAAAAAAAAAAAAA+AGG | - | chr4.4:1398099-1398118 | None:intergenic | 10.0% |
!! | TAAAATCATAAAAATTTCAA+TGG | - | chr4.4:1396190-1396209 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTTTTTTTGAG+TGG | + | chr4.4:1398098-1398117 | MS.gene058594:intron | 10.0% |
!! | AAAAAAAAAAAAAGGTAACT+CGG | - | chr4.4:1398091-1398110 | None:intergenic | 15.0% |
!! | CATCTAAGAATAATAATATA+TGG | - | chr4.4:1395329-1395348 | None:intergenic | 15.0% |
!! | TTAGATAATCATTTATTTGT+TGG | + | chr4.4:1396880-1396899 | MS.gene058594:intron | 15.0% |
!!! | TAATATTTTATAAATTGTCG+TGG | - | chr4.4:1395686-1395705 | None:intergenic | 15.0% |
!!! | TTATATAGAATTTTTAACAG+CGG | + | chr4.4:1396309-1396328 | MS.gene058594:intron | 15.0% |
!! | AAAAAAAAAAAAGGTAACTC+GGG | - | chr4.4:1398090-1398109 | None:intergenic | 20.0% |
!! | ACGAAAAAATTATAAGGTAA+AGG | + | chr4.4:1397698-1397717 | MS.gene058594:intron | 20.0% |
!! | AGAGGAAATATAAAAAGAAA+AGG | - | chr4.4:1398064-1398083 | None:intergenic | 20.0% |
!! | ATATTATTATTCTTAGATGC+TGG | + | chr4.4:1395330-1395349 | MS.gene058594:intron | 20.0% |
!! | TAAAATTAAAGGGATGAAAA+GGG | - | chr4.4:1396151-1396170 | None:intergenic | 20.0% |
!!! | AAATATTATGTTTTCAGCTA+AGG | + | chr4.4:1395698-1395717 | MS.gene058594:intron | 20.0% |
!!! | AGATAACAAATAAGTATTGT+CGG | + | chr4.4:1395237-1395256 | MS.gene058594:intron | 20.0% |
!!! | CCTTTAAAACAATAAAGTTT+CGG | - | chr4.4:1399131-1399150 | None:intergenic | 20.0% |
!!! | GATATTGCTTGTTTTTTTTT+TGG | + | chr4.4:1396349-1396368 | MS.gene058594:intron | 20.0% |
!!! | GTTTTTTAGTGTTAATTTGT+TGG | + | chr4.4:1394959-1394978 | MS.gene058594:intron | 20.0% |
!!! | TATATCTAATGTGTTGTTTA+TGG | + | chr4.4:1397466-1397485 | MS.gene058594:intron | 20.0% |
! | AAAGAGTGATTACATACATA+AGG | - | chr4.4:1394493-1394512 | None:intergenic | 25.0% |
! | AAGAGTGATTACATACATAA+GGG | - | chr4.4:1394492-1394511 | None:intergenic | 25.0% |
! | AAGCTTATGAAATAGATAAG+AGG | - | chr4.4:1398674-1398693 | None:intergenic | 25.0% |
! | AGCTCAATGACTAAAATTAA+AGG | - | chr4.4:1396162-1396181 | None:intergenic | 25.0% |
! | AGCTTATGAAATAGATAAGA+GGG | - | chr4.4:1398673-1398692 | None:intergenic | 25.0% |
! | ATCAACAAGTCTTAATGATT+TGG | - | chr4.4:1394909-1394928 | None:intergenic | 25.0% |
! | CACAACACGAAAAAATTATA+AGG | + | chr4.4:1397692-1397711 | MS.gene058594:CDS | 25.0% |
! | CTAAAATTAAAGGGATGAAA+AGG | - | chr4.4:1396152-1396171 | None:intergenic | 25.0% |
! | GAGAGGTTAAACAAAATAAA+GGG | + | chr4.4:1396767-1396786 | MS.gene058594:CDS | 25.0% |
! | GCTCAATGACTAAAATTAAA+GGG | - | chr4.4:1396161-1396180 | None:intergenic | 25.0% |
! | TATCATGTTTCTTTCTTACT+TGG | + | chr4.4:1394928-1394947 | MS.gene058594:intron | 25.0% |
! | TCTTATCTATTTCATAAGCT+TGG | + | chr4.4:1398673-1398692 | MS.gene058594:CDS | 25.0% |
! | TGAGAGGTTAAACAAAATAA+AGG | + | chr4.4:1396766-1396785 | MS.gene058594:CDS | 25.0% |
! | TTTGAAAGCTTCTGAATTAA+GGG | + | chr4.4:1394875-1394894 | MS.gene058594:intron | 25.0% |
! | TTTGTTAGAATCTCAAAAGT+AGG | - | chr4.4:1399189-1399208 | None:intergenic | 25.0% |
!! | AAAATAAAGGGAATTTTGTC+TGG | + | chr4.4:1396779-1396798 | MS.gene058594:CDS | 25.0% |
!! | ATCATTTATTTGTTGGTACT+TGG | + | chr4.4:1396887-1396906 | MS.gene058594:intron | 25.0% |
!! | ATCTTAGGTCTTTTATTACT+TGG | + | chr4.4:1395402-1395421 | MS.gene058594:intron | 25.0% |
!! | CATCTTTTAAACATCTCTTT+TGG | + | chr4.4:1396212-1396231 | MS.gene058594:intron | 25.0% |
!! | GAAGTTCATTAAATTTTTGC+AGG | + | chr4.4:1399236-1399255 | MS.gene058594:CDS | 25.0% |
!! | GGTAAGGAAAGTATATTATT+TGG | + | chr4.4:1398411-1398430 | MS.gene058594:intron | 25.0% |
!! | TACTATGATCTCTTTGAAAA+TGG | + | chr4.4:1395577-1395596 | MS.gene058594:intron | 25.0% |
!! | TCTTAGGTCTTTTATTACTT+GGG | + | chr4.4:1395403-1395422 | MS.gene058594:intron | 25.0% |
!! | TTTTCTTCACTCTTTATCTT+AGG | + | chr4.4:1395387-1395406 | MS.gene058594:intron | 25.0% |
!! | TTTTGTTCCTTGAAAATTGT+AGG | + | chr4.4:1397151-1397170 | MS.gene058594:intron | 25.0% |
!!! | ACTTCAAATAGCTTTTGATT+TGG | + | chr4.4:1396532-1396551 | MS.gene058594:CDS | 25.0% |
!!! | ATTGTTTCTAAATGTTTCAG+AGG | + | chr4.4:1397771-1397790 | MS.gene058594:intron | 25.0% |
!!! | CCGAAACTTTATTGTTTTAA+AGG | + | chr4.4:1399128-1399147 | MS.gene058594:intron | 25.0% |
!!! | GCTTTTGAAATACTTTAACA+AGG | - | chr4.4:1396391-1396410 | None:intergenic | 25.0% |
!!! | GTTAGTGGTTTTATTCATTT+TGG | + | chr4.4:1395636-1395655 | MS.gene058594:intron | 25.0% |
!!! | TTCTTTGATTTCATGCTTTT+CGG | + | chr4.4:1394521-1394540 | MS.gene058594:intron | 25.0% |
!!! | TTGTTTCTAAATGTTTCAGA+GGG | + | chr4.4:1397772-1397791 | MS.gene058594:intron | 25.0% |
!!! | TTTTGAAAGCTTCTGAATTA+AGG | + | chr4.4:1394874-1394893 | MS.gene058594:intron | 25.0% |
AAAACCTATGTTGTCAATAG+TGG | - | chr4.4:1394858-1394877 | None:intergenic | 30.0% | |
AAAGTGAAGTAATTGACGAA+TGG | - | chr4.4:1397949-1397968 | None:intergenic | 30.0% | |
AATATACTTTCCTTACCTGA+AGG | - | chr4.4:1398408-1398427 | None:intergenic | 30.0% | |
AGAGTGATTACATACATAAG+GGG | - | chr4.4:1394491-1394510 | None:intergenic | 30.0% | |
AGATTTGAGAGTCCTATTAA+CGG | - | chr4.4:1396244-1396263 | None:intergenic | 30.0% | |
ATGAAAAAACTTAAGTCCTC+TGG | - | chr4.4:1395304-1395323 | None:intergenic | 30.0% | |
ATTGTATGATTCTGATAGGA+GGG | - | chr4.4:1398198-1398217 | None:intergenic | 30.0% | |
CAACGAAAATTGAGAATTGA+GGG | - | chr4.4:1395874-1395893 | None:intergenic | 30.0% | |
CAGATACTAAAATACAAACC+AGG | - | chr4.4:1395365-1395384 | None:intergenic | 30.0% | |
GAAATACTTTAACAAGGAGA+CGG | - | chr4.4:1396385-1396404 | None:intergenic | 30.0% | |
GCTTTATGGTCTTCAAAATA+AGG | - | chr4.4:1396966-1396985 | None:intergenic | 30.0% | |
TACCTTTGATACAAGTAATG+CGG | - | chr4.4:1395091-1395110 | None:intergenic | 30.0% | |
TCAAATTCTACTACACACAA+TGG | - | chr4.4:1394724-1394743 | None:intergenic | 30.0% | |
TGACATTTAGAAGAAAAGCT+TGG | - | chr4.4:1396571-1396590 | None:intergenic | 30.0% | |
TTATGGTCTTCAAAATAAGG+AGG | - | chr4.4:1396963-1396982 | None:intergenic | 30.0% | |
TTCCTTGAAAATTGTAGGAT+TGG | + | chr4.4:1397156-1397175 | MS.gene058594:intron | 30.0% | |
TTGAAAGCTTCTGAATTAAG+GGG | + | chr4.4:1394876-1394895 | MS.gene058594:intron | 30.0% | |
! | AAACAAAGATGATGCTCTTT+TGG | + | chr4.4:1396508-1396527 | MS.gene058594:CDS | 30.0% |
! | AACCAATCCTACAATTTTCA+AGG | - | chr4.4:1397161-1397180 | None:intergenic | 30.0% |
! | AGCAATAGTCTTTTCTTTGA+CGG | - | chr4.4:1397447-1397466 | None:intergenic | 30.0% |
! | AGTCTTAGAAAGTAGTCTTA+TGG | - | chr4.4:1398588-1398607 | None:intergenic | 30.0% |
! | ATATGCTAGTTTCAAGTCTA+AGG | + | chr4.4:1395731-1395750 | MS.gene058594:CDS | 30.0% |
! | ATTGATAAGATTGGTTCAGT+TGG | + | chr4.4:1395605-1395624 | MS.gene058594:intron | 30.0% |
! | CATTATTGCATTGGCATAAA+TGG | - | chr4.4:1397028-1397047 | None:intergenic | 30.0% |
! | GTTGGAATGAGAATGTTTTT+GGG | + | chr4.4:1394977-1394996 | MS.gene058594:intron | 30.0% |
! | TATAGAATTTTTAACAGCGG+TGG | + | chr4.4:1396312-1396331 | MS.gene058594:intron | 30.0% |
! | TGTTGGAATGAGAATGTTTT+TGG | + | chr4.4:1394976-1394995 | MS.gene058594:intron | 30.0% |
!! | ATGTTGGTTCTTATACTGTT+TGG | + | chr4.4:1396914-1396933 | MS.gene058594:intron | 30.0% |
!! | GAGTTTATTTTCAATCGTGT+AGG | + | chr4.4:1394644-1394663 | MS.gene058594:intron | 30.0% |
!! | GTATTCTCTAAGATTCACAA+AGG | - | chr4.4:1396050-1396069 | None:intergenic | 30.0% |
!! | TAGTACAAAGTGTTGTCAAT+CGG | + | chr4.4:1394775-1394794 | MS.gene058594:intron | 30.0% |
!! | TTGGAATGAGAATGTTTTTG+GGG | + | chr4.4:1394978-1394997 | MS.gene058594:intron | 30.0% |
!!! | GCTTGTTTTTTTTTTGGTTC+AGG | + | chr4.4:1396355-1396374 | MS.gene058594:intron | 30.0% |
!!! | TCAGCATACATTTTTTCACT+TGG | - | chr4.4:1396749-1396768 | None:intergenic | 30.0% |
AAGTTTCACTGTTGAAGTAG+TGG | - | chr4.4:1398816-1398835 | None:intergenic | 35.0% | |
AATCCTGTGAAACATCAAAC+AGG | - | chr4.4:1395471-1395490 | None:intergenic | 35.0% | |
AATTATCCTTGACAAGCATG+AGG | + | chr4.4:1398496-1398515 | MS.gene058594:CDS | 35.0% | |
AATTCTACTACACACAATGG+TGG | - | chr4.4:1394721-1394740 | None:intergenic | 35.0% | |
AATTCTCACCTAGAAGAGTA+TGG | - | chr4.4:1395504-1395523 | None:intergenic | 35.0% | |
AGGAACAAAAACCTCAAGAA+TGG | - | chr4.4:1397141-1397160 | None:intergenic | 35.0% | |
ATCCTGTGAAACATCAAACA+GGG | - | chr4.4:1395470-1395489 | None:intergenic | 35.0% | |
ATGCCACCATAACGTAATAT+TGG | - | chr4.4:1397882-1397901 | None:intergenic | 35.0% | |
ATTAAAGGGATGAAAAGGGA+AGG | - | chr4.4:1396147-1396166 | None:intergenic | 35.0% | |
ATTGAGGGAACTCAAAGTTA+AGG | - | chr4.4:1395859-1395878 | None:intergenic | 35.0% | |
CAATCCACTATTGACAACAT+AGG | + | chr4.4:1394851-1394870 | MS.gene058594:intron | 35.0% | |
CAGATATGTTCCAGTTAAGT+TGG | + | chr4.4:1399263-1399282 | MS.gene058594:CDS | 35.0% | |
CAGGATCCAATATTACGTTA+TGG | + | chr4.4:1397873-1397892 | MS.gene058594:CDS | 35.0% | |
CTCAAGAATGGGAAATTACA+GGG | - | chr4.4:1397129-1397148 | None:intergenic | 35.0% | |
GAATCTTAGAGAATACAGAC+AGG | + | chr4.4:1396054-1396073 | MS.gene058594:CDS | 35.0% | |
GATCCAATATTACGTTATGG+TGG | + | chr4.4:1397876-1397895 | MS.gene058594:CDS | 35.0% | |
GATTGTATGATTCTGATAGG+AGG | - | chr4.4:1398199-1398218 | None:intergenic | 35.0% | |
GCAACGAAAATTGAGAATTG+AGG | - | chr4.4:1395875-1395894 | None:intergenic | 35.0% | |
GGAAAATACCAACAAGCTAT+GGG | + | chr4.4:1395923-1395942 | MS.gene058594:CDS | 35.0% | |
GGAACAAAAACCTCAAGAAT+GGG | - | chr4.4:1397140-1397159 | None:intergenic | 35.0% | |
GTCTATACGCAGAATATATC+CGG | + | chr4.4:1396112-1396131 | MS.gene058594:intron | 35.0% | |
GTGAAAAAATGTATGCTGAG+AGG | + | chr4.4:1396750-1396769 | MS.gene058594:CDS | 35.0% | |
TACAATCCACATGTTCGTTA+CGG | + | chr4.4:1398212-1398231 | MS.gene058594:CDS | 35.0% | |
TACTTTCCTGAGGGAAAATT+TGG | + | chr4.4:1397068-1397087 | MS.gene058594:CDS | 35.0% | |
TCAGTAATAGCAAGAACTTC+AGG | - | chr4.4:1399333-1399352 | None:intergenic | 35.0% | |
TCGTTGCATTTCTTCAATTC+AGG | + | chr4.4:1395888-1395907 | MS.gene058594:intron | 35.0% | |
TCTTCAATTCAGGTGTATTG+TGG | + | chr4.4:1395898-1395917 | MS.gene058594:intron | 35.0% | |
TGACAAATGCTCAGATAATC+TGG | - | chr4.4:1396422-1396441 | None:intergenic | 35.0% | |
TGAGACAAGAACTCAAACTT+TGG | - | chr4.4:1398746-1398765 | None:intergenic | 35.0% | |
TGGAAAATACCAACAAGCTA+TGG | + | chr4.4:1395922-1395941 | MS.gene058594:CDS | 35.0% | |
TTAAAGGGATGAAAAGGGAA+GGG | - | chr4.4:1396146-1396165 | None:intergenic | 35.0% | |
TTGTCAGTGTCTTATGTTCT+TGG | + | chr4.4:1396436-1396455 | MS.gene058594:CDS | 35.0% | |
! | ATGGACTGCATTGATAAGAT+TGG | + | chr4.4:1395596-1395615 | MS.gene058594:intron | 35.0% |
! | GAAAACAGTCTCACTTGTTA+TGG | - | chr4.4:1396844-1396863 | None:intergenic | 35.0% |
! | GCAATAGTCTTTTCTTTGAC+GGG | - | chr4.4:1397446-1397465 | None:intergenic | 35.0% |
! | GTGGATTGTATGATTCTGAT+AGG | - | chr4.4:1398202-1398221 | None:intergenic | 35.0% |
! | TGTTTTGTCAACATCAGCTA+AGG | + | chr4.4:1398844-1398863 | MS.gene058594:CDS | 35.0% |
! | TTGGGGTATTCAAAAAGTGA+AGG | - | chr4.4:1398776-1398795 | None:intergenic | 35.0% |
!! | CAATAGTGGATTGCAGAAAA+TGG | - | chr4.4:1394844-1394863 | None:intergenic | 35.0% |
!! | TAAGGTAAAGGTGTTTCACT+CGG | + | chr4.4:1397710-1397729 | MS.gene058594:intron | 35.0% |
!! | TCATCCTTTTTGATTGTACC+CGG | + | chr4.4:1395263-1395282 | MS.gene058594:intron | 35.0% |
!! | TTTTCACCAACGGCTTTAAT+CGG | + | chr4.4:1398698-1398717 | MS.gene058594:CDS | 35.0% |
!!! | ATTTTTTCACTTGGATCCTC+AGG | - | chr4.4:1396740-1396759 | None:intergenic | 35.0% |
!!! | GTTGTTGATTTTGTTCGTCA+GGG | + | chr4.4:1398317-1398336 | MS.gene058594:CDS | 35.0% |
!!! | TGTTGTTGATTTTGTTCGTC+AGG | + | chr4.4:1398316-1398335 | MS.gene058594:CDS | 35.0% |
!!! | TTTTGGTGTTGACCGTTAAT+AGG | + | chr4.4:1396229-1396248 | MS.gene058594:intron | 35.0% |
AACTTAAGTCCTCTGGTGAT+TGG | - | chr4.4:1395297-1395316 | None:intergenic | 40.0% | |
AATAGCAAGAACTTCAGGCT+CGG | - | chr4.4:1399328-1399347 | None:intergenic | 40.0% | |
AATGAGACAAATGTTTGCGC+TGG | + | chr4.4:1396280-1396299 | MS.gene058594:intron | 40.0% | |
ACAAGAAGTGACAATGTGCA+AGG | + | chr4.4:1395992-1396011 | MS.gene058594:CDS | 40.0% | |
AGAATACAGACAGGAGGTAA+GGG | + | chr4.4:1396063-1396082 | MS.gene058594:intron | 40.0% | |
AGGAGTTTGATCAGCATCAA+AGG | + | chr4.4:1395058-1395077 | MS.gene058594:CDS | 40.0% | |
ATACATAAGGGGAACACTTG+TGG | - | chr4.4:1394480-1394499 | None:intergenic | 40.0% | |
ATCCAATCTCCTGCATTCAA+TGG | - | chr4.4:1395954-1395973 | None:intergenic | 40.0% | |
ATGCTCAGATAATCTGGTGA+AGG | - | chr4.4:1396416-1396435 | None:intergenic | 40.0% | |
ATGGGAAATTACAGGGAAAG+AGG | - | chr4.4:1397122-1397141 | None:intergenic | 40.0% | |
ATTCAACATGGTGCATGTCT+AGG | + | chr4.4:1397496-1397515 | MS.gene058594:CDS | 40.0% | |
ATTGTTTGATGCCTTCTCCA+TGG | - | chr4.4:1397364-1397383 | None:intergenic | 40.0% | |
CAAAGGCTCCAGTAAAGATA+TGG | - | chr4.4:1398288-1398307 | None:intergenic | 40.0% | |
CAATGTATGCATTACCTGCA+TGG | - | chr4.4:1398996-1399015 | None:intergenic | 40.0% | |
CAATTCAGGTGTATTGTGGA+TGG | + | chr4.4:1395902-1395921 | MS.gene058594:intron | 40.0% | |
CAGGAGATTGGATAAACTTG+AGG | + | chr4.4:1395961-1395980 | MS.gene058594:CDS | 40.0% | |
CCTCAAGAATGGGAAATTAC+AGG | - | chr4.4:1397130-1397149 | None:intergenic | 40.0% | |
CCTGTAATTTCCCATTCTTG+AGG | + | chr4.4:1397127-1397146 | MS.gene058594:intron | 40.0% | |
GACTATGTCCATACTCTTCT+AGG | + | chr4.4:1395493-1395512 | MS.gene058594:CDS | 40.0% | |
GATAAAGTTACTGCAGTGGT+TGG | + | chr4.4:1398614-1398633 | MS.gene058594:CDS | 40.0% | |
GATGTGTACTCAAATGGTTG+AGG | - | chr4.4:1399450-1399469 | None:intergenic | 40.0% | |
GATGTTGACAAAACAGCAGT+TGG | - | chr4.4:1398839-1398858 | None:intergenic | 40.0% | |
GCAGATTCTACTCAGAATAC+TGG | + | chr4.4:1396653-1396672 | MS.gene058594:CDS | 40.0% | |
GCATGATAAAGTTACTGCAG+TGG | + | chr4.4:1398610-1398629 | MS.gene058594:CDS | 40.0% | |
GCTCTGATTTCTTCTCTGTT+GGG | - | chr4.4:1399161-1399180 | None:intergenic | 40.0% | |
GGAATTGCTCTTACGGTTTA+CGG | + | chr4.4:1397804-1397823 | MS.gene058594:CDS | 40.0% | |
GGTCTTCAAAATAAGGAGGT+CGG | - | chr4.4:1396959-1396978 | None:intergenic | 40.0% | |
GTTGAGACTTTGGCAATGAA+AGG | - | chr4.4:1396601-1396620 | None:intergenic | 40.0% | |
GTTGAGCAGAGCTACTAATT+GGG | + | chr4.4:1397178-1397197 | MS.gene058594:CDS | 40.0% | |
TAAGAAAGCTGAGGAACAGA+AGG | + | chr4.4:1398883-1398902 | MS.gene058594:CDS | 40.0% | |
TAGCGGAACAGCAAACAATA+AGG | + | chr4.4:1397923-1397942 | MS.gene058594:CDS | 40.0% | |
TAGTGAGGCCATATCTTTAC+TGG | + | chr4.4:1398277-1398296 | MS.gene058594:CDS | 40.0% | |
TATCAAAGTAGACCCAAGAC+TGG | + | chr4.4:1395767-1395786 | MS.gene058594:CDS | 40.0% | |
TCAACAACATCCGAAGTCAA+AGG | - | chr4.4:1398305-1398324 | None:intergenic | 40.0% | |
TCCAGCATGCATTATTGCAT+TGG | - | chr4.4:1397037-1397056 | None:intergenic | 40.0% | |
TCCTGTGAAACATCAAACAG+GGG | - | chr4.4:1395469-1395488 | None:intergenic | 40.0% | |
TCTAACAAATCCAGCAAGAG+TGG | + | chr4.4:1399200-1399219 | MS.gene058594:CDS | 40.0% | |
TCTTAGAGAATACAGACAGG+AGG | + | chr4.4:1396057-1396076 | MS.gene058594:CDS | 40.0% | |
TGAGAGTTTGTACGAAGATG+AGG | + | chr4.4:1395038-1395057 | MS.gene058594:CDS | 40.0% | |
TGAGTAGAATCTGCATCACT+GGG | - | chr4.4:1396647-1396666 | None:intergenic | 40.0% | |
TGCCGCATTACTTGTATCAA+AGG | + | chr4.4:1395086-1395105 | MS.gene058594:CDS | 40.0% | |
TGGGAAATTACAGGGAAAGA+GGG | - | chr4.4:1397121-1397140 | None:intergenic | 40.0% | |
TTAATGAACTTCTCCTGAGC+AGG | - | chr4.4:1399228-1399247 | None:intergenic | 40.0% | |
TTCACTGTTGAAGTAGTGGT+GGG | - | chr4.4:1398812-1398831 | None:intergenic | 40.0% | |
TTTCACTGTTGAAGTAGTGG+TGG | - | chr4.4:1398813-1398832 | None:intergenic | 40.0% | |
! | AACTCACCAAATTTTCCCTC+AGG | - | chr4.4:1397077-1397096 | None:intergenic | 40.0% |
! | AATTTTCTCCAATTGTCGCC+TGG | - | chr4.4:1398480-1398499 | None:intergenic | 40.0% |
! | AGCTCTGATTTCTTCTCTGT+TGG | - | chr4.4:1399162-1399181 | None:intergenic | 40.0% |
! | GACTCTAAAGGTTGAGACTT+TGG | - | chr4.4:1396611-1396630 | None:intergenic | 40.0% |
! | GATTAAAGCCGTTGGTGAAA+AGG | - | chr4.4:1398699-1398718 | None:intergenic | 40.0% |
! | GTTGGTACTTGGTAGTATGT+TGG | + | chr4.4:1396898-1396917 | MS.gene058594:intron | 40.0% |
! | TGCTAGTTTCAAGTCTAAGG+CGG | + | chr4.4:1395734-1395753 | MS.gene058594:CDS | 40.0% |
! | TTAAGAAGCACAAACCCTGA+AGG | - | chr4.4:1399291-1399310 | None:intergenic | 40.0% |
! | TTTACTGGAGCCTTTGACTT+CGG | + | chr4.4:1398292-1398311 | MS.gene058594:CDS | 40.0% |
!! | CAGTTGGTGTTACTTGTTAG+TGG | + | chr4.4:1395621-1395640 | MS.gene058594:intron | 40.0% |
!! | CTAATGTGTTGTTTATGGCC+AGG | + | chr4.4:1397471-1397490 | MS.gene058594:intron | 40.0% |
!! | CTCACTTGTTATGGCTGTAA+AGG | - | chr4.4:1396835-1396854 | None:intergenic | 40.0% |
!! | GAGGGTACCAATACCAAAAT+TGG | - | chr4.4:1398655-1398674 | None:intergenic | 40.0% |
!! | TACAAAGTGTTGTCAATCGG+CGG | + | chr4.4:1394778-1394797 | MS.gene058594:intron | 40.0% |
!!! | CGATGCTGTTTTTGCACATA+CGG | + | chr4.4:1395161-1395180 | MS.gene058594:intron | 40.0% |
AAAAGGTAACTCGGGACAAG+AGG | - | chr4.4:1398082-1398101 | None:intergenic | 45.0% | |
AACCGTGGATACTTTCCTGA+GGG | + | chr4.4:1397059-1397078 | MS.gene058594:CDS | 45.0% | |
AAGTCTTCCAGTGAGAAGGA+TGG | + | chr4.4:1398965-1398984 | MS.gene058594:CDS | 45.0% | |
AATTGCACCCATCTTGCTCA+TGG | - | chr4.4:1398525-1398544 | None:intergenic | 45.0% | |
ACAATCTGGTCGATAGCTTC+TGG | + | chr4.4:1394444-1394463 | MS.gene058594:CDS | 45.0% | |
ACAGCACAAACCCTAATGCT+AGG | - | chr4.4:1398013-1398032 | None:intergenic | 45.0% | |
ACCAGATGATGTTCCAATGG+CGG | + | chr4.4:1396685-1396704 | MS.gene058594:CDS | 45.0% | |
ACTCAGAATACTGGTGTGAG+TGG | + | chr4.4:1396662-1396681 | MS.gene058594:CDS | 45.0% | |
ACTTGGAGCTGATGTAGAGT+CGG | - | chr4.4:1398933-1398952 | None:intergenic | 45.0% | |
AGCTATCGACCAGATTGTTG+AGG | - | chr4.4:1394442-1394461 | None:intergenic | 45.0% | |
AGGAAAGTCTTCCAGTGAGA+AGG | + | chr4.4:1398961-1398980 | MS.gene058594:CDS | 45.0% | |
ATCGACCAGATTGTTGAGGT+TGG | - | chr4.4:1394438-1394457 | None:intergenic | 45.0% | |
ATGCACCATGTTGAATGACC+TGG | - | chr4.4:1397492-1397511 | None:intergenic | 45.0% | |
ATGTTCTTGGATGAGCCAGA+GGG | + | chr4.4:1396449-1396468 | MS.gene058594:CDS | 45.0% | |
ATTCATGCCAACCATGGAGA+AGG | + | chr4.4:1397350-1397369 | MS.gene058594:CDS | 45.0% | |
CATAGAGGTCATTTGCAGCA+GGG | + | chr4.4:1397236-1397255 | MS.gene058594:CDS | 45.0% | |
CATAGCAATGGCTATGGTCA+TGG | + | chr4.4:1398346-1398365 | MS.gene058594:CDS | 45.0% | |
CATCTCCACAGACTGCTTTA+TGG | - | chr4.4:1396980-1396999 | None:intergenic | 45.0% | |
CCACAATTGCTTCCAGTCTT+GGG | - | chr4.4:1395782-1395801 | None:intergenic | 45.0% | |
CTGAGTAGAATCTGCATCAC+TGG | - | chr4.4:1396648-1396667 | None:intergenic | 45.0% | |
GAAGACCATAAAGCAGTCTG+TGG | + | chr4.4:1396972-1396991 | MS.gene058594:CDS | 45.0% | |
GAAGCCGGGTACAATCAAAA+AGG | - | chr4.4:1395270-1395289 | None:intergenic | 45.0% | |
GACCATAGCCATTGCTATGA+GGG | - | chr4.4:1398345-1398364 | None:intergenic | 45.0% | |
GAGAATACAGACAGGAGGTA+AGG | + | chr4.4:1396062-1396081 | MS.gene058594:intron | 45.0% | |
GAGGATACCATGAGCAAGAT+GGG | + | chr4.4:1398515-1398534 | MS.gene058594:CDS | 45.0% | |
GATAGGAGGGAAACAATTCG+AGG | - | chr4.4:1398185-1398204 | None:intergenic | 45.0% | |
GATGAAGAACTCTGCAATCC+TGG | - | chr4.4:1399396-1399415 | None:intergenic | 45.0% | |
GCAGAGTTCTTCATCAGCAA+TGG | + | chr4.4:1399401-1399420 | MS.gene058594:CDS | 45.0% | |
GCCAATGCAATAATGCATGC+TGG | + | chr4.4:1397033-1397052 | MS.gene058594:CDS | 45.0% | |
GCTTCTAAACCAATCACCAG+AGG | + | chr4.4:1395285-1395304 | MS.gene058594:intron | 45.0% | |
GGTTGAGCAGAGCTACTAAT+TGG | + | chr4.4:1397177-1397196 | MS.gene058594:CDS | 45.0% | |
GGTTTACGGAAGAGAAGAAG+AGG | + | chr4.4:1397818-1397837 | MS.gene058594:CDS | 45.0% | |
GTGAATCTTCAGGGAGATGT+GGG | - | chr4.4:1394408-1394427 | None:intergenic | 45.0% | |
GTGTACTCAAATGGTTGAGG+AGG | - | chr4.4:1399447-1399466 | None:intergenic | 45.0% | |
TATCAGTATGGGCCTACTCA+TGG | + | chr4.4:1397618-1397637 | MS.gene058594:CDS | 45.0% | |
TATGGCCAGGTCATTCAACA+TGG | + | chr4.4:1397484-1397503 | MS.gene058594:intron | 45.0% | |
TATGTTCTTGGATGAGCCAG+AGG | + | chr4.4:1396448-1396467 | MS.gene058594:CDS | 45.0% | |
TCAAATGGTTGAGGAGGTTG+AGG | - | chr4.4:1399441-1399460 | None:intergenic | 45.0% | |
TCCACAATTGCTTCCAGTCT+TGG | - | chr4.4:1395783-1395802 | None:intergenic | 45.0% | |
TCCCCTGTTTGATGTTTCAC+AGG | + | chr4.4:1395465-1395484 | MS.gene058594:CDS | 45.0% | |
TCTCTCCAACCTCAACAATC+TGG | + | chr4.4:1394430-1394449 | MS.gene058594:CDS | 45.0% | |
TGACCATAGCCATTGCTATG+AGG | - | chr4.4:1398346-1398365 | None:intergenic | 45.0% | |
TGAGGATACCATGAGCAAGA+TGG | + | chr4.4:1398514-1398533 | MS.gene058594:CDS | 45.0% | |
TGCATGTCTAGGTCTTGGAT+TGG | + | chr4.4:1397507-1397526 | MS.gene058594:CDS | 45.0% | |
TGCCATTGAATGCAGGAGAT+TGG | + | chr4.4:1395949-1395968 | MS.gene058594:CDS | 45.0% | |
TGGACCAGATGATGTTCCAA+TGG | + | chr4.4:1396682-1396701 | MS.gene058594:CDS | 45.0% | |
TGGCATAAATGGTAGCACTG+TGG | - | chr4.4:1397017-1397036 | None:intergenic | 45.0% | |
TGGTATCCTCATGCTTGTCA+AGG | - | chr4.4:1398505-1398524 | None:intergenic | 45.0% | |
TTACGGAAGAGAAGAAGAGG+CGG | + | chr4.4:1397821-1397840 | MS.gene058594:CDS | 45.0% | |
TTATGGTGGCATGTATGCAC+TGG | + | chr4.4:1397890-1397909 | MS.gene058594:CDS | 45.0% | |
TTCAGACCGATTAAAGCCGT+TGG | - | chr4.4:1398707-1398726 | None:intergenic | 45.0% | |
TTCTGACATGCGTGTATTCC+AGG | + | chr4.4:1398459-1398478 | MS.gene058594:intron | 45.0% | |
TTCTTCATCAGCAATGGCTG+TGG | + | chr4.4:1399407-1399426 | MS.gene058594:CDS | 45.0% | |
TTGGGCCAAATTCAGTGCAA+CGG | + | chr4.4:1397196-1397215 | MS.gene058594:CDS | 45.0% | |
TTTCTTACTAGCCCTGGCTT+TGG | - | chr4.4:1398870-1398889 | None:intergenic | 45.0% | |
TTTGATGCCTTCTCCATGGT+TGG | - | chr4.4:1397360-1397379 | None:intergenic | 45.0% | |
! | AAAGGGAAGGGACGATTTTC+CGG | - | chr4.4:1396134-1396153 | None:intergenic | 45.0% |
! | ATCTCTAGGAACTGCTGATG+AGG | + | chr4.4:1397531-1397550 | MS.gene058594:CDS | 45.0% |
! | ATGTGAGTGATGATGTCAGG+AGG | + | chr4.4:1397979-1397998 | MS.gene058594:CDS | 45.0% |
! | CTGATGTGAGTGATGATGTC+AGG | + | chr4.4:1397976-1397995 | MS.gene058594:CDS | 45.0% |
! | GAATCTGCATCACTGGGTTT+TGG | - | chr4.4:1396641-1396660 | None:intergenic | 45.0% |
! | GACTTTCCTTTTCCAGCACT+TGG | - | chr4.4:1398950-1398969 | None:intergenic | 45.0% |
! | GAGCAAGATGGGTGCAATTT+TGG | + | chr4.4:1398526-1398545 | MS.gene058594:CDS | 45.0% |
! | TACACTGATAGTGCTGTTGC+CGG | + | chr4.4:1397583-1397602 | MS.gene058594:CDS | 45.0% |
! | TGAGTGGCTGTAGTCTGTTT+TGG | + | chr4.4:1398114-1398133 | MS.gene058594:intron | 45.0% |
!! | AAGCTTGGCCTTTTCACCAA+CGG | + | chr4.4:1398688-1398707 | MS.gene058594:CDS | 45.0% |
!! | AGCTCTGGGAATTGCTCTTA+CGG | + | chr4.4:1397797-1397816 | MS.gene058594:CDS | 45.0% |
!! | ATGTTTCAGAGGGTTAGCTC+TGG | + | chr4.4:1397782-1397801 | MS.gene058594:intron | 45.0% |
!! | CAGTTAAGTTGGCACCTTCA+GGG | + | chr4.4:1399274-1399293 | MS.gene058594:CDS | 45.0% |
!! | CTGGTGATTGGTTTAGAAGC+CGG | - | chr4.4:1395285-1395304 | None:intergenic | 45.0% |
!! | GGACTTGGTGTTATCCATAG+AGG | + | chr4.4:1397221-1397240 | MS.gene058594:CDS | 45.0% |
!! | TACTGCTACTGACTCACGAT+AGG | + | chr4.4:1394747-1394766 | MS.gene058594:intron | 45.0% |
!! | TGGTGATTGGTTTAGAAGCC+GGG | - | chr4.4:1395284-1395303 | None:intergenic | 45.0% |
!! | TGTTTCAGAGGGTTAGCTCT+GGG | + | chr4.4:1397783-1397802 | MS.gene058594:intron | 45.0% |
!! | TTCCCTCAGGAAAGTATCCA+CGG | - | chr4.4:1397064-1397083 | None:intergenic | 45.0% |
!! | TTTGGCTCTACGGACTCTAA+AGG | - | chr4.4:1396623-1396642 | None:intergenic | 45.0% |
!!! | ATCACTGGGTTTTGGCTCTA+CGG | - | chr4.4:1396633-1396652 | None:intergenic | 45.0% |
AATATGCTTGCAACCCCCTC+TGG | - | chr4.4:1396467-1396486 | None:intergenic | 50.0% | |
AATGCATGCTGGAACAACCG+TGG | + | chr4.4:1397044-1397063 | MS.gene058594:CDS | 50.0% | |
AGAGGGGGTTGCAAGCATAT+TGG | + | chr4.4:1396466-1396485 | MS.gene058594:CDS | 50.0% | |
AGATGCTGGATTTCGTCTCC+TGG | + | chr4.4:1395344-1395363 | MS.gene058594:intron | 50.0% | |
AGGACAGAACTAACCTGCTC+TGG | - | chr4.4:1398044-1398063 | None:intergenic | 50.0% | |
AGGACTGCAGTCCTAGCATT+AGG | + | chr4.4:1397999-1398018 | MS.gene058594:CDS | 50.0% | |
AGTATGGGCCTACTCATGGT+TGG | + | chr4.4:1397622-1397641 | MS.gene058594:CDS | 50.0% | |
ATCAGCAATGGCTGTGGATG+AGG | + | chr4.4:1399413-1399432 | MS.gene058594:CDS | 50.0% | |
ATCAGCTAAGGCCAAAGCCA+GGG | + | chr4.4:1398856-1398875 | MS.gene058594:CDS | 50.0% | |
ATTCGAGGAGTCTGCAGTGT+AGG | - | chr4.4:1398170-1398189 | None:intergenic | 50.0% | |
ATTCGCGTGTTGGAACCTTC+AGG | + | chr4.4:1398390-1398409 | MS.gene058594:CDS | 50.0% | |
CAACCGTGGATACTTTCCTG+AGG | + | chr4.4:1397058-1397077 | MS.gene058594:CDS | 50.0% | |
CATGGTGCATGTCTAGGTCT+TGG | + | chr4.4:1397502-1397521 | MS.gene058594:CDS | 50.0% | |
CATTTCTTCCGCCAGCATCA+AGG | - | chr4.4:1398562-1398581 | None:intergenic | 50.0% | |
CCAGAGAAGCCGTGGTTTAA+CGG | - | chr4.4:1397740-1397759 | None:intergenic | 50.0% | |
CCATAGAGGTCATTTGCAGC+AGG | + | chr4.4:1397235-1397254 | MS.gene058594:CDS | 50.0% | |
CCCAAGACTGGAAGCAATTG+TGG | + | chr4.4:1395779-1395798 | MS.gene058594:CDS | 50.0% | |
CCTGCTGCAAATGACCTCTA+TGG | - | chr4.4:1397238-1397257 | None:intergenic | 50.0% | |
CGTGAATCTTCAGGGAGATG+TGG | - | chr4.4:1394409-1394428 | None:intergenic | 50.0% | |
CGTGTATTCCAGGCGACAAT+TGG | + | chr4.4:1398469-1398488 | MS.gene058594:intron | 50.0% | |
CGTGTTGGAACCTTCAGGTA+AGG | + | chr4.4:1398395-1398414 | MS.gene058594:intron | 50.0% | |
CTACGACATCAACTGCTGGT+GGG | + | chr4.4:1399364-1399383 | MS.gene058594:CDS | 50.0% | |
CTCAGCTTTCTTACTAGCCC+TGG | - | chr4.4:1398876-1398895 | None:intergenic | 50.0% | |
CTCGGCAATCCGTTAAACCA+CGG | + | chr4.4:1397728-1397747 | MS.gene058594:intron | 50.0% | |
CTTGGAGCTGATGTAGAGTC+GGG | - | chr4.4:1398932-1398951 | None:intergenic | 50.0% | |
GAAGCTAGTGATTCGCGTGT+TGG | + | chr4.4:1398380-1398399 | MS.gene058594:CDS | 50.0% | |
GACTCACTATCCTATGCCCT+TGG | + | chr4.4:1395436-1395455 | MS.gene058594:CDS | 50.0% | |
GAGGCTGCTGGTATCAGTAT+GGG | + | chr4.4:1397607-1397626 | MS.gene058594:CDS | 50.0% | |
GCATCTACGACATCAACTGC+TGG | + | chr4.4:1399360-1399379 | MS.gene058594:CDS | 50.0% | |
GGAACACTTGTGGAGATCTC+TGG | - | chr4.4:1394470-1394489 | None:intergenic | 50.0% | |
GGACTGCAGTCCTAGCATTA+GGG | + | chr4.4:1398000-1398019 | MS.gene058594:CDS | 50.0% | |
GGTAGTCCATACTCAGAAGG+TGG | + | chr4.4:1397305-1397324 | MS.gene058594:CDS | 50.0% | |
GGTCTGATTCATGCCAACCA+TGG | + | chr4.4:1397344-1397363 | MS.gene058594:CDS | 50.0% | |
GGTGGTAGTCCATACTCAGA+AGG | + | chr4.4:1397302-1397321 | MS.gene058594:CDS | 50.0% | |
GGTTGGAACAGGCAGTGATA+AGG | + | chr4.4:1397639-1397658 | MS.gene058594:CDS | 50.0% | |
GTTGGCATGAATCAGACCGA+GGG | - | chr4.4:1397342-1397361 | None:intergenic | 50.0% | |
TCCAGCCGTTGCACTGAATT+TGG | - | chr4.4:1397204-1397223 | None:intergenic | 50.0% | |
TCCGCCATTGGAACATCATC+TGG | - | chr4.4:1396689-1396708 | None:intergenic | 50.0% | |
TCTACATCAGCTCCAAGTGC+TGG | + | chr4.4:1398935-1398954 | MS.gene058594:CDS | 50.0% | |
TCTACGACATCAACTGCTGG+TGG | + | chr4.4:1399363-1399382 | MS.gene058594:CDS | 50.0% | |
TGAGCAGATGACTCGAGATC+AGG | + | chr4.4:1397854-1397873 | MS.gene058594:CDS | 50.0% | |
TGAGGCTGCTGGTATCAGTA+TGG | + | chr4.4:1397606-1397625 | MS.gene058594:CDS | 50.0% | |
TGCCCTCATAGCAATGGCTA+TGG | + | chr4.4:1398340-1398359 | MS.gene058594:CDS | 50.0% | |
TGCCTGTTCCAACCATGAGT+AGG | - | chr4.4:1397633-1397652 | None:intergenic | 50.0% | |
TGCTGTGGGTATTTCCTGTG+CGG | + | chr4.4:1398244-1398263 | MS.gene058594:CDS | 50.0% | |
TGGGAACTGCCATTGAATGC+AGG | + | chr4.4:1395942-1395961 | MS.gene058594:CDS | 50.0% | |
TGTTCTTGGATGAGCCAGAG+GGG | + | chr4.4:1396450-1396469 | MS.gene058594:CDS | 50.0% | |
TTCTGCTGTCAATGTGCCTG+AGG | + | chr4.4:1396721-1396740 | MS.gene058594:CDS | 50.0% | |
! | AGAGCACCACCTTCTGAGTA+TGG | - | chr4.4:1397314-1397333 | None:intergenic | 50.0% |
! | CAGGGCTAGTAAGAAAGCTG+AGG | + | chr4.4:1398874-1398893 | MS.gene058594:CDS | 50.0% |
! | GATGATGTTCCAATGGCGGA+CGG | + | chr4.4:1396689-1396708 | MS.gene058594:CDS | 50.0% |
! | GCAGTTGATGTCGTAGATGC+AGG | - | chr4.4:1399360-1399379 | None:intergenic | 50.0% |
! | GGAGAGAGCGTGAATCTTCA+GGG | - | chr4.4:1394417-1394436 | None:intergenic | 50.0% |
! | TGGAGAGAGCGTGAATCTTC+AGG | - | chr4.4:1394418-1394437 | None:intergenic | 50.0% |
! | TGGCAGTTCCCATAGCTTGT+TGG | - | chr4.4:1395934-1395953 | None:intergenic | 50.0% |
!! | ATGATGTTCCAATGGCGGAC+GGG | + | chr4.4:1396690-1396709 | MS.gene058594:CDS | 50.0% |
!! | ATGGGTGCAATTTTGGCCTC+CGG | + | chr4.4:1398533-1398552 | MS.gene058594:CDS | 50.0% |
!! | CCAGTTAAGTTGGCACCTTC+AGG | + | chr4.4:1399273-1399292 | MS.gene058594:CDS | 50.0% |
!! | CCTGAAGGTGCCAACTTAAC+TGG | - | chr4.4:1399276-1399295 | None:intergenic | 50.0% |
!! | GGTCTTGGATTGGCATCTCT+AGG | + | chr4.4:1397517-1397536 | MS.gene058594:CDS | 50.0% |
!! | TCAGCTCCAAGTGCTGGAAA+AGG | + | chr4.4:1398941-1398960 | MS.gene058594:CDS | 50.0% |
!! | TGGCATGTATGCACTGGCTT+TGG | + | chr4.4:1397896-1397915 | MS.gene058594:CDS | 50.0% |
AAACAGGGGACCAGCTCCAA+GGG | - | chr4.4:1395455-1395474 | None:intergenic | 55.0% | |
ACTAAGACCTGTACCCGCAC+AGG | - | chr4.4:1398261-1398280 | None:intergenic | 55.0% | |
ACTGATACCAGCAGCCTCAC+CGG | - | chr4.4:1397605-1397624 | None:intergenic | 55.0% | |
AGCAAGAGTGGTTCCTGCTC+AGG | + | chr4.4:1399212-1399231 | MS.gene058594:CDS | 55.0% | |
CATCAGCTAAGGCCAAAGCC+AGG | + | chr4.4:1398855-1398874 | MS.gene058594:CDS | 55.0% | |
CCGTTAAACCACGGCTTCTC+TGG | + | chr4.4:1397737-1397756 | MS.gene058594:intron | 55.0% | |
CTATCCTATGCCCTTGGAGC+TGG | + | chr4.4:1395442-1395461 | MS.gene058594:CDS | 55.0% | |
GAAGGATGGAGAAGCCATGC+AGG | + | chr4.4:1398979-1398998 | MS.gene058594:CDS | 55.0% | |
GAGGTCATTTGCAGCAGGGA+AGG | + | chr4.4:1397240-1397259 | MS.gene058594:CDS | 55.0% | |
GCCAAATTCAGTGCAACGGC+TGG | + | chr4.4:1397200-1397219 | MS.gene058594:CDS | 55.0% | |
GCTGCTCCGTAACGAACATG+TGG | - | chr4.4:1398221-1398240 | None:intergenic | 55.0% | |
GCTGTACTCTGATCCAGAGC+AGG | + | chr4.4:1398028-1398047 | MS.gene058594:CDS | 55.0% | |
GCTGTGGGTATTTCCTGTGC+GGG | + | chr4.4:1398245-1398264 | MS.gene058594:CDS | 55.0% | |
GGCACATTGACAGCAGAAGC+TGG | - | chr4.4:1396719-1396738 | None:intergenic | 55.0% | |
GGCCTACTCATGGTTGGAAC+AGG | + | chr4.4:1397628-1397647 | MS.gene058594:CDS | 55.0% | |
GGCTTCTCCATCCTTCTCAC+TGG | - | chr4.4:1398975-1398994 | None:intergenic | 55.0% | |
GGTATTTCCTGTGCGGGTAC+AGG | + | chr4.4:1398251-1398270 | MS.gene058594:CDS | 55.0% | |
GGTGGTGCTCTTTATGCCCT+CGG | + | chr4.4:1397323-1397342 | MS.gene058594:CDS | 55.0% | |
GGTTGGCATGAATCAGACCG+AGG | - | chr4.4:1397343-1397362 | None:intergenic | 55.0% | |
GTGGGAACAGTCGTAGGCTT+GGG | - | chr4.4:1398794-1398813 | None:intergenic | 55.0% | |
GTTCTTGGATGAGCCAGAGG+GGG | + | chr4.4:1396451-1396470 | MS.gene058594:CDS | 55.0% | |
TATCAGAGCCAGAGAAGCCG+TGG | - | chr4.4:1397748-1397767 | None:intergenic | 55.0% | |
TCCGCCAGCATCAAGGATTC+CGG | - | chr4.4:1398555-1398574 | None:intergenic | 55.0% | |
TCCGGAATCCTTGATGCTGG+CGG | + | chr4.4:1398551-1398570 | MS.gene058594:CDS | 55.0% | |
TCGTGCTGCGCAAGCTATCA+CGG | - | chr4.4:1397391-1397410 | None:intergenic | 55.0% | |
TGAGCAGGAACCACTCTTGC+TGG | - | chr4.4:1399213-1399232 | None:intergenic | 55.0% | |
TGCGGGTACAGGTCTTAGTG+AGG | + | chr4.4:1398262-1398281 | MS.gene058594:CDS | 55.0% | |
TGGGAACAGTCGTAGGCTTG+GGG | - | chr4.4:1398793-1398812 | None:intergenic | 55.0% | |
TTACGGAGCAGCTCTTGCTG+TGG | + | chr4.4:1398229-1398248 | MS.gene058594:CDS | 55.0% | |
TTCAGTGCAACGGCTGGACT+TGG | + | chr4.4:1397206-1397225 | MS.gene058594:CDS | 55.0% | |
! | ACATCAACTGCTGGTGGGTC+AGG | + | chr4.4:1399369-1399388 | MS.gene058594:CDS | 55.0% |
! | GCAAGAACTTCAGGCTCGGT+AGG | - | chr4.4:1399324-1399343 | None:intergenic | 55.0% |
! | GTAGTGGTGGGAACAGTCGT+AGG | - | chr4.4:1398800-1398819 | None:intergenic | 55.0% |
! | TACGGAGCAGCTCTTGCTGT+GGG | + | chr4.4:1398230-1398249 | MS.gene058594:CDS | 55.0% |
! | TCAGGGTGCCCTCATAGCAA+TGG | + | chr4.4:1398334-1398353 | MS.gene058594:CDS | 55.0% |
! | TGATAGTGCTGTTGCCGGTG+AGG | + | chr4.4:1397588-1397607 | MS.gene058594:CDS | 55.0% |
!! | GCACTGGCTTTGGCGTATAG+CGG | + | chr4.4:1397906-1397925 | MS.gene058594:CDS | 55.0% |
!! | TGATGTTCCAATGGCGGACG+GGG | + | chr4.4:1396691-1396710 | MS.gene058594:CDS | 55.0% |
ACGACGTTGGTCAGCTCAGC+CGG | + | chr4.4:1394356-1394375 | MS.gene058594:CDS | 60.0% | |
AGTCCCACCCTGAGGCAAGT+AGG | - | chr4.4:1397279-1397298 | None:intergenic | 60.0% | |
ATGGCGCCCTACTTGCCTCA+GGG | + | chr4.4:1397269-1397288 | MS.gene058594:CDS | 60.0% | |
CAAACAGGGGACCAGCTCCA+AGG | - | chr4.4:1395456-1395475 | None:intergenic | 60.0% | |
CAGCATGGCCAACATGCCAC+CGG | - | chr4.4:1394378-1394397 | None:intergenic | 60.0% | |
CTTGCGCAGCACGACTGTTG+AGG | + | chr4.4:1397397-1397416 | MS.gene058594:CDS | 60.0% | |
GATGTGGGACTCGTGCAGCA+TGG | - | chr4.4:1394393-1394412 | None:intergenic | 60.0% | |
GCAGCAGGGAAGGTCACTGA+TGG | + | chr4.4:1397250-1397269 | MS.gene058594:CDS | 60.0% | |
GCCAGCATCAAGGATTCCGG+AGG | - | chr4.4:1398552-1398571 | None:intergenic | 60.0% | |
GCCTCCGGAATCCTTGATGC+TGG | + | chr4.4:1398548-1398567 | MS.gene058594:CDS | 60.0% | |
GGTGGGAACAGTCGTAGGCT+TGG | - | chr4.4:1398795-1398814 | None:intergenic | 60.0% | |
GTCCCACCCTGAGGCAAGTA+GGG | - | chr4.4:1397278-1397297 | None:intergenic | 60.0% | |
TACTTGCCTCAGGGTGGGAC+TGG | + | chr4.4:1397278-1397297 | MS.gene058594:CDS | 60.0% | |
TGCTGCGCAAGCTATCACGG+AGG | - | chr4.4:1397388-1397407 | None:intergenic | 60.0% | |
ACGTTGGTCAGCTCAGCCGG+TGG | + | chr4.4:1394359-1394378 | MS.gene058594:CDS | 65.0% | |
CAGCTCAGCCGGTGGCATGT+TGG | + | chr4.4:1394367-1394386 | MS.gene058594:CDS | 65.0% | |
CGCCCTACTTGCCTCAGGGT+GGG | + | chr4.4:1397273-1397292 | MS.gene058594:CDS | 65.0% | |
GATGGCGCCCTACTTGCCTC+AGG | + | chr4.4:1397268-1397287 | MS.gene058594:CDS | 65.0% | |
TTGCCTCAGGGTGGGACTGG+TGG | + | chr4.4:1397281-1397300 | MS.gene058594:CDS | 65.0% | |
! | ACTGCTGGTGGGTCAGGACC+AGG | + | chr4.4:1399375-1399394 | MS.gene058594:CDS | 65.0% |
! | GGGACCAGCTCCAAGGGCAT+AGG | - | chr4.4:1395449-1395468 | None:intergenic | 65.0% |
CCACCACCAGTCCCACCCTG+AGG | - | chr4.4:1397287-1397306 | None:intergenic | 70.0% | |
GCGCCCTACTTGCCTCAGGG+TGG | + | chr4.4:1397272-1397291 | MS.gene058594:CDS | 70.0% | |
GCTGTTGCCGGTGAGGCTGC+TGG | + | chr4.4:1397595-1397614 | MS.gene058594:CDS | 70.0% | |
! | CCTCAGGGTGGGACTGGTGG+TGG | + | chr4.4:1397284-1397303 | MS.gene058594:CDS | 70.0% |
! | GCTGGTTCCCCGTCCGCCAT+TGG | - | chr4.4:1396701-1396720 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 1394350 | 1399473 | 1394350 | ID=MS.gene058594 |
chr4.4 | mRNA | 1394350 | 1399473 | 1394350 | ID=MS.gene058594.t1;Parent=MS.gene058594 |
chr4.4 | exon | 1394350 | 1394495 | 1394350 | ID=MS.gene058594.t1.exon1;Parent=MS.gene058594.t1 |
chr4.4 | CDS | 1394350 | 1394495 | 1394350 | ID=cds.MS.gene058594.t1;Parent=MS.gene058594.t1 |
chr4.4 | exon | 1395038 | 1395107 | 1395038 | ID=MS.gene058594.t1.exon2;Parent=MS.gene058594.t1 |
chr4.4 | CDS | 1395038 | 1395107 | 1395038 | ID=cds.MS.gene058594.t1;Parent=MS.gene058594.t1 |
chr4.4 | exon | 1395409 | 1395514 | 1395409 | ID=MS.gene058594.t1.exon3;Parent=MS.gene058594.t1 |
chr4.4 | CDS | 1395409 | 1395514 | 1395409 | ID=cds.MS.gene058594.t1;Parent=MS.gene058594.t1 |
chr4.4 | exon | 1395715 | 1395817 | 1395715 | ID=MS.gene058594.t1.exon4;Parent=MS.gene058594.t1 |
chr4.4 | CDS | 1395715 | 1395817 | 1395715 | ID=cds.MS.gene058594.t1;Parent=MS.gene058594.t1 |
chr4.4 | exon | 1395910 | 1396078 | 1395910 | ID=MS.gene058594.t1.exon5;Parent=MS.gene058594.t1 |
chr4.4 | CDS | 1395910 | 1396078 | 1395910 | ID=cds.MS.gene058594.t1;Parent=MS.gene058594.t1 |
chr4.4 | exon | 1396377 | 1396849 | 1396377 | ID=MS.gene058594.t1.exon6;Parent=MS.gene058594.t1 |
chr4.4 | CDS | 1396377 | 1396849 | 1396377 | ID=cds.MS.gene058594.t1;Parent=MS.gene058594.t1 |
chr4.4 | exon | 1396954 | 1397089 | 1396954 | ID=MS.gene058594.t1.exon7;Parent=MS.gene058594.t1 |
chr4.4 | CDS | 1396954 | 1397089 | 1396954 | ID=cds.MS.gene058594.t1;Parent=MS.gene058594.t1 |
chr4.4 | exon | 1397173 | 1397418 | 1397173 | ID=MS.gene058594.t1.exon8;Parent=MS.gene058594.t1 |
chr4.4 | CDS | 1397173 | 1397418 | 1397173 | ID=cds.MS.gene058594.t1;Parent=MS.gene058594.t1 |
chr4.4 | exon | 1397493 | 1397713 | 1397493 | ID=MS.gene058594.t1.exon9;Parent=MS.gene058594.t1 |
chr4.4 | CDS | 1397493 | 1397713 | 1397493 | ID=cds.MS.gene058594.t1;Parent=MS.gene058594.t1 |
chr4.4 | exon | 1397791 | 1398049 | 1397791 | ID=MS.gene058594.t1.exon10;Parent=MS.gene058594.t1 |
chr4.4 | CDS | 1397791 | 1398049 | 1397791 | ID=cds.MS.gene058594.t1;Parent=MS.gene058594.t1 |
chr4.4 | exon | 1398179 | 1398411 | 1398179 | ID=MS.gene058594.t1.exon11;Parent=MS.gene058594.t1 |
chr4.4 | CDS | 1398179 | 1398411 | 1398179 | ID=cds.MS.gene058594.t1;Parent=MS.gene058594.t1 |
chr4.4 | exon | 1398481 | 1399000 | 1398481 | ID=MS.gene058594.t1.exon12;Parent=MS.gene058594.t1 |
chr4.4 | CDS | 1398481 | 1399000 | 1398481 | ID=cds.MS.gene058594.t1;Parent=MS.gene058594.t1 |
chr4.4 | exon | 1399150 | 1399473 | 1399150 | ID=MS.gene058594.t1.exon13;Parent=MS.gene058594.t1 |
chr4.4 | CDS | 1399150 | 1399473 | 1399150 | ID=cds.MS.gene058594.t1;Parent=MS.gene058594.t1 |
Gene Sequence |
Protein sequence |